CmaCh12G006490 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G006490
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr12 : 3434494 .. 3435060 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACATTCCACTACGACCACCCTCTTCTTCATTCTTCTCATCTTCCACCTCGCCGGACCCGCCATGGCCTCCGACGACCACCGTCTCGTCGAGGTGGTGCCTCCAGTAAGCCTCCTCTGTATCAGCGAATGCTCAACTTGTCCTGTCATATGCGCACCCCCACCACCGCCCACGGTGACCCTCAAATCTCCTCCACCGGTGCCTCACTCCCCTCCGATGGCTTCCTTCCCACTCAACCCACCCCCATCCCCACCTCGACCGACCCCATCACCACCGCCGCCTCCAGTACCGCCGGTGGCTTCATCTCATTCCCCACCGCCTCCCGCTTTCAAATACTATTTCAGCTTGCCACCACCGCCTCCGGTGCTGATCCCGGAGCCTCTGCCGCCGACGACGGCGGCGCCTCATGGAAATACCAATGCTTATAATTACTACTTCTACGCTTCGAATTCATGTTCTCTGAATTCTCCGGCGTTTTTGTGGGCTCTGTTTCTCTTCCATTTGGTGTGTCTTGGTGGTGGTGAAGTGAAGCTTGATTTTCATGGTGTTTTGTATGGGAAGTAG

mRNA sequence

ATGGAACATTCCACTACGACCACCCTCTTCTTCATTCTTCTCATCTTCCACCTCGCCGGACCCGCCATGGCCTCCGACGACCACCGTCTCGTCGAGGTGGTGCCTCCAGTAAGCCTCCTCTGTATCAGCGAATGCTCAACTTGTCCTGTCATATGCGCACCCCCACCACCGCCCACGGTGACCCTCAAATCTCCTCCACCGGTGCCTCACTCCCCTCCGATGGCTTCCTTCCCACTCAACCCACCCCCATCCCCACCTCGACCGACCCCATCACCACCGCCGCCTCCAGTACCGCCGGTGGCTTCATCTCATTCCCCACCGCCTCCCGCTTTCAAATACTATTTCAGCTTGCCACCACCGCCTCCGGTGCTGATCCCGGAGCCTCTGCCGCCGACGACGGCGGCGCCTCATGGAAATACCAATGCTTATAATTACTACTTCTACGCTTCGAATTCATGTTCTCTGAATTCTCCGGCGTTTTTGTGGGCTCTGTTTCTCTTCCATTTGGTGTGTCTTGGTGGTGGTGAAGTGAAGCTTGATTTTCATGGTGTTTTGTATGGGAAGTAG

Coding sequence (CDS)

ATGGAACATTCCACTACGACCACCCTCTTCTTCATTCTTCTCATCTTCCACCTCGCCGGACCCGCCATGGCCTCCGACGACCACCGTCTCGTCGAGGTGGTGCCTCCAGTAAGCCTCCTCTGTATCAGCGAATGCTCAACTTGTCCTGTCATATGCGCACCCCCACCACCGCCCACGGTGACCCTCAAATCTCCTCCACCGGTGCCTCACTCCCCTCCGATGGCTTCCTTCCCACTCAACCCACCCCCATCCCCACCTCGACCGACCCCATCACCACCGCCGCCTCCAGTACCGCCGGTGGCTTCATCTCATTCCCCACCGCCTCCCGCTTTCAAATACTATTTCAGCTTGCCACCACCGCCTCCGGTGCTGATCCCGGAGCCTCTGCCGCCGACGACGGCGGCGCCTCATGGAAATACCAATGCTTATAATTACTACTTCTACGCTTCGAATTCATGTTCTCTGAATTCTCCGGCGTTTTTGTGGGCTCTGTTTCTCTTCCATTTGGTGTGTCTTGGTGGTGGTGAAGTGAAGCTTGATTTTCATGGTGTTTTGTATGGGAAGTAG

