CmaCh12G003980 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G003980
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Stress inducible protein coi6.1
Location	Cma_Chr12 : 2053596 .. 2055735 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTTCGGCATTTTAGGGTTTCCAATTTGCCGCTCATCGAAAGAAGTCTTCTTCGATCTCCGCTAGGGTTTTCCATCGTAATCGTTTCTTCCTTGTGTTTTCTCAAATCCCAACTGCTTCTCTCTTCTACTTTCAAGTTTTCGCCGAATCCTTCCCATAATAGACCCAGATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGCGAGGAAGGTGGCTAGGACCGAGGCGGCCTTGATCGAATCGATTAAGGTTTGTTTGAGCTATTTGGTTGGCTTTCAATAATGTGTGCTGGATTCAATTGTGTTCTGGTTCCAATTGATTGCGAGATCTACTTGGAATTGTAACTTTTTGGATGGGGGTAATTTGTAATCAGTAACGACTTTTTTTTCTCTAGTTTTTACGGCGATGGGGAGGAATCGATATGGGTTTTCTTGTTTCGTGTGAAGAGAGTTACAAGTTTTGTACAGGTGTAGATTGTAGTTTCAGTTTTGTTCGTCTGTGTTTTTCAAGTAATTGACGAGTGATAACTCTTCAAGGAACAAGAGATCTTTGAGAGTTTAAGTGAATGGATAGTGAGTTGGGAGTTTGTAAGTTGCATGTCTTGCAAAGCGTTCTTGGATCTTGTATGTATGGTTCCGTTTTCACTATCAGAACACCAAGTGTACATTTGTAGCAAATGAATTTTTAATAGAAAATTTATTATTCATGGGAACGTCATGATTTTTTATATCTTTTTTCAAATCATTATCTGGTTTTTGAAGTTGATGATTTCAACCAATTTTTAGTGAGAGAGAGTTTCTTCCTGTAGTTTGATTAATTTGAACGCCTTTGTATGAACTTTACTCGGGACTTGTTTTCCTCATAAACTTAGGCGTATGGTTACATGATGTGAATATTCGAGTTTACTAGGTAGAATGTATGATTATCCGAGTCCAAATGAACATGCTTCTTTACAATGGGAATGGCTACCATTTTGAAGGGTTGCCATTCGTTACTTAGTTAAGACATGGTTGATTTGTTTGGTGCTTGCGTGGTCTGCATTGTTTAAAATGGTTATTCTGGTGCGTTATAGCTCCTATCTGAAAGACGAGAAAAAGGGACTGAAAGAAAGAAAGAGAAAAGTAAGCACAAGAAAGAGAAGAGTAAGGACAAGAAACACAAAAGCAAAGAGCATAGAGATAAATCTTCTCGCAGCCGCCGCGACTCGACTGATCAGAAACAGAAGGAAGTCAAGGACCTTCTGCAGGGAACAAAAGTTGAAGCAGAACAATTGGAAAAGAGTGGTCTCACTGAAGAGCATGGGCAACCAGTATGGCCTCAAAGTCCTGGCTACTTGTCTGATGGAACTCAGTCCAATCACAAAAGAAAAAGGGGTGCATCGTTACAGCCTAATGAAGACTGTAAGCCTGGTGGGTTCTCTTTATTGGCTCTTTTGTGAAATTTGTTCACTTGGCCATTTGAGTGATCGCTAATATGTAAATAATTGATCACAAACAGGAAAAGTCATCCGAATCAAACTGGCTTCTTCACTTAGCCAACAAGAGGATTCATCAGCTGGCAGTGAACAGACGTGTTCTACAACTGGTCGTCGTAATTCTCTTCATCAAACGAGAGATGAGAACAGCAGCCGTGTGCCCATTGTGCAAAAAACTTCCTTCACTTCTCTTGATCAAAAGAGGGTTGAGAACAGCAGCCGTGTGCCCATTGTGCAAAAAACTTCCCTCACTTCTCTTGATCAAAAGAGAGATGAGAACAGCCGCAGTAGGCCCATTGTGCAAAAAACTTCCCTCACAATCGCCGACACAGCAGTCGCTGTCCAGGATCCAATTTCGGAACCTAATATCAAAGACCTTCCTTTGCATGCTGTTGACATTGGTAGTACTCATCGCAAGAGAAAGCCTTCTGAATCTGCTTATGAGGACTTGTTTGACAAATGGGTACCGCCAACGCTTCAGTTGGGGCAGCAAACGGTCGATGAAGAATGGCTCTTCGGAACCAAAAAGCAGGATGAAAGAACAAAGACCAACCAAGCTTTCAGTCATGCTCCCATCTGTAGAAGGTCCAGTCTGTGGCCGAGAGGACAGTTTGTACCTGAAGCTGACGTTTATCTGTTGCCTTATACGATTCCATTTTGA

