CmaCh12G002470 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G002470
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related
Location	Cma_Chr12 : 1240754 .. 1242439 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTGTTGCTTCTACTTCATCCGCACCGGACCACCCCCGTCCTCGCCTTCCTTGGTTCGAGCCCTCCCAAGCTATGACTGACCGGATTGTTCGAGCTCTCCACCATCACCTCCGTCTCCACACCGCTCTGATTCTTCATTCTGTGTTGGGTGCCACAGGCAATGTCTACATTGTGTCTCTATCCTCTACACCCCCTCGTGCACTTGCCCCAATCGTATTACGCCTTGCAAACACATGTTATTTGTTTACATTCGAGCTCTGGGTGTGTCACTGGATGATATATGTCTTTGGCAGAGAACGCTTCGACCTTGTCAATTGAATCGTTTGCTTACTGCACCTGCTATGACGGAATCGCTTGCTGAAATTCGTCTACGTAGAGTATTTCATCAGCAATTCTTTCAGGTAAAAGAAAGGACTTGTGTACTTATTGTAGATATTGAAGATGGGGCTGCTTGTCCTGTTTGTTTGGATGATCTAAAGGACGATCGGGTTGTGGCTTGTACGACATGTCGAAATCTCGTTCATGAAGATTGTTTCTCGAGGTGGAAACGAAGCAAGGGAAGGAGAAATATTAGCTGCGTAGTTTGTAGGGCAAGATGGAAGGACACGAACAAATGAACAAAAGTATTTGAATTTTTCTGCCCATCTCAATGAGCACGACGCAATTGACAACAATCGCTATAATAGCTAAATAGACACCATAAGATGTCTCGTAATAAAACTATTGACGAGTGTTCAATTAATACTCTTAAAAGTTAAAAAATACAATTAGCATTATTTGTTAAAAAAAATACTGAAAAACTTTCAAAAATATTTTAAAAATATCCTTAAAACTTTAATAATTTTCATTTACTTTTTTTTAATCTTTTAAAAAAATTAAAATAATTGTGTTTGCTATTAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATCTTAAAATTTTTAATAATGTTTGAAAAATACTTGTAGTATTAACATGTTTAATATCTATAAAAAAAAAAATTAAATAATTTCTTCAAATTTATCAATTAAATTTTTGAAAATTTAAAGGTATTTTTTAAATATATTTTTCAAATCTATTAATTTTTTCATCCATATTTTAGGAATATATTAAAAAATAAAAATCGATATTTTCCCAAAAGATTGAATAGTAAGCGATAGCCTTGTTTCTGGACAAATCCTCGCCCTTTTCTTCTTCAATCAATTTGTGGAGTTCAATAATTAATTGAATGAAGATTCAATGGAGTTGCAGAAGTGAATTTGAGCTATAGTAATCAGTATTTTCGATCTTAGCCAAAGGAGCAGCAGCTTTCATCAATCTCACACTAACAAATTTGATCCGTTGCGCACTCCCAAGTCTGAATTCTTACTGTTACCCTGCTTTCGTTGCCTAAGTTTTGTGCTAGGA

mRNA sequence

ATGGAGTCTGTTGCTTCTACTTCATCCGCACCGGACCACCCCCGTCCTCGCCTTCCTTGGTTCGAGCCCTCCCAAGCTATGACTGACCGGATTGTTCGAGCTCTCCACCATCACCTCCGTCTCCACACCGCTCTGATTCTTCATTCTGTGTTGGGTGCCACAGGCAATGTCTACATTGTGTCTCTATCCTCTACACCCCCTCGTGCACTTGCCCCAATCAGAACGCTTCGACCTTGTCAATTGAATCGTTTGCTTACTGCACCTGCTATGACGGAATCGCTTGCTGAAATTCGTCTACGTAGAGTATTTCATCAGCAATTCTTTCAGGTAAAAGAAAGGACTTGTGTACTTATTGTAGATATTGAAGATGGGGCTGCTTGTCCTGTTTGTTTGGATGATCTAAAGGACGATCGGGTTGTGGCTTGTACGACATGTCGAAATCTCGTTCATGAAGATTGTTTCTCGAGGTGGAAACGAAGCAAGGGAAGGAGAAATATTAGCTGCGTAGTTTGA

