Cla022409 (gene) Watermelon (97103) v1

NameCla022409
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr8 : 23372890 .. 23374824 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACATGAGGAAGGTGGCTAGCACCGAGGCGGCCTTGATCGATTCGATTAAGGTTTGTTTCAGCTATTTGGTTGGTTTTCATAATATATGCTGGATTCAATTGTGTTCTGATTCCATTTGATTGCGAGATCTTCTTGGAATTGTAACTTTTTGGATGGGGGTATATCTGTAATCAGGAACGGCTTTTCTTGTAATTTTTGCGTCGATGGGGAAACGATGGATGTAGGTTTTCTTGTTTCGATTGGGTCCGAGAGTTACAAGTTTTGTACCCTAATGATTGGAATGTTGATTTTGGATAATTTGGACTAAGTTTCTAGGTTTAGTTTTGGTTCTTCTGTGTAATATCTCTGAAAGGAACAAGAGATCTTTGAGAGTTCGAGTGTATAGATAGTGGGTTAGGGTTCTGCTAGTTGCATGTCGTATTATTCGTTCTTGGATCTTGTATGGATGTATTCCCCCTTTCAAAATCCAAACACTTGAATAAACGTTTTGAACTTGTAATTTTTGATAGATAGTGTAATCATCATGTAAACGTCATGGTTTTCTAAATGCTTTTAAAACCCAGTTCCTTTTTCTTTCAAATGGATTGTTTTCTACAAGTTTTAAATGGAAGAGATTAGGGTTTTCCGTAAGTTTATTATAAACGCTTTTACATCAAATTTTTGTAGAACAATTTCTCCCTTGATATCTTCGGGCATGTGAATACATGACATGAATGTATGAGTTTGCTAGTTAGAATATGATGATTATCTGAGTCCAGATGAAATTCTTCTTTACAATAGGAAAGGAAAATAGCTACCCGTTTTTAAGGGCTGCATTATATTAGTTAAGGAATGGTTGATCTGTTTGGTGCTTTGTCGTCTGCTCTTTTTGAACTGGTTATTCTGGTGCGTTATAGCTCCAATCTGAAAGACGACAGAGCAAGAATGATAGAAAGAAAGAGAAAAGTAAGCACAAGAAAGAGAAGAGCAAGGACAAGAAAGAGAGAAGTAAGGACAAGAAACATAAAAGCAAAGAACGTAAAGAAAAATCCTCCCATAGCCGCGACTTGAATGATCAGAAACAAAAGGAATGCTTAAACGAAGCCAAGGACCTTCTAAAGGGTACCAAAGTTGAAGCTGAACAATTAGAAGGTAGTGGTCTCACTGAAGAGCATGGACAACCTGTATGGCCTCAAAGCCCTGGCTACTTGTCTGACGGAACTCAGATCAGCCACAAGAGGAAAAGGGATGCTGCATTACGGCCTAATGATGGTTGTAAGCCTGGTGGGTTCTCTTTGTGGATAATAGGCACTTTTATGAAATAAGTTATATTGGCCACTTGAACAAACGCTAATATATTATTGATCTGATCGTACACAGGCAAAATCATCCGGATCAAACTGGCATCTTCACTGAGCCAGCAAGAGGATTCATCAGCTGGCAGTGAACAGACGTGTTCTACATCTGGTCGTGATATTTCTGTTGATCAAAAGAGAGATGAAAACAGCCGTGGATCTAATCAGCAAATTACTATCTTCACCAACGCTGAAACAGCTGTTGATGTCAATGTTCCAACTTCGTCCAAACCAATGATTGTAGACCCTCCTTTGCATCCCATCAAGGACATTAGTTCTAAGGGGGGTAATGTTGTGTCATTACCTCCTCGCATCAGAAGTCCTGCTGATTCTGCTTATGAGGCCTTGTTTAATAAATGGGTAGCACCACCACTTCAGTTGGAGCAACAAACCGATGATGAAGAATGGCTCTTTGGAAGAACAAGAAAGCAAGATGGACCAAGTATCATGACCAACAAAGCTTTCAGTTCTGTTCCCAGCTGTGGTAGAAGTTCAAGTTTGTGGCCGAGGGGACAATATCTTGCCGATGCTGATGTTTATTCATTACCTTATACGATCCCATTTTGA