Protein sequence

MEHSTTTTLFFILLIFHLAGPAMASDDHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHSPPMASFPLNPPPSPPRPTPSPPPPPVPPVASSHSPPPPAFKYYFSLPPPPPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPAFLWALFLFHLVCLGGGEVKLDFHGVLYGK

Homology

[Close]

BLAST of CmaCh12G006490 vs. TrEMBL
Match: A0A0A0KD44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363610 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-42
Identity = 123/187 (65.78%), Postives = 135/187 (72.19%), Query Frame = 1


Query: 1   MEHSTTTTLF---FILLIFHLAGPAMASDDHRLVEVVPPVSLLCISECSTCPVICAPPPP 60
           MEH + T  F    ILLI  LA      +D R+VEVVPPVSLLCISECSTCP ICAPPPP
Sbjct: 1   MEHFSKTLHFSSILILLILRLA--RAVPEDGRVVEVVPPVSLLCISECSTCPTICAPPPP 60

Query: 61  PT--VTLKSPPPVPHSPPMASFPLNPPP-----SPPRPTPSPPPPPVPPVA-SSHSPPPP 120
           P   + LKSPPPVPH PP+A FPLN PP     SPP P PSPPPPP    A SSHSPPPP
Sbjct: 61  PPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPWPSPPPPPATATAVSSHSPPPP 120

Query: 121 AFKYYFSLPPPPPVLIPEPLPPT-TAAPHGNT--NAYNYYFY--ASNSCSLNSP-AFLWA 171
           AF+YYF+LPPPPPVLIP P+PP+ TA PHGNT  NAYNYYFY  AS+S   + P A  W 
Sbjct: 121 AFRYYFNLPPPPPVLIPVPVPPSATAGPHGNTNSNAYNYYFYAPASSSAPPSLPTALFWG 180

[Close]

BLAST of CmaCh12G006490 vs. TrEMBL
Match: A0A078DPE5_BRANA (BnaC02g04170D protein OS=Brassica napus GN=BnaC02g04170D PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.1e-12
Identity = 71/174 (40.80%), Postives = 94/174 (54.02%), Query Frame = 1


Query: 12  ILLIFHLAGPAMASDDHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHS 71
           ++++  + G  +AS      +V+ P   LCISECSTCP IC+PPP       SPPP P  
Sbjct: 727 LIIMVMVMGILVASSPSHQTDVLTP---LCISECSTCPTICSPPPSKPSPSTSPPPSPSL 786

Query: 72  PPMASFPLNPPPSPPRPTPSPPPPP---------VPPVASSHSPPPPAFKYYFSLPPPPP 131
           P  +  P  PPPSP  P+ SPPPPP          PP+ +   PPPP F Y+ S PPPPP
Sbjct: 787 PSSSPLP-QPPPSPSLPSSSPPPPPRKHSPPAVSPPPLITVIQPPPPRFDYFQSTPPPPP 846

Query: 132 VLIP-EPLPPTTAAPHG--------NTNAYNYYFYASNSCSLNSPAFLWALFLF 168
           +    +  PP+  +P G        N   Y Y++ ASN+ SL S +FL +LF F
Sbjct: 847 LASDVKGSPPSPPSPKGQPRGQQDPNPYPYFYFYTASNATSLFSSSFLTSLFYF 896

[Close]

BLAST of CmaCh12G006490 vs. TrEMBL
Match: A0A0D3AIP4_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.1e-12
Identity = 71/174 (40.80%), Postives = 94/174 (54.02%), Query Frame = 1


Query: 12  ILLIFHLAGPAMASDDHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHS 71
           ++++  + G  +AS      +V+ P   LCISECSTCP IC+PPP       SPPP P  
Sbjct: 727 LIIMVMVMGILVASSPSHQTDVLTP---LCISECSTCPTICSPPPSKPSPSTSPPPSPSL 786