Coding sequence (CDS)

ATGGAGTCTGTTGCTTCTACTTCATCCGCACCGGACCACCCCCGTCCTCGCCTTCCTTGGTTCGAGCCCTCCCAAGCTATGACTGACCGGATTGTTCGAGCTCTCCACCATCACCTCCGTCTCCACACCGCTCTGATTCTTCATTCTGTGTTGGGTGCCACAGGCAATGTCTACATTGTGTCTCTATCCTCTACACCCCCTCGTGCACTTGCCCCAATCAGAACGCTTCGACCTTGTCAATTGAATCGTTTGCTTACTGCACCTGCTATGACGGAATCGCTTGCTGAAATTCGTCTACGTAGAGTATTTCATCAGCAATTCTTTCAGGTAAAAGAAAGGACTTGTGTACTTATTGTAGATATTGAAGATGGGGCTGCTTGTCCTGTTTGTTTGGATGATCTAAAGGACGATCGGGTTGTGGCTTGTACGACATGTCGAAATCTCGTTCATGAAGATTGTTTCTCGAGGTGGAAACGAAGCAAGGGAAGGAGAAATATTAGCTGCGTAGTTTGA

Protein sequence

MESVASTSSAPDHPRPRLPWFEPSQAMTDRIVRALHHHLRLHTALILHSVLGATGNVYIVSLSSTPPRALAPIRTLRPCQLNRLLTAPAMTESLAEIRLRRVFHQQFFQVKERTCVLIVDIEDGAACPVCLDDLKDDRVVACTTCRNLVHEDCFSRWKRSKGRRNISCVV

Homology

[Close]

BLAST of CmaCh12G002470 vs. TrEMBL
Match: A0A0A0LS10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373540 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.2e-52
Identity = 125/205 (60.98%), Postives = 140/205 (68.29%), Query Frame = 1


Query: 1   MESVASTSSAPDHPRPRLPWFEPSQAMTDRIVRALHHHLR-LHTALILHSVLGATGNVYI 60
           MESVASTSS    PR     F+PSQ + DRIVRALHHHLR LH +     VLGATGNVYI
Sbjct: 1   MESVASTSSPHSVPR-----FKPSQPVADRIVRALHHHLRLLHRSGSNFFVLGATGNVYI 60

Query: 61  VSLSSTP----PRALAPI----------------------RTLRPCQLNRLLTAPAMTES 120
           VSLSSTP    P  + P                       RTLRPCQLNRLL AP M +S
Sbjct: 61  VSLSSTPSCTCPDRITPCKHILFIYLQALGLSLDDVCLRRRTLRPCQLNRLLAAPIMLKS 120

Query: 121 LAEIRLRRVFHQQFFQVKER-------TCVLIVDIEDGAACPVCLDDL-KDDRVVACTTC 171
           LAEI LR+VFHQQFFQV +R       + V + D+EDG+ACPVCLDD+ K DRVVAC+TC
Sbjct: 121 LAEIGLRKVFHQQFFQVNDRAASSSSSSSVTVEDMEDGSACPVCLDDMKKKDRVVACSTC 180

[Close]

BLAST of CmaCh12G002470 vs. TrEMBL
Match: M5XFQ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010509mg PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.1e-35
Identity = 94/205 (45.85%), Postives = 122/205 (59.51%), Query Frame = 1