mRNA sequence

TTGTTTCGGCATTTTAGGGTTTCCAATTTGCCGCTCATCGAAAGAAGTCTTCTTCGATCTCCGCTAGGGTTTTCCATCGTAATCGTTTCTTCCTTGTGTTTTCTCAAATCCCAACTGCTTCTCTCTTCTACTTTCAAGTTTTCGCCGAATCCTTCCCATAATAGACCCAGATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGCGAGGAAGGTGGCTAGGACCGAGGCGGCCTTGATCGAATCGATTAAGCTCCTATCTGAAAGACGAGAAAAAGGGACTGAAAGAAAGAAAGAGAAAAGTAAGCACAAGAAAGAGAAGAGTAAGGACAAGAAACACAAAAGCAAAGAGCATAGAGATAAATCTTCTCGCAGCCGCCGCGACTCGACTGATCAGAAACAGAAGGAAGTCAAGGACCTTCTGCAGGGAACAAAAGTTGAAGCAGAACAATTGGAAAAGAGTGGTCTCACTGAAGAGCATGGGCAACCAGTATGGCCTCAAAGTCCTGGCTACTTGTCTGATGGAACTCAGTCCAATCACAAAAGAAAAAGGGGTGCATCGTTACAGCCTAATGAAGACTGTAAGCCTGGAAAAGTCATCCGAATCAAACTGGCTTCTTCACTTAGCCAACAAGAGGATTCATCAGCTGGCAGTGAACAGACGTGTTCTACAACTGGTCGTCGTAATTCTCTTCATCAAACGAGAGATGAGAACAGCAGCCGTGTGCCCATTGTGCAAAAAACTTCCTTCACTTCTCTTGATCAAAAGAGGGTTGAGAACAGCAGCCGTGTGCCCATTGTGCAAAAAACTTCCCTCACTTCTCTTGATCAAAAGAGAGATGAGAACAGCCGCAGTAGGCCCATTGTGCAAAAAACTTCCCTCACAATCGCCGACACAGCAGTCGCTGTCCAGGATCCAATTTCGGAACCTAATATCAAAGACCTTCCTTTGCATGCTGTTGACATTGGTAGTACTCATCGCAAGAGAAAGCCTTCTGAATCTGCTTATGAGGACTTGTTTGACAAATGGGTACCGCCAACGCTTCAGTTGGGGCAGCAAACGGTCGATGAAGAATGGCTCTTCGGAACCAAAAAGCAGGATGAAAGAACAAAGACCAACCAAGCTTTCAGTCATGCTCCCATCTGTAGAAGGTCCAGTCTGTGGCCGAGAGGACAGTTTGTACCTGAAGCTGACGTTTATCTGTTGCCTTATACGATTCCATTTTGA

Coding sequence (CDS)

ATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGCGAGGAAGGTGGCTAGGACCGAGGCGGCCTTGATCGAATCGATTAAGCTCCTATCTGAAAGACGAGAAAAAGGGACTGAAAGAAAGAAAGAGAAAAGTAAGCACAAGAAAGAGAAGAGTAAGGACAAGAAACACAAAAGCAAAGAGCATAGAGATAAATCTTCTCGCAGCCGCCGCGACTCGACTGATCAGAAACAGAAGGAAGTCAAGGACCTTCTGCAGGGAACAAAAGTTGAAGCAGAACAATTGGAAAAGAGTGGTCTCACTGAAGAGCATGGGCAACCAGTATGGCCTCAAAGTCCTGGCTACTTGTCTGATGGAACTCAGTCCAATCACAAAAGAAAAAGGGGTGCATCGTTACAGCCTAATGAAGACTGTAAGCCTGGAAAAGTCATCCGAATCAAACTGGCTTCTTCACTTAGCCAACAAGAGGATTCATCAGCTGGCAGTGAACAGACGTGTTCTACAACTGGTCGTCGTAATTCTCTTCATCAAACGAGAGATGAGAACAGCAGCCGTGTGCCCATTGTGCAAAAAACTTCCTTCACTTCTCTTGATCAAAAGAGGGTTGAGAACAGCAGCCGTGTGCCCATTGTGCAAAAAACTTCCCTCACTTCTCTTGATCAAAAGAGAGATGAGAACAGCCGCAGTAGGCCCATTGTGCAAAAAACTTCCCTCACAATCGCCGACACAGCAGTCGCTGTCCAGGATCCAATTTCGGAACCTAATATCAAAGACCTTCCTTTGCATGCTGTTGACATTGGTAGTACTCATCGCAAGAGAAAGCCTTCTGAATCTGCTTATGAGGACTTGTTTGACAAATGGGTACCGCCAACGCTTCAGTTGGGGCAGCAAACGGTCGATGAAGAATGGCTCTTCGGAACCAAAAAGCAGGATGAAAGAACAAAGACCAACCAAGCTTTCAGTCATGCTCCCATCTGTAGAAGGTCCAGTCTGTGGCCGAGAGGACAGTTTGTACCTGAAGCTGACGTTTATCTGTTGCCTTATACGATTCCATTTTGA

Protein sequence

MSRCFPYPPPGYARKVARTEAALIESIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSKEHRDKSSRSRRDSTDQKQKEVKDLLQGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGTQSNHKRKRGASLQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRDENSSRVPIVQKTSFTSLDQKRVENSSRVPIVQKTSLTSLDQKRDENSRSRPIVQKTSLTIADTAVAVQDPISEPNIKDLPLHAVDIGSTHRKRKPSESAYEDLFDKWVPPTLQLGQQTVDEEWLFGTKKQDERTKTNQAFSHAPICRRSSLWPRGQFVPEADVYLLPYTIPF

Homology

[Close]

BLAST of CmaCh12G003980 vs. TrEMBL
Match: A0A0A0LK14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345960 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.2e-54
Identity = 142/201 (70.65%), Postives = 157/201 (78.11%), Query Frame = 1


Query: 1   MSRCFPYPPPGYARKVARTEAALIESIKLLSERREKGTER---------KKEKSKHKKEK 60
           MSRCFPYPPPGY RKVA TEAALIESIKL SER+ K   +         KKEKSK+KKE+
Sbjct: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERQSKNDRKNEKRRHKKEKKEKSKNKKER 60

Query: 61  SKDKKHKSKE---HRDKSSRSRRDSTDQKQ----KEVKDLLQGTKVEAEQLEKSGLTEEH 120
           SKDKKHKSKE   H+ KSSRS+    DQK     KEVKD L G+KVEAEQLE+SGLTEEH
Sbjct: 61  SKDKKHKSKERKEHKGKSSRSQ-GLNDQKHDKCFKEVKD-LDGSKVEAEQLERSGLTEEH 120