Query: 72  PPMASFPLNPPPSPPRPTPSPPPPP---------VPPVASSHSPPPPAFKYYFSLPPPPP 131
           P  +  P  PPPSP  P+ SPPPPP          PP+ +   PPPP F Y+ S PPPPP
Sbjct: 787 PSSSPLP-QPPPSPSLPSSSPPPPPRKHSPPAVSPPPLITVIQPPPPRFDYFQSTPPPPP 846

Query: 132 VLIP-EPLPPTTAAPHG--------NTNAYNYYFYASNSCSLNSPAFLWALFLF 168
           +    +  PP+  +P G        N   Y Y++ ASN+ SL S +FL +LF F
Sbjct: 847 LASDVKGSPPSPPSPKGQPRGQQDPNPYPYFYFYTASNATSLFSSSFLTSLFYF 896

[Close]

BLAST of CmaCh12G006490 vs. TrEMBL
Match: A0A0D3B0Q7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-11
Identity = 81/184 (44.02%), Postives = 98/184 (53.26%), Query Frame = 1


Query: 9   LFFILLIFHLAGPAMASDDHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPV 68
           L  I L+  +   A  S D   ++++ P   LCISECSTCP IC+PPP       SPPP 
Sbjct: 3   LIIITLMVMIIQVASTSSDQ--IDILTP---LCISECSTCPTICSPPPSKPSPSTSPPPS 62

Query: 69  PHSPPMASFPLNPPPSP------PRPTPSPP-----PPPVPPVASSHSPPPPAFKYYFSL 128
           P S P +S PL PPPSP      P PTP PP     P P PP+ +   PPPP F Y+ S 
Sbjct: 63  P-SLPSSSPPLPPPPSPSLPLSSPPPTPPPPHKRSPPSPPPPLITVIQPPPPRFYYFEST 122

Query: 129 PPPPPVL-----IPEPLPPTTAAPHGNTNAYNY---YFY-ASNSCSLNSPAFLWALFLFH 173
           PPPPP+       P   P    +P G    Y Y   YFY ASN+ SL S +FL +LF+F 
Sbjct: 123 PPPPPLSSDGKGSPPSSPSPPPSPKGQQPPYPYPYFYFYTASNATSLLSSSFLISLFIFC 180

[Close]

BLAST of CmaCh12G006490 vs. TrEMBL
Match: A0A078JJY3_BRANA (BnaAnng25240D protein OS=Brassica napus GN=BnaAnng25240D PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.0e-11
Identity = 72/175 (41.14%), Postives = 96/175 (54.86%), Query Frame = 1


Query: 12  ILLIFHLAGPAMASDDHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHS 71
           ++++  + G  +AS      +V+ P   LCISECSTCP IC+PPP       SPPP P  
Sbjct: 3   LIIMVMVMGILVASSPSHQTDVLTP---LCISECSTCPTICSPPPSKPSPSTSPPPSPSL 62

Query: 72  PPMASFPLNPPPSPPRPTPSPPPP--------PVPPVASSHSPPPPAFKYYFSLPPPPPV 131
           P  +  P  PPPSP  P+ SPPPP          PP+ +   PPPP F Y+ S PPP P+
Sbjct: 63  PSSSPLP-PPPPSPSLPSSSPPPPRKHSPPAVSPPPLITVIQPPPPRFYYFQSTPPPSPL 122

Query: 132 LIP-EPLPPTTAAPHG----NTNAYNYYFYASNSCSLNSPAFLWALFLF-HLVCL 173
               +  PP+  +P G    N   Y Y++ ASN+ SL S +FL +LF F +L CL
Sbjct: 123 ASDVKGSPPSPPSPKGQQDPNPYPYFYFYTASNATSLFSSSFLTSLFYFLYLFCL 173

[Close]

BLAST of CmaCh12G006490 vs. TAIR10
Match: AT5G11990.1 (AT5G11990.1 proline-rich family protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08
Identity = 64/172 (37.21%), Postives = 86/172 (50.00%), Query Frame = 1