Query: 1   MESVASTSSAPDHPRPRLPW--FEPSQAMTDRIVRALHHHLR-LHTALILHSVLGATGNV 60
           MESVAS+SS P+H  P+ P   F+ +Q   DRIVRALHH LR LH       +LGATGNV
Sbjct: 1   MESVASSSSPPNHHHPQRPRTRFKRTQPFADRIVRALHHDLRLLHRRESTFFILGATGNV 60

Query: 61  YIVSLSSTP----PRALAPI----------------------RTLRPCQLNRLLTAPAMT 120
           Y V+L +TP    P    P                       RTLRPCQ++RLL  P + 
Sbjct: 61  YTVALCATPSCTCPDRTTPCKHILFVFLRVLGLPLDDTCLRRRTLRPCQVSRLLGLPTLP 120

Query: 121 ESLAEIRLRRVFHQQFFQ-----VKERTCVLIVDIEDGAACPVCLDDL-KDDRVVACTTC 171
           ESLA + +R+ FHQ FF         RT    V+IE+G +CPVCL+++ +++RVVAC TC
Sbjct: 121 ESLAGVSVRQRFHQLFFNQGSSASSSRTRPKDVEIEEGRSCPVCLEEMGREERVVACGTC 180

[Close]

BLAST of CmaCh12G002470 vs. TrEMBL
Match: A0A059CL04_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00599 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 9.2e-35
Identity = 99/211 (46.92%), Postives = 119/211 (56.40%), Query Frame = 1


Query: 1   MESVASTSSAPDHPRPRL--------PWFEPSQAMTDRIVRALHHHLRL-HTALILHSVL 60
           MESVAS S+ P   R R           FEPSQ   DRIVRA+ HHL L H +     VL
Sbjct: 1   MESVASNSTPPPPGRRRQGSNHHLSRELFEPSQPTVDRIVRAISHHLLLLHRSDSSFFVL 60

Query: 61  GATGNVYIVSLSSTP----PRALAPI----------------------RTLRPCQLNRLL 120
           GATGNVY VSLSS+P    P    P                       RTLRPCQL RLL
Sbjct: 61  GATGNVYTVSLSSSPACTCPDRATPCKHILFVLIRVLGVALDDSCLQRRTLRPCQLQRLL 120

Query: 121 TAPAMTESLAEIRLRRVFHQQFFQVKERTCVLI---VDIEDGAACPVCLDDLKD---DRV 171
             P   +++A   LR  FH+ FF+ + R    +   V IEDGAACP+C+D++K+   +RV
Sbjct: 121 ATPTSPDAMAGPSLRERFHRDFFRARARPDGGLPEGVRIEDGAACPICMDEMKERGAERV 180

[Close]

BLAST of CmaCh12G002470 vs. TrEMBL
Match: K4CLN1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.9e-34
Identity = 87/200 (43.50%), Postives = 118/200 (59.00%), Query Frame = 1


Query: 1   MESVASTSSAPD--HPRPRLPWFEPSQAMTDRIVRALHHHLR-LHTALILHSVLGATGNV 60
           MES+ S+S+A +  H  P      P+Q + DRI+RA+ HHLR LH       +LGATGNV
Sbjct: 1   MESIGSSSTASNNHHHHPHRRHLMPTQPLADRIIRAVSHHLRLLHHYDTTFFILGATGNV 60

Query: 61  YIVSLSSTP----PRALAPI----------------------RTLRPCQLNRLLTAPAMT 120
           Y V+LS+TP    P   AP                       RTLRPC+L RLL+ P  T
Sbjct: 61  YTVNLSTTPSCSCPDRTAPCKHILFVFIRVLGVSVDDMCLLRRTLRPCELQRLLSLPIST 120

Query: 121 ESLAEIRLRRVFHQQFFQVKERTCVLIVDIEDGAACPVCLDDL-KDDRVVACTTCRNLVH 171
           ESLA   +R  FHQ FFQ + ++ VL ++IE G  CP+CL+++ K++RV  C TC+N +H
Sbjct: 121 ESLANPNVRERFHQLFFQERSKSSVLKIEIEKGVTCPICLEEMNKEERVGICGTCKNPLH 180

