CmaCh12G006550 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G006550
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	WRKY transcription factor 114
Location	Cma_Chr12 : 3467830 .. 3468691 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAACTTTTTTTTTTTTTTTGTTAACTTTTGGCTTCTCACCTTCCAAATGTCGTACAATAGTAACCAGTACCCGGGGACATCCGAGAGCGATCTTGCCGAGCAGCCCGGGATCGAGTTTACGGACTCGATGTTTGATGGGTGGCTCGATGTAAACGCTTCGTCTCTGGTCGACACGGTGATGTATCCGGGTTATCAATGGGACGAGGTTGATGAGCTTACTCGGAACACCATCCACCAAGGAGAGCCTAGCAGTGGTAAGCGCATAAGTTTTGTTACATTTTAGCATTCGTAAGTTCTTCATGATTCCTCCTGATATATTGATGATCTTTCATAAGTTCGTGAAAGATTCGCATTCAAGACAAAATCAGAAGTTGAGATTTTGGATGATGGGTTCAAGTGGAGGAAGTATGGGAAGAAGATGGTGAAGAACAGCCCGAATCCGAGGTAAGGGAAGCTTGGATGATCTAGAACGCAATGAAAAAGAAACGTTTGTGTTCATCTAAATTGATATGACGATTTATGAAATGCAGGAACTACTACAAATGCTCGGTCGAAGGCTGCCCGGTGAAGAAGAGAGTCGAAAGAGATCGAGATGATCCAAAATACGTGATAACGACCTATGAGGGTGTCCATACCCATGAAAGTTCATAAGAAAATATTTAAATCTTTTTTTAGTATGAAAATAGTTGTTGGGTACGAGTTCTAGTTTTTTCTCGAATGCATAAATTGTTGTTCTAGCTTCAAATCCTTTCTCCTCTTTGTGCCATAAACTCGAAGAACACGGTACGGGTAGCGAACGCATATATTTACAGAGAAATGGCTCTGGATTCAGCGAATATATAACAAAGTAGCCTTATGAT

mRNA sequence

CACAACTTTTTTTTTTTTTTTGTTAACTTTTGGCTTCTCACCTTCCAAATGTCGTACAATAGTAACCAGTACCCGGGGACATCCGAGAGCGATCTTGCCGAGCAGCCCGGGATCGAGTTTACGGACTCGATGTTTGATGGGTGGCTCGATGTAAACGCTTCGTCTCTGGTCGACACGGTGATGTATCCGGGTTATCAATGGGACGAGGTTGATGAGCTTACTCGGAACACCATCCACCAAGGAGAGCCTAGCAGTGTTCGTGAAAGATTCGCATTCAAGACAAAATCAGAAGTTGAGATTTTGGATGATGGGTTCAAGTGGAGGAAGTATGGGAAGAAGATGGTGAAGAACAGCCCGAATCCGAGGAACTACTACAAATGCTCGGTCGAAGGCTGCCCGGTGAAGAAGAGAGTCGAAAGAGATCGAGATGATCCAAAATACGTGATAACGACCTATGAGGGTGTCCATACCCATGAAAGTTCATAAGAAAATATTTAAATCTTTTTTTAGTATGAAAATAGTTGTTGGGTACGAGTTCTAGTTTTTTCTCGAATGCATAAATTGTTGTTCTAGCTTCAAATCCTTTCTCCTCTTTGTGCCATAAACTCGAAGAACACGGTACGGGTAGCGAACGCATATATTTACAGAGAAATGGCTCTGGATTCAGCGAATATATAACAAAGTAGCCTTATGAT

Coding sequence (CDS)

