ClCG08G009970 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG08G009970
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	WRKY DNA-binding protein
Location	CG_Chr08 : 22764972 .. 22765771 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGTTTTTGCTTCTCTGTTTCCAAATGTCTTACAATAGTAACCAGCAGCTCACTACGTCGGAGAGCGATCTCTCCGAGCAGCCGGGGTTGGAGTTTACGGACTGGATGTTTGATGGGTGGCTGAACGAAAACTCTTCATCTCTGGCCGACTCGGTGATGTACTCGGTTTATCAAGAGGGGGAGGTTGATGAATTTGTTGGGAACACCATTCAGCAAGGACAGCCTAGCAGCAGTAAGCACATAACTCTTATTGCATTTTAGCTTTTGTGTTCTGGGTTCATCGGTTAGGAGGAATCTCTTTTTCCTCTCGTCTTTTTTGCATTTCTCTATCCTACTTGTGGTCTCATGTATGATCTTGAATGGTGTTTGTAGGAGACAGTGGGAGAGAGAGAGAAGTTAGAGAAAGATTTGCATTCAAGACAAAATCAGAAATTGAGATTCTGGATGATGGTTTCAAGTGGAGGAAATATGGGAAGAAGATGGTGAAGAACAGCCCAAATCCAAGGTAAGAAAATAAAAAGACTAGTAAGGTTCCTAATTGAACATTGAATTCTATCCTAACATAACATGTTCCAATGCTAAAAACAATAAGCAAAGATAGTCTAGAAACCCAATGAAAACAAGTGGATTTGTGTGAGTTTTTGATCTGAACTGGCTCAACCATCTATGAAATACAGGAACTACTACAAATGCTCGGTCGAAGGCTGCCCGGTGAAGAAGAGAGTCGAAAGAGATCGAGAGGATCCGAAATACGTGATAACAACATACGAGGGTGTTCATACTCATGAAAGTTCTTGA

mRNA sequence

CTTTGTTTTTGCTTCTCTGTTTCCAAATGTCTTACAATAGTAACCAGCAGCTCACTACGTCGGAGAGCGATCTCTCCGAGCAGCCGGGGTTGGAGTTTACGGACTGGATGTTTGATGGGTGGCTGAACGAAAACTCTTCATCTCTGGCCGACTCGGTGATGTACTCGGTTTATCAAGAGGGGGAGGTTGATGAATTTGTTGGGAACACCATTCAGCAAGGACAGCCTAGCAGCAGAGACAGTGGGAGAGAGAGAGAAGTTAGAGAAAGATTTGCATTCAAGACAAAATCAGAAATTGAGATTCTGGATGATGGTTTCAAGTGGAGGAAATATGGGAAGAAGATGGTGAAGAACAGCCCAAATCCAAGGAACTACTACAAATGCTCGGTCGAAGGCTGCCCGGTGAAGAAGAGAGTCGAAAGAGATCGAGAGGATCCGAAATACGTGATAACAACATACGAGGGTGTTCATACTCATGAAAGTTCTTGA

Coding sequence (CDS)

ATGTCTTACAATAGTAACCAGCAGCTCACTACGTCGGAGAGCGATCTCTCCGAGCAGCCGGGGTTGGAGTTTACGGACTGGATGTTTGATGGGTGGCTGAACGAAAACTCTTCATCTCTGGCCGACTCGGTGATGTACTCGGTTTATCAAGAGGGGGAGGTTGATGAATTTGTTGGGAACACCATTCAGCAAGGACAGCCTAGCAGCAGAGACAGTGGGAGAGAGAGAGAAGTTAGAGAAAGATTTGCATTCAAGACAAAATCAGAAATTGAGATTCTGGATGATGGTTTCAAGTGGAGGAAATATGGGAAGAAGATGGTGAAGAACAGCCCAAATCCAAGGAACTACTACAAATGCTCGGTCGAAGGCTGCCCGGTGAAGAAGAGAGTCGAAAGAGATCGAGAGGATCCGAAATACGTGATAACAACATACGAGGGTGTTCATACTCATGAAAGTTCTTGA