mRNA sequence

ATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACATGAGGAAGGTGGCTAGCACCGAGGCGGCCTTGATCGATTCGATTAAGCTCCAATCTGAAAGACGACAGAGCAAGAATGATAGAAAGAAAGAGAAAAGTAAGCACAAGAAAGAGAAGAGCAAGGACAAGAAAGAGAGAAGTAAGGACAAGAAACATAAAAGCAAAGAACGTAAAGAAAAATCCTCCCATAGCCGCGACTTGAATGATCAGAAACAAAAGGAATGCTTAAACGAAGCCAAGGACCTTCTAAAGGGTACCAAAGTTGAAGCTGAACAATTAGAAGGTAGTGGTCTCACTGAAGAGCATGGACAACCTGTATGGCCTCAAAGCCCTGGCTACTTGTCTGACGGAACTCAGATCAGCCACAAGAGGAAAAGGGATGCTGCATTACGGCCTAATGATGGTTGCAAAATCATCCGGATCAAACTGGCATCTTCACTGAGCCAGCAAGAGGATTCATCAGCTGGCAGTGAACAGACGTGTTCTACATCTGGTCGTGATATTTCTGTTGATCAAAAGAGAGATGAAAACAGCCGTGGATCTAATCAGCAAATTACTATCTTCACCAACGCTGAAACAGCTGTTGATGTCAATGTTCCAACTTCGTCCAAACCAATGATTGTAGACCCTCCTTTGCATCCCATCAAGGACATTAGTTCTAAGGGGGGTAATGTTGTGTCATTACCTCCTCGCATCAGAAGTCCTGCTGATTCTGCTTATGAGGCCTTGTTTAATAAATGGGTAGCACCACCACTTCAGTTGGAGCAACAAACCGATGATGAAGAATGGCTCTTTGGAAGAACAAGAAAGCAAGATGGACCAAGTATCATGACCAACAAAGCTTTCAGTTCTGTTCCCAGCTGTGGTAGAAGTTCAAGTTTGTGGCCGAGGGGACAATATCTTGCCGATGCTGATGTTTATTCATTACCTTATACGATCCCATTTTGA

Coding sequence (CDS)

ATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACATGAGGAAGGTGGCTAGCACCGAGGCGGCCTTGATCGATTCGATTAAGCTCCAATCTGAAAGACGACAGAGCAAGAATGATAGAAAGAAAGAGAAAAGTAAGCACAAGAAAGAGAAGAGCAAGGACAAGAAAGAGAGAAGTAAGGACAAGAAACATAAAAGCAAAGAACGTAAAGAAAAATCCTCCCATAGCCGCGACTTGAATGATCAGAAACAAAAGGAATGCTTAAACGAAGCCAAGGACCTTCTAAAGGGTACCAAAGTTGAAGCTGAACAATTAGAAGGTAGTGGTCTCACTGAAGAGCATGGACAACCTGTATGGCCTCAAAGCCCTGGCTACTTGTCTGACGGAACTCAGATCAGCCACAAGAGGAAAAGGGATGCTGCATTACGGCCTAATGATGGTTGCAAAATCATCCGGATCAAACTGGCATCTTCACTGAGCCAGCAAGAGGATTCATCAGCTGGCAGTGAACAGACGTGTTCTACATCTGGTCGTGATATTTCTGTTGATCAAAAGAGAGATGAAAACAGCCGTGGATCTAATCAGCAAATTACTATCTTCACCAACGCTGAAACAGCTGTTGATGTCAATGTTCCAACTTCGTCCAAACCAATGATTGTAGACCCTCCTTTGCATCCCATCAAGGACATTAGTTCTAAGGGGGGTAATGTTGTGTCATTACCTCCTCGCATCAGAAGTCCTGCTGATTCTGCTTATGAGGCCTTGTTTAATAAATGGGTAGCACCACCACTTCAGTTGGAGCAACAAACCGATGATGAAGAATGGCTCTTTGGAAGAACAAGAAAGCAAGATGGACCAAGTATCATGACCAACAAAGCTTTCAGTTCTGTTCCCAGCTGTGGTAGAAGTTCAAGTTTGTGGCCGAGGGGACAATATCTTGCCGATGCTGATGTTTATTCATTACCTTATACGATCCCATTTTGA

Protein sequence

MSRCFPYPPPGYMRKVASTEAALIDSIKLQSERRQSKNDRKKEKSKHKKEKSKDKKERSKDKKHKSKERKEKSSHSRDLNDQKQKECLNEAKDLLKGTKVEAEQLEGSGLTEEHGQPVWPQSPGYLSDGTQISHKRKRDAALRPNDGCKIIRIKLASSLSQQEDSSAGSEQTCSTSGRDISVDQKRDENSRGSNQQITIFTNAETAVDVNVPTSSKPMIVDPPLHPIKDISSKGGNVVSLPPRIRSPADSAYEALFNKWVAPPLQLEQQTDDEEWLFGRTRKQDGPSIMTNKAFSSVPSCGRSSSLWPRGQYLADADVYSLPYTIPF
BLAST of Cla022409 vs. Swiss-Prot
Match: RPOC2_CRYJA (DNA-directed RNA polymerase subunit beta'' OS=Cryptomeria japonica GN=rpoC2 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.5e-06
Identity = 31/65 (47.69%), Postives = 42/65 (64.62%), Query Frame = 1

Query: 20   EAALIDSIKLQSERRQSKNDRKKEKSKHKKEKSKDKKERSKDKKHKSKERKEKSSHSRDL 79
            + ALI S+K   ++  SKN  KKE SK+KKE SK+KKE SK+KK  SK +KE S + ++ 
Sbjct: 1153 DQALILSLK---QKETSKN--KKETSKNKKETSKNKKETSKNKKETSKNKKETSKNKKEA 1212

Query: 80   NDQKQ 85
            +  K+
Sbjct: 1213 SKNKK 1212


HSP 2 Score: 49.7 bits (117), Expect = 7.2e-05
Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 1

Query: 40   RKKEKSKHKKEKSKDKKERSKDKKHKSKERKEKSSHSRDLNDQKQKECLNE 91
            ++KE SK+KKE SK+KKE SK+KK  SK +KE S + ++ +  K++   N+
Sbjct: 1161 KQKETSKNKKETSKNKKETSKNKKETSKNKKETSKNKKETSKNKKEASKNK 1211


HSP 3 Score: 40.8 bits (94), Expect = 3.3e-02
Identity = 23/55 (41.82%), Postives = 30/55 (54.55%), Query Frame = 1

Query: 45   SKHKKEKSKDKKERSKDKKHKSKERKEKSSHSRDLNDQKQKECLNEAKDLLKGTK 100
            S  +KE SK+KKE SK+KK  SK +KE S + ++ +  K KE     K+  K  K
Sbjct: 1159 SLKQKETSKNKKETSKNKKETSKNKKETSKNKKETSKNK-KETSKNKKEASKNKK 1212

BLAST of Cla022409 vs. Swiss-Prot
Match: TI214_OENBE (Protein TIC 214 (Fragment) OS=Oenothera berteroana GN=TIC214 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.5e-06
Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 1

Query: 30  QSERRQSKNDRKKEKSKHKKEKSKDKKERSKDKKHKSKERKEKSSHSRDLNDQKQ-KECL 89
           +S++ + K+ +KK KSK KK KSK KK +SK KK KSK+ + KS  +   + QK+ K   
Sbjct: 774 KSKQNEIKSKQKKVKSKQKKVKSKQKKVKSKQKKVKSKQNEIKSKQNEIKSKQKKVKRKQ 833

Query: 90  NEAKDLLKGTKVEAEQLEGSGL 111
           NE K  L   K +  ++   G+
Sbjct: 834 NEIKSKLNEVKRKQNEIYPKGV 855


HSP 2 Score: 42.0 bits (97), Expect = 1.5e-02
Identity = 29/71 (40.85%), Postives = 38/71 (53.52%), Query Frame = 1

Query: 37  KNDRKKEKSKHKKEKSKDKKERSKDKKHKSKERKEKSSHSRDLNDQKQ-KECLNEAKDLL 96
           K  +   KSK  + KSK KK +SK KK KSK++K KS   +  + Q + K   NE K   
Sbjct: 767 KKKKTISKSKQNEIKSKQKKVKSKQKKVKSKQKKVKSKQKKVKSKQNEIKSKQNEIKS-- 826

Query: 97  KGTKVEAEQLE 107
           K  KV+ +Q E
Sbjct: 827 KQKKVKRKQNE 835

BLAST of Cla022409 vs. TrEMBL
Match: A0A0A0LK14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345960 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.1e-121
Identity = 249/340 (73.24%), Postives = 268/340 (78.82%), Query Frame = 1

Query: 1   MSRCFPYPPPGYMRKVASTEAALIDSIKLQSERRQSKNDRKKEKSKHKKEK---SKDKKE 60
           MSRCFPYPPPGY+RKVASTEAALI+SIKLQSER QSKNDRK EK +HKKEK   SK+KKE
Sbjct: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSER-QSKNDRKNEKRRHKKEKKEKSKNKKE 60

Query: 61  RSKDKKHKSKERKE---KSSHSRDLNDQKQKECLNEAKDLLKGTKVEAEQLEGSGLTEEH 120
           RSKDKKHKSKERKE   KSS S+ LNDQK  +C  E KD L G+KVEAEQLE SGLTEEH
Sbjct: 61  RSKDKKHKSKERKEHKGKSSRSQGLNDQKHDKCFKEVKD-LDGSKVEAEQLERSGLTEEH 120

Query: 121 GQPVWPQSPGYLSDGTQISHKRKRDAALRPNDGC---KIIRIKL--ASSLSQQEDSSAGS 180
           GQPVWPQSP YLSDGTQI HKRKR+AA +P++GC   KIIRIKL  ASSLSQQEDSSAGS
Sbjct: 121 GQPVWPQSPAYLSDGTQIDHKRKREAATQPDEGCKPGKIIRIKLASASSLSQQEDSSAGS 180

Query: 181 EQTCSTSGRDISVDQKRDENSRGSNQQITIFTNAETAVDVNVPTSSKPMIVDPPLHPIKD 240
           EQ CSTSGR  SVDQK D +S GS        NAETAV V  PT S P     PLHPI+D
Sbjct: 181 EQMCSTSGRYNSVDQKTDGDSHGS------IANAETAVTV-FPTLSNP---KTPLHPIRD 240

Query: 241 ISSKGGNVVSLPPRIRSPADSAYEALFNKWVAPPLQLEQQTDDEEWLFGRTRKQDGPS-- 300
            S+    V S+P R RS A+SAYEALF KWVAPPL LEQQTDDEEWLFG TRKQDG S  
Sbjct: 241 -SNSTDKVASVPSRKRSSAESAYEALFEKWVAPPLLLEQQTDDEEWLFGTTRKQDGRSST 300

Query: 301 IMTNKAFSSVPSCGRSSSLWPRGQYLADADVYSLPYTIPF 328
           +  N A S+V SCGRSS+LWPRGQYL DADVYSLPYTIPF
Sbjct: 301 MANNNALSTVSSCGRSSNLWPRGQYLVDADVYSLPYTIPF 327

BLAST of Cla022409 vs. TrEMBL
Match: A0A068UGF8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024613001 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.8e-40
Identity = 130/335 (38.81%), Postives = 167/335 (49.85%), Query Frame = 1