ATGTCGTACAATAGTAACCAGTACCCGGGGACATCCGAGAGCGATCTTGCCGAGCAGCCCGGGATCGAGTTTACGGACTCGATGTTTGATGGGTGGCTCGATGTAAACGCTTCGTCTCTGGTCGACACGGTGATGTATCCGGGTTATCAATGGGACGAGGTTGATGAGCTTACTCGGAACACCATCCACCAAGGAGAGCCTAGCAGTGTTCGTGAAAGATTCGCATTCAAGACAAAATCAGAAGTTGAGATTTTGGATGATGGGTTCAAGTGGAGGAAGTATGGGAAGAAGATGGTGAAGAACAGCCCGAATCCGAGGAACTACTACAAATGCTCGGTCGAAGGCTGCCCGGTGAAGAAGAGAGTCGAAAGAGATCGAGATGATCCAAAATACGTGATAACGACCTATGAGGGTGTCCATACCCATGAAAGTTCATAA

Protein sequence

MSYNSNQYPGTSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELTRNTIHQGEPSSVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDRDDPKYVITTYEGVHTHESS

Homology

[Close]

BLAST of CmaCh12G006550 vs. Swiss-Prot
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.7e-33
Identity = 63/79 (79.75%), Postives = 70/79 (88.61%), Query Frame = 1


Query: 66  EPSSVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERD 125
           E   ++ R AFKT+SEVE+LDDGFKWRKYGKKMVKNSP+PRNYYKCSV+GCPVKKRVERD
Sbjct: 93  EKKKIKGRVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERD 152

Query: 126 RDDPKYVITTYEGVHTHES 145
           RDDP +VITTYEG H H S
Sbjct: 153 RDDPSFVITTYEGSHNHSS 171

[Close]

BLAST of CmaCh12G006550 vs. Swiss-Prot
Match: WRK51_ARATH (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana GN=WRKY51 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.9e-27
Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 1


Query: 55  DELTRNTIHQGEPSSVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVE 114
           +   R +    +      R AF+T+S+++++DDGFKWRKYGKK VKN+ N RNYYKCS E
Sbjct: 79  ESTNRGSKESDQTKETGHRVAFRTRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSE 138

Query: 115 GCPVKKRVERDRDDPKYVITTYEGVHTHES 145
           GC VKKRVERD DD  YVITTYEGVH HES
Sbjct: 139 GCSVKKRVERDGDDAAYVITTYEGVHNHES 168

[Close]

BLAST of CmaCh12G006550 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-23
Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 1


Query: 73  RFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDRDDPKYV 132
           RFAF TKS+++ LDDG++WRKYG+K VKNSP PR+YY+C+  GC VKKRVER  DDP  V
Sbjct: 208 RFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIV 267

Query: 133 ITTYEGVHTH 143
           +TTYEG HTH
Sbjct: 268 MTTYEGQHTH 277

[Close]

BLAST of CmaCh12G006550 vs. Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.8e-23
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 1


Query: 56  ELTRNTIHQGEPSSVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEG 115
           +LT+    +GE      R AF TKSE++ L+DG++WRKYG+K VKNSP PR+YY+C+ + 
Sbjct: 106 QLTKQGKKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQK 165

Query: 116 CPVKKRVERDRDDPKYVITTYEGVHTH 143
           C VKKRVER   DP  VITTYEG H H
Sbjct: 166 CNVKKRVERSFQDPSIVITTYEGKHNH 192

[Close]

BLAST of CmaCh12G006550 vs. Swiss-Prot
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.8e-23
Identity = 50/77 (64.94%), Postives = 63/77 (81.82%), Query Frame = 1


Query: 70  VRE-RFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDRDD 129
           VRE RF FKT SEV++LDDG++WRKYG+K+VKN+ +PR+YY+C+ + C VKKRVER  DD
Sbjct: 206 VREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKRVERLADD 265

Query: 130 PKYVITTYEGVHTHESS 146
           P+ VITTYEG H H  S
Sbjct: 266 PRMVITTYEGRHLHSPS 282

[Close]

BLAST of CmaCh12G006550 vs. TrEMBL
Match: A0A0A0KD40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363560 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 7.2e-65
Identity = 125/153 (81.70%), Postives = 132/153 (86.27%), Query Frame = 1


Query: 1   MSYNSNQYPGTSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELTRN 60
           MSYNSNQ+  TSESDL+EQPG EFTD MFDGWL+ N+SSL D+VMYP YQ  EVDE   N
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSSLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TIHQGEPSS--------VRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120
           TI QGEPSS        +RERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS
Sbjct: 61  TIQQGEPSSRDYGREREIRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120

