CmaCh11G014700 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh11G014700
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionSuccinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
LocationCma_Chr11 : 9682413 .. 9685973 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCCACTCTTCCTTCTTCCTACATCTGATAGGTTCTTTGTTTCTCTCTCTGTCTCTCCATTTCTCTTTCTTCGAGGCAACAATGGCGACTGGAATCCTGAGGAGGGCAATATCTAGGGTTTCTGCAACTTCACCTTCAAGATTCCTTCGAATTCGAGCTCACGCTTCCGAAGCCGGAGCGCAGAAAGTGGAGCAAAAAGCAGCCGTCTCTTCAACGCTTAAGACGTTCGCTATCTACCGATGGAACCCCGATAGCCCTTCCAAACCAGAGCTTAAGGAGTACAAGATCGATCTAAAAGACTGTGGTCCTATGGTGCTCGATGCTCTAATCAAAATCAAGAATGAGATCGATCCGACTCTGACCTTCCGCCGCTCGTGCCGAGAGGGGATCTGCGGGTCCTGTGCGATGAACATCGATGGATGTAATGGTTTGGCTTGCTTGACGAAGATTCCATCCGATGCTTCGTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGATATGACGAATTTTTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAGCCGTCTGTGCCGGGGAAGGAGATTCTTCAGAGTAAGCAAGATAGGGCTAAGTTGGATGGGATGTATGAATGTATTTTGTGTGCATGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCATATCTTGGACCAGCTGCCTTGCTCCATGCCAATAGGTAATTTCCCCACTTTTGTTCTTCGTTTATTCTTTGATTCTCTGTTTGCTAGAAATGAATAGAAAACAGGGTCTGTATAGAGGAATTAAGAAGCTACTTTTGAAGGATGTATATGGGTGTTCATGCTTATTCCTGAACTTTTGGAAGATTCAGAATCGTATTTATTAAGTTTCATTTTGTTGGATTGAAAGTTGGCAGCAATAGTTTGGTAATTTAGGTACTCTATTTGAGGGCTTAAGTGCGTTTTGAGGAGCTAGAAAACGTGTAAATCCAAAGCATTAAAATGGTCTTTTATTGAAGATTTCCAAGGGAAAGAAAAGTTAACAACGAATGAAGAGAGCTTATCAAAAGAAGGGAAATTTTATATATGGAAATGAGAGGAGGAAGAACAGTCATGGGGGTATCAAAAGGAATTGAAGAAACTGGAGAACTTATTGAGGTGTGTTCAGATCCCATTTGTAGGCCTGGAGGTTGGGCACAGCATCTGTCGAGGTGTGTGTAGGTCGGGGATCGTTCTTAGTACGGTCCTACAATTATCATATTTAAAAGCCCTTACGGTACTAACAAATCAGTAGTTTCTTATTTCACACAACTCTTGCCTCATCAAGGATTAGTCTGGTTATGTCCTCTCAGTTCCTAGAAGGTGCTTTCGGTCTCCTGCTTGGAAAATAAGCCCTTGCGTGGTAGGACATTTATGATTTGATCGGGTGTCTATTGTATAGAGAATCAAGTAATTTCATTTGGTTGCTTTATCTATGTTCGACAAAGGCTTGGATGCCTTGGTAGACTTAATCTGAAACTCATTTGTTTGCCTTAGTTTCTTGGTGGGTTTGAATCTTAGTTGTGAGATCCCTCATCGGTTGGAGAGGGGAACAAAGCATTCCTTATAAGAGTGTGGAAACCTCTCTCTAGCATATGCGTTTTAAAACCTTGAGAGGAAGCCCAAAGAGGACAATATCTGCTAGCATTACATTAGTCCTTACGTTTTAGTAGTTCAATTAGTGGAGTGTGGAGGATGTCTGAAAAGTTTTGCTGATATTGCATAAAAGAGTTTTTGATCCACAACAATTACTCAAGAACATGATAGTAAGCTTTATTCGTGACGTTTGGAAGCCAAAATTTGAATATGATATTGTAACGGTCCAGATCCATCACTAGTAGATATTGTCATTTTTGGGTGTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGAAAGGTTTCCACACTTATAAAGGGTGATCGTTCTCCTCCCCAACCAATGTGAGATATCAAAGATATGCTTCCTACGACAATCAAAGAGCTCAACCTTTTATAGATGACTGCTCAGGAAACTTTTCTTCATCATTTTACTGACCTCCTACATCAGGGAGAAAGTCGTACATGTTCTATGTGGTATTAGTTTGTTGAATGCATTGTAATCATATGAGAACTTAGAATCAATAACCGCCTAGAGTTGGCTTATAGTAAGGACCCATATAAATAATATAAATAATGTAGATCTTAGAGGCAATGGTTCAAACCATGATGGCCAATGGCCATTTACTTAGAATTTAATTTCTACAAATTTCATCCCTTGGAATTTACTTAGAAGCAAAGGTAATTGCATGATTTATTTGTTCCGTTCTTTCACCTCACAGTGTTCTAATTACAAAACTGTCCCTTTCATTCCCCTTTGTACATGCAGGTGGATAAGTGATAGTCGTGACGAATTCACCAAGGAGCGGCTCGAGGCAATAAATGACGAATTCAAGCTCTATCGTTGTCATACCATACTGAACTGTGCCCGTGCCTGTCCGAAGGGTTTGAATCCTGGAAAACAGATTCAACATATCAAACGCCTTCAGCTCGTGGGCTGAGCCTAAGTTTCAAGGTACACGAAACACAATAATGTTCTTTTCATTCAGTTATGGAATGAATATCTTGTGAGAACTCATGAGCAATGTGATTTTGATCTAATAACTTGTGGATCATTGACTTTCCACACTTTCTGTACTTAAGATTTGATCTTTAGTATTTATCTGTCTCCAAATAAATGTTGACAGAAACCTCCTGGCTTCTCGAGTTGTCGTTCTGCGATCATCCTTTATTCTTTTTATTTGATAAAAAAATTATGCTCCGTTTTCATTTCCCAGTTCGATCACCTTCCTGTGTCGAAACTGCCATAGTTTAAGCATCCATCTTGTAACGGCCTAGGCCCACCGCTAGCAGATATTGTTCTCTTTGGACTTTTCCTTTTAGGCTTCTCTTCTATGTTTTTAAAATGCATCTTCCAGTGAGAAGTTTCTACACCCTTATAATGAGTGTTTTGTTCTCCTTCCCAACCAATGTGGGATCTCACAATCTACCTCTCTTCAGGGCCTAACGTCTTCATTGACACTCGTTCCTTTCTCCAATCGATGTGGGACCCCCACCAAATCCACCCTCTTTGAGGTCATGCGTCCTTGCTGGCACATCGCCTCGTGTCTACTCCCCTTCGAGTGACAGCTTCCTCTCTAGCACATCGCTCAGTGTCTGACTTTGATACCAATTGTAACGGCTCAGGCCCACTGCTAGCATAGAGAAGTTTTCACACCCTTATAAAGGTCGAATAGTTCGGTTTTAAACCGAAACCTAAGAGCCCATTGGTTGTTTTTGTTCAAAACATCCGAAAGCATGATCTTGTGCACACCCTGGTTGCCATCATGAACTTCAAATTCTAGTGTAATTTTTTTTTTAACTGAATGTTCGAATTATAAATGAACACTTCGGATGCTATCGTTTTTTTACCTTAGGTGGTTTGGATGCTATCATTTTTTAACCACTC