Query: 12  ILLIFHLAGPAMASDDHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHS 71
           +++I  +    +AS       V+ P   LCISECSTCP IC+PPP       SPPP P S
Sbjct: 5   VIIIALVMVMVVASSPSDQTNVLTP---LCISECSTCPTICSPPPSKPSPSMSPPPSP-S 64

Query: 72  PPMASFPLNPPPSPPRPTPSPPPPPVPPVASSHSPPPPAFKYYFSLPPPPPVL-----IP 131
            P++S P  PPP    P P       PP+ +   PPPP F Y+ S PPPPP+       P
Sbjct: 65  LPLSSSPPPPPPHKHSPPPLSQSLSPPPLITVIHPPPPRFYYFESTPPPPPLSPDGKGSP 124

Query: 132 EPLPPTTAAPHGNTNA---------YNYYFYASNSCSLNSPAFLWALFLFHL 170
             +P +  +P G +           Y Y++ ASN+  L S +FL AL +  L
Sbjct: 125 PSVPSSPPSPKGQSQGQQQPPYPFPYFYFYTASNATLLFSSSFLIALVVSSL 172

[Close]

BLAST of CmaCh12G006490 vs. NCBI nr
Match: gi|778715318|ref|XP_011657382.1| (PREDICTED: extensin-like [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 1.4e-42
Identity = 123/187 (65.78%), Postives = 135/187 (72.19%), Query Frame = 1


Query: 1   MEHSTTTTLF---FILLIFHLAGPAMASDDHRLVEVVPPVSLLCISECSTCPVICAPPPP 60
           MEH + T  F    ILLI  LA      +D R+VEVVPPVSLLCISECSTCP ICAPPPP
Sbjct: 1   MEHFSKTLHFSSILILLILRLA--RAVPEDGRVVEVVPPVSLLCISECSTCPTICAPPPP 60

Query: 61  PT--VTLKSPPPVPHSPPMASFPLNPPP-----SPPRPTPSPPPPPVPPVA-SSHSPPPP 120
           P   + LKSPPPVPH PP+A FPLN PP     SPP P PSPPPPP    A SSHSPPPP
Sbjct: 61  PPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPWPSPPPPPATATAVSSHSPPPP 120

Query: 121 AFKYYFSLPPPPPVLIPEPLPPT-TAAPHGNT--NAYNYYFY--ASNSCSLNSP-AFLWA 171
           AF+YYF+LPPPPPVLIP P+PP+ TA PHGNT  NAYNYYFY  AS+S   + P A  W 
Sbjct: 121 AFRYYFNLPPPPPVLIPVPVPPSATAGPHGNTNSNAYNYYFYAPASSSAPPSLPTALFWG 180

[Close]

BLAST of CmaCh12G006490 vs. NCBI nr
Match: gi|659089438|ref|XP_008445508.1| (PREDICTED: classical arabinogalactan protein 9-like [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 2.7e-41
Identity = 115/166 (69.28%), Postives = 125/166 (75.30%), Query Frame = 1


Query: 1   MEHSTTTTLF---FILLIFHLAGPAMASDDHRLVEVVPPVSLLCISECSTCPVICAPPPP 60
           MEH + T  F    ILLI  LAG A   +D R+V+VVPPVSLLCISECSTCP ICAPPPP
Sbjct: 1   MEHFSKTLHFSSILILLILPLAGAA--PEDGRVVQVVPPVSLLCISECSTCPTICAPPPP 60

Query: 61  PTVTLKSPPPVPHSPPMASFPLNPPP-----SPPRPTPSPPPPPVPPVA-SSHSPPPPAF 120
           P   LKSPPPVPH PP+A FPLN PP     SPP P+PSPPPPP    A SSHSPPPPAF
Sbjct: 61  PPTVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAF 120

Query: 121 KYYFSLPPPPPVLIPEPLPPT-TAAPHGNT--NAYNYYFYASNSCS 155
           +YYF+LPPPPPVLIP P+PP+ TAAP GNT  NAYNYYFYA  S S
Sbjct: 121 RYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSS 164

[Close]