Protein sequence

MSYNSNQQLTTSESDLSEQPGLEFTDWMFDGWLNENSSSLADSVMYSVYQEGEVDEFVGNTIQQGQPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGVHTHESS

Homology

[Close]

BLAST of ClCG08G009970 vs. Swiss-Prot
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.0e-33
Identity = 60/84 (71.43%), Postives = 73/84 (86.90%), Query Frame = 1


Query: 69  SRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKK 128
           +++   +++++ R AFKT+SE+E+LDDGFKWRKYGKKMVKNSP+PRNYYKCSV+GCPVKK
Sbjct: 88  NQNKKEKKKIKGRVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKK 147

Query: 129 RVERDREDPKYVITTYEGVHTHES 153
           RVERDR+DP +VITTYEG H H S
Sbjct: 148 RVERDRDDPSFVITTYEGSHNHSS 171

[Close]

BLAST of ClCG08G009970 vs. Swiss-Prot
Match: WRK51_ARATH (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana GN=WRKY51 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 9.7e-29
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 1


Query: 69  SRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKK 128
           S++S + +E   R AF+T+S+I+++DDGFKWRKYGKK VKN+ N RNYYKCS EGC VKK
Sbjct: 85  SKESDQTKETGHRVAFRTRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKK 144

Query: 129 RVERDREDPKYVITTYEGVHTHES 153
           RVERD +D  YVITTYEGVH HES
Sbjct: 145 RVERDGDDAAYVITTYEGVHNHES 168

[Close]

BLAST of ClCG08G009970 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.0e-25
Identity = 56/115 (48.70%), Postives = 73/115 (63.48%), Query Frame = 1


Query: 36  NSSSLADSVMYSVYQEGEVDEFVGNTIQQGQPSSRDSGREREVRERFAFKTKSEIEILDD 95
           N ++    V     +EG+  +    T  Q +   ++  + RE   RFAF TKS+I+ LDD
Sbjct: 165 NDNNSGKEVTVKDQEEGDQQQEQKGTKPQLKAKKKNQKKAREA--RFAFLTKSDIDNLDD 224

Query: 96  GFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGVHTH 151
           G++WRKYG+K VKNSP PR+YY+C+  GC VKKRVER  +DP  V+TTYEG HTH
Sbjct: 225 GYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTH 277

[Close]

BLAST of ClCG08G009970 vs. Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.5e-24
Identity = 57/121 (47.11%), Postives = 78/121 (64.46%), Query Frame = 1


Query: 30  DGWLNENSSSLADSVMYSVYQEGEVDEFVGNTIQQGQPSSRDSGREREVRERFAFKTKSE 89
           +G   EN++  +D +  +   EG++   VG + +Q     +  G ++E   R AF TKSE
Sbjct: 76  EGEPKENTNDKSDQMEDN---EGDLHG-VGESSKQLTKQGKKKGEKKEREVRVAFMTKSE 135

Query: 90  IEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGVHT 149
           I+ L+DG++WRKYG+K VKNSP PR+YY+C+ + C VKKRVER  +DP  VITTYEG H 
Sbjct: 136 IDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPSIVITTYEGKHN 192

Query: 150 H 151
           H
Sbjct: 196 H 192

[Close]

BLAST of ClCG08G009970 vs. Swiss-Prot
Match: WRK45_ARATH (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana GN=WRKY45 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.5e-24
Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 1


Query: 61  TIQQGQPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120
           T  + +P S+   +ERE R  +AF+T+S+++ILDDG++WRKYG+K VKN+P PR+YYKC+
Sbjct: 34  TSSEEKPRSKKKKKEREAR--YAFQTRSQVDILDDGYRWRKYGQKAVKNNPFPRSYYKCT 93

Query: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTH 151
            EGC VKK+V+R   D   V+TTY+GVHTH
Sbjct: 94  EEGCRVKKQVQRQWGDEGVVVTTYQGVHTH 121

[Close]

BLAST of ClCG08G009970 vs. TrEMBL
Match: A0A0A0KD40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363560 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 4.5e-81
Identity = 145/153 (94.77%), Postives = 148/153 (96.73%), Query Frame = 1


Query: 1   MSYNSNQQLTTSESDLSEQPGLEFTDWMFDGWLNENSSSLADSVMYSVYQEGEVDEFVGN 60
           MSYNSNQ LTTSESDLSEQPG EFTDWMFDGWLNENSSSL DSVMY VYQEGEVDEFVGN
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSSLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TIQQGQPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120
           TIQQG+PSSRD GRERE+RERFAFKTKSE+EILDDGFKWRKYGKKMVKNSPNPRNYYKCS
Sbjct: 61  TIQQGEPSSRDYGREREIRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120

Query: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154
           VEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of ClCG08G009970 vs. TrEMBL
Match: A0A067GDY4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031482mg PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.5e-41
Identity = 90/146 (61.64%), Postives = 111/146 (76.03%), Query Frame = 1


Query: 13  ESDLSEQPGLEFTDWM-FDGWLNENSSS-LADSVMYSVYQEGEVDEFVGNTIQQGQPSS- 72
           ESD +E+   E ++++ FD W  ++ +S L   V   VY+  EV E  G +     PS+ 
Sbjct: 13  ESDSAEKTNFELSEYLTFDEWFEDDQASKLFGYVQNPVYRANEVVEPGGTSTHFEGPSNS 72

Query: 73  -RDSGRERE-VRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVK 132
             DSGRE++ V+ER AFKTKS++EILDDGFKWRKYGKKMVKNSPNPRNYYKCSV+GCPVK
Sbjct: 73  DNDSGREKKPVKERVAFKTKSDVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVDGCPVK 132

Query: 133 KRVERDREDPKYVITTYEGVHTHESS 154
           KRVERDR+DP YVITTYEG HTH+S+
Sbjct: 133 KRVERDRDDPSYVITTYEGFHTHQSN 158

[Close]

BLAST of ClCG08G009970 vs. TrEMBL
Match: V4UPS5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009761mg PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.5e-41
Identity = 90/146 (61.64%), Postives = 111/146 (76.03%), Query Frame = 1


Query: 13  ESDLSEQPGLEFTDWM-FDGWLNENSSS-LADSVMYSVYQEGEVDEFVGNTIQQGQPSS- 72
           ESD +E+   E ++++ FD W  ++ +S L   V   VY+  EV E  G +     PS+ 
Sbjct: 13  ESDSAEKTNFELSEYLTFDEWFEDDQASKLFGYVQNPVYRANEVVEPGGTSTHFEGPSNS 72

Query: 73  -RDSGRERE-VRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVK 132
             DSGRE++ V+ER AFKTKS++EILDDGFKWRKYGKKMVKNSPNPRNYYKCSV+GCPVK
Sbjct: 73  DNDSGREKKPVKERVAFKTKSDVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVDGCPVK 132

Query: 133 KRVERDREDPKYVITTYEGVHTHESS 154
           KRVERDR+DP YVITTYEG HTH+S+
Sbjct: 133 KRVERDRDDPSYVITTYEGFHTHQSN 158

[Close]

BLAST of ClCG08G009970 vs. TrEMBL
Match: F8WL84_CITUN (WRKY DNA-binding protein OS=Citrus unshiu GN=ORF17 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.5e-41
Identity = 90/146 (61.64%), Postives = 111/146 (76.03%), Query Frame = 1


Query: 13  ESDLSEQPGLEFTDWM-FDGWLNENSSS-LADSVMYSVYQEGEVDEFVGNTIQQGQPSS- 72
           ESD +E+   E ++++ FD W  ++ +S L   V   VY+  EV E  G +     PS+ 
Sbjct: 44  ESDSAEKTNFELSEYLTFDEWFEDDQASKLFGYVQNPVYRANEVVEPGGTSTHFEGPSNS 103

Query: 73  -RDSGRERE-VRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVK 132
             DSGRE++ V+ER AFKTKS++EILDDGFKWRKYGKKMVKNSPNPRNYYKCSV+GCPVK
Sbjct: 104 DNDSGREKKPVKERVAFKTKSDVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVDGCPVK 163

Query: 133 KRVERDREDPKYVITTYEGVHTHESS 154
           KRVERDR+DP YVITTYEG HTH+S+
Sbjct: 164 KRVERDRDDPSYVITTYEGFHTHQSN 189

