CmaCh05G005890 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCCGTTGCCTCTACTTCGTCGTCCCCACCGGACGGTCCCCGTCTTCACCTTCATCGGTTCAAGCCCTCCCAAGCTGTGGCTGACCGGATTATTCGAGCTCTCCACCATCACCTCCACCTCCTTTACCGCTCCAATTCTAACTTCTTTGTGTTGGGAGCCACAGGCAATGTTTACATCGTGACTCTATCCTCCACCCCCTCGTGTACTTGTCCCGATCGTATTACCCCATGCAAACACATACTATTTATCTACATTCGAGCCTTGGGCTTGTCGCTTGACGACGTATGTCTTCGGAGGAGAACACTTCGACCTTGCCAGTTGAATCGTTTGCTTGCTGCACCTATAATGTTAGAATCACTTGCAGAGATTGGCATACGTAGAATATTTCATCAACAATTCTTTCAGGTAAAAGAAAGAGGTTCTTCTGCAAATGTTGTGGAAGAAGGGACTGCATGTCCTGTTTGTTTGGATGATATGAAGAAGAACGACCGTGTTGTAGCTTGTTCGACGTGTCGAAATCTTGTTCATGAAGATTGTTTCTCAAGGTGGAAACGAAGCAAGGGAAGGAGAAGTGTTAGTTGCGTAGTGTGTAGGGCACGGTGGAAAGAGACGACAGATCAACAAAAGTATTTGAATTTGTCTGCCTATGTCAACGAACACGACGTAGTTGACAACAATCTCTAG ATGGAGTCCGTTGCCTCTACTTCGTCGTCCCCACCGGACGGTCCCCGTCTTCACCTTCATCGGTTCAAGCCCTCCCAAGCTGTGGCTGACCGGATTATTCGAGCTCTCCACCATCACCTCCACCTCCTTTACCGCTCCAATTCTAACTTCTTTGTGTTGGGAGCCACAGGCAATGTTTACATCGTGACTCTATCCTCCACCCCCTCGTGTACTTGTCCCGATCGTATTACCCCATGCAAACACATACTATTTATCTACATTCGAGCCTTGGGCTTGTCGCTTGACGACGTATGTCTTCGGAGGAGAACACTTCGACCTTGCCAGTTGAATCGTTTGCTTGCTGCACCTATAATGTTAGAATCACTTGCAGAGATTGGCATACGTAGAATATTTCATCAACAATTCTTTCAGGTAAAAGAAAGAGGTTCTTCTGCAAATGTTGTGGAAGAAGGGACTGCATGTCCTGTTTGTTTGGATGATATGAAGAAGAACGACCGTGTTGTAGCTTGTTCGACGTGTCGAAATCTTGTTCATGAAGATTGTTTCTCAAGGTGGAAACGAAGCAAGGGAAGGAGAAGTGTTAGTTGCGTAGTGTGTAGGGCACGGTGGAAAGAGACGACAGATCAACAAAAGTATTTGAATTTGTCTGCCTATGTCAACGAACACGACGTAGTTGACAACAATCTCTAG ATGGAGTCCGTTGCCTCTACTTCGTCGTCCCCACCGGACGGTCCCCGTCTTCACCTTCATCGGTTCAAGCCCTCCCAAGCTGTGGCTGACCGGATTATTCGAGCTCTCCACCATCACCTCCACCTCCTTTACCGCTCCAATTCTAACTTCTTTGTGTTGGGAGCCACAGGCAATGTTTACATCGTGACTCTATCCTCCACCCCCTCGTGTACTTGTCCCGATCGTATTACCCCATGCAAACACATACTATTTATCTACATTCGAGCCTTGGGCTTGTCGCTTGACGACGTATGTCTTCGGAGGAGAACACTTCGACCTTGCCAGTTGAATCGTTTGCTTGCTGCACCTATAATGTTAGAATCACTTGCAGAGATTGGCATACGTAGAATATTTCATCAACAATTCTTTCAGGTAAAAGAAAGAGGTTCTTCTGCAAATGTTGTGGAAGAAGGGACTGCATGTCCTGTTTGTTTGGATGATATGAAGAAGAACGACCGTGTTGTAGCTTGTTCGACGTGTCGAAATCTTGTTCATGAAGATTGTTTCTCAAGGTGGAAACGAAGCAAGGGAAGGAGAAGTGTTAGTTGCGTAGTGTGTAGGGCACGGTGGAAAGAGACGACAGATCAACAAAAGTATTTGAATTTGTCTGCCTATGTCAACGAACACGACGTAGTTGACAACAATCTCTAG MESVASTSSSPPDGPRLHLHRFKPSQAVADRIIRALHHHLHLLYRSNSNFFVLGATGNVYIVTLSSTPSCTCPDRITPCKHILFIYIRALGLSLDDVCLRRRTLRPCQLNRLLAAPIMLESLAEIGIRRIFHQQFFQVKERGSSANVVEEGTACPVCLDDMKKNDRVVACSTCRNLVHEDCFSRWKRSKGRRSVSCVVCRARWKETTDQQKYLNLSAYVNEHDVVDNNL
BLAST of CmaCh05G005890 vs. TrEMBL
Match: A0A0A0LS10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373540 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 4.9e-100 Identity = 188/239 (78.66%), Postives = 209/239 (87.45%), Query Frame = 1
BLAST of CmaCh05G005890 vs. TrEMBL