mRNA sequence

AGCCACTCTTCCTTCTTCCTACATCTGATAGGTTCTTTGTTTCTCTCTCTGTCTCTCCATTTCTCTTTCTTCGAGGCAACAATGGCGACTGGAATCCTGAGGAGGGCAATATCTAGGGTTTCTGCAACTTCACCTTCAAGATTCCTTCGAATTCGAGCTCACGCTTCCGAAGCCGGAGCGCAGAAAGTGGAGCAAAAAGCAGCCGTCTCTTCAACGCTTAAGACGTTCGCTATCTACCGATGGAACCCCGATAGCCCTTCCAAACCAGAGCTTAAGGAGTACAAGATCGATCTAAAAGACTGTGGTCCTATGGTGCTCGATGCTCTAATCAAAATCAAGAATGAGATCGATCCGACTCTGACCTTCCGCCGCTCGTGCCGAGAGGGGATCTGCGGGTCCTGTGCGATGAACATCGATGGATGTAATGGTTTGGCTTGCTTGACGAAGATTCCATCCGATGCTTCGTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGATATGACGAATTTTTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAGCCGTCTGTGCCGGGGAAGGAGATTCTTCAGAGTAAGCAAGATAGGGCTAAGTTGGATGGGATGTATGAATGTATTTTGTGTGCATGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCATATCTTGGACCAGCTGCCTTGCTCCATGCCAATAGGTGGATAAGTGATAGTCGTGACGAATTCACCAAGGAGCGGCTCGAGGCAATAAATGACGAATTCAAGCTCTATCGTTGTCATACCATACTGAACTGTGCCCGTGCCTGTCCGAAGGGTTTGAATCCTGGAAAACAGATTCAACATATCAAACGCCTTCAGCTCGTGGGCTGAGCCTAAGTTTCAAGGTACACGAAACACAATAATGTTCTTTTCATTCAGTTATGGAATGAATATCTTGTGAGAACTCATGAGCAATGTGATTTTGATCTAATAACTTGTGGATCATTGACTTTCCACACTTTCTGTACTTAAGATTTGATCTTTAGTATTTATCTGTCTCCAAATAAATGTTGACAGAAACCTCCTGGCTTCTCGAGTTGTCGTTCTGCGATCATCCTTTATTCTTTTTATTTGATAAAAAAATTATGCTCCGTTTTCATTTCCCAGTTCGATCACCTTCCTGTGTCGAAACTGCCATAGTTTAAGCATCCATCTTGTAACGGCCTAGGCCCACCGCTAGCAGATATTGTTCTCTTTGGACTTTTCCTTTTAGGCTTCTCTTCTATGTTTTTAAAATGCATCTTCCAGTGAGAAGTTTCTACACCCTTATAATGAGTGTTTTGTTCTCCTTCCCAACCAATGTGGGATCTCACAATCTACCTCTCTTCAGGGCCTAACGTCTTCATTGACACTCGTTCCTTTCTCCAATCGATGTGGGACCCCCACCAAATCCACCCTCTTTGAGGTCATGCGTCCTTGCTGGCACATCGCCTCGTGTCTACTCCCCTTCGAGTGACAGCTTCCTCTCTAGCACATCGCTCAGTGTCTGACTTTGATACCAATTGTAACGGCTCAGGCCCACTGCTAGCATAGAGAAGTTTTCACACCCTTATAAAGGTCGAATAGTTCGGTTTTAAACCGAAACCTAAGAGCCCATTGGTTGTTTTTGTTCAAAACATCCGAAAGCATGATCTTGTGCACACCCTGGTTGCCATCATGAACTTCAAATTCTAGTGTAATTTTTTTTTTAACTGAATGTTCGAATTATAAATGAACACTTCGGATGCTATCGTTTTTTTACCTTAGGTGGTTTGGATGCTATCATTTTTTAACCACTC

Coding sequence (CDS)

ATGGCGACTGGAATCCTGAGGAGGGCAATATCTAGGGTTTCTGCAACTTCACCTTCAAGATTCCTTCGAATTCGAGCTCACGCTTCCGAAGCCGGAGCGCAGAAAGTGGAGCAAAAAGCAGCCGTCTCTTCAACGCTTAAGACGTTCGCTATCTACCGATGGAACCCCGATAGCCCTTCCAAACCAGAGCTTAAGGAGTACAAGATCGATCTAAAAGACTGTGGTCCTATGGTGCTCGATGCTCTAATCAAAATCAAGAATGAGATCGATCCGACTCTGACCTTCCGCCGCTCGTGCCGAGAGGGGATCTGCGGGTCCTGTGCGATGAACATCGATGGATGTAATGGTTTGGCTTGCTTGACGAAGATTCCATCCGATGCTTCGTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGATATGACGAATTTTTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAGCCGTCTGTGCCGGGGAAGGAGATTCTTCAGAGTAAGCAAGATAGGGCTAAGTTGGATGGGATGTATGAATGTATTTTGTGTGCATGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCATATCTTGGACCAGCTGCCTTGCTCCATGCCAATAGGTGGATAAGTGATAGTCGTGACGAATTCACCAAGGAGCGGCTCGAGGCAATAAATGACGAATTCAAGCTCTATCGTTGTCATACCATACTGAACTGTGCCCGTGCCTGTCCGAAGGGTTTGAATCCTGGAAAACAGATTCAACATATCAAACGCCTTCAGCTCGTGGGCTGA

Protein sequence

MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG
Homology
[Close]
BLAST of CmaCh11G014700 vs. Swiss-Prot
Match: SDHB2_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH2-2 PE=1 SV=2)