[Close]

BLAST of ClCG08G009970 vs. TrEMBL
Match: A0A059CLX9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00675 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.5e-41
Identity = 82/143 (57.34%), Postives = 107/143 (74.83%), Query Frame = 1


Query: 13  ESDLSEQPGLEFTDWM-FDGWLNENSSSLADSVMYSV-YQEGEVDEFVGNTIQQGQPSSR 72
           + D ++Q   E ++++  D WL ++ +S+      +  YQ  E D+ +G++     PS  
Sbjct: 14  DMDFNDQSDFELSEFLKIDEWLGDDPASMVHGAPANYFYQSNEADDSIGSSSNPEGPSRH 73

Query: 73  DSG--REREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKK 132
             G   ++EV+ERFAFKTKSE+EILDDGFKWRKYGKKMVKNSPNPRNYY+CSVEGCPVKK
Sbjct: 74  AEGGKEKKEVKERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYRCSVEGCPVKK 133

Query: 133 RVERDREDPKYVITTYEGVHTHE 152
           RVERDR+DP+YVITTYEG+H H+
Sbjct: 134 RVERDRDDPRYVITTYEGIHNHQ 156

[Close]

BLAST of ClCG08G009970 vs. TAIR10
Match: AT5G26170.1 (AT5G26170.1 WRKY DNA-binding protein 50)

HSP 1 Score: 142.1 bits (357), Expect = 2.8e-34
Identity = 60/84 (71.43%), Postives = 73/84 (86.90%), Query Frame = 1


Query: 69  SRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKK 128
           +++   +++++ R AFKT+SE+E+LDDGFKWRKYGKKMVKNSP+PRNYYKCSV+GCPVKK
Sbjct: 88  NQNKKEKKKIKGRVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKK 147

Query: 129 RVERDREDPKYVITTYEGVHTHES 153
           RVERDR+DP +VITTYEG H H S
Sbjct: 148 RVERDRDDPSFVITTYEGSHNHSS 171

[Close]

BLAST of ClCG08G009970 vs. TAIR10
Match: AT5G64810.1 (AT5G64810.1 WRKY DNA-binding protein 51)

HSP 1 Score: 127.9 bits (320), Expect = 5.5e-30
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 1


Query: 69  SRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKK 128
           S++S + +E   R AF+T+S+I+++DDGFKWRKYGKK VKN+ N RNYYKCS EGC VKK
Sbjct: 85  SKESDQTKETGHRVAFRTRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKK 144

Query: 129 RVERDREDPKYVITTYEGVHTHES 153
           RVERD +D  YVITTYEGVH HES
Sbjct: 145 RVERDGDDAAYVITTYEGVHNHES 168

[Close]

BLAST of ClCG08G009970 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48)

HSP 1 Score: 115.5 bits (288), Expect = 2.8e-26
Identity = 56/115 (48.70%), Postives = 73/115 (63.48%), Query Frame = 1


Query: 36  NSSSLADSVMYSVYQEGEVDEFVGNTIQQGQPSSRDSGREREVRERFAFKTKSEIEILDD 95
           N ++    V     +EG+  +    T  Q +   ++  + RE   RFAF TKS+I+ LDD
Sbjct: 165 NDNNSGKEVTVKDQEEGDQQQEQKGTKPQLKAKKKNQKKAREA--RFAFLTKSDIDNLDD 224

Query: 96  GFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGVHTH 151
           G++WRKYG+K VKNSP PR+YY+C+  GC VKKRVER  +DP  V+TTYEG HTH
Sbjct: 225 GYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTH 277

[Close]

BLAST of ClCG08G009970 vs. TAIR10
Match: AT1G29860.1 (AT1G29860.1 WRKY DNA-binding protein 71)

HSP 1 Score: 113.2 bits (282), Expect = 1.4e-25
Identity = 57/121 (47.11%), Postives = 78/121 (64.46%), Query Frame = 1


Query: 30  DGWLNENSSSLADSVMYSVYQEGEVDEFVGNTIQQGQPSSRDSGREREVRERFAFKTKSE 89
           +G   EN++  +D +  +   EG++   VG + +Q     +  G ++E   R AF TKSE
Sbjct: 76  EGEPKENTNDKSDQMEDN---EGDLHG-VGESSKQLTKQGKKKGEKKEREVRVAFMTKSE 135

