CmaCh11G016650 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGACGAGGTTCGATTGTTTTGTCATGGCGGTGAGCGCGAGACATCTTTTGGAGATGCCACTACCCAAGGTGCATGAAGAGCTTTCGAAGCCAGAAGTACCCAGTTTGTCAAAGCCCGAGCTTCTTCCGTTGCCGAAGGTTGAGTTGCCTCCTTTGGAAAAGCCTAAAATGCTTGAATTTTCGAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGAGGTACCCGAAGTACCAGAATTGCCTAATGTGCCTAAACCTGAGCTCCCTAAGTTGCCGGAATTGACACCTCTCCCAAAGCTTGTTTTTCCTACCCTTCCAAAGGACATTCCTATTCCTTCGTTCAACCCACCACATACATCTACCATTAAACCTTGA ATGTTGACGAGGTTCGATTGTTTTGTCATGGCGGTGAGCGCGAGACATCTTTTGGAGATGCCACTACCCAAGGTGCATGAAGAGCTTTCGAAGCCAGAAGTACCCAGTTTGTCAAAGCCCGAGCTTCTTCCGTTGCCGAAGGTTGAGTTGCCTCCTTTGGAAAAGCCTAAAATGCTTGAATTTTCGAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGAGGTACCCGAAGTACCAGAATTGCCTAATGTGCCTAAACCTGAGCTCCCTAAGTTGCCGGAATTGACACCTCTCCCAAAGCTTGTTTTTCCTACCCTTCCAAAGGACATTCCTATTCCTTCGTTCAACCCACCACATACATCTACCATTAAACCTTGA ATGTTGACGAGGTTCGATTGTTTTGTCATGGCGGTGAGCGCGAGACATCTTTTGGAGATGCCACTACCCAAGGTGCATGAAGAGCTTTCGAAGCCAGAAGTACCCAGTTTGTCAAAGCCCGAGCTTCTTCCGTTGCCGAAGGTTGAGTTGCCTCCTTTGGAAAAGCCTAAAATGCTTGAATTTTCGAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGAGGTACCCGAAGTACCAGAATTGCCTAATGTGCCTAAACCTGAGCTCCCTAAGTTGCCGGAATTGACACCTCTCCCAAAGCTTGTTTTTCCTACCCTTCCAAAGGACATTCCTATTCCTTCGTTCAACCCACCACATACATCTACCATTAAACCTTGA MLTRFDCFVMAVSARHLLEMPLPKVHEELSKPEVPSLSKPELLPLPKVELPPLEKPKMLEFSKPELPKLPQLPKFEVPEVPELPNVPKPELPKLPELTPLPKLVFPTLPKDIPIPSFNPPHTSTIKP
BLAST of CmaCh11G016650 vs. Swiss-Prot
Match: PRAX_BOVIN (Periaxin OS=Bos taurus GN=PRX PE=1 SV=3) HSP 1 Score: 51.6 bits (122), Expect = 7.3e-06 Identity = 49/125 (39.20%), Postives = 73/125 (58.40%), Query Frame = 1
BLAST of CmaCh11G016650 vs. TrEMBL
Match: A0A067EC93_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g046981mg PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 7.1e-16 Identity = 65/135 (48.15%), Postives = 83/135 (61.48%), Query Frame = 1
BLAST of CmaCh11G016650 vs. TrEMBL
Match: A0A067E8H7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031697mg PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.6e-15 Identity = 68/135 (50.37%), Postives = 84/135 (62.22%), Query Frame = 1
BLAST of CmaCh11G016650 vs. TrEMBL
Match: M5VLD6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023337mg PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-14 Identity = 70/161 (43.48%), Postives = 81/161 (50.31%), Query Frame = 1
BLAST of CmaCh11G016650 vs. TrEMBL
Match: A0A059BAU3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00975 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.3e-14 Identity = 62/124 (50.00%), Postives = 81/124 (65.32%), Query Frame = 1
BLAST of CmaCh11G016650 vs. TrEMBL
Match: A0A059BBD0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00980 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.0e-14 Identity = 58/119 (48.74%), Postives = 77/119 (64.71%), Query Frame = 1
BLAST of CmaCh11G016650 vs. TAIR10
Match: AT5G09530.1 (AT5G09530.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 72.4 bits (176), Expect = 2.3e-13 Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 1
BLAST of CmaCh11G016650 vs. TAIR10
Match: AT5G09520.1 (AT5G09520.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 65.1 bits (157), Expect = 3.6e-11 Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 1
BLAST of CmaCh11G016650 vs. NCBI nr
Match: gi|659110271|ref|XP_008455139.1| (PREDICTED: periaxin-like [Cucumis melo]) HSP 1 Score: 147.5 bits (371), Expect = 1.6e-32 Identity = 95/179 (53.07%), Postives = 107/179 (59.78%), Query Frame = 1
BLAST of CmaCh11G016650 vs. NCBI nr
Match: gi|659110269|ref|XP_008455138.1| (PREDICTED: periaxin-like [Cucumis melo]) HSP 1 Score: 137.5 bits (345), Expect = 1.6e-29 Identity = 92/192 (47.92%), Postives = 108/192 (56.25%), Query Frame = 1
BLAST of CmaCh11G016650 vs. NCBI nr
Match: gi|778724535|ref|XP_011658824.1| (PREDICTED: periaxin-like [Cucumis sativus]) HSP 1 Score: 135.2 bits (339), Expect = 8.0e-29 Identity = 85/157 (54.14%), Postives = 96/157 (61.15%), Query Frame = 1
BLAST of CmaCh11G016650 vs. NCBI nr
Match: gi|449438230|ref|XP_004136892.1| (PREDICTED: periaxin-like [Cucumis sativus]) HSP 1 Score: 134.0 bits (336), Expect = 1.8e-28 Identity = 88/175 (50.29%), Postives = 101/175 (57.71%), Query Frame = 1
BLAST of CmaCh11G016650 vs. NCBI nr
Match: gi|778724533|ref|XP_011658823.1| (PREDICTED: periaxin-like [Cucumis sativus]) HSP 1 Score: 128.3 bits (321), Expect = 9.8e-27 Identity = 87/165 (52.73%), Postives = 96/165 (58.18%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |