CmaCh12G007320 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAAAAAATTCATTCAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCCGTTGAATTTCAAGTAGTCAGTTTCACCAATAAGATACGAAGACTTACTTCCCATTTGGAATTGCACAAAAAAGACTATTTATCTCAAAGAGGTCTACGTAAAATTCTCGGAAAACGCCAACGATTACTTTCTTATTTATCAAAGATAAATAAAATGCGTTATAAAGAATTAATTAATCAATTGGATATTCGGGAGTCAAAAACTCAGTAATTTTAAAAGTAATTTTTAATTATTTGATTTATTAGATCTTGAATTTTTATGAACTTATTTGCATTTTCAGCAATTCATGGAAAGCTGAATCGAGGAAAAACTTATGAATGGACCAGCTACAAGAAAAGACCTCATGATAGTCAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATTTACACAGAGGGATGGAAAAAATTGCAGAAAACCGAACAATTATACAATATCTACCTTATGTAACACGTTGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACTGTAAATGGTCCAGAACTGTTGGGAAATATTCAAGTACCTAAAAGAGCCAGCTATATCAGAGTAATTATGTTGGAATTGAGTCGTATAGCTTCTCATCTGTTATGGCTTGGCCCTTTTATGGCGGATATTGGCGCACAGACTCCCTTCTTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTATTCGAAGCAGCCACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGGGGAGTCGCGGCTGATCTACCGGGTTTGGTTGGGTTAACAATCCAACTAGAAGAATTTTTAGAATACTTATGGATTTCGAGAAAAATAATATTAAAATATTCGAAAAATGAAAAATTACAAAAATACCCCTTAAAATATGAATAATTACGAAAAATGTCATTCTGCTCAAAATCACGACTTCAACCGCCACCTCCTGCACAATCCATCAAATCTCAAAATCCGGCCATTGGATCTTCTCCAAAATTAGAGACAAGTTAAAATGTTTGTAAATCACTACATCCAAATTCAAATTGGAAGTTGTTAGCTCGCTTATCGAACAAGATATTTCTGAAGGATTATCCAAAAAAATTTAATCTCCAAATCTCGATGATAATGGAGGTTTCATCGTCGGTATAAGCTTCCCCTATAAATTTTGAAGTTGGGACAATAGCATAGAACAAGAATCGAATGCTGCAATAAGTGTTTAAATTTTGTGCTTCTACTCTCGAATTTCTTTTAAACTCGAGAGCAATTCTCCACCATTTCTCTTTAAACTTGTTCCAACAATTTCTAAACAAGATTACGCACAAGTTTTGGGAAGAAATCGAGTGCTGAAAGTGCCTATAAACCATTCCCCCCCAATCCAATATGCATTCGAAGAGCTTCAAGGAAAACTCGAAAATCCAATCCGAGGATATACGATAATTGGCCGAGCAAGAAAAATCTCAATCAGTTTCTGCACCTCAAGAACGTGCCTAATTGAAGGAAATTCGTTTCACGTAAAATTTAGGGGTAAGTATCAAATTCTTATATACCGTCCCTTTAACCATTTAAAATAATAATAATAAATTAATTAAAATTAAAAAAAAAAAAACAACTTTTTCCCACAATTATCTCTCATCAACCCCGGTAACAACAAAAAGAAAAAGAAAAACAAGTGAGATTTATTTGAGAAAAAAAAAAAAGAATGATCTTTAATCAATTGAGATTCAGCTAAAGATTTCCTTAAAGATAGATCTGATTATATATTAAATCTCATTTCCTTTTATCTTATTTATAGAAATCACAACCAATTAGATCTTCATTTAATTATTACAATGGTCTAGATTTGACTTAGAAACTAAATGTCAATCATTTATACAATTCTAGTAAATCACTCCAAATTAGTAATATTAGATCAAATTTTTATCAGTAGCCAAATGAATAGATAAAGATAGAATGCCAAAAAAAACTTCGGGAGACACTGAGATAAGGAAAGATTTGGAAACAGAGACGGAGATACACAGATCCACCTGAAATTTGGAATATATAAGAACAAAATTAAAAGTATAAAAAAAGAAAGAATTAGGGATAACAAAATTAAAAATTTAACCGATAAAAAAAAAAAAAAAGAAGATTAGGGAATTAAAAGCTGAGAAAAGCNAATGAAAAGACTGATAAAAAAAAAGAATTAAAAGGCCACCGATAAAAAAAAGAATTAAAAGACAACCAATAAAAAAAGAATTAAAAGGCAACAGATAAAAAATAAAATTAGGAAATTAAAAACCACACACTAAATAAGAGAAAGTAAATAGAGGGTAAATATAGAGTAGTATAACTTAAAGAGACCTAACATAACGTTCTATGTTTTTAACATATAACATTTCATCATATACACATCATACCATGACATATTGCATCACAATATAACATATCATAAACAAGTCATAACGTAAACACTTCGTAGTCATATTATTCTCTAACTTATCATAGCCTTAACGTTCTCATACCTATCATAGACATATCATCACGTGAACGTACCTTAGTCATATCATCACAAGAACTTAACCTAACACTATTGTTCTATCAATCCTAACGCTATCGTTCTATCAATCTATCACAAACCTATTCCTTTATACCCGTAACCTAACCATATTCTTCCATCAATCTCTCTTATCCATATCACTCTGGTATGTAACCTAACCTTAACGTTTCATGAACGTATTTTACTCCTATCATTACATCTCGTTTTGTGCATTCTTCTTGTATCCTATCTCAAACATATCCTTGAACACATCGTACAGTAATTATTATCATACAATTCACATATCATAACGTATACATAACATATAGGAAGCATATTGATCCACAGACAATTCACACATATTGATAACATAAGGAACCACTACAAGGGGAGTAAGATTCGGATTACCTTGTAATCTCAAGGCAAAAACATTGTTTGAGATTCGAATCACTCCACAAGCAAGATCGATCATGTCTAGCTTGAATGATTCTTGTTGACCAAATATCTCAAGGCAACAACACTTGCTTGAGATTCGAATCACTCCACAAGCAAGATTGATCATGTCGAGCTTGAATGATTCTACATGCAACCTAAACTACATAAAATTGCAAAGAAACTTAGTCATTGGCTAAAGAAGAGCACAAATGATTCTTGTACTATATTTTCCAAGTCTACTTACAAATACAACATAGATGGCTTTATATAGCCTCAAAATGAAGCTACTAAATGCATTCCAAGAGTTAGTAACATTCATATTTAATGGTCTTAATTAACCATTATGTAATTGTAACTTAAATAAATTAAAAGTCTTAAAATACATTAATGATATACAATAGCTCTAAATTACTCTAAATTGTAGTCCACCCAAAATTCAAAACATGAAACTTCATTTTTCTTCACATCTTCTTTGAAGCATATTGTATGATTGATGTCTCTTGGTTCATATCACATATCAATATATATGACACGTGCAGAACCACAGGGCATGTGTTAACATCAAATATAACCATGCCTATAGTAAAGTCACTTACCTGGCTAGCTTAAGTCGTTGTCACGAATACATCTTTAATGAAAGTTCGATTCCATCCTTTGAAAACCAAGTCAACCTATATAAGCCCATGACATTAGTTTCAGGTTTGAACTCTACCATATTATTTCTCTACTTTATTGGTACTTTATTGGTCCATTGTTAAAAGTCTTGAAATGTTATATATATATATATATATAAAATTATATTTTTATTAAAAATCTTATTTTTCATGGTTTGTGTTGTATAAGAAAGTAGACATAGCTATTTCAAGTTATTCTCGGCTTTACTAGTCTGTATTTACCTTTCCCTCTCTATTTAGTTTGCGGTTTTTAATTCCCTAGTCTTTTTTTTATCTGTTGCCTTTTAATTCTGTTCTCATGTATTCCAAATTTCTAGTGTATCCTATAGAAGTTTTCTTGTCATTCAATCCTTAATCTATTCATTTGACTACCAATAAAAATTTAATCCATTTCCAAATCTTTCCTTATCTCACTGTTTCCTATACATAAGTTTTCTTGGTCATTCTATCCTTAATCTATTCATTTGGCTACCAATAAAAATTTAATCTAATATTACTAATCTAACGTGATTTACTAGAATCGTATAAATGATTGATAATTAGTTTCTAACTCAAAACTAGACCATTGTAATAATTCAATGAAGATTTTACTATAATTGGTTGTGATTTCTAAAAAAGATAAAAGAAAATGAAGATTTAATATATATTGATAAGATCTCTTAACTGGGTAAGGGCGATTATTTTTTTTTTTTCCTCTAAGTAAATCTGACCATTATTGTTTTTCTTTTTCTTTTTGGAGTAACTGCTCATTTTCTAGCATAGGATGGGCTGAGTAAGGTAATTGTGGGAAGGATTAGAGGTTAGTGGAGAGAAGTTGAGAAATGTTTTTTTTTTTAATTTTTTAATTGTAATTAATTAATTAATTTATTATTATTATTATTTTAACTTTTTTTTTTTTTAATTTCTTTATTTATTTTTGGGCTATTACATTATATACCTCTCAAAGAAACTTTTGTACTCGAAAGTGTTTTAATCTTGGAATAACTCGGGTCGTTATTCTAAGAGTTCTTTGTCAAGTCTTCAAGTACCACTAAGTAAAAATTCTTAACAAGTATACCCTAATTCATATGAGTCATAAACATTTATTTGCATGCATAAAACTTTCATAAGCCTATCACTTTGTATTCCTAAAATCTTTGATTCCTTATAAGGTGTCTTCTCATATAGTTAGTATTTTAAATCTTAACTCATACTCCAAAAGAGTCTTTTTGGTCATTTACCCCCAAATCTTGGTTTAATTCTTCAACATATTCCAATGGCCTTGTAATTTTGTGTAATCCCTTTACACCGTGACATAAGACTCCTCATCAAATTTCATGTCAATTAGAGGTCACTTTGGTCATAAACTAGTGGTACGTAATTATAGGGGCATTTAGTCATTTTACACCTACACTTGGTTTAGCCCGTTATCATAACCTAATGGTCACCAAATTTTATACATAACCTTATCATGCCATATTGAATATTTTTCTAAAATTTCATGGACAACATAATTCATCTAAAGTTTGTGGCTCAGACACTTCATTGAAATAAATGTTGTACAATAAGGTTGGAAAACTCACATAGTTCCTCACTTTTTTTTTTTTTTTTTAAGTTTTATTTTTATTTTTTATACTATGATTCCATCTACTAGATCAATAGTTTTACTAGTATCTGATTTACATTATTCTCCAAATCAAATTCTCTACACTTAGCTAAAGGTTCACTAGATCTGTTTGTCCATACATCCTCAAAATCTCATTTTAAAATACGGGATCTCCACCTACACAAGAAAATTGTTGATAAAACTCCAAAATTGCACTTTCTTTTTTATCTAATTTTTTTTTCTCTCCTTATCATTAAAGAAAGACAGAAAAATTTCAGGGTAGAAACCTTCTCAAGAATTTCTCTTAAAATTTGA ATGGTAAAAAATTCATTCAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCCGTTGAATTTCAAGTAGTCAGTTTCACCAATAAGATACGAAGACTTACTTCCCATTTGGAATTGCACAAAAAAGACTATTTATCTCAAAGAGGTCTACCTACAAGAAAAGACCTCATGATAGTCAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATTTACACAGAGGGATGGAAAAAATTGCAGAAAACCGAACAATTATACAATATCTACCTTATGTAACACGTTGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACTGTAAATGGTCCAGAACTGTTGGGAAATATTCAAGTACCTAAAAGAGCCAGCTATATCAGAGTAATTATGTTGGAATTGAGTCGTATAGCTTCTCATCTGTTATGGCTTGGCCCTTTTATGGCGGATATTGGCGCACAGACTCCCTTCTTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTATTCGAAGCAGCCACCGAAAGACAGAAAAATTTCAGGGTAGAAACCTTCTCAAGAATTTCTCTTAAAATTTGA ATGGTAAAAAATTCATTCAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCCGTTGAATTTCAAGTAGTCAGTTTCACCAATAAGATACGAAGACTTACTTCCCATTTGGAATTGCACAAAAAAGACTATTTATCTCAAAGAGGTCTACCTACAAGAAAAGACCTCATGATAGTCAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATTTACACAGAGGGATGGAAAAAATTGCAGAAAACCGAACAATTATACAATATCTACCTTATGTAACACGTTGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACTGTAAATGGTCCAGAACTGTTGGGAAATATTCAAGTACCTAAAAGAGCCAGCTATATCAGAGTAATTATGTTGGAATTGAGTCGTATAGCTTCTCATCTGTTATGGCTTGGCCCTTTTATGGCGGATATTGGCGCACAGACTCCCTTCTTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTATTCGAAGCAGCCACCGAAAGACAGAAAAATTTCAGGGTAGAAACCTTCTCAAGAATTTCTCTTAAAATTTGA MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLPTRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPELLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATERQKNFRVETFSRISLKI
BLAST of CmaCh12G007320 vs. Swiss-Prot
Match: NDHH_CUCSA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus GN=ndhH PE=3 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.7e-79 Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 1
BLAST of CmaCh12G007320 vs. Swiss-Prot
Match: NDHH_MANES (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Manihot esculenta GN=ndhH PE=3 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 5.0e-79 Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 1
BLAST of CmaCh12G007320 vs. Swiss-Prot
Match: NDHH_EUCGG (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=ndhH PE=3 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 5.0e-79 Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 1
BLAST of CmaCh12G007320 vs. Swiss-Prot
Match: NDHH_OENEH (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera elata subsp. hookeri GN=ndhH PE=3 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 8.4e-79 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 1
BLAST of CmaCh12G007320 vs. Swiss-Prot
Match: NDHH_OENAR (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera argillicola GN=ndhH PE=3 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 8.4e-79 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 1
BLAST of CmaCh12G007320 vs. TrEMBL
Match: M7ZI22_TRIUA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Triticum urartu GN=TRIUR3_02235 PE=3 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 6.3e-89 Identity = 171/223 (76.68%), Postives = 180/223 (80.72%), Query Frame = 1