Query: 121 VEGCPVKKRVERDRDDPKYVITTYEGVHTHESS 146
           VEGCPVKKRVERDR+DPKYVITTYEGVHTHESS
Sbjct: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of CmaCh12G006550 vs. TrEMBL
Match: A0A067GDY4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031482mg PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.1e-39
Identity = 94/156 (60.26%), Postives = 107/156 (68.59%), Query Frame = 1


Query: 4   NSNQYPGTS-ESDLAEQPGIEFTDSM-FDGWL-DVNASSLVDTVMYPGYQWDEVDELTRN 63
           N N  P  S ESD AE+   E ++ + FD W  D  AS L   V  P Y+ +EV E    
Sbjct: 3   NINLIPQDSPESDSAEKTNFELSEYLTFDEWFEDDQASKLFGYVQNPVYRANEVVEPGGT 62

Query: 64  TIHQGEPSS-----------VRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYY 123
           + H   PS+           V+ER AFKTKS+VEILDDGFKWRKYGKKMVKNSPNPRNYY
Sbjct: 63  STHFEGPSNSDNDSGREKKPVKERVAFKTKSDVEILDDGFKWRKYGKKMVKNSPNPRNYY 122

Query: 124 KCSVEGCPVKKRVERDRDDPKYVITTYEGVHTHESS 146
           KCSV+GCPVKKRVERDRDDP YVITTYEG HTH+S+
Sbjct: 123 KCSVDGCPVKKRVERDRDDPSYVITTYEGFHTHQSN 158

[Close]

BLAST of CmaCh12G006550 vs. TrEMBL
Match: V4UPS5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009761mg PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.1e-39
Identity = 94/156 (60.26%), Postives = 107/156 (68.59%), Query Frame = 1


Query: 4   NSNQYPGTS-ESDLAEQPGIEFTDSM-FDGWL-DVNASSLVDTVMYPGYQWDEVDELTRN 63
           N N  P  S ESD AE+   E ++ + FD W  D  AS L   V  P Y+ +EV E    
Sbjct: 3   NINLIPQDSPESDSAEKTNFELSEYLTFDEWFEDDQASKLFGYVQNPVYRANEVVEPGGT 62

Query: 64  TIHQGEPSS-----------VRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYY 123
           + H   PS+           V+ER AFKTKS+VEILDDGFKWRKYGKKMVKNSPNPRNYY
Sbjct: 63  STHFEGPSNSDNDSGREKKPVKERVAFKTKSDVEILDDGFKWRKYGKKMVKNSPNPRNYY 122

Query: 124 KCSVEGCPVKKRVERDRDDPKYVITTYEGVHTHESS 146
           KCSV+GCPVKKRVERDRDDP YVITTYEG HTH+S+
Sbjct: 123 KCSVDGCPVKKRVERDRDDPSYVITTYEGFHTHQSN 158

[Close]

BLAST of CmaCh12G006550 vs. TrEMBL
Match: F8WL84_CITUN (WRKY DNA-binding protein OS=Citrus unshiu GN=ORF17 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.0e-39
Identity = 90/146 (61.64%), Postives = 103/146 (70.55%), Query Frame = 1


Query: 13  ESDLAEQPGIEFTDSM-FDGWL-DVNASSLVDTVMYPGYQWDEVDELTRNTIHQGEPSS- 72
           ESD AE+   E ++ + FD W  D  AS L   V  P Y+ +EV E    + H   PS+ 
Sbjct: 44  ESDSAEKTNFELSEYLTFDEWFEDDQASKLFGYVQNPVYRANEVVEPGGTSTHFEGPSNS 103

Query: 73  ----------VRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVK 132
                     V+ER AFKTKS+VEILDDGFKWRKYGKKMVKNSPNPRNYYKCSV+GCPVK
Sbjct: 104 DNDSGREKKPVKERVAFKTKSDVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVDGCPVK 163