BLAST of CmaCh12G006490 vs. NCBI nr
Match: gi|645227496|ref|XP_008220545.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Prunus mume])

HSP 1 Score: 84.0 bits (206), Expect = 3.1e-13
Identity = 72/149 (48.32%), Postives = 88/149 (59.06%), Query Frame = 1


Query: 39  LLCISECSTCPVICA-PPPPPTVTLKSPPPVP---HSPPMASFPLNPPPSPPR-----PT 98
           LLCISEC+TCPVIC+ PPPPP +   SPPP P   H  P  ++  +PPPSPP+     P 
Sbjct: 45  LLCISECTTCPVICSPPPPPPQLESSSPPPSPPPVHRSPSQTYYSSPPPSPPQFDYSSPP 104

Query: 99  PSPPPPPVPPVASSHS--------PPPPAFKYYFSLPPPPPVLIPEPLPPTTAAPHGNTN 158
           PSPPPPP  P   S S        PPPP+F Y+F++PP  PV        TT   H N+ 
Sbjct: 105 PSPPPPPPSPPKQSPSPSSYSKGAPPPPSFVYFFNMPPSGPV---PTTTTTTGVLHNNSY 164

Query: 159 AYNYYFYASNSCSLNSPAFLWALFLFHLV 171
            Y YYFYAS + SL++ AF   +FL  LV
Sbjct: 165 PY-YYFYASEASSLSAHAFFLFVFLVQLV 189

[Close]

BLAST of CmaCh12G006490 vs. NCBI nr
Match: gi|674942430|emb|CDX91180.1| (BnaC02g04170D [Brassica napus])

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-11
Identity = 71/174 (40.80%), Postives = 94/174 (54.02%), Query Frame = 1


Query: 12  ILLIFHLAGPAMASDDHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHS 71
           ++++  + G  +AS      +V+ P   LCISECSTCP IC+PPP       SPPP P  
Sbjct: 727 LIIMVMVMGILVASSPSHQTDVLTP---LCISECSTCPTICSPPPSKPSPSTSPPPSPSL 786

Query: 72  PPMASFPLNPPPSPPRPTPSPPPPP---------VPPVASSHSPPPPAFKYYFSLPPPPP 131
           P  +  P  PPPSP  P+ SPPPPP          PP+ +   PPPP F Y+ S PPPPP
Sbjct: 787 PSSSPLP-QPPPSPSLPSSSPPPPPRKHSPPAVSPPPLITVIQPPPPRFDYFQSTPPPPP 846

Query: 132 VLIP-EPLPPTTAAPHG--------NTNAYNYYFYASNSCSLNSPAFLWALFLF 168
           +    +  PP+  +P G        N   Y Y++ ASN+ SL S +FL +LF F
Sbjct: 847 LASDVKGSPPSPPSPKGQPRGQQDPNPYPYFYFYTASNATSLFSSSFLTSLFYF 896

[Close]

BLAST of CmaCh12G006490 vs. NCBI nr
Match: gi|922426245|ref|XP_013619193.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Brassica oleracea var. oleracea])

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-11
Identity = 71/174 (40.80%), Postives = 94/174 (54.02%), Query Frame = 1


Query: 12  ILLIFHLAGPAMASDDHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHS 71
           ++++  + G  +AS      +V+ P   LCISECSTCP IC+PPP       SPPP P  
Sbjct: 3   LIIMVMVMGILVASSPSHQTDVLTP---LCISECSTCPTICSPPPSKPSPSTSPPPSPSL 62

Query: 72  PPMASFPLNPPPSPPRPTPSPPPPP---------VPPVASSHSPPPPAFKYYFSLPPPPP 131
           P  +  P  PPPSP  P+ SPPPPP          PP+ +   PPPP F Y+ S PPPPP
Sbjct: 63  PSSSPLP-QPPPSPSLPSSSPPPPPRKHSPPAVSPPPLITVIQPPPPRFDYFQSTPPPPP 122