HSP 1 Score: 458.0 bits (1177), Expect = 7.4e-128
Identity = 219/280 (78.21%), Postives = 244/280 (87.14%), Query Frame = 1 

Query: 1   MATGILRRAISRVSA--TSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDS 60
           MA G++ R +   S+  ++ +R +  R  ++ + AQ         ++LKTF IYRWNPD+
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KPEL++YKIDLKDCGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKIPSDAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQS 180
           CLTKI S +  +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEA 240
           K+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           I+DEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ  G
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]
BLAST of CmaCh11G014700 vs. Swiss-Prot
Match: SDHB1_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH2-1 PE=1 SV=2)

HSP 1 Score: 453.4 bits (1165), Expect = 1.8e-126
Identity = 218/278 (78.42%), Postives = 238/278 (85.61%), Query Frame = 1 

Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQ---KVEQKAAVSSTLKTFAIYRWNPD 60
           MA+G++ R +    +   +    I A  +  GA+   K        S LKTF IYRWNPD
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPEL+ Y+IDLKDCGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSDAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQ 180
           ACLTKI  +AS +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLE 240
           SK+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLE
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]
BLAST of CmaCh11G014700 vs. Swiss-Prot
Match: SDHB1_ORYSJ (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH2-1 PE=1 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 1.0e-116
Identity = 205/279 (73.48%), Postives = 228/279 (81.72%), Query Frame = 1 

Query: 2   ATGILRRAISRVSATSP---SRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDS 61
           A  +LRR+ +  +  SP   SR +  + H+S         KA  ++  KTF+IYRW+PDS
Sbjct: 3   AAALLRRSPAARALLSPALSSRLVASKPHSSSPAPPPPPSKAGANT--KTFSIYRWDPDS 62

Query: 62  PS-KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 121
           PS KP LK+YK+DL DCGPMVLD L+KIKNE DP+LTFRRSCREGICGSCAMNIDG NGL
Sbjct: 63  PSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGL 122

Query: 122 ACLTKIPSDAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQ 181
           ACLTKI S +S STI+PLPHMFVIKDLVVDMTNFYNQYKS+EPWLKRK  P  PGKEI Q
Sbjct: 123 ACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKRKDAPPQPGKEIPQ 182

Query: 182 SKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLE 241
           +K DRAKLDGMYECILCACCSTSCPSYWWNPE YLGPAALLHANRWI DSRD+FTKERL+
Sbjct: 183 TKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDQFTKERLD 242

Query: 242 AINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQL 276
           +INDEFKLYRCHTI NC  ACPKGLNP K I  IK+LQL
Sbjct: 243 SINDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQL 279

[Close]
BLAST of CmaCh11G014700 vs. Swiss-Prot
Match: SDHB_CANGA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SDH2 PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 7.0e-94
Identity = 160/230 (69.57%), Postives = 182/230 (79.13%), Query Frame = 1 

Query: 46  LKTFAIYRWNPDSPS-KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGIC 105
           LKTF IYRWNPD P+ KP L+EYK+DL+DCGPMVLDAL+KIKNE D TLTFRRSCREGIC
Sbjct: 20  LKTFKIYRWNPDKPTEKPHLQEYKVDLEDCGPMVLDALLKIKNEQDATLTFRRSCREGIC 79

Query: 106 GSCAMNIDGCNGLACLTKIPSDASST--ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK 165
           GSCAMNI G N LACL KI  D S T  I PLPHMF++KDLV D+T FY QYKSI+P+L+
Sbjct: 80  GSCAMNIGGANTLACLCKIDQDESKTTKIYPLPHMFIVKDLVPDLTGFYQQYKSIQPYLQ 139

Query: 166 RKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRW 225
           R   P+  GKE+LQS  DR KLDG+YECILCACCSTSCPSYWWN E YLGPA L+ A RW
Sbjct: 140 RTDYPA-DGKEVLQSIDDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLMQAYRW 199

Query: 226 ISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKR 273
           + DSRD+ TK R   + +   LYRCHTI+NC R CPKGLNPG+ I  IK+
Sbjct: 200 LIDSRDQATKARRTMLQNSMSLYRCHTIMNCTRTCPKGLNPGRSIAEIKK 248

[Close]
BLAST of CmaCh11G014700 vs. Swiss-Prot
Match: SDHB_CHICK (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Gallus gallus GN=SDHB PE=1 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 7.0e-94
Identity = 167/268 (62.31%), Postives = 197/268 (73.51%), Query Frame = 1 