Query: 133 KRVERDRDDPKYVITTYEGVHTHESS 146
           KRVERDRDDP YVITTYEG HTH+S+
Sbjct: 164 KRVERDRDDPSYVITTYEGFHTHQSN 189

[Close]

BLAST of CmaCh12G006550 vs. TrEMBL
Match: A0A0A7E9Y5_GOSAI (WRKY38 OS=Gossypium aridum PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.2e-39
Identity = 87/155 (56.13%), Postives = 108/155 (69.68%), Query Frame = 1


Query: 1   MSYNSNQYPGTSESDLAEQPGIEFT-DSMFDGWL-DVNASSLVDTVMYPGYQWDEVDELT 60
           MS ++   P + ESD A+Q   EF  D  FDGWL D   + +   + +P  Q DEV+  +
Sbjct: 1   MSSSNFNPPDSPESDRADQSNFEFPEDWTFDGWLEDYPETIITGPIQFPFNQADEVNNDS 60

Query: 61  RNT-----IHQGEPS----SVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYY 120
             T     + + E +     VRERFAFKTKSEVEILDDG++WRKYGKK VKNSPNPRNYY
Sbjct: 61  ARTSSLLQVSENETARERRDVRERFAFKTKSEVEILDDGYRWRKYGKKWVKNSPNPRNYY 120

Query: 121 KCSVEGCPVKKRVERDRDDPKYVITTYEGVHTHES 145
           +CS++GCPVKKRVERD++DP YVITTYEG+H H S
Sbjct: 121 RCSIDGCPVKKRVERDKEDPSYVITTYEGIHNHRS 155

[Close]

BLAST of CmaCh12G006550 vs. TAIR10
Match: AT5G26170.1 (AT5G26170.1 WRKY DNA-binding protein 50)

HSP 1 Score: 142.1 bits (357), Expect = 2.6e-34
Identity = 63/79 (79.75%), Postives = 70/79 (88.61%), Query Frame = 1


Query: 66  EPSSVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERD 125
           E   ++ R AFKT+SEVE+LDDGFKWRKYGKKMVKNSP+PRNYYKCSV+GCPVKKRVERD
Sbjct: 93  EKKKIKGRVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERD 152

Query: 126 RDDPKYVITTYEGVHTHES 145
           RDDP +VITTYEG H H S
Sbjct: 153 RDDPSFVITTYEGSHNHSS 171

[Close]

BLAST of CmaCh12G006550 vs. TAIR10
Match: AT5G64810.1 (AT5G64810.1 WRKY DNA-binding protein 51)

HSP 1 Score: 122.5 bits (306), Expect = 2.2e-28
Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 1


Query: 55  DELTRNTIHQGEPSSVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVE 114
           +   R +    +      R AF+T+S+++++DDGFKWRKYGKK VKN+ N RNYYKCS E
Sbjct: 79  ESTNRGSKESDQTKETGHRVAFRTRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSE 138

Query: 115 GCPVKKRVERDRDDPKYVITTYEGVHTHES 145
           GC VKKRVERD DD  YVITTYEGVH HES
Sbjct: 139 GCSVKKRVERDGDDAAYVITTYEGVHNHES 168

[Close]

BLAST of CmaCh12G006550 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48)

HSP 1 Score: 110.9 bits (276), Expect = 6.5e-25
Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 1


Query: 73  RFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDRDDPKYV 132
           RFAF TKS+++ LDDG++WRKYG+K VKNSP PR+YY+C+  GC VKKRVER  DDP  V
Sbjct: 208 RFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIV 267

Query: 133 ITTYEGVHTH 143
           +TTYEG HTH
Sbjct: 268 MTTYEGQHTH 277

[Close]

BLAST of CmaCh12G006550 vs. TAIR10
Match: AT1G29860.1 (AT1G29860.1 WRKY DNA-binding protein 71)

HSP 1 Score: 107.8 bits (268), Expect = 5.5e-24
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 1


Query: 56  ELTRNTIHQGEPSSVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEG 115
           +LT+    +GE      R AF TKSE++ L+DG++WRKYG+K VKNSP PR+YY+C+ + 
Sbjct: 106 QLTKQGKKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQK 165

Query: 116 CPVKKRVERDRDDPKYVITTYEGVHTH 143
           C VKKRVER   DP  VITTYEG H H
Sbjct: 166 CNVKKRVERSFQDPSIVITTYEGKHNH 192

[Close]

BLAST of CmaCh12G006550 vs. TAIR10
Match: AT4G39410.1 (AT4G39410.1 WRKY DNA-binding protein 13)

HSP 1 Score: 107.8 bits (268), Expect = 5.5e-24
Identity = 50/77 (64.94%), Postives = 63/77 (81.82%), Query Frame = 1


Query: 70  VRE-RFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDRDD 129
           VRE RF FKT SEV++LDDG++WRKYG+K+VKN+ +PR+YY+C+ + C VKKRVER  DD
Sbjct: 206 VREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKRVERLADD 265

Query: 130 PKYVITTYEGVHTHESS 146
           P+ VITTYEG H H  S
Sbjct: 266 PRMVITTYEGRHLHSPS 282

[Close]

BLAST of CmaCh12G006550 vs. NCBI nr
Match: gi|449453049|ref|XP_004144271.1| (PREDICTED: probable WRKY transcription factor 50 isoform X1 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 1.0e-64
Identity = 125/153 (81.70%), Postives = 132/153 (86.27%), Query Frame = 1


Query: 1   MSYNSNQYPGTSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELTRN 60
           MSYNSNQ+  TSESDL+EQPG EFTD MFDGWL+ N+SSL D+VMYP YQ  EVDE   N
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSSLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TIHQGEPSS--------VRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120
           TI QGEPSS        +RERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS
Sbjct: 61  TIQQGEPSSRDYGREREIRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120

Query: 121 VEGCPVKKRVERDRDDPKYVITTYEGVHTHESS 146
           VEGCPVKKRVERDR+DPKYVITTYEGVHTHESS
Sbjct: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of CmaCh12G006550 vs. NCBI nr
Match: gi|659089459|ref|XP_008445519.1| (PREDICTED: probable WRKY transcription factor 50 [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 8.8e-64
Identity = 124/153 (81.05%), Postives = 131/153 (85.62%), Query Frame = 1


Query: 1   MSYNSNQYPGTSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELTRN 60
           MSYNSNQ+  TSESDL+EQPG EFTD MFDGWL+ N+S+L D+VMYP YQ  EVDE   N
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSTLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TIHQGEPSS--------VRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120
           TI Q EPSS        VRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS
Sbjct: 61  TIQQAEPSSRDHGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120

Query: 121 VEGCPVKKRVERDRDDPKYVITTYEGVHTHESS 146
           VEGCPVKKRVERDR+DPKYVITTYEGVHTHESS
Sbjct: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of CmaCh12G006550 vs. NCBI nr
Match: gi|778715287|ref|XP_011657375.1| (PREDICTED: probable WRKY transcription factor 50 isoform X2 [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52
Identity = 104/126 (82.54%), Postives = 109/126 (86.51%), Query Frame = 1


Query: 28  MFDGWLDVNASSLVDTVMYPGYQWDEVDELTRNTIHQGEPSS--------VRERFAFKTK 87
           MFDGWL+ N+SSL D+VMYP YQ  EVDE   NTI QGEPSS        +RERFAFKTK
Sbjct: 1   MFDGWLNENSSSLTDSVMYPVYQEGEVDEFVGNTIQQGEPSSRDYGREREIRERFAFKTK 60

Query: 88  SEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDRDDPKYVITTYEGV 146
           SEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDR+DPKYVITTYEGV
Sbjct: 61  SEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV 120

[Close]

BLAST of CmaCh12G006550 vs. NCBI nr
Match: gi|645227462|ref|XP_008220528.1| (PREDICTED: probable WRKY transcription factor 50 isoform X2 [Prunus mume])

HSP 1 Score: 176.0 bits (445), Expect = 4.7e-41
Identity = 93/159 (58.49%), Postives = 111/159 (69.81%), Query Frame = 1