Query: 90  IEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGVHT 149
           I+ L+DG++WRKYG+K VKNSP PR+YY+C+ + C VKKRVER  +DP  VITTYEG H 
Sbjct: 136 IDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPSIVITTYEGKHN 192

Query: 150 H 151
           H
Sbjct: 196 H 192

[Close]

BLAST of ClCG08G009970 vs. TAIR10
Match: AT3G01970.1 (AT3G01970.1 WRKY DNA-binding protein 45)

HSP 1 Score: 113.2 bits (282), Expect = 1.4e-25
Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 1


Query: 61  TIQQGQPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120
           T  + +P S+   +ERE R  +AF+T+S+++ILDDG++WRKYG+K VKN+P PR+YYKC+
Sbjct: 34  TSSEEKPRSKKKKKEREAR--YAFQTRSQVDILDDGYRWRKYGQKAVKNNPFPRSYYKCT 93

Query: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTH 151
            EGC VKK+V+R   D   V+TTY+GVHTH
Sbjct: 94  EEGCRVKKQVQRQWGDEGVVVTTYQGVHTH 121

[Close]

BLAST of ClCG08G009970 vs. NCBI nr
Match: gi|449453049|ref|XP_004144271.1| (PREDICTED: probable WRKY transcription factor 50 isoform X1 [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 6.4e-81
Identity = 145/153 (94.77%), Postives = 148/153 (96.73%), Query Frame = 1


Query: 1   MSYNSNQQLTTSESDLSEQPGLEFTDWMFDGWLNENSSSLADSVMYSVYQEGEVDEFVGN 60
           MSYNSNQ LTTSESDLSEQPG EFTDWMFDGWLNENSSSL DSVMY VYQEGEVDEFVGN
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSSLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TIQQGQPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120
           TIQQG+PSSRD GRERE+RERFAFKTKSE+EILDDGFKWRKYGKKMVKNSPNPRNYYKCS
Sbjct: 61  TIQQGEPSSRDYGREREIRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120

Query: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154
           VEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of ClCG08G009970 vs. NCBI nr
Match: gi|659089459|ref|XP_008445519.1| (PREDICTED: probable WRKY transcription factor 50 [Cucumis melo])

HSP 1 Score: 305.8 bits (782), Expect = 4.1e-80
Identity = 144/153 (94.12%), Postives = 147/153 (96.08%), Query Frame = 1


Query: 1   MSYNSNQQLTTSESDLSEQPGLEFTDWMFDGWLNENSSSLADSVMYSVYQEGEVDEFVGN 60
           MSYNSNQ LTTSESDLSEQPG EFTDWMFDGWLNENSS+L DSVMY VYQEGEVDEFVGN
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSTLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TIQQGQPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120
           TIQQ +PSSRD GREREVRERFAFKTKSE+EILDDGFKWRKYGKKMVKNSPNPRNYYKCS
Sbjct: 61  TIQQAEPSSRDHGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120

Query: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 154
           VEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of ClCG08G009970 vs. NCBI nr
Match: gi|778715287|ref|XP_011657375.1| (PREDICTED: probable WRKY transcription factor 50 isoform X2 [Cucumis sativus])

HSP 1 Score: 256.9 bits (655), Expect = 2.2e-65
Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 1


Query: 28  MFDGWLNENSSSLADSVMYSVYQEGEVDEFVGNTIQQGQPSSRDSGREREVRERFAFKTK 87
           MFDGWLNENSSSL DSVMY VYQEGEVDEFVGNTIQQG+PSSRD GRERE+RERFAFKTK
Sbjct: 1   MFDGWLNENSSSLTDSVMYPVYQEGEVDEFVGNTIQQGEPSSRDYGREREIRERFAFKTK 60

Query: 88  SEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV 147
           SE+EILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV
Sbjct: 61  SEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV 120

Query: 148 HTHESS 154
           HTHESS
Sbjct: 121 HTHESS 126

[Close]