Query: 18  PSRFLRI---------RAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS-KPELKEY 77
           P+RFLR            H    GAQ     AA +S +K F+IYRW+PD P  KP ++ Y
Sbjct: 15  PARFLRAGLRPVRGLEAVHGICRGAQTA---AAATSRIKKFSIYRWDPDKPGDKPRMQTY 74

Query: 78  KIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSDA 137
           ++DL  CGPMVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G N LAC  KI  D 
Sbjct: 75  EVDLNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDL 134

Query: 138 SST--ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLD 197
           S T  I PLPHM+V+KDLV D++NFY QYKSIEP+LK+K E     ++ LQS +DR KLD
Sbjct: 135 SKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLD 194

Query: 198 GMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLY 257
           G+YECILCACCSTSCPSYWWN + YLGPA L+ A RW+ DSRD++T+ERL  + D F LY
Sbjct: 195 GLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLY 254

Query: 258 RCHTILNCARACPKGLNPGKQIQHIKRL 274
           RCHTI+NC R CPKGLNPGK I  IK++
Sbjct: 255 RCHTIMNCTRTCPKGLNPGKAIAEIKKM 279

[Close]
BLAST of CmaCh11G014700 vs. TrEMBL
Match: E5GCD7_CUCME (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 4.3e-151
Identity = 258/277 (93.14%), Postives = 268/277 (96.75%), Query Frame = 1 

Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRR +SRVSA+SPSRF+RIRAHASEA AQ+VEQKA  SS LKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPEL+EYKIDLK+CGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPS  SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEP VPGKEILQSK+D
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQHIK LQL+G
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]
BLAST of CmaCh11G014700 vs. TrEMBL
Match: A0A0A0LBZ3_CUCSA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis sativus GN=Csa_3G595230 PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 6.3e-150
Identity = 258/277 (93.14%), Postives = 269/277 (97.11%), Query Frame = 1 

Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRRA+SRVSA+SPSRFLRIRAHASEA AQ+V+QKAA SS LKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPEL+EYKIDLK+CGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKI S  SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEP VPGKEILQSK+D
Sbjct: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERL+AIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277

[Close]
BLAST of CmaCh11G014700 vs. TrEMBL
Match: A0A067LPB8_JATCU (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Jatropha curcas GN=JCGZ_10199 PE=3 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 2.9e-139
Identity = 239/281 (85.05%), Postives = 261/281 (92.88%), Query Frame = 1 

Query: 1   MATGILRRAIS--RVSATSP--SRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNP 60
           MATG++RR +S  RVS+++P  +RF+  R HASEA AQKVE KA  S+ LKTF IYRWNP
Sbjct: 1   MATGLIRRGVSIARVSSSAPFTARFVPARFHASEAEAQKVEPKATSSTNLKTFQIYRWNP 60

Query: 61  DSPSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNG 120
           D+P+KP+L++Y+IDLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNG
Sbjct: 61  DNPAKPQLQDYQIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNG 120

Query: 121 LACLTKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQ 180
           LACLTKIPS  SSTITPLPHM+VIKDLVVDMTNFYNQYKSIEPWLKRK+ P VPGKEILQ
Sbjct: 121 LACLTKIPSGNSSTITPLPHMYVIKDLVVDMTNFYNQYKSIEPWLKRKNPPQVPGKEILQ 180

Query: 181 SKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLE 240
           SK+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+T ERLE
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTNERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           AINDEFKLYRCHTILNCARACPKGLNPGKQI +IKRL+LVG
Sbjct: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIMNIKRLELVG 281

[Close]
BLAST of CmaCh11G014700 vs. TrEMBL
Match: W9S8I7_9ROSA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Morus notabilis GN=L484_017682 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 2.7e-137
Identity = 234/274 (85.40%), Postives = 255/274 (93.07%), Query Frame = 1 

Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRRAISRVS+T  S+F+ +R  ASEA AQ+VE KA  S+ LKTF+IYRWNPD   
Sbjct: 1   MATGILRRAISRVSSTQASKFVPLRFLASEAEAQQVEPKAQGSTNLKTFSIYRWNPDKSG 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPEL+ Y+IDLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQNYQIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPS +S+ ITPLPHM+VIKDLVVDMTNFYNQYKSIEPWLKRKS PSVPGKE+LQSK+D
Sbjct: 121 TKIPSGSSTMITPLPHMYVIKDLVVDMTNFYNQYKSIEPWLKRKSPPSVPGKEVLQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI DSRDE+T+ERLE+IND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTEERLESIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQ 275
           EFKLYRCHTILNCA ACPKGLNPG+QIQ+IK+LQ
Sbjct: 241 EFKLYRCHTILNCASACPKGLNPGRQIQNIKKLQ 274