Query: 4   NSNQYPG--TSESDLAEQPGIEFTDSMFDG-WLDVN--ASSLVDTVMYPGYQWDEVDELT 63
           NSN +    + E+D ++Q   EF++ +  G WLD +   S  ++TV   GYQ +EVDE  
Sbjct: 3   NSNNFRAQESPENDFSDQSNFEFSEYLMIGEWLDEDHRTSMALETVQNSGYQANEVDESR 62

Query: 64  RNTIHQG-------------EPSSVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNP 123
            ++   G             E   VRER AFKTKSEVEILDDGFKWRKYGKKMVKNSPNP
Sbjct: 63  GSSSQLGGSNSRENESGTVRERQEVRERVAFKTKSEVEILDDGFKWRKYGKKMVKNSPNP 122

Query: 124 RNYYKCSVEGCPVKKRVERDRDDPKYVITTYEGVHTHES 145
           RNYYKCSVEGCPVKKRVERDRDDP++VITTYEG+H H+S
Sbjct: 123 RNYYKCSVEGCPVKKRVERDRDDPRFVITTYEGIHNHQS 161

[Close]

BLAST of CmaCh12G006550 vs. NCBI nr
Match: gi|645227460|ref|XP_008220527.1| (PREDICTED: probable WRKY transcription factor 50 isoform X1 [Prunus mume])

HSP 1 Score: 175.6 bits (444), Expect = 6.1e-41
Identity = 93/160 (58.13%), Postives = 111/160 (69.38%), Query Frame = 1


Query: 4   NSNQYPG--TSESDLAEQPGIEFTDSMFDG-WLDVN--ASSLVDTVMYPGYQWDEVDELT 63
           NSN +    + E+D ++Q   EF++ +  G WLD +   S  ++TV   GYQ +EVDE  
Sbjct: 3   NSNNFRAQESPENDFSDQSNFEFSEYLMIGEWLDEDHRTSMALETVQNSGYQANEVDESR 62

Query: 64  RNTIHQG--------------EPSSVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPN 123
            ++   G              E   VRER AFKTKSEVEILDDGFKWRKYGKKMVKNSPN
Sbjct: 63  GSSSQLGGSNSTGENESGTVRERQEVRERVAFKTKSEVEILDDGFKWRKYGKKMVKNSPN 122

Query: 124 PRNYYKCSVEGCPVKKRVERDRDDPKYVITTYEGVHTHES 145
           PRNYYKCSVEGCPVKKRVERDRDDP++VITTYEG+H H+S
Sbjct: 123 PRNYYKCSVEGCPVKKRVERDRDDPRFVITTYEGIHNHQS 162

The following BLAST results are available for this feature:

BLAST of CmaCh12G006550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK50_ARATH	4.7e-33	79.75	Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=2 SV=...	[more]
WRK51_ARATH	3.9e-27	61.11	Probable WRKY transcription factor 51 OS=Arabidopsis thaliana GN=WRKY51 PE=1 SV=...	[more]
WRK48_ARATH	1.2e-23	68.57	Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=...	[more]
WRK71_ARATH	9.8e-23	56.32	Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=...	[more]
WRK13_ARATH	9.8e-23	64.94	Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=...	[more]

BLAST of CmaCh12G006550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD40_CUCSA	7.2e-65	81.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363560 PE=4 SV=1	[more]
A0A067GDY4_CITSI	3.1e-39	60.26	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031482mg PE=4 SV=1	[more]
V4UPS5_9ROSI	3.1e-39	60.26	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009761mg PE=4 SV=1	[more]
F8WL84_CITUN	4.0e-39	61.64	WRKY DNA-binding protein OS=Citrus unshiu GN=ORF17 PE=4 SV=1	[more]
A0A0A7E9Y5_GOSAI	5.2e-39	56.13	WRKY38 OS=Gossypium aridum PE=2 SV=1	[more]