Query: 1   MSRCFPYPPPGYMRKVASTEAALIDSIKLQSERRQSKNDRKKEKSKHKKEKSKDKKERSK 60
           MSRCFPYPPPGY+   A  EA LI+SIKLQ E  ++K DRKKEK + KKEK K   E  K
Sbjct: 1   MSRCFPYPPPGYILSKAGNEA-LIESIKLQKEWEKTKADRKKEKKREKKEKKK--AEEQK 60

Query: 61  DKKHKSKERKEKSSHSRDLNDQKQKECLNEAKDLLKGTKVEAEQLEGSGLTEEHGQPVWP 120
            ++ K+ +    +       + K      E KD       ++EQLE S +TEEH QPV  
Sbjct: 61  ARQTKASQFDHDACGGESWENVKGGFLQKERKD-------DSEQLERSSITEEHEQPVCS 120

Query: 121 QSPGYLSDGTQISHKRKR-DAALRPND-GCKIIRIKLASSLSQQEDSSAGSEQTCSTSGR 180
           Q+P Y SD TQ S+KRKR D  L        I+RI+L S    Q DS    E  CSTSGR
Sbjct: 121 QNPSYSSDSTQNSNKRKRHDPPLNATRVQGNILRIRLPSQKHIQHDSKDRDELLCSTSGR 180

Query: 181 -DISVDQKRDENSRGSNQQITIFTNAETAVDVNVPTSSKPMIVDPPLHPIKDISSK---G 240
            DI  + K   ++R    +    +     +   +P  S   +         D++S+    
Sbjct: 181 TDIPAEHK---DARADPDKSCSTSLGSDLILHGLPLRSDQGLARGNSSQQPDVTSQEIVH 240

Query: 241 GNVVSLPPRIRSPADSAYEALFNKWVAPPLQLEQQT--DDEEWLFGRTRKQDGPSIMTNK 300
            +  S   R    A   Y  L   W  PP +L + T  DDE WLFG    +  P      
Sbjct: 241 TDSGSKRHRKLKRAVKRYTDLIENW-TPPSRLSEHTEIDDEGWLFGSKHAEKQPE--KKV 300

Query: 301 AFSSVPSCGRSSSLWPRGQYLADADVYSLPYTIPF 328
             SS  SC  SS LWPR  +L DAD+Y+LPYT+PF
Sbjct: 301 RCSSDISCSSSSLLWPRACHLHDADIYALPYTVPF 319

BLAST of Cla022409 vs. TrEMBL
Match: E6NTZ5_JATCU (JHL20J20.12 protein OS=Jatropha curcas GN=JHL20J20.12 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.5e-38
Identity = 125/336 (37.20%), Postives = 181/336 (53.87%), Query Frame = 1

Query: 1   MSRCFPYPPPGYMRKVASTEAALIDSIKLQSERRQSKNDRKKEKSKHKKEKSKDKKERSK 60
           MSRCFPYPP GY+R  A  EA + +SIK+QSE  +++ +  K K K KKE+ K+KKER K
Sbjct: 1   MSRCFPYPPLGYLRNGARGEA-VSESIKIQSEWGKARTEHDKRK-KEKKERKKEKKERKK 60

Query: 61  DKKHKSKERKEKSSHSRDLNDQKQKECLNEAKDLLKGTKVEAEQLEGSGLTEEHGQPVWP 120
            +K    E KE +  +   N Q ++            +KV+ E+ E SGLTEEH QPV  
Sbjct: 61  SRK----ENKEDTYIADRCNQQDKR----------LPSKVQEEEAERSGLTEEHDQPVCS 120

Query: 121 QSPGYLSDGTQISHKRKRDAA---LRPNDGCKIIRIKLASSLSQQEDSSAGSEQTCSTSG 180
           QS  Y  D T+ S KRKRD     +  + G  IIRI+L     ++ D+S   E   S+S 
Sbjct: 121 QSLCYSPDSTRSSDKRKRDDLSYNITKSSG-NIIRIRLPLQKHREVDASTSGEHVRSSSR 180

Query: 181 RDISVDQKRDENSRGSNQQITIFTNAETAVDVNVPTSSKPMIVDPPLHPIKDISSKGGNV 240
           +   + QK+        Q  +I  N++T ++++ P      IV P  +   D  S    V
Sbjct: 181 KSDFLAQKQIITVPDKEQPSSI--NSKTGINISDP------IVTPCANLEADKDSVRKRV 240

Query: 241 VS---LPPRIR--SPADSAYEALFNKWVAPPLQLEQQT-DDEEWLFGRTRKQDGPSIMTN 300
           ++   +  R+R    A+S Y+ L   WV  PL  +Q    D+EWLFG T+KQ+    + +
Sbjct: 241 ITASGVSSRVRGVQNAESLYKDLLEDWVPLPLGCDQNNIGDQEWLFG-TKKQEKHKRLKS 300

Query: 301 KAFSSVPSCGRSSSLWPRGQYLADADVYSLPYTIPF 328
           +       C  SS+LWP  +YL +A+VY+LPYT+PF
Sbjct: 301 QCDE---PCHGSSTLWPCARYLPEAEVYALPYTVPF 307

BLAST of Cla022409 vs. TrEMBL
Match: A0A022RG69_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008728mg PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.5e-38
Identity = 140/378 (37.04%), Postives = 194/378 (51.32%), Query Frame = 1