Query: 121 GQPVWPQSPGYLSDGTQSNHKRKRGASLQPNEDCKPGKVIRIKL--ASSLSQQEDSSAGS 180
           GQPVWPQSP YLSDGTQ +HKRKR A+ QP+E CKPGK+IRIKL  ASSLSQQEDSSAGS
Sbjct: 121 GQPVWPQSPAYLSDGTQIDHKRKREAATQPDEGCKPGKIIRIKLASASSLSQQEDSSAGS 180

Query: 181 EQTCSTTGRRNSLHQTRDENS 184
           EQ CST+GR NS+ Q  D +S
Sbjct: 181 EQMCSTSGRYNSVDQKTDGDS 199

[Close]

BLAST of CmaCh12G003980 vs. TrEMBL
Match: E6NTZ5_JATCU (JHL20J20.12 protein OS=Jatropha curcas GN=JHL20J20.12 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.3e-30
Identity = 129/354 (36.44%), Postives = 184/354 (51.98%), Query Frame = 1


Query: 1   MSRCFPYPPPGYARKVARTEAALIESIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRCFPYPP GY R  AR EA + ESIK+ SE  +  TE  K K K KKE+ K+KK + K
Sbjct: 1   MSRCFPYPPLGYLRNGARGEA-VSESIKIQSEWGKARTEHDKRK-KEKKERKKEKKERKK 60

Query: 61  EHRD-KSSRSRRDSTDQKQKEVKDLLQGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG 120
             ++ K      D  +Q+ K +      +KV+ E+ E+SGLTEEH QPV  QS  Y  D 
Sbjct: 61  SRKENKEDTYIADRCNQQDKRLP-----SKVQEEEAERSGLTEEHDQPVCSQSLCYSPDS 120

Query: 121 TQSNHKRKRGASLQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTR 180
           T+S+ KRKR   L  N     G +IRI+L     ++ D+S   E   S++          
Sbjct: 121 TRSSDKRKRD-DLSYNITKSSGNIIRIRLPLQKHREVDASTSGEHVRSSS---------- 180

Query: 181 DENSSRVPIVQKTSFTSLDQKRVENSSRVPIVQKTSLTSLDQKRDENSRSRPIVQKTSLT 240
                     +K+ F  L QK++     + +  K   +S++ K   N  S PIV   +  
Sbjct: 181 ----------RKSDF--LAQKQI-----ITVPDKEQPSSINSKTGINI-SDPIVTPCANL 240

Query: 241 IADTAVAVQDPISEPNIKDLPLHAVDIGSTHRKRKPSESAYEDLFDKWVPPTLQLGQQTV 300
            AD          + +++   + A  + S  R  + +ES Y+DL + WVP  L   Q  +
Sbjct: 241 EAD----------KDSVRKRVITASGVSSRVRGVQNAESLYKDLLEDWVPLPLGCDQNNI 300

Query: 301 -DEEWLFGTKKQDERTKTNQAFSHAPICRRSSLWPRGQFVPEADVYLLPYTIPF 353
            D+EWLFGTKKQ E+ K  ++    P    S+LWP  +++PEA+VY LPYT+PF
Sbjct: 301 GDQEWLFGTKKQ-EKHKRLKSQCDEPCHGSSTLWPCARYLPEAEVYALPYTVPF 307

[Close]

BLAST of CmaCh12G003980 vs. TrEMBL
Match: A0A022RG69_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008728mg PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.2e-27
Identity = 134/383 (34.99%), Postives = 196/383 (51.17%), Query Frame = 1


Query: 1   MSRCFPYPPPGYARKVARTEAALIESIKLLSERREKGTERKKEKSKHKKEKSKDKKHKS- 60
           MSRCFPYPPPGY       E ALIESIK+  + + K  ERKK++ + KKEK K+KK KS 
Sbjct: 1   MSRCFPYPPPGYTLSGDGKE-ALIESIKIQKD-KVKSEERKKDRKREKKEKKKEKKQKST 60

Query: 61  ----KEHRDKSSRSRRDSTDQKQKEV------KDLLQG-TKVEAEQLEKSGLTEEHGQPV 120
               +++ +KS        D+K +        + LLQ  +K EA+QLE+S LTEE G+PV
Sbjct: 61  HKDNEKNHEKSLNVAHGHIDKKSRAAAADVKGQSLLQKVSKAEADQLERSSLTEERGKPV 120

Query: 121 WPQSPGYLSDGTQSNHKRKRGASLQPNEDC--KPGKVIRIKLASSLSQQE--DSSAGSE- 180
               P   +D T++++KRKR +S     DC   PGK+IRIKL+S        D+S   + 
Sbjct: 121 --VLPSTSADSTENSNKRKRQSS---PLDCARAPGKIIRIKLSSKNQNPSPIDASVNEQQ 180

Query: 181 --QTCSTTGRRNSLHQTRDENSSRVPIVQKTSFTSLDQKRVENSSRVPIVQKTSLTSLDQ 240
             QTCST+GR +     +DE    V   Q+T     D       +++P++ +  + S  Q
Sbjct: 181 QTQTCSTSGRPSFPSFNKDE----VVFRQRTE----DLSSCTLKAQIPVIGRDPICSSSQ 240

Query: 241 KRDE-NSRSRPIVQKTSLTIADTAVAVQDPISEPNIKDLPLHAVDIGSTHRKRKPSESA- 300
           + +    +  P+   T+       V  +D  S P     P+  V         +   +A 
Sbjct: 241 QIEHVPVQKMPVPSVTTPMQRSALVTGKDICSIPK----PIEPVQKTPAPHLSRVQRNAL 300