BLAST of CmaCh12G007320 vs. TrEMBL
Match: A0A0S2IES7_9ROSI (NADH-quinone oxidoreductase subunit D OS=Cucurbita ecuadorensis GN=ndhH PE=3 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 3.8e-78 Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 1
BLAST of CmaCh12G007320 vs. TrEMBL
Match: A0A0S2IFG8_9ROSI (NADH-quinone oxidoreductase subunit D OS=Cucurbita okeechobeensis GN=ndhH PE=3 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 3.8e-78 Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 1
BLAST of CmaCh12G007320 vs. TrEMBL
Match: A0A0S2IE70_9ROSI (NADH-quinone oxidoreductase subunit D OS=Cucurbita argyrosperma subsp. sororia GN=ndhH PE=3 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 3.8e-78 Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 1
BLAST of CmaCh12G007320 vs. TrEMBL
Match: A0A0S2IEV6_9ROSI (NADH-quinone oxidoreductase subunit D OS=Cucurbita ficifolia GN=ndhH PE=3 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 3.8e-78 Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 1
BLAST of CmaCh12G007320 vs. TAIR10
Match: ATCG01110.1 (ATCG01110.1 NAD(P)H dehydrogenase subunit H) HSP 1 Score: 288.1 bits (736), Expect = 4.5e-78 Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 1
BLAST of CmaCh12G007320 vs. TAIR10
Match: ATMG00510.1 (ATMG00510.1 NADH dehydrogenase subunit 7) HSP 1 Score: 124.4 bits (311), Expect = 8.5e-29 Identity = 62/133 (46.62%), Postives = 84/133 (63.16%), Query Frame = 1
BLAST of CmaCh12G007320 vs. TAIR10
Match: ATCG01120.1 (ATCG01120.1 chloroplast ribosomal protein S15) HSP 1 Score: 74.7 bits (182), Expect = 7.7e-14 Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 1
BLAST of CmaCh12G007320 vs. NCBI nr
Match: gi|474239245|gb|EMS59732.1| (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Triticum urartu]) HSP 1 Score: 335.1 bits (858), Expect = 9.0e-89 Identity = 171/223 (76.68%), Postives = 180/223 (80.72%), Query Frame = 1
BLAST of CmaCh12G007320 vs. NCBI nr
Match: gi|952954541|gb|ALO21902.1| (NdhH (plastid) [Cucurbita cordata]) HSP 1 Score: 299.3 bits (765), Expect = 5.5e-78 Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 1
BLAST of CmaCh12G007320 vs. NCBI nr
Match: gi|952954760|gb|ALO22118.1| (NdhH (plastid) [Cucurbita ficifolia]) HSP 1 Score: 299.3 bits (765), Expect = 5.5e-78 Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 1
BLAST of CmaCh12G007320 vs. NCBI nr
Match: gi|952954402|gb|ALO21766.1| (NdhH (plastid) [Cucurbita argyrosperma]) HSP 1 Score: 299.3 bits (765), Expect = 5.5e-78 Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 1
BLAST of CmaCh12G007320 vs. NCBI nr
Match: gi|545719483|ref|YP_008578144.1| (NADH dehydrogenase subunit 7 (chloroplast) [Allosyncarpia ternata]) HSP 1 Score: 297.4 bits (760), Expect = 2.1e-77 Identity = 143/147 (97.28%), Postives = 144/147 (97.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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