Query: 1   MSRCFPYPPPGYMRKVASTEAALIDSIKLQSERRQSKNDRKKEKSKHKKEKSKDKKERSK 60
           MSRCFPYPPPGY       E ALI+SIK+Q ++ +S+ +RKK++ + KKEK K+KK++S 
Sbjct: 1   MSRCFPYPPPGYTLSGDGKE-ALIESIKIQKDKVKSE-ERKKDRKREKKEKKKEKKQKS- 60

Query: 61  DKKHKSKERKEKSSHSRDLN------DQKQKECLNEAKD---LLKGTKVEAEQLEGSGLT 120
              HK  E+    +H + LN      D+K +    + K    L K +K EA+QLE S LT
Sbjct: 61  --THKDNEK----NHEKSLNVAHGHIDKKSRAAAADVKGQSLLQKVSKAEADQLERSSLT 120

Query: 121 EEHGQPVWPQSPGYLSDGTQISHKRKR-----DAALRPNDGCKIIRIKLASSLSQQE--D 180
           EE G+PV    P   +D T+ S+KRKR     D A  P    KIIRIKL+S        D
Sbjct: 121 EERGKPV--VLPSTSADSTENSNKRKRQSSPLDCARAPG---KIIRIKLSSKNQNPSPID 180

Query: 181 SSAGSE---QTCSTSGRDISVDQKRDE-NSRGSNQQITIFT-NAETAVDVNVP-TSSKPM 240
           +S   +   QTCSTSGR       +DE   R   + ++  T  A+  V    P  SS   
Sbjct: 181 ASVNEQQQTQTCSTSGRPSFPSFNKDEVVFRQRTEDLSSCTLKAQIPVIGRDPICSSSQQ 240

Query: 241 IVDPPLH--PIKDISS--------KGGNVVSLP----PRIRSPADS---------AYEAL 300
           I   P+   P+  +++         G ++ S+P    P  ++PA            Y+ L
Sbjct: 241 IEHVPVQKMPVPSVTTPMQRSALVTGKDICSIPKPIEPVQKTPAPHLSRVQRNALRYKNL 300

Query: 301 FNKWVAPPLQ--LEQQTDDEEWLFGRTRKQDGPSIMTNKAFSSV---PSCGRSSSLW-PR 328
              W  P L+  L + TDD +WLF   + Q+G S       +SV    SC  SS +W PR
Sbjct: 301 TEMWAPPQLEFALPEDTDDVDWLFKGKKNQEGISSEKRCCSTSVNDAKSCSSSSIMWPPR 360

BLAST of Cla022409 vs. TrEMBL
Match: U5GKC3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s02070g PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.2e-36
Identity = 123/337 (36.50%), Postives = 168/337 (49.85%), Query Frame = 1

Query: 1   MSRCFPYPPPGYMRKVASTEAALIDSIKLQSERRQSKNDRKKEKSKHKKEKSKDKKERSK 60
           MSRCFPYPPPGY R         I+SIK+Q E+  S  +  +E  K KK +         
Sbjct: 1   MSRCFPYPPPGYYR---------IESIKIQKEKELSVTESYREAKKEKKGR--------- 60

Query: 61  DKKHKSKERKEKSSHSRDLNDQKQKECLNEAKDLLKGTKVEAEQLEGSGLTEEHGQPVWP 120
                 ++RKE S+ +     + Q+E     K  L   K + E+ E SGLTEEH +PV  
Sbjct: 61  ------RQRKENSNQTGYYGGKSQQE----GKGRLP--KEKREEAEKSGLTEEHNEPVCL 120

Query: 121 QSPGYLSD-GTQISHKRKRDAALRPNDGCK-IIRIKLASSLSQQEDSSAGSEQTCSTSGR 180
           Q+  YLSD G + + +RK D++   +D  + + RI+L  +  ++ D S  S+  CSTSG 
Sbjct: 121 QNVCYLSDDGIRSNKRRKLDSSTTTDDKPRNVFRIRLPLTRHKEPDVSLNSKGLCSTSGG 180

Query: 181 DISVDQKRDENSRGSNQQITIFTNAETAVDVNVPTSSKPMIVDPPLH-PIKDISSKGGNV 240
             SV             +I   ++ ET        S    +  PP + P   +S K  + 
Sbjct: 181 ADSVS---------GQSEIVRLSDQETV------NSKAGELASPPENIPCSSVSDKLESS 240

Query: 241 VS------LPPRIRSPADSAYEALFNKWVAPPLQLE-QQTDDEEWLFGRTRKQDGPSIMT 300
           VS         R    ADS Y+ L   WV PPLQ E + +DDEEWLFG T KQ+      
Sbjct: 241 VSETSWFRFHDRKTLKADSQYKGLVEDWVPPPLQFELKDSDDEEWLFG-TLKQERHGNKR 290

Query: 301 NKAFSSVPSCGRSSSLWPRGQYLADADVYSLPYTIPF 328
             A   + SC  SS+LWPR  YL ++DVY+LPYTIPF
Sbjct: 301 LNARHDI-SCRESSTLWPRAHYLPESDVYALPYTIPF 290

BLAST of Cla022409 vs. NCBI nr
Match: gi|659089111|ref|XP_008445332.1| (PREDICTED: DNA ligase 1-like [Cucumis melo])

HSP 1 Score: 473.8 bits (1218), Expect = 2.5e-130
Identity = 257/337 (76.26%), Postives = 273/337 (81.01%), Query Frame = 1