[Close]

BLAST of CmaCh12G002470 vs. TrEMBL
Match: A0A067KDF7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07728 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-33
Identity = 90/203 (44.33%), Postives = 120/203 (59.11%), Query Frame = 1


Query: 1   MESVASTSSAPDHPRPRLPW-FEPSQAMTDRIVRALHHHLRL-HTALILHSVLGATGNVY 60
           MESV S+SS  DH   RL +   P+Q +  RI RAL HHLRL H +     +LGATGNVY
Sbjct: 1   MESVGSSSSTSDH---RLHFHIRPTQPLAGRIFRALRHHLRLLHRSESNFFILGATGNVY 60

Query: 61  IVSLSSTP----PRALAPI----------------------RTLRPCQLNRLLTAPAMTE 120
            V+L++TP    P    P                       RTLRPC+LNRLL+ P   +
Sbjct: 61  TVTLANTPSCTCPDRTTPCKHIFFVLIRVLGVSVDDTCLRRRTLRPCRLNRLLSTPTSPD 120

Query: 121 SLAEIRLRRVFHQQFFQVKERTCVL----IVDIEDGAACPVCLDDL-KDDRVVACTTCRN 171
           SLA + +R+ FHQ FF+ + +         ++IE+G ACP+CLD++ K DRVVAC TC+N
Sbjct: 121 SLASLTVRQWFHQLFFEARRQNGASRGDEKLEIEEGTACPICLDEMEKGDRVVACGTCKN 180

[Close]

BLAST of CmaCh12G002470 vs. TAIR10
Match: AT5G11620.1 (AT5G11620.1 SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related)

HSP 1 Score: 58.9 bits (141), Expect = 3.5e-09
Identity = 39/123 (31.71%), Postives = 56/123 (45.53%), Query Frame = 1


Query: 74  RTLRPCQLNRLLTAPAMTESLAEIR----LRRVFHQQFFQV------KERTCVLIVDI-E 133
           R LR C L  L +AP   + LA  R      ++F     Q          T  +  ++ E
Sbjct: 101 RRLRTCLLFHLFSAPTRPDCLASFRLQQRFLQLFPATTSQPGYTTNSSSSTSKMENEVDE 160

Query: 134 DGAACPVCLDDL---------------KDDRVVACTTCRNLVHEDCFSRWKRSKGRRNIS 171
           + A CP+CLDD+               K+  VV C  C+N VH++C   W++S+GRR   
Sbjct: 161 EPATCPICLDDIIAIENVDGGNGGGKEKETAVVKCRVCKNKVHDECMLAWRKSRGRRPAI 220

[Close]

BLAST of CmaCh12G002470 vs. NCBI nr
Match: gi|659088489|ref|XP_008445008.1| (PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Cucumis melo])

HSP 1 Score: 221.1 bits (562), Expect = 1.5e-54
Identity = 128/204 (62.75%), Postives = 144/204 (70.59%), Query Frame = 1


Query: 1   MESVASTSSAPDHPRPRLPWFEPSQAMTDRIVRALHHHLR-LHTALILHSVLGATGNVYI 60
           MESVASTSS    PRP +P F+PSQ + DRIVRALHHHLR LH +     VLGATGNVYI
Sbjct: 1   MESVASTSS----PRP-VPRFKPSQPVADRIVRALHHHLRLLHRSGSNFFVLGATGNVYI 60

Query: 61  VSLSSTP----PRALAPI----------------------RTLRPCQLNRLLTAPAMTES 120
           VSLSSTP    P  + P                       RTLRPCQLNRLL AP M +S
Sbjct: 61  VSLSSTPSCTCPDRITPCKHILFIYLQALGLSLDDVCLRRRTLRPCQLNRLLAAPIMLKS 120