Query: 301 -YEDLFDKWVPPTLQ--LGQQTVDEEWLFGTKKQDERTKTNQ-----AFSHAPICRRSS- 353
            Y++L + W PP L+  L + T D +WLF  KK  E   + +     + + A  C  SS 
Sbjct: 301 RYKNLTEMWAPPQLEFALPEDTDDVDWLFKGKKNQEGISSEKRCCSTSVNDAKSCSSSSI 360

[Close]

BLAST of CmaCh12G003980 vs. TrEMBL
Match: W9SCM9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026647 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.0e-24
Identity = 135/409 (33.01%), Postives = 192/409 (46.94%), Query Frame = 1


Query: 1   MSRCFPYPPPGYARKVARTEAALIESIK------------LLSERREKGTERKKEKSKHK 60
           MSRCFPYPPPGY +   R EA L+ESIK            L  E  +   ER KEK   K
Sbjct: 1   MSRCFPYPPPGYEKNGIRDEA-LVESIKYVLIDNHFGNQKLQREGEKAKKERNKEKKWEK 60

Query: 61  KEKSKDKKHKSKEHRDKSSRSRRDSTDQKQKEVKDLLQGTKVEAEQLEKSGLTEEHGQPV 120
           KEK K +++       +S + R    DQ+ K+ +D  +  K+E E LE+S LTEEHGQPV
Sbjct: 61  KEKDKARENGEAGKEKQSHKKRHREEDQESKKGRDHDKKRKLETENLERSNLTEEHGQPV 120

Query: 121 WPQSPGYLSDGTQSNHKRKRGASLQPNEDC-KPGKVIRIKLASSLSQQEDSSAGSEQTCS 180
             Q+    SD T +++KR+   S  P E C   G +IRI+L     +  +     EQ+CS
Sbjct: 121 GSQNS---SDSTVNSNKRRNPCS--PAESCHNSGSIIRIRLPLQRHKDPEILPSKEQSCS 180

Query: 181 TTGR-RNSLHQTR-DENSSRVPIVQ------KTSFTSLDQKRVENSSRVPIVQKTSLTSL 240
            +GR  N+  Q R  E +SR    Q       TS  +L Q  V  +SR+    +++  S+
Sbjct: 181 ASGRTHNAFVQGRPSEPASRQGKEQGEHHPCSTSTRNLSQ--VAKNSRLSKEHRSTTKSV 240

Query: 241 DQKR----------------DENSRSRPIVQKTSLTIADTAVAVQDPISE----PNIKDL 300
           D  +                D +  SR I +K   T     ++    + +    P  K +
Sbjct: 241 DLSQNSRLIKENHCSTTKSVDLSQNSRLIKEKHCPTTKSVDLSQNSRLIKEKHCPTTKSV 300

Query: 301 PL----HAVDIGST---HRKRKPSESAYEDLFDKWVPPTLQ-----LGQQTVDEEWLFGT 352
            +     ++ + ST        P  S Y DLF+ WVPP +Q     LG +T    WLF +
Sbjct: 301 DISHKAESIPMLSTSPHFPPLPPMVSQYRDLFENWVPPPMQDDCMELGVET----WLFKS 360

[Close]

BLAST of CmaCh12G003980 vs. TrEMBL
Match: B9R8C6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1598640 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.6e-23
Identity = 122/358 (34.08%), Postives = 169/358 (47.21%), Query Frame = 1


Query: 1   MSRCFPYPPPGYARKVARTEAALIESIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRCFPYPPPG+ R  AR EA + ESIK   + +E  TE    K K K+EK K  K   K
Sbjct: 1   MSRCFPYPPPGHLRNGARGEA-VSESIK--KDWKEAITEHDIRKKKDKREKEKRVKKSRK 60

Query: 61  EHRDKSSRSRRDSTDQKQKEVKDLLQGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT 120
           E +D  S +  + TD      K+LL+G + EAE   +S LTEEH  PV  QS  Y  D T
Sbjct: 61  EKKDACSVATCNQTD------KNLLKGKEEEAE---RSSLTEEHEPPVCSQSLCYSPDST 120

Query: 121 QSNHKRKRGASLQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD 180
           +S+ KRK   S+  N     G VIRI+L      +  +SA  EQ+CST+G+  S      
Sbjct: 121 RSSKKRKGDDSVY-NATKTHGNVIRIRLPLQRHIEPIASANGEQSCSTSGKNLS------ 180

Query: 181 ENSSRVPIVQKTSFTSLDQKRVENSSRVPIVQKTSLTSLDQKRDENSRSRPIVQKTSLTI 240
                            +Q++V     + I ++   ++++ K  E+  S PI        
Sbjct: 181 -----------------EQEQV-----ITISRREHCSTINFKAAEDITSAPI-------- 240

Query: 241 ADTAVAVQDPISEPNIKDLPLHAVDIGSTHRKRKP---SESAYEDLFDKWVPPTLQLGQQ 300
                    PI   +++     A     T +K K    +ES Y+ LF+ W P  +   QQ
Sbjct: 241 --------KPILTADLERKEKSARLSSKTEKKEKKLYKAESRYKALFEDWAPLPVGFAQQ 300

Query: 301 TV--DEEWLFGTKKQDERTKTNQAFSH-APICRRSSLWPRGQFVPEADVYLLPYTIPF 353
               D +WL  +K+Q+         SH  P       WP  +F+P AD+Y LPYTIPF
Sbjct: 301 NNFDDCDWLCCSKRQERSRDKRLQISHDEPANEGLGFWPCARFLPHADIYALPYTIPF 301

[Close]

BLAST of CmaCh12G003980 vs. TAIR10
Match: AT1G75860.1 (AT1G75860.1 unknown protein)