BLAST of ClCG08G009970 vs. NCBI nr
Match: gi|645227462|ref|XP_008220528.1| (PREDICTED: probable WRKY transcription factor 50 isoform X2 [Prunus mume])

HSP 1 Score: 188.0 bits (476), Expect = 1.3e-44
Identity = 99/161 (61.49%), Postives = 124/161 (77.02%), Query Frame = 1


Query: 1   MSYNSNQQLTTS-ESDLSEQPGLEFTDWMFDG-WLNEN--SSSLADSVMYSVYQEGEVDE 60
           MS ++N +   S E+D S+Q   EF++++  G WL+E+  +S   ++V  S YQ  EVDE
Sbjct: 1   MSNSNNFRAQESPENDFSDQSNFEFSEYLMIGEWLDEDHRTSMALETVQNSGYQANEVDE 60

Query: 61  FVGNTIQQGQPSSRDSG----RER-EVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSP 120
             G++ Q G  +SR++     RER EVRER AFKTKSE+EILDDGFKWRKYGKKMVKNSP
Sbjct: 61  SRGSSSQLGGSNSRENESGTVRERQEVRERVAFKTKSEVEILDDGFKWRKYGKKMVKNSP 120

Query: 121 NPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGVHTHES 153
           NPRNYYKCSVEGCPVKKRVERDR+DP++VITTYEG+H H+S
Sbjct: 121 NPRNYYKCSVEGCPVKKRVERDRDDPRFVITTYEGIHNHQS 161

[Close]

BLAST of ClCG08G009970 vs. NCBI nr
Match: gi|645227460|ref|XP_008220527.1| (PREDICTED: probable WRKY transcription factor 50 isoform X1 [Prunus mume])

HSP 1 Score: 185.7 bits (470), Expect = 6.3e-44
Identity = 100/162 (61.73%), Postives = 124/162 (76.54%), Query Frame = 1


Query: 1   MSYNSNQQLTTS-ESDLSEQPGLEFTDWMFDG-WLNEN--SSSLADSVMYSVYQEGEVDE 60
           MS ++N +   S E+D S+Q   EF++++  G WL+E+  +S   ++V  S YQ  EVDE
Sbjct: 1   MSNSNNFRAQESPENDFSDQSNFEFSEYLMIGEWLDEDHRTSMALETVQNSGYQANEVDE 60

Query: 61  FVGNTIQQGQPSS---RDSG--RER-EVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNS 120
             G++ Q G  +S    +SG  RER EVRER AFKTKSE+EILDDGFKWRKYGKKMVKNS
Sbjct: 61  SRGSSSQLGGSNSTGENESGTVRERQEVRERVAFKTKSEVEILDDGFKWRKYGKKMVKNS 120

Query: 121 PNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGVHTHES 153
           PNPRNYYKCSVEGCPVKKRVERDR+DP++VITTYEG+H H+S
Sbjct: 121 PNPRNYYKCSVEGCPVKKRVERDRDDPRFVITTYEGIHNHQS 162

The following BLAST results are available for this feature:

BLAST of ClCG08G009970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK50_ARATH	5.0e-33	71.43	Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=2 SV=...	[more]
WRK51_ARATH	9.7e-29	67.86	Probable WRKY transcription factor 51 OS=Arabidopsis thaliana GN=WRKY51 PE=1 SV=...	[more]
WRK48_ARATH	5.0e-25	48.70	Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=...	[more]
WRK71_ARATH	2.5e-24	47.11	Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=...	[more]
WRK45_ARATH	2.5e-24	55.56	Probable WRKY transcription factor 45 OS=Arabidopsis thaliana GN=WRKY45 PE=2 SV=...	[more]

BLAST of ClCG08G009970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD40_CUCSA	4.5e-81	94.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363560 PE=4 SV=1	[more]
A0A067GDY4_CITSI	3.5e-41	61.64	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031482mg PE=4 SV=1	[more]
V4UPS5_9ROSI	3.5e-41	61.64	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009761mg PE=4 SV=1	[more]
F8WL84_CITUN	3.5e-41	61.64	WRKY DNA-binding protein OS=Citrus unshiu GN=ORF17 PE=4 SV=1	[more]
A0A059CLX9_EUCGR	4.5e-41	57.34	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00675 PE=4 SV=1	[more]