Query: 121 LAEIRLRRVFHQQFFQVKER------TCVLIVDIEDGAACPVCLDDL-KDDRVVACTTCR 171
           LAEI LR+VFHQQFFQV +R      +CV + D+EDG ACPVCLDD+ K+DRVVAC+TCR
Sbjct: 121 LAEIGLRKVFHQQFFQVNDRACSSSSSCVTVEDMEDGTACPVCLDDMKKNDRVVACSTCR 180

[Close]

BLAST of CmaCh12G002470 vs. NCBI nr
Match: gi|449461325|ref|XP_004148392.1| (PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 3.1e-52
Identity = 125/205 (60.98%), Postives = 140/205 (68.29%), Query Frame = 1


Query: 1   MESVASTSSAPDHPRPRLPWFEPSQAMTDRIVRALHHHLR-LHTALILHSVLGATGNVYI 60
           MESVASTSS    PR     F+PSQ + DRIVRALHHHLR LH +     VLGATGNVYI
Sbjct: 1   MESVASTSSPHSVPR-----FKPSQPVADRIVRALHHHLRLLHRSGSNFFVLGATGNVYI 60

Query: 61  VSLSSTP----PRALAPI----------------------RTLRPCQLNRLLTAPAMTES 120
           VSLSSTP    P  + P                       RTLRPCQLNRLL AP M +S
Sbjct: 61  VSLSSTPSCTCPDRITPCKHILFIYLQALGLSLDDVCLRRRTLRPCQLNRLLAAPIMLKS 120

Query: 121 LAEIRLRRVFHQQFFQVKER-------TCVLIVDIEDGAACPVCLDDL-KDDRVVACTTC 171
           LAEI LR+VFHQQFFQV +R       + V + D+EDG+ACPVCLDD+ K DRVVAC+TC
Sbjct: 121 LAEIGLRKVFHQQFFQVNDRAASSSSSSSVTVEDMEDGSACPVCLDDMKKKDRVVACSTC 180

[Close]

BLAST of CmaCh12G002470 vs. NCBI nr
Match: gi|645226531|ref|XP_008220083.1| (PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Prunus mume])

HSP 1 Score: 160.6 bits (405), Expect = 2.4e-36
Identity = 95/205 (46.34%), Postives = 124/205 (60.49%), Query Frame = 1


Query: 1   MESVASTSSAPDHPRPRLPW--FEPSQAMTDRIVRALHHHLR-LHTALILHSVLGATGNV 60
           MESVAS+SS P+H  P+ P   F+P+Q   DRIVRALHH LR LH +     +LGATGNV
Sbjct: 1   MESVASSSSPPNHHHPQRPRTRFKPTQPFADRIVRALHHDLRILHRSESTFFILGATGNV 60

Query: 61  YIVSLSSTP----PRALAPI----------------------RTLRPCQLNRLLTAPAMT 120
           Y V+L +TP    P    P                       RTLRPCQ++RLL  P + 
Sbjct: 61  YTVALCATPSCTCPDRTTPCKHILFVFLRVLGLPLDDTCLRRRTLRPCQVSRLLGLPTLP 120

Query: 121 ESLAEIRLRRVFHQQFFQ-----VKERTCVLIVDIEDGAACPVCLDDL-KDDRVVACTTC 171
           ESLA + +R+ FHQ FF         RT    V+IE+G +CPVCL+++ +++RVVAC TC
Sbjct: 121 ESLAGVSVRQRFHQLFFNQGSSASSSRTRPRDVEIEEGRSCPVCLEEMGREERVVACGTC 180

[Close]

BLAST of CmaCh12G002470 vs. NCBI nr
Match: gi|657972589|ref|XP_008378081.1| (PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Malus domestica])

HSP 1 Score: 159.1 bits (401), Expect = 7.0e-36
Identity = 99/204 (48.53%), Postives = 123/204 (60.29%), Query Frame = 1