Query: 1   MSRCFPYPPPGYMRKVASTEAALIDSIKLQSERRQSKNDRKKEKSKHKKEKSKDKKERSK 60
           MSRCFPYPPPGY+RKVASTEAALI+SIKLQSER QSKNDRK EK +HKKEKSKDKKERSK
Sbjct: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSER-QSKNDRKNEKRRHKKEKSKDKKERSK 60

Query: 61  DKKHKSKERKE---KSSHSRDLNDQKQKECLNEAKDLLKGTKVEAEQLEGSGLTEEHGQP 120
           DKKHKSKERKE   KSSHSR LNDQK  +CL E KDLL GTKVEAEQLE SGLTEEHGQP
Sbjct: 61  DKKHKSKERKEHKEKSSHSRSLNDQKHNKCLKEVKDLLDGTKVEAEQLERSGLTEEHGQP 120

Query: 121 VWPQSPGYLSDGTQISHKRKRDAALRPNDGC---KIIRIKLAS--SLSQQEDSSAGSEQT 180
           VWPQSP YLSDGTQI HKRKR A  +P++GC   KIIRIKLAS  SLSQQEDS+AGSEQ 
Sbjct: 121 VWPQSPAYLSDGTQIDHKRKRQAETQPDEGCKPGKIIRIKLASAPSLSQQEDSAAGSEQM 180

Query: 181 CSTSGRDISVDQKRDENSRGSNQQITIFTNAETAVDVNVPTSSKPMIVDPPLHPIKDISS 240
           CSTSGR  S DQK D +S GS        NAETAV V+ PT S P I  PPLHPI D +S
Sbjct: 181 CSTSGRYNSFDQKTDGDSHGS------VANAETAVAVH-PTLSNPKIEHPPLHPIGDRNS 240

Query: 241 KGGNVVSLPPRIRSPADSAYEALFNKWVAPPLQLEQQTDDEEWLFGRTRKQDGPSIM--T 300
           K   VVS+P R RS A+SAYEALF +WVAPPL LEQQTDDEEWLFG TRKQDG S M   
Sbjct: 241 K-STVVSVPSRKRSSAESAYEALFEEWVAPPLLLEQQTDDEEWLFGTTRKQDGRSTMANN 300

Query: 301 NKAFSSVPSCGRSSSLWPRGQYLADADVYSLPYTIPF 328
           N AFS+V SCGRSS+LWPRGQYL DADVYSLPYTIPF
Sbjct: 301 NNAFSTVSSCGRSSNLWPRGQYLVDADVYSLPYTIPF 328

BLAST of Cla022409 vs. NCBI nr
Match: gi|449450500|ref|XP_004143000.1| (PREDICTED: uncharacterized protein LOC101215840 [Cucumis sativus])

HSP 1 Score: 444.5 bits (1142), Expect = 1.6e-121
Identity = 249/340 (73.24%), Postives = 268/340 (78.82%), Query Frame = 1

Query: 1   MSRCFPYPPPGYMRKVASTEAALIDSIKLQSERRQSKNDRKKEKSKHKKEK---SKDKKE 60
           MSRCFPYPPPGY+RKVASTEAALI+SIKLQSER QSKNDRK EK +HKKEK   SK+KKE
Sbjct: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSER-QSKNDRKNEKRRHKKEKKEKSKNKKE 60

Query: 61  RSKDKKHKSKERKE---KSSHSRDLNDQKQKECLNEAKDLLKGTKVEAEQLEGSGLTEEH 120
           RSKDKKHKSKERKE   KSS S+ LNDQK  +C  E KD L G+KVEAEQLE SGLTEEH
Sbjct: 61  RSKDKKHKSKERKEHKGKSSRSQGLNDQKHDKCFKEVKD-LDGSKVEAEQLERSGLTEEH 120

Query: 121 GQPVWPQSPGYLSDGTQISHKRKRDAALRPNDGC---KIIRIKL--ASSLSQQEDSSAGS 180
           GQPVWPQSP YLSDGTQI HKRKR+AA +P++GC   KIIRIKL  ASSLSQQEDSSAGS
Sbjct: 121 GQPVWPQSPAYLSDGTQIDHKRKREAATQPDEGCKPGKIIRIKLASASSLSQQEDSSAGS 180

Query: 181 EQTCSTSGRDISVDQKRDENSRGSNQQITIFTNAETAVDVNVPTSSKPMIVDPPLHPIKD 240
           EQ CSTSGR  SVDQK D +S GS        NAETAV V  PT S P     PLHPI+D
Sbjct: 181 EQMCSTSGRYNSVDQKTDGDSHGS------IANAETAVTV-FPTLSNP---KTPLHPIRD 240

Query: 241 ISSKGGNVVSLPPRIRSPADSAYEALFNKWVAPPLQLEQQTDDEEWLFGRTRKQDGPS-- 300
            S+    V S+P R RS A+SAYEALF KWVAPPL LEQQTDDEEWLFG TRKQDG S  
Sbjct: 241 -SNSTDKVASVPSRKRSSAESAYEALFEKWVAPPLLLEQQTDDEEWLFGTTRKQDGRSST 300

Query: 301 IMTNKAFSSVPSCGRSSSLWPRGQYLADADVYSLPYTIPF 328
           +  N A S+V SCGRSS+LWPRGQYL DADVYSLPYTIPF
Sbjct: 301 MANNNALSTVSSCGRSSNLWPRGQYLVDADVYSLPYTIPF 327