HSP 1 Score: 63.9 bits (154), Expect = 2.2e-10
Identity = 36/106 (33.96%), Postives = 53/106 (50.00%), Query Frame = 1


Query: 253 EPNIKDLPLHAVDIGSTHRKRKPS-ESAYEDLFDKWVPPTLQLGQQTVDEE---WLFGTK 312
           E N+    + A+D     +K + S E  Y  LFD W PP++ +   + ++    WLFG K
Sbjct: 192 EKNLPSTSIAAIDETKKRKKHRSSKEDQYNALFDGWTPPSMCIADASSNDNGDYWLFGNK 251

Query: 313 KQDE-RTKTNQAFSHAPICRRS-SLWPRGQFVPEADVYLLPYTIPF 353
            Q+  + K         + R   S WPR QF+ E  +Y LPYT+PF
Sbjct: 252 TQEVLKPKAAVKVDDDTMMRPGDSSWPRAQFLSEVGIYSLPYTVPF 297

[Close]

BLAST of CmaCh12G003980 vs. TAIR10
Match: AT2G17787.1 (AT2G17787.1 unknown protein)

HSP 1 Score: 58.9 bits (141), Expect = 7.2e-09
Identity = 101/371 (27.22%), Postives = 155/371 (41.78%), Query Frame = 1


Query: 1   MSRCFPYPPPGYARKVARTEAALIESIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRC+P+PPPGY  K      +LIESIK        G + + +K +  K   KD+K +  
Sbjct: 1   MSRCYPFPPPGYVWK-----ESLIESIK--------GAKEEVKKDRKHKRNEKDRKDRDN 60

Query: 61  EHRDKSSRSRRDSTDQKQKEVKDLLQGTKV--EAEQLEKSGLTEEHGQPVWPQSPGYLSD 120
           E    + RSR+    +++K+   +  G  V  E E LEKS  T E       Q+     D
Sbjct: 61  E----AGRSRKHRHKRRRKDEGAIASGKLVSSEVELLEKSCQTVELELQTSSQNS---CD 120

Query: 121 GTQSNHKRKRGASLQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQT 180
            T  +++R +    QP ++      IR +L      QED   G   T     +R S    
Sbjct: 121 STLHSNERPKQIQSQPLDETS----IRTRLPDK--GQEDPEDGVMMTSKDQKQRFSREML 180

Query: 181 RDENSSRVPIVQKTSFTSLDQKRVE---NSSRVPIV----QKTSLTSLDQKRDENSRSRP 240
               ++  P           +KR++    SSR        +K S+ S D ++    +  P
Sbjct: 181 DASQAATAPNESVGHSRVCQEKRIDPTFGSSREITTKLNKEKKSVPSKDNRKVSKEKKMP 240

Query: 241 IVQKTSLTIADTAVAVQDPISEPNIKDLPLHAVDIGSTH---RKRKPSESAYE-DLFDKW 300
            +   +            P+ +   K    H    G +    RK  PS +    +L + W
Sbjct: 241 SLSSCN------------PLEQE--KPTSSHQETPGPSKLLCRKCPPSMAGQLLNLIENW 300

Query: 301 VPPTLQLG-QQTVDEEWL----FGTKK-QDERTKTNQAFSHAPICRRSSLWPRGQFVPEA 353
            P  ++     + D+EW     FG K  Q    KTNQ  S       S +WP  +F+PEA
Sbjct: 301 APDRVESKLTDSEDQEWWLFIKFGAKSPQVSNQKTNQGSS-------SMVWPTARFLPEA 324

[Close]

BLAST of CmaCh12G003980 vs. TAIR10
Match: AT1G20100.1 (AT1G20100.1 unknown protein)

HSP 1 Score: 50.8 bits (120), Expect = 2.0e-06
Identity = 62/252 (24.60%), Postives = 104/252 (41.27%), Query Frame = 1


Query: 125 KRKRGASLQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCS------TTGRRNSLHQT 184
           ++K+   L+  +     K    K  S  S+Q + S  +E+         + G +NS  + 
Sbjct: 45  EKKKEKKLKKEKKSLEQKYSTTKTVSYESEQLEKSCLTEEFEQPQVGYLSDGSQNSKKRR 104

Query: 185 RDENSSRV-------PIVQKTSFTSLDQKRVENSSRVPIVQKTSLTSLDQKRDE--NSRS 244
           R+ + + V       P+  K     +  K+ + +  VP       TS  Q+  E  +S S
Sbjct: 105 RETSPAVVESQIKATPVAGKPLRIRIVFKKPKEAEAVPQEDPVCSTSGTQRPSELPSSVS 164

Query: 245 RPIVQKTSLTIADTAVAVQDPISEPNIKDLPLHAVDIGSTHRKRKPS-ESAYEDLFDKWV 304
            P       +I D  VAV     E       +  +      +K KPS ES Y  LFD+ V
Sbjct: 165 LP-------SICDHDVAVPSTSLESG----KVAIISESKKRKKHKPSKESRYNSLFDELV 224

Query: 305 PPTLQLGQ-QTVDEEWLFGTKKQDERTKTNQAFS-------HAPICRRSSLWPRGQFVPE 353
           PP + L +  +  ++WLFGT +++  +    ++             R  S  PR   + E
Sbjct: 225 PPCISLEEDDSSSDDWLFGTSRKENVSSAKSSYKTDEDTIMSLQTSRDCSSLPRAMLLSE 284

[Close]

BLAST of CmaCh12G003980 vs. NCBI nr
Match: gi|659089111|ref|XP_008445332.1| (PREDICTED: DNA ligase 1-like [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 1.9e-56
Identity = 149/237 (62.87%), Postives = 171/237 (72.15%), Query Frame = 1