Query: 1   MESVASTSSAPDH-PRPRLPWFEPSQAMTDRIVRALHHHLR-LHTALILHSVLGATGNVY 60
           M+SVASTSS P+H PR     F+P+Q   DRI+RALHH LR LH       VLGATGNVY
Sbjct: 1   MDSVASTSSPPNHHPRRPRTRFKPTQPFADRILRALHHQLRLLHRRDSNFFVLGATGNVY 60

Query: 61  IVSLSSTPP------------------RALA-PI-------RTLRPCQLNRLLTAPAMTE 120
            VSLS+TP                   RAL  P+       RTLRPCQ+NRLL  P + E
Sbjct: 61  TVSLSATPSCTCPDRTTPCKHIFFVFIRALGLPLDDACLRRRTLRPCQVNRLLGLPTLPE 120

Query: 121 SLAEIRLRRVFHQQFFQVKERTCVL----IVDIEDGAACPVCLDDL--KDDRVVACTTCR 171
           +LA   LR  FHQ FFQ    +        V+IE+G++CPVCL+++  K ++VVAC TCR
Sbjct: 121 ALAAFSLRERFHQLFFQGSSSSSATKPRHQVEIEEGSSCPVCLEEMAGKQEKVVACGTCR 180

[Close]

BLAST of CmaCh12G002470 vs. NCBI nr
Match: gi|697133818|ref|XP_009620954.1| (PREDICTED: uncharacterized protein LOC104112668 [Nicotiana tomentosiformis])

HSP 1 Score: 158.7 bits (400), Expect = 9.1e-36
Identity = 95/200 (47.50%), Postives = 121/200 (60.50%), Query Frame = 1


Query: 1   MESVASTSSAPDHP--RPRLPWFEPSQAMTDRIVRALHHHLRL-HTALILHSVLGATGNV 60
           MESVAS+S+  DH   R RL    P+Q + DRI+RA+ HHLRL H A     +LGATGNV
Sbjct: 1   MESVASSSTPSDHHHHRHRLRLM-PTQPLADRIIRAVSHHLRLLHHADTTFFILGATGNV 60

Query: 61  YIVSLSSTP----PRALAPI----------------------RTLRPCQLNRLLTAPAMT 120
           Y V+LS+TP    P    P                       RTLRPC+L RLL+ P  T
Sbjct: 61  YTVNLSTTPSCSCPDRTTPCKHILFVLIRVLGVSIDDTCLLRRTLRPCELQRLLSLPIST 120

Query: 121 ESLAEIRLRRVFHQQFFQVKERTCVLIVDIEDGAACPVCLDDL-KDDRVVACTTCRNLVH 171
           ESLA   +R  FHQ FF+ + +   L ++IEDG  CPVCL+++ K +RV AC TCRN +H
Sbjct: 121 ESLANPNVRERFHQTFFKERPKCSPLRIEIEDGVTCPVCLEEMNKGERVAACGTCRNPLH 180

The following BLAST results are available for this feature:

BLAST of CmaCh12G002470 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh12G002470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS10_CUCSA	2.2e-52	60.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373540 PE=4 SV=1	[more]
M5XFQ1_PRUPE	3.1e-35	45.85	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010509mg PE=4 SV=1	[more]
A0A059CL04_EUCGR	9.2e-35	46.92	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00599 PE=4 SV=1	[more]
K4CLN1_SOLLC	5.9e-34	43.50	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A067KDF7_JATCU	1.7e-33	44.33	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07728 PE=4 SV=1	[more]

BLAST of CmaCh12G002470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11620.1	3.5e-09	31.71	SWIM zinc finger family protein / mitogen-activated protein kinase k...	[more]