Query: 132 VLIP-EPLPPTTAAPHG--------NTNAYNYYFYASNSCSLNSPAFLWALFLF 168
           +    +  PP+  +P G        N   Y Y++ ASN+ SL S +FL +LF F
Sbjct: 123 LASDVKGSPPSPPSPKGQPRGQQDPNPYPYFYFYTASNATSLFSSSFLTSLFYF 172

The following BLAST results are available for this feature:

BLAST of CmaCh12G006490 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh12G006490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD44_CUCSA	1.0e-42	65.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363610 PE=4 SV=1	[more]
A0A078DPE5_BRANA	7.1e-12	40.80	BnaC02g04170D protein OS=Brassica napus GN=BnaC02g04170D PE=4 SV=1	[more]
A0A0D3AIP4_BRAOL	7.1e-12	40.80	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
A0A0D3B0Q7_BRAOL	2.1e-11	44.02	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
A0A078JJY3_BRANA	6.0e-11	41.14	BnaAnng25240D protein OS=Brassica napus GN=BnaAnng25240D PE=4 SV=1	[more]

BLAST of CmaCh12G006490 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11990.1	2.5e-08	37.21	proline-rich family protein	[more]

BLAST of CmaCh12G006490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778715318\|ref\|XP_011657382.1\|	1.4e-42	65.78	PREDICTED: extensin-like [Cucumis sativus]	[more]
gi\|659089438\|ref\|XP_008445508.1\|	2.7e-41	69.28	PREDICTED: classical arabinogalactan protein 9-like [Cucumis melo]	[more]
gi\|645227496\|ref\|XP_008220545.1\|	3.1e-13	48.32	PREDICTED: leucine-rich repeat extensin-like protein 3 [Prunus mume]	[more]
gi\|674942430\|emb\|CDX91180.1\|	1.0e-11	40.80	BnaC02g04170D [Brassica napus]	[more]
gi\|922426245\|ref\|XP_013619193.1\|	1.0e-11	40.80	PREDICTED: leucine-rich repeat extensin-like protein 3 [Brassica oleracea var. o...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G006490.1	CmaCh12G006490.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh12G006490	CmoCh12G005880	Cucurbita moschata (Rifu)	cmacmoB176
CmaCh12G006490	Cp4.1LG07g05990	Cucurbita pepo (Zucchini)	cmacpeB203
CmaCh12G006490	CsaV3_6G032150	Cucumber (Chinese Long) v3	cmacucB0224
CmaCh12G006490	Carg23949	Silver-seed gourd	carcmaB0975

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh12G006490	Silver-seed gourd	carcmaB0184
CmaCh12G006490	Watermelon (97103) v2	cmawmbB200
CmaCh12G006490	Wax gourd	cmawgoB0204
CmaCh12G006490	Cucurbita maxima (Rimu)	cmacmaB033
CmaCh12G006490	Cucurbita maxima (Rimu)	cmacmaB087
CmaCh12G006490	Cucurbita maxima (Rimu)	cmacmaB203
CmaCh12G006490	Cucurbita moschata (Rifu)	cmacmoB164
CmaCh12G006490	Cucurbita moschata (Rifu)	cmacmoB203
CmaCh12G006490	Wild cucumber (PI 183967)	cmacpiB198
CmaCh12G006490	Cucumber (Chinese Long) v2	cmacuB195
CmaCh12G006490	Melon (DHL92) v3.5.1	cmameB164
CmaCh12G006490	Watermelon (Charleston Gray)	cmawcgB175
CmaCh12G006490	Watermelon (97103) v1	cmawmB153
CmaCh12G006490	Cucurbita pepo (Zucchini)	cmacpeB185
CmaCh12G006490	Bottle gourd (USVL1VR-Ls)	cmalsiB174
CmaCh12G006490	Bottle gourd (USVL1VR-Ls)	cmalsiB190
CmaCh12G006490	Cucumber (Gy14) v2	cgybcmaB718
CmaCh12G006490	Melon (DHL92) v3.6.1	cmamedB179