Match: A0A0D2V7W4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G106200 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 2.4e-78 Identity = 149/233 (63.95%), Postives = 182/233 (78.11%), Query Frame = 1
BLAST of CmaCh05G005890 vs. TrEMBL
Match: A0A061GJR6_THECC (SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase-related, putative OS=Theobroma cacao GN=TCM_037201 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 4.0e-78 Identity = 146/230 (63.48%), Postives = 184/230 (80.00%), Query Frame = 1
BLAST of CmaCh05G005890 vs. TrEMBL
Match: F6H3D1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03300 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 3.4e-77 Identity = 143/226 (63.27%), Postives = 174/226 (76.99%), Query Frame = 1
BLAST of CmaCh05G005890 vs. TrEMBL
Match: A0A0L9TEP4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan561s000900 PE=4 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 7.6e-77 Identity = 142/228 (62.28%), Postives = 173/228 (75.88%), Query Frame = 1
BLAST of CmaCh05G005890 vs. TAIR10
Match: AT5G11620.1 (AT5G11620.1 SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related) HSP 1 Score: 189.1 bits (479), Expect = 3.0e-48 Identity = 114/262 (43.51%), Postives = 142/262 (54.20%), Query Frame = 1
BLAST of CmaCh05G005890 vs. NCBI nr
Match: gi|659088489|ref|XP_008445008.1| (PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Cucumis melo]) HSP 1 Score: 388.7 bits (997), Expect = 7.3e-105 Identity = 189/236 (80.08%), Postives = 211/236 (89.41%), Query Frame = 1
BLAST of CmaCh05G005890 vs. NCBI nr
Match: gi|449461325|ref|XP_004148392.1| (PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Cucumis sativus]) HSP 1 Score: 372.1 bits (954), Expect = 7.0e-100 Identity = 188/239 (78.66%), Postives = 209/239 (87.45%), Query Frame = 1
BLAST of CmaCh05G005890 vs. NCBI nr
Match: gi|823231494|ref|XP_012448444.1| (PREDICTED: uncharacterized protein LOC105771548 [Gossypium raimondii]) HSP 1 Score: 300.1 bits (767), Expect = 3.4e-78 Identity = 149/233 (63.95%), Postives = 182/233 (78.11%), Query Frame = 1
BLAST of CmaCh05G005890 vs. NCBI nr
Match: gi|590573510|ref|XP_007012142.1| (SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase-related, putative [Theobroma cacao]) HSP 1 Score: 299.3 bits (765), Expect = 5.8e-78 Identity = 146/230 (63.48%), Postives = 184/230 (80.00%), Query Frame = 1
BLAST of CmaCh05G005890 vs. NCBI nr
Match: gi|950973015|ref|XP_014500637.1| (PREDICTED: uncharacterized protein LOC106761588 [Vigna radiata var. radiata]) HSP 1 Score: 296.2 bits (757), Expect = 4.9e-77 Identity = 142/228 (62.28%), Postives = 173/228 (75.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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