[Close]
BLAST of CmaCh11G014700 vs. TrEMBL
Match: B9SLS5_RICCO (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ricinus communis GN=RCOM_0530950 PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 5.1e-136
Identity = 238/282 (84.40%), Postives = 258/282 (91.49%), Query Frame = 1 

Query: 1   MATGILRRAIS--RVSATSP--SRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNP 60
           MATG+LR+ +S  RVS T+P  SR +  R HASEA AQKVE KA+ +++LKTF IYRWNP
Sbjct: 1   MATGLLRKGLSIARVSKTAPFTSRLIPTRFHASEAEAQKVEPKASSTASLKTFQIYRWNP 60

Query: 61  DSPSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNG 120
           D+PSKP L++YKIDLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNG
Sbjct: 61  DNPSKPTLQDYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNG 120

Query: 121 LACLTKIPSDA-SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEIL 180
           LACLTKI S + SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+ P V GKEI 
Sbjct: 121 LACLTKISSGSTSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPVDGKEIP 180

Query: 181 QSKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERL 240
           QSK+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+T ERL
Sbjct: 181 QSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTNERL 240

Query: 241 EAINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           +AINDEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ+VG
Sbjct: 241 DAINDEFKLYRCHTILNCARACPKGLNPGKQIMHIKQLQMVG 282

[Close]
BLAST of CmaCh11G014700 vs. TAIR10
Match: AT5G40650.1 (AT5G40650.1 succinate dehydrogenase 2-2)

HSP 1 Score: 458.0 bits (1177), Expect = 4.2e-129
Identity = 219/280 (78.21%), Postives = 244/280 (87.14%), Query Frame = 1 

Query: 1   MATGILRRAISRVSA--TSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDS 60
           MA G++ R +   S+  ++ +R +  R  ++ + AQ         ++LKTF IYRWNPD+
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KPEL++YKIDLKDCGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKIPSDAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQS 180
           CLTKI S +  +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEA 240
           K+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           I+DEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ  G
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]
BLAST of CmaCh11G014700 vs. TAIR10
Match: AT3G27380.1 (AT3G27380.1 succinate dehydrogenase 2-1)

HSP 1 Score: 453.4 bits (1165), Expect = 1.0e-127
Identity = 218/278 (78.42%), Postives = 238/278 (85.61%), Query Frame = 1 

Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQ---KVEQKAAVSSTLKTFAIYRWNPD 60
           MA+G++ R +    +   +    I A  +  GA+   K        S LKTF IYRWNPD
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPEL+ Y+IDLKDCGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSDAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQ 180
           ACLTKI  +AS +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLE 240
           SK+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLE
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]
BLAST of CmaCh11G014700 vs. TAIR10
Match: AT5G65165.1 (AT5G65165.1 succinate dehydrogenase 2-3)

HSP 1 Score: 315.1 bits (806), Expect = 4.4e-86
Identity = 152/244 (62.30%), Postives = 180/244 (73.77%), Query Frame = 1 

Query: 37  EQKAAVSSTLKTFAIYRWNPDSP-SKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTF 96
           E++       K F IYRWNPD P SKP L+ + +DL  CGPMVLD L KIK E D +L++
Sbjct: 57  EKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAEDDASLSY 116

Query: 97  RRSCREGICGSCAMNIDGCNGLACLTKIPSDAS--STITPLPHMFVIKDLVVDMTNFYNQ 156
           RRSCREGICGSC+MNIDG N +ACL  I  + S  + ITPLPHM+VIKDLVVD+TNFY Q
Sbjct: 117 RRSCREGICGSCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVDLTNFYQQ 176

Query: 157 YKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGP 216
           YKS+EPWLK +  P   G+E  QS +DR KLDG+YECILCACC+TSCPSYWWNPE + GP
Sbjct: 177 YKSMEPWLKTRKPPK-DGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWNPEEFPGP 236