Query: 1   MSRCFPYPPPGYARKVARTEAALIESIKLLSERREKGTER------KKEKSKHKKEKSKD 60
           MSRCFPYPPPGY RKVA TEAALIESIKL SER+ K   +      KKEKSK KKE+SKD
Sbjct: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERQSKNDRKNEKRRHKKEKSKDKKERSKD 60

Query: 61  KKHKSKE---HRDKSSRSRRDSTDQKQ----KEVKDLLQGTKVEAEQLEKSGLTEEHGQP 120
           KKHKSKE   H++KSS SR    DQK     KEVKDLL GTKVEAEQLE+SGLTEEHGQP
Sbjct: 61  KKHKSKERKEHKEKSSHSR-SLNDQKHNKCLKEVKDLLDGTKVEAEQLERSGLTEEHGQP 120

Query: 121 VWPQSPGYLSDGTQSNHKRKRGASLQPNEDCKPGKVIRIKLAS--SLSQQEDSSAGSEQT 180
           VWPQSP YLSDGTQ +HKRKR A  QP+E CKPGK+IRIKLAS  SLSQQEDS+AGSEQ 
Sbjct: 121 VWPQSPAYLSDGTQIDHKRKRQAETQPDEGCKPGKIIRIKLASAPSLSQQEDSAAGSEQM 180

Query: 181 CSTTGRRNSLHQTRDENSSRVPIVQKTSFT---SLDQKRVENSSRVPIVQKTSLTSL 220
           CST+GR NS  Q  D +S       +T+     +L   ++E+    PI  + S +++
Sbjct: 181 CSTSGRYNSFDQKTDGDSHGSVANAETAVAVHPTLSNPKIEHPPLHPIGDRNSKSTV 236

[Close]

BLAST of CmaCh12G003980 vs. NCBI nr
Match: gi|449450500|ref|XP_004143000.1| (PREDICTED: uncharacterized protein LOC101215840 [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 3.1e-54
Identity = 142/201 (70.65%), Postives = 157/201 (78.11%), Query Frame = 1


Query: 1   MSRCFPYPPPGYARKVARTEAALIESIKLLSERREKGTER---------KKEKSKHKKEK 60
           MSRCFPYPPPGY RKVA TEAALIESIKL SER+ K   +         KKEKSK+KKE+
Sbjct: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERQSKNDRKNEKRRHKKEKKEKSKNKKER 60

Query: 61  SKDKKHKSKE---HRDKSSRSRRDSTDQKQ----KEVKDLLQGTKVEAEQLEKSGLTEEH 120
           SKDKKHKSKE   H+ KSSRS+    DQK     KEVKD L G+KVEAEQLE+SGLTEEH
Sbjct: 61  SKDKKHKSKERKEHKGKSSRSQ-GLNDQKHDKCFKEVKD-LDGSKVEAEQLERSGLTEEH 120

Query: 121 GQPVWPQSPGYLSDGTQSNHKRKRGASLQPNEDCKPGKVIRIKL--ASSLSQQEDSSAGS 180
           GQPVWPQSP YLSDGTQ +HKRKR A+ QP+E CKPGK+IRIKL  ASSLSQQEDSSAGS
Sbjct: 121 GQPVWPQSPAYLSDGTQIDHKRKREAATQPDEGCKPGKIIRIKLASASSLSQQEDSSAGS 180

Query: 181 EQTCSTTGRRNSLHQTRDENS 184
           EQ CST+GR NS+ Q  D +S
Sbjct: 181 EQMCSTSGRYNSVDQKTDGDS 199

[Close]

BLAST of CmaCh12G003980 vs. NCBI nr
Match: gi|802607356|ref|XP_012073759.1| (PREDICTED: uncharacterized protein LOC105635312 [Jatropha curcas])

HSP 1 Score: 142.1 bits (357), Expect = 1.8e-30
Identity = 129/354 (36.44%), Postives = 184/354 (51.98%), Query Frame = 1


Query: 1   MSRCFPYPPPGYARKVARTEAALIESIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRCFPYPP GY R  AR EA + ESIK+ SE  +  TE  K K K KKE+ K+KK + K
Sbjct: 1   MSRCFPYPPLGYLRNGARGEA-VSESIKIQSEWGKARTEHDKRK-KEKKERKKEKKERKK 60

Query: 61  EHRD-KSSRSRRDSTDQKQKEVKDLLQGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDG 120
             ++ K      D  +Q+ K +      +KV+ E+ E+SGLTEEH QPV  QS  Y  D 
Sbjct: 61  SRKENKEDTYIADRCNQQDKRLP-----SKVQEEEAERSGLTEEHDQPVCSQSLCYSPDS 120

Query: 121 TQSNHKRKRGASLQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTR 180
           T+S+ KRKR   L  N     G +IRI+L     ++ D+S   E   S++          
Sbjct: 121 TRSSDKRKRD-DLSYNITKSSGNIIRIRLPLQKHREVDASTSGEHVRSSS---------- 180

Query: 181 DENSSRVPIVQKTSFTSLDQKRVENSSRVPIVQKTSLTSLDQKRDENSRSRPIVQKTSLT 240
                     +K+ F  L QK++     + +  K   +S++ K   N  S PIV   +  
Sbjct: 181 ----------RKSDF--LAQKQI-----ITVPDKEQPSSINSKTGINI-SDPIVTPCANL 240

Query: 241 IADTAVAVQDPISEPNIKDLPLHAVDIGSTHRKRKPSESAYEDLFDKWVPPTLQLGQQTV 300
            AD          + +++   + A  + S  R  + +ES Y+DL + WVP  L   Q  +
Sbjct: 241 EAD----------KDSVRKRVITASGVSSRVRGVQNAESLYKDLLEDWVPLPLGCDQNNI 300

