CmaCh13G001150 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGAGAAATGGAATCCACCAAAGAAGGAAGGTTCAGGAAGTAGTTACCACCATTCTTCATCGTTCATGAGGAGTGGCTCGACCTCCAAATCGCCATTGTTGCGATGTTCTTCACAGAAAAGCTTCCCAGCTTCCAATTCCAAGAGCCCCCACGATCTCCCTCGAAGTTACTCGCAGAAGAGCTCTTCTTCCATAGGAAGAAAGTACAGCAGCTTAGCCAAGGAACAGAAGGCCCGATTCTACATCATGAGACGCTGCGTTGCAATGCTCGTCTGTTGGCACAAACATGGCGATTCGTAA ATGGACGAGAAATGGAATCCACCAAAGAAGGAAGGTTCAGGAAGTAGTTACCACCATTCTTCATCGTTCATGAGGAGTGGCTCGACCTCCAAATCGCCATTGTTGCGATGTTCTTCACAGAAAAGCTTCCCAGCTTCCAATTCCAAGAGCCCCCACGATCTCCCTCGAAGTTACTCGCAGAAGAGCTCTTCTTCCATAGGAAGAAAGTACAGCAGCTTAGCCAAGGAACAGAAGGCCCGATTCTACATCATGAGACGCTGCGTTGCAATGCTCGTCTGTTGGCACAAACATGGCGATTCGTAA ATGGACGAGAAATGGAATCCACCAAAGAAGGAAGGTTCAGGAAGTAGTTACCACCATTCTTCATCGTTCATGAGGAGTGGCTCGACCTCCAAATCGCCATTGTTGCGATGTTCTTCACAGAAAAGCTTCCCAGCTTCCAATTCCAAGAGCCCCCACGATCTCCCTCGAAGTTACTCGCAGAAGAGCTCTTCTTCCATAGGAAGAAAGTACAGCAGCTTAGCCAAGGAACAGAAGGCCCGATTCTACATCATGAGACGCTGCGTTGCAATGCTCGTCTGTTGGCACAAACATGGCGATTCGTAA MDEKWNPPKKEGSGSSYHHSSSFMRSGSTSKSPLLRCSSQKSFPASNSKSPHDLPRSYSQKSSSSIGRKYSSLAKEQKARFYIMRRCVAMLVCWHKHGDS
BLAST of CmaCh13G001150 vs. TrEMBL
Match: A0A0A0M0J4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G524140 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 3.8e-41 Identity = 94/106 (88.68%), Postives = 97/106 (91.51%), Query Frame = 1
BLAST of CmaCh13G001150 vs. TrEMBL
Match: A0A067L1G2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02962 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 4.3e-24 Identity = 79/111 (71.17%), Postives = 82/111 (73.87%), Query Frame = 1
BLAST of CmaCh13G001150 vs. TrEMBL
Match: B9S3H4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0734910 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.6e-23 Identity = 74/107 (69.16%), Postives = 79/107 (73.83%), Query Frame = 1
BLAST of CmaCh13G001150 vs. TrEMBL
Match: A0A061H013_THECC (ROTUNDIFOLIA like 4 (Fragment) OS=Theobroma cacao GN=TCM_041800 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.1e-22 Identity = 76/109 (69.72%), Postives = 80/109 (73.39%), Query Frame = 1
BLAST of CmaCh13G001150 vs. TrEMBL
Match: A0A0D2QCJ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G097500 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.2e-21 Identity = 74/109 (67.89%), Postives = 78/109 (71.56%), Query Frame = 1
BLAST of CmaCh13G001150 vs. TAIR10
Match: AT2G29125.1 (AT2G29125.1 ROTUNDIFOLIA like 2) HSP 1 Score: 97.8 bits (242), Expect = 4.0e-21 Identity = 68/115 (59.13%), Postives = 79/115 (68.70%), Query Frame = 1
BLAST of CmaCh13G001150 vs. TAIR10
Match: AT1G07490.1 (AT1G07490.1 ROTUNDIFOLIA like 3) HSP 1 Score: 86.7 bits (213), Expect = 9.1e-18 Identity = 60/108 (55.56%), Postives = 70/108 (64.81%), Query Frame = 1
BLAST of CmaCh13G001150 vs. TAIR10
Match: AT5G59510.1 (AT5G59510.1 ROTUNDIFOLIA like 5) HSP 1 Score: 63.2 bits (152), Expect = 1.1e-10 Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 1
BLAST of CmaCh13G001150 vs. TAIR10
Match: AT3G46613.1 (AT3G46613.1 ROTUNDIFOLIA like 4) HSP 1 Score: 56.2 bits (134), Expect = 1.3e-08 Identity = 39/90 (43.33%), Postives = 47/90 (52.22%), Query Frame = 1
BLAST of CmaCh13G001150 vs. TAIR10
Match: AT2G36985.1 (AT2G36985.1 DVL family protein) HSP 1 Score: 49.7 bits (117), Expect = 1.2e-06 Identity = 19/31 (61.29%), Postives = 27/31 (87.10%), Query Frame = 1
BLAST of CmaCh13G001150 vs. NCBI nr
Match: gi|659115242|ref|XP_008457457.1| (PREDICTED: uncharacterized protein LOC103497141 [Cucumis melo]) HSP 1 Score: 176.4 bits (446), Expect = 2.5e-41 Identity = 94/106 (88.68%), Postives = 98/106 (92.45%), Query Frame = 1
BLAST of CmaCh13G001150 vs. NCBI nr
Match: gi|449472053|ref|XP_004153482.1| (PREDICTED: uncharacterized protein LOC101207628 [Cucumis sativus]) HSP 1 Score: 175.3 bits (443), Expect = 5.5e-41 Identity = 94/106 (88.68%), Postives = 97/106 (91.51%), Query Frame = 1
BLAST of CmaCh13G001150 vs. NCBI nr
Match: gi|802563617|ref|XP_012066989.1| (PREDICTED: putative protein TPRXL [Jatropha curcas]) HSP 1 Score: 118.6 bits (296), Expect = 6.1e-24 Identity = 79/111 (71.17%), Postives = 82/111 (73.87%), Query Frame = 1
BLAST of CmaCh13G001150 vs. NCBI nr
Match: gi|1000963338|ref|XP_015575499.1| (PREDICTED: bromodomain-containing protein DDB_G0270170 [Ricinus communis]) HSP 1 Score: 116.7 bits (291), Expect = 2.3e-23 Identity = 74/107 (69.16%), Postives = 79/107 (73.83%), Query Frame = 1
BLAST of CmaCh13G001150 vs. NCBI nr
Match: gi|590589141|ref|XP_007016365.1| (ROTUNDIFOLIA like 4, partial [Theobroma cacao]) HSP 1 Score: 114.0 bits (284), Expect = 1.5e-22 Identity = 76/109 (69.72%), Postives = 80/109 (73.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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