BLAST of Cla022409 vs. NCBI nr
Match: gi|661888929|emb|CDP07372.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 173.3 bits (438), Expect = 6.9e-40
Identity = 130/335 (38.81%), Postives = 167/335 (49.85%), Query Frame = 1

Query: 1   MSRCFPYPPPGYMRKVASTEAALIDSIKLQSERRQSKNDRKKEKSKHKKEKSKDKKERSK 60
           MSRCFPYPPPGY+   A  EA LI+SIKLQ E  ++K DRKKEK + KKEK K   E  K
Sbjct: 1   MSRCFPYPPPGYILSKAGNEA-LIESIKLQKEWEKTKADRKKEKKREKKEKKK--AEEQK 60

Query: 61  DKKHKSKERKEKSSHSRDLNDQKQKECLNEAKDLLKGTKVEAEQLEGSGLTEEHGQPVWP 120
            ++ K+ +    +       + K      E KD       ++EQLE S +TEEH QPV  
Sbjct: 61  ARQTKASQFDHDACGGESWENVKGGFLQKERKD-------DSEQLERSSITEEHEQPVCS 120

Query: 121 QSPGYLSDGTQISHKRKR-DAALRPND-GCKIIRIKLASSLSQQEDSSAGSEQTCSTSGR 180
           Q+P Y SD TQ S+KRKR D  L        I+RI+L S    Q DS    E  CSTSGR
Sbjct: 121 QNPSYSSDSTQNSNKRKRHDPPLNATRVQGNILRIRLPSQKHIQHDSKDRDELLCSTSGR 180

Query: 181 -DISVDQKRDENSRGSNQQITIFTNAETAVDVNVPTSSKPMIVDPPLHPIKDISSK---G 240
            DI  + K   ++R    +    +     +   +P  S   +         D++S+    
Sbjct: 181 TDIPAEHK---DARADPDKSCSTSLGSDLILHGLPLRSDQGLARGNSSQQPDVTSQEIVH 240

Query: 241 GNVVSLPPRIRSPADSAYEALFNKWVAPPLQLEQQT--DDEEWLFGRTRKQDGPSIMTNK 300
            +  S   R    A   Y  L   W  PP +L + T  DDE WLFG    +  P      
Sbjct: 241 TDSGSKRHRKLKRAVKRYTDLIENW-TPPSRLSEHTEIDDEGWLFGSKHAEKQPE--KKV 300

Query: 301 AFSSVPSCGRSSSLWPRGQYLADADVYSLPYTIPF 328
             SS  SC  SS LWPR  +L DAD+Y+LPYT+PF
Sbjct: 301 RCSSDISCSSSSLLWPRACHLHDADIYALPYTVPF 319

BLAST of Cla022409 vs. NCBI nr
Match: gi|697161369|ref|XP_009589462.1| (PREDICTED: uncharacterized protein LOC104086823 [Nicotiana tomentosiformis])

HSP 1 Score: 172.9 bits (437), Expect = 9.0e-40
Identity = 126/345 (36.52%), Postives = 177/345 (51.30%), Query Frame = 1

Query: 1   MSRCFPYPPPGYMRKVASTEAALIDSIKLQSERRQSKNDRKKEKSKHKKEKSKDKKERSK 60
           MSRCFPYPPPGY    A+   ALI+SIKLQ ER  +K + KKEK + KK+K   ++E  K
Sbjct: 1   MSRCFPYPPPGYSLNTAANNEALIESIKLQREREIAKAE-KKEKKREKKQKKGKRREEKK 60

Query: 61  DKKHKSKERKEKSSHSRDLNDQKQKECLNEAKDLLKGTKVEAEQLEGSGLTEEHGQPVWP 120
            KK  S    +K++H             ++   L K  + EAEQLE S LTEEHGQ V  
Sbjct: 61  AKKESSNPGFDKATHE------------SKGMYLFKCLEDEAEQLERSNLTEEHGQAVCS 120

Query: 121 QSPGYLSDGTQISHKRKRDAALRPNDG-----CKIIRIKLASSLSQQEDSSAGSEQTCST 180
           Q+    SD TQ S+KRKR A+  P+ G       IIRI+L+    Q E S+A  +Q    
Sbjct: 121 QNSSCSSDSTQNSNKRKRPAS--PSHGNIQAHGSIIRIRLSKKGGQGEMSTAKEKQLRKP 180

Query: 181 SGRDISVDQKRDENSRGSNQQITIFTNAETAVDVNVPTSSKPMIVDPPLHPIKDISSKGG 240
           + +D                ++T+ T AE A  +   T+++     P L  ++   S  G
Sbjct: 181 AQKD---------------AEVTVRTIAERANPLQKATNNQ---CCPSLSVLEPSPSTSG 240

Query: 241 --NVVSLPPRI--------RSPADSAYEALFNKWVAPPLQLEQ-QTDDEEWLFGRTRKQD 300
             + V++             +  +  Y+ L   W+ P LQ E    DDE WLF R  K  
Sbjct: 241 WTDCVAVDKTATALCSKEHENSIEFQYKNLIENWLPPSLQTEHLGVDDESWLFQRKPKHT 300