Query: 301 -DEEWLFGTKKQDERTKTNQAFSHAPICRRSSLWPRGQFVPEADVYLLPYTIPF 353
            D+EWLFGTKKQ E+ K  ++    P    S+LWP  +++PEA+VY LPYT+PF
Sbjct: 301 GDQEWLFGTKKQ-EKHKRLKSQCDEPCHGSSTLWPCARYLPEAEVYALPYTVPF 307

[Close]

BLAST of CmaCh12G003980 vs. NCBI nr
Match: gi|848870189|ref|XP_012835702.1| (PREDICTED: uncharacterized protein LOC105956404 [Erythranthe guttata])

HSP 1 Score: 131.3 bits (329), Expect = 3.2e-27
Identity = 134/383 (34.99%), Postives = 196/383 (51.17%), Query Frame = 1


Query: 1   MSRCFPYPPPGYARKVARTEAALIESIKLLSERREKGTERKKEKSKHKKEKSKDKKHKS- 60
           MSRCFPYPPPGY       E ALIESIK+  + + K  ERKK++ + KKEK K+KK KS 
Sbjct: 1   MSRCFPYPPPGYTLSGDGKE-ALIESIKIQKD-KVKSEERKKDRKREKKEKKKEKKQKST 60

Query: 61  ----KEHRDKSSRSRRDSTDQKQKEV------KDLLQG-TKVEAEQLEKSGLTEEHGQPV 120
               +++ +KS        D+K +        + LLQ  +K EA+QLE+S LTEE G+PV
Sbjct: 61  HKDNEKNHEKSLNVAHGHIDKKSRAAAADVKGQSLLQKVSKAEADQLERSSLTEERGKPV 120

Query: 121 WPQSPGYLSDGTQSNHKRKRGASLQPNEDC--KPGKVIRIKLASSLSQQE--DSSAGSE- 180
               P   +D T++++KRKR +S     DC   PGK+IRIKL+S        D+S   + 
Sbjct: 121 --VLPSTSADSTENSNKRKRQSS---PLDCARAPGKIIRIKLSSKNQNPSPIDASVNEQQ 180

Query: 181 --QTCSTTGRRNSLHQTRDENSSRVPIVQKTSFTSLDQKRVENSSRVPIVQKTSLTSLDQ 240
             QTCST+GR +     +DE    V   Q+T     D       +++P++ +  + S  Q
Sbjct: 181 QTQTCSTSGRPSFPSFNKDE----VVFRQRTE----DLSSCTLKAQIPVIGRDPICSSSQ 240

Query: 241 KRDE-NSRSRPIVQKTSLTIADTAVAVQDPISEPNIKDLPLHAVDIGSTHRKRKPSESA- 300
           + +    +  P+   T+       V  +D  S P     P+  V         +   +A 
Sbjct: 241 QIEHVPVQKMPVPSVTTPMQRSALVTGKDICSIPK----PIEPVQKTPAPHLSRVQRNAL 300

Query: 301 -YEDLFDKWVPPTLQ--LGQQTVDEEWLFGTKKQDERTKTNQ-----AFSHAPICRRSS- 353
            Y++L + W PP L+  L + T D +WLF  KK  E   + +     + + A  C  SS 
Sbjct: 301 RYKNLTEMWAPPQLEFALPEDTDDVDWLFKGKKNQEGISSEKRCCSTSVNDAKSCSSSSI 360

[Close]

BLAST of CmaCh12G003980 vs. NCBI nr
Match: gi|1000987209|ref|XP_015577334.1| (PREDICTED: uncharacterized protein LOC8274696 [Ricinus communis])

HSP 1 Score: 122.1 bits (305), Expect = 2.0e-24
Identity = 122/358 (34.08%), Postives = 169/358 (47.21%), Query Frame = 1


Query: 1   MSRCFPYPPPGYARKVARTEAALIESIKLLSERREKGTERKKEKSKHKKEKSKDKKHKSK 60
           MSRCFPYPPPG+ R  AR EA + ESIK   + +E  TE    K K K+EK K  K   K
Sbjct: 1   MSRCFPYPPPGHLRNGARGEA-VSESIKFQKDWKEAITEHDIRKKKDKREKEKRVKKSRK 60

Query: 61  EHRDKSSRSRRDSTDQKQKEVKDLLQGTKVEAEQLEKSGLTEEHGQPVWPQSPGYLSDGT 120
           E +D  S +  + TD      K+LL+G + EAE   +S LTEEH  PV  QS  Y  D T
Sbjct: 61  EKKDACSVATCNQTD------KNLLKGKEEEAE---RSSLTEEHEPPVCSQSLCYSPDST 120

Query: 121 QSNHKRKRGASLQPNEDCKPGKVIRIKLASSLSQQEDSSAGSEQTCSTTGRRNSLHQTRD 180
           +S+ KRK   S+  N     G VIRI+L      +  +SA  EQ+CST+G+  S      
Sbjct: 121 RSSKKRKGDDSVY-NATKTHGNVIRIRLPLQRHIEPIASANGEQSCSTSGKNLS------ 180

Query: 181 ENSSRVPIVQKTSFTSLDQKRVENSSRVPIVQKTSLTSLDQKRDENSRSRPIVQKTSLTI 240
                            +Q++V     + I ++   ++++ K  E+  S PI        
Sbjct: 181 -----------------EQEQV-----ITISRREHCSTINFKAAEDITSAPI-------- 240

Query: 241 ADTAVAVQDPISEPNIKDLPLHAVDIGSTHRKRKP---SESAYEDLFDKWVPPTLQLGQQ 300
                    PI   +++     A     T +K K    +ES Y+ LF+ W P  +   QQ
Sbjct: 241 --------KPILTADLERKEKSARLSSKTEKKEKKLYKAESRYKALFEDWAPLPVGFAQQ 300