BLAST of CmaCh12G006550 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G26170.1	2.6e-34	79.75	WRKY DNA-binding protein 50	[more]
AT5G64810.1	2.2e-28	61.11	WRKY DNA-binding protein 51	[more]
AT5G49520.1	6.5e-25	68.57	WRKY DNA-binding protein 48	[more]
AT1G29860.1	5.5e-24	56.32	WRKY DNA-binding protein 71	[more]
AT4G39410.1	5.5e-24	64.94	WRKY DNA-binding protein 13	[more]

BLAST of CmaCh12G006550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453049\|ref\|XP_004144271.1\|	1.0e-64	81.70	PREDICTED: probable WRKY transcription factor 50 isoform X1 [Cucumis sativus]	[more]
gi\|659089459\|ref\|XP_008445519.1\|	8.8e-64	81.05	PREDICTED: probable WRKY transcription factor 50 [Cucumis melo]	[more]
gi\|778715287\|ref\|XP_011657375.1\|	1.2e-52	82.54	PREDICTED: probable WRKY transcription factor 50 isoform X2 [Cucumis sativus]	[more]
gi\|645227462\|ref\|XP_008220528.1\|	4.7e-41	58.49	PREDICTED: probable WRKY transcription factor 50 isoform X2 [Prunus mume]	[more]
gi\|645227460\|ref\|XP_008220527.1\|	6.1e-41	58.13	PREDICTED: probable WRKY transcription factor 50 isoform X1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003657	WRKY_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G006550.1	CmaCh12G006550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	GENE3D	G3DSA:2.20.25.80		coord: 71..143 score: 4.8
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 86..143 score: 3.0
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 85..144 score: 3.1
IPR003657	WRKY domain	PROFILE	PS50811	WRKY	coord: 80..145 score: 30
IPR003657	WRKY domain	unknown	SSF118290	WRKY DNA-binding domain	coord: 78..143 score: 1.83
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 56..144 score: 2.5
None	No IPR available	PANTHER	PTHR31221:SF28	SUBFAMILY NOT NAMED	coord: 56..144 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh12G006550	Cucsa.056150	Cucumber (Gy14) v1	cgycmaB0073
CmaCh12G006550	Cla021984	Watermelon (97103) v1	cmawmB153
CmaCh12G006550	Csa6G363560	Cucumber (Chinese Long) v2	cmacuB195
CmaCh12G006550	ClCG08G009970	Watermelon (Charleston Gray)	cmawcgB175
CmaCh12G006550	CSPI06G19210	Wild cucumber (PI 183967)	cmacpiB198
CmaCh12G006550	CmoCh05G004350	Cucurbita moschata (Rifu)	cmacmoB203
CmaCh12G006550	CmoCh12G005940	Cucurbita moschata (Rifu)	cmacmoB176
CmaCh12G006550	Lsi08G008520	Bottle gourd (USVL1VR-Ls)	cmalsiB190
CmaCh12G006550	Cp4.1LG07g05980	Cucurbita pepo (Zucchini)	cmacpeB203
CmaCh12G006550	MELO3C030287.2	Melon (DHL92) v3.6.1	cmamedB179
CmaCh12G006550	CsaV3_6G032100	Cucumber (Chinese Long) v3	cmacucB0224
CmaCh12G006550	Cla97C08G152780	Watermelon (97103) v2	cmawmbB200
CmaCh12G006550	Bhi04G001171	Wax gourd	cmawgoB0204
CmaCh12G006550	CsGy6G018650	Cucumber (Gy14) v2	cgybcmaB718
CmaCh12G006550	Carg23944	Silver-seed gourd	carcmaB0975
CmaCh12G006550	Carg09303	Silver-seed gourd	carcmaB0184

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh12G006550	CmaCh05G004180	Cucurbita maxima (Rimu)	cmacmaB203

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh12G006550	Melon (DHL92) v3.5.1	cmameB164
CmaCh12G006550	Bottle gourd (USVL1VR-Ls)	cmalsiB174
CmaCh12G006550	Cucurbita maxima (Rimu)	cmacmaB033
CmaCh12G006550	Cucurbita moschata (Rifu)	cmacmoB164