Query: 301 --GPSIMTNKAFSSVPSCGRSSSLWPRGQYLADADVYSLPYTIPF 328
             G   + +K  S+  +CG SS+LWPR QY+ DA++Y+LP+T+PF
Sbjct: 301 RVGEKSVVSKEVSNDSTCG-SSALWPRAQYIHDAELYALPFTVPF 311

BLAST of Cla022409 vs. NCBI nr
Match: gi|1012214114|ref|XP_015933957.1| (PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Arachis duranensis])

HSP 1 Score: 169.9 bits (429), Expect = 7.6e-39
Identity = 122/334 (36.53%), Postives = 174/334 (52.10%), Query Frame = 1

Query: 1   MSRCFPYPPPGYMRKVASTEAALIDSIKLQSERRQSKNDRKKEKSKHKKEKSKDKKERSK 60
           MSRCFP+ P GY    + +EA LI+SIK+Q E  + K D KKE+ + KKEK K+KKE+ K
Sbjct: 1   MSRCFPFRPTGYTSNGSCSEA-LIESIKIQREDAKVKKDLKKERRREKKEK-KEKKEKRK 60

Query: 61  DKKHKSKERKEKSSHSRDLNDQKQKECLNEAK-DLLKGTKV------EAEQLEGSGLTEE 120
           +++    ERK K+S+  D  DQK  E   E+  +  KG  V      E EQ   S +T E
Sbjct: 61  ERR----ERKGKTSNFSDAKDQKHIEAAGESTTERSKGVCVQKLDDSENEQQNKSDITVE 120

Query: 121 HGQPVWPQSPGYLSDGTQISHKRKRDAALRPNDGCKIIRIKLASSLSQQEDSSAGSEQTC 180
           H QPV    P   SD  Q  +KRKR  +    +G   I+++LA    +++      +Q  
Sbjct: 121 HDQPVSWLEP-CSSDSIQSGNKRKRSVSPSSQNGATGIKLRLALKKPEEQKQD---DQFG 180

Query: 181 STSGRDISVDQKRDENSRGSNQQITIFTNAETAVDVNVPTSSKPMIVDPPLHPIKDISSK 240
           STS   ++V     +N+  S+ Q+  FT+AE   D     S   +         K  SS 
Sbjct: 181 STSRSAVTV-YSSVQNANESHHQVRCFTSAER--DTCAGNSDFTL-------KGKFQSSH 240

Query: 241 GGNVVSLPPRIRSPADSAYEALFNKWVAPPLQLEQQTDDEEWLFGRTRKQDGPSIMTNKA 300
            G+     P+  +P  S Y+ALF  W+ PPL ++  + DE+WLFG   K         K 
Sbjct: 241 NGSA----PKSDTPVLSVYDALFQNWIPPPLTVDGLSSDEDWLFGSELKDGRSDTKRVKP 300

Query: 301 FSSVPSCGRSSSLWPRGQYLADADVYSLPYTIPF 328
            S    C  S+SLWPR QY+ + ++Y+LPYT+PF
Sbjct: 301 ISGAMRCS-STSLWPRAQYVPEVEIYALPYTVPF 309

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RPOC2_CRYJA6.5e-0647.69DNA-directed RNA polymerase subunit beta'' OS=Cryptomeria japonica GN=rpoC2 PE=3... [more]
TI214_OENBE8.5e-0639.02Protein TIC 214 (Fragment) OS=Oenothera berteroana GN=TIC214 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LK14_CUCSA1.1e-12173.24Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345960 PE=4 SV=1[more]
A0A068UGF8_COFCA4.8e-4038.81Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024613001 PE=4 SV=1[more]
E6NTZ5_JATCU4.5e-3837.20JHL20J20.12 protein OS=Jatropha curcas GN=JHL20J20.12 PE=4 SV=1[more]
A0A022RG69_ERYGU4.5e-3837.04Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008728mg PE=4 SV=1[more]
U5GKC3_POPTR3.2e-3636.50Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s02070g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659089111|ref|XP_008445332.1|2.5e-13076.26PREDICTED: DNA ligase 1-like [Cucumis melo][more]
gi|449450500|ref|XP_004143000.1|1.6e-12173.24PREDICTED: uncharacterized protein LOC101215840 [Cucumis sativus][more]
gi|661888929|emb|CDP07372.1|6.9e-4038.81unnamed protein product [Coffea canephora][more]
gi|697161369|ref|XP_009589462.1|9.0e-4036.52PREDICTED: uncharacterized protein LOC104086823 [Nicotiana tomentosiformis][more]
gi|1012214114|ref|XP_015933957.1|7.6e-3936.53PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Arachis duranensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU16981watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU46738watermelon EST collection version 2.0transcribed_cluster
WMU56888watermelon EST collection version 2.0transcribed_cluster
WMU68894watermelon EST collection version 2.0transcribed_cluster
WMU70794watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla022409Cla022409.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU70794WMU70794transcribed_cluster
WMU46738WMU46738transcribed_cluster
WMU68894WMU68894transcribed_cluster
WMU56888WMU56888transcribed_cluster
WMU16981WMU16981transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 88..108
score: -coord: 42..69
scor
NoneNo IPR availablePANTHERPTHR34660FAMILY NOT NAMEDcoord: 2..196
score: 4.0
NoneNo IPR availablePANTHERPTHR34660:SF1SUBFAMILY NOT NAMEDcoord: 2..196
score: 4.0

The following gene(s) are paralogous to this gene:

None