Query: 301 TV--DEEWLFGTKKQDERTKTNQAFSH-APICRRSSLWPRGQFVPEADVYLLPYTIPF 353
               D +WL  +K+Q+         SH  P       WP  +F+P AD+Y LPYTIPF
Sbjct: 301 NNFDDCDWLCCSKRQERSRDKRLQISHDEPANEGLGFWPCARFLPHADIYALPYTIPF 303

The following BLAST results are available for this feature:

BLAST of CmaCh12G003980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh12G003980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK14_CUCSA	2.2e-54	70.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345960 PE=4 SV=1	[more]
E6NTZ5_JATCU	1.3e-30	36.44	JHL20J20.12 protein OS=Jatropha curcas GN=JHL20J20.12 PE=4 SV=1	[more]
A0A022RG69_ERYGU	2.2e-27	34.99	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008728mg PE=4 SV=1	[more]
W9SCM9_9ROSA	3.0e-24	33.01	Uncharacterized protein OS=Morus notabilis GN=L484_026647 PE=4 SV=1	[more]
B9R8C6_RICCO	2.6e-23	34.08	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1598640 PE=4 SV=1	[more]

BLAST of CmaCh12G003980 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G75860.1	2.2e-10	33.96	unknown protein	[more]
AT2G17787.1	7.2e-09	27.22	unknown protein	[more]
AT1G20100.1	2.0e-06	24.60	unknown protein	[more]

BLAST of CmaCh12G003980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089111\|ref\|XP_008445332.1\|	1.9e-56	62.87	PREDICTED: DNA ligase 1-like [Cucumis melo]	[more]
gi\|449450500\|ref\|XP_004143000.1\|	3.1e-54	70.65	PREDICTED: uncharacterized protein LOC101215840 [Cucumis sativus]	[more]
gi\|802607356\|ref\|XP_012073759.1\|	1.8e-30	36.44	PREDICTED: uncharacterized protein LOC105635312 [Jatropha curcas]	[more]
gi\|848870189\|ref\|XP_012835702.1\|	3.2e-27	34.99	PREDICTED: uncharacterized protein LOC105956404 [Erythranthe guttata]	[more]
gi\|1000987209\|ref\|XP_015577334.1\|	2.0e-24	34.08	PREDICTED: uncharacterized protein LOC8274696 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G003980.1	CmaCh12G003980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 78..98 scor
None	No IPR available	PANTHER	PTHR34660	FAMILY NOT NAMED	coord: 2..352 score: 3.7
None	No IPR available	PANTHER	PTHR34660:SF1	SUBFAMILY NOT NAMED	coord: 2..352 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh12G003980	Cucsa.393890	Cucumber (Gy14) v1	cgycmaB1089
CmaCh12G003980	Cla022409	Watermelon (97103) v1	cmawmB148
CmaCh12G003980	Csa2G345960	Cucumber (Chinese Long) v2	cmacuB177
CmaCh12G003980	MELO3C011353	Melon (DHL92) v3.5.1	cmameB162
CmaCh12G003980	ClCG08G014140	Watermelon (Charleston Gray)	cmawcgB169
CmaCh12G003980	CSPI02G16720	Wild cucumber (PI 183967)	cmacpiB178
CmaCh12G003980	CmoCh05G003220	Cucurbita moschata (Rifu)	cmacmoB199
CmaCh12G003980	CmoCh12G003490	Cucurbita moschata (Rifu)	cmacmoB176
CmaCh12G003980	Lsi08G013040	Bottle gourd (USVL1VR-Ls)	cmalsiB184
CmaCh12G003980	Cp4.1LG11g02700	Cucurbita pepo (Zucchini)	cmacpeB179
CmaCh12G003980	Cp4.1LG07g03500	Cucurbita pepo (Zucchini)	cmacpeB203
CmaCh12G003980	MELO3C011353.2	Melon (DHL92) v3.6.1	cmamedB177
CmaCh12G003980	CsaV3_2G024280	Cucumber (Chinese Long) v3	cmacucB0206
CmaCh12G003980	Cla97C08G157710	Watermelon (97103) v2	cmawmbB194
CmaCh12G003980	Bhi04G000104	Wax gourd	cmawgoB0195
CmaCh12G003980	CsGy2G016720	Cucumber (Gy14) v2	cgybcmaB183
CmaCh12G003980	Carg03983	Silver-seed gourd	carcmaB1349
CmaCh12G003980	Carg09393	Silver-seed gourd	carcmaB0183

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh12G003980	CmaCh05G003190	Cucurbita maxima (Rimu)	cmacmaB199

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh12G003980	Watermelon (97103) v2	cmawmbB164
CmaCh12G003980	Wax gourd	cmawgoB0218
CmaCh12G003980	Cucurbita maxima (Rimu)	cmacmaB185
CmaCh12G003980	Cucurbita maxima (Rimu)	cmacmaB205
CmaCh12G003980	Wild cucumber (PI 183967)	cmacpiB203
CmaCh12G003980	Cucumber (Chinese Long) v2	cmacuB200
CmaCh12G003980	Melon (DHL92) v3.5.1	cmameB187
CmaCh12G003980	Watermelon (97103) v1	cmawmB169
CmaCh12G003980	Bottle gourd (USVL1VR-Ls)	cmalsiB163
CmaCh12G003980	Cucumber (Gy14) v2	cgybcmaB721
CmaCh12G003980	Melon (DHL92) v3.6.1	cmamedB204
CmaCh12G003980	Cucumber (Chinese Long) v3	cmacucB0226