BLAST of CmaCh12G002470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088489\|ref\|XP_008445008.1\|	1.5e-54	62.75	PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Cucumis melo]	[more]
gi\|449461325\|ref\|XP_004148392.1\|	3.1e-52	60.98	PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Cucumis sativus]	[more]
gi\|645226531\|ref\|XP_008220083.1\|	2.4e-36	46.34	PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Prunus mume]	[more]
gi\|657972589\|ref\|XP_008378081.1\|	7.0e-36	48.53	PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Malus domestica]	[more]
gi\|697133818\|ref\|XP_009620954.1\|	9.1e-36	47.50	PREDICTED: uncharacterized protein LOC104112668 [Nicotiana tomentosiformis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G002470.1	CmaCh12G002470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 126..168 score: 7.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 127..168 score: 8
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 120..169 score: 5.
None	No IPR available	PANTHER	PTHR21540	RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2	coord: 1..165 score: 5.4
None	No IPR available	PANTHER	PTHR21540:SF1	PHD FAMILY PROTEIN	coord: 1..165 score: 5.4
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 119..163 score: 8.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh12G002470	Cucsa.161250	Cucumber (Gy14) v1	cgycmaB0447
CmaCh12G002470	Cla022206	Watermelon (97103) v1	cmawmB148
CmaCh12G002470	Csa2G373540	Cucumber (Chinese Long) v2	cmacuB164
CmaCh12G002470	MELO3C011137	Melon (DHL92) v3.5.1	cmameB162
CmaCh12G002470	CSPI02G22200	Wild cucumber (PI 183967)	cmacpiB165
CmaCh12G002470	CmoCh05G006140	Cucurbita moschata (Rifu)	cmacmoB194
CmaCh12G002470	Lsi08G010800	Bottle gourd (USVL1VR-Ls)	cmalsiB184
CmaCh12G002470	Cp4.1LG07g02450	Cucurbita pepo (Zucchini)	cmacpeB203
CmaCh12G002470	Cp4.1LG11g05090	Cucurbita pepo (Zucchini)	cmacpeB174
CmaCh12G002470	MELO3C011137.2	Melon (DHL92) v3.6.1	cmamedB177
CmaCh12G002470	Cla97C08G155360	Watermelon (97103) v2	cmawmbB194
CmaCh12G002470	Bhi04G000703	Wax gourd	cmawgoB0210
CmaCh12G002470	Carg08276	Silver-seed gourd	carcmaB0074
CmaCh12G002470	Carg03838	Silver-seed gourd	carcmaB1349

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh12G002470	CmaCh05G005890	Cucurbita maxima (Rimu)	cmacmaB194

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh12G002470	Bottle gourd (USVL1VR-Ls)	cmalsiB169
CmaCh12G002470	Cucumber (Gy14) v2	cgybcmaB168
CmaCh12G002470	Cucumber (Gy14) v2	cgybcmaB301
CmaCh12G002470	Melon (DHL92) v3.6.1	cmamedB185
CmaCh12G002470	Silver-seed gourd	carcmaB0892
CmaCh12G002470	Cucumber (Chinese Long) v3	cmacucB0192
CmaCh12G002470	Cucumber (Chinese Long) v3	cmacucB0210
CmaCh12G002470	Watermelon (97103) v2	cmawmbB166
CmaCh12G002470	Wax gourd	cmawgoB0223
CmaCh12G002470	Cucurbita maxima (Rimu)	cmacmaB035
CmaCh12G002470	Cucumber (Gy14) v1	cgycmaB0856
CmaCh12G002470	Cucurbita moschata (Rifu)	cmacmoB176
CmaCh12G002470	Wild cucumber (PI 183967)	cmacpiB182
CmaCh12G002470	Cucumber (Chinese Long) v2	cmacuB180
CmaCh12G002470	Melon (DHL92) v3.5.1	cmameB170
CmaCh12G002470	Watermelon (Charleston Gray)	cmawcgB143
CmaCh12G002470	Watermelon (Charleston Gray)	cmawcgB169
CmaCh12G002470	Watermelon (97103) v1	cmawmB174