BLAST of ClCG08G009970 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G26170.1	2.8e-34	71.43	WRKY DNA-binding protein 50	[more]
AT5G64810.1	5.5e-30	67.86	WRKY DNA-binding protein 51	[more]
AT5G49520.1	2.8e-26	48.70	WRKY DNA-binding protein 48	[more]
AT1G29860.1	1.4e-25	47.11	WRKY DNA-binding protein 71	[more]
AT3G01970.1	1.4e-25	55.56	WRKY DNA-binding protein 45	[more]

BLAST of ClCG08G009970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453049\|ref\|XP_004144271.1\|	6.4e-81	94.77	PREDICTED: probable WRKY transcription factor 50 isoform X1 [Cucumis sativus]	[more]
gi\|659089459\|ref\|XP_008445519.1\|	4.1e-80	94.12	PREDICTED: probable WRKY transcription factor 50 [Cucumis melo]	[more]
gi\|778715287\|ref\|XP_011657375.1\|	2.2e-65	95.24	PREDICTED: probable WRKY transcription factor 50 isoform X2 [Cucumis sativus]	[more]
gi\|645227462\|ref\|XP_008220528.1\|	1.3e-44	61.49	PREDICTED: probable WRKY transcription factor 50 isoform X2 [Prunus mume]	[more]
gi\|645227460\|ref\|XP_008220527.1\|	6.3e-44	61.73	PREDICTED: probable WRKY transcription factor 50 isoform X1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003657	WRKY_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0050896	response to stimulus
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G009970.1	ClCG08G009970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	GENE3D	G3DSA:2.20.25.80		coord: 79..151 score: 6.7
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 94..151 score: 4.7
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 93..152 score: 4.3
IPR003657	WRKY domain	PROFILE	PS50811	WRKY	coord: 88..153 score: 30
IPR003657	WRKY domain	unknown	SSF118290	WRKY DNA-binding domain	coord: 86..151 score: 2.48
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 6..152 score: 1.9
None	No IPR available	PANTHER	PTHR31221:SF28	SUBFAMILY NOT NAMED	coord: 6..152 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG08G009970	Csa6G363560	Cucumber (Chinese Long) v2	cuwcgB496
ClCG08G009970	Cla021984	Watermelon (97103) v1	wcgwmB400
ClCG08G009970	Cla97C08G152780	Watermelon (97103) v2	wcgwmbB336
ClCG08G009970	Bhi04G001171	Wax gourd	wcgwgoB626
ClCG08G009970	CSPI06G19210	Wild cucumber (PI 183967)	cpiwcgB522
ClCG08G009970	CmaCh12G006550	Cucurbita maxima (Rimu)	cmawcgB175
ClCG08G009970	CmaCh05G004180	Cucurbita maxima (Rimu)	cmawcgB709
ClCG08G009970	CmoCh05G004350	Cucurbita moschata (Rifu)	cmowcgB713
ClCG08G009970	Lsi08G008520	Bottle gourd (USVL1VR-Ls)	lsiwcgB438
ClCG08G009970	Cp4.1LG11g03520	Cucurbita pepo (Zucchini)	cpewcgB122
ClCG08G009970	Cp4.1LG07g05980	Cucurbita pepo (Zucchini)	cpewcgB756
ClCG08G009970	CsGy6G018650	Cucumber (Gy14) v2	cgybwcgB454
ClCG08G009970	MELO3C030287.2	Melon (DHL92) v3.6.1	medwcgB289
ClCG08G009970	Carg09303	Silver-seed gourd	carwcgB0138
ClCG08G009970	Carg23944	Silver-seed gourd	carwcgB0673
ClCG08G009970	CsaV3_6G032100	Cucumber (Chinese Long) v3	cucwcgB514

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG08G009970	Cucumber (Gy14) v1	cgywcgB046
ClCG08G009970	Cucurbita moschata (Rifu)	cmowcgB166
ClCG08G009970	Melon (DHL92) v3.5.1	mewcgB296
ClCG08G009970	Cucumber (Chinese Long) v3	cucwcgB523