Query: 217 AALLHANRWISDSRDEFTKERLEAIND-EFKLYRCHTILNCARACPKGLNPGKQIQHIKR 276
           AALL A RWISDSRDE+ +ERL+AI + E K+YRC  I NC   CPKGLNP   I  +K 
Sbjct: 237 AALLQAYRWISDSRDEYREERLQAITESETKVYRCRAIKNCTATCPKGLNPASAILKMKS 296

[Close]
BLAST of CmaCh11G014700 vs. NCBI nr
Match: gi|659098224|ref|XP_008450036.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 542.0 bits (1395), Expect = 6.2e-151
Identity = 258/277 (93.14%), Postives = 268/277 (96.75%), Query Frame = 1 

Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRR +SRVSA+SPSRF+RIRAHASEA AQ+VEQKA  SS LKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPEL+EYKIDLK+CGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPS  SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEP VPGKEILQSK+D
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQHIK LQL+G
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]
BLAST of CmaCh11G014700 vs. NCBI nr
Match: gi|449455896|ref|XP_004145686.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 538.1 bits (1385), Expect = 9.0e-150
Identity = 258/277 (93.14%), Postives = 269/277 (97.11%), Query Frame = 1 

Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRRA+SRVSA+SPSRFLRIRAHASEA AQ+V+QKAA SS LKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPEL+EYKIDLK+CGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKI S  SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEP VPGKEILQSK+D
Sbjct: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERL+AIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277

[Close]
BLAST of CmaCh11G014700 vs. NCBI nr
Match: gi|1012120315|ref|XP_015962201.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 505.4 bits (1300), Expect = 6.5e-140
Identity = 237/274 (86.50%), Postives = 258/274 (94.16%), Query Frame = 1 

Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATG+LRR++SRV ++  S+   IRAHASE  AQ+V+ KA  +ST+KTF IYRWNPDSPS
Sbjct: 1   MATGLLRRSLSRVPSSPASKLALIRAHASEPEAQQVDAKARGTSTVKTFQIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELK Y+I+LK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKNYEINLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPS ++STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+ P+VPGKEILQSK+D
Sbjct: 121 TKIPSSSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPTVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           R+KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+T+ERLEAIND
Sbjct: 181 RSKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTQERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQ 275
           EFKLYRCHTILNCARACPKGLNPGKQIQHIK LQ
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQ 274

[Close]
BLAST of CmaCh11G014700 vs. NCBI nr
Match: gi|1021501923|ref|XP_016194164.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 505.0 bits (1299), Expect = 8.4e-140
Identity = 238/274 (86.86%), Postives = 256/274 (93.43%), Query Frame = 1 

Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATG+LRR++SRV ++  S+   IRAHASE  AQ+V+ KA  +ST+KTF IYRWNPDSPS
Sbjct: 1   MATGLLRRSLSRVPSSPASKLALIRAHASEPEAQQVDAKARGTSTMKTFQIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELK Y+I+LK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKNYEINLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPS   STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+ P+VPGKEILQSK+D
Sbjct: 121 TKIPSSNVSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPTVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           R+KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAIND
Sbjct: 181 RSKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQ 275
           EFKLYRCHTILNCARACPKGLNPGKQIQHIK LQ
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQ 274

[Close]
BLAST of CmaCh11G014700 vs. NCBI nr
Match: gi|1012194180|ref|XP_015971399.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 504.6 bits (1298), Expect = 1.1e-139
Identity = 237/274 (86.50%), Postives = 257/274 (93.80%), Query Frame = 1 

Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATG+LRR++SRV ++  S+   IRAHASE  +Q+V+ KA  +ST+KTF IYRWNPDSPS
Sbjct: 1   MATGLLRRSLSRVPSSPASKLALIRAHASEPESQQVDAKARGTSTMKTFQIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELK Y+I+LK+CGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKNYEINLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPS  +STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+ PSVPGKEILQSK+D
Sbjct: 121 TKIPSSNASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPSVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           R+KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAIND
Sbjct: 181 RSKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQ 275
           EFKLYRCHTILNCARACPKGLNPGKQIQHIK LQ
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQ 274

The following BLAST results are available for this feature:
BLAST of CmaCh11G014700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SDHB2_ARATH7.4e-12878.21Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ara... [more]
SDHB1_ARATH1.8e-12678.42Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ara... [more]
SDHB1_ORYSJ1.0e-11673.48Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ory... [more]
SDHB_CANGA7.0e-9469.57Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Candi... [more]
SDHB_CHICK7.0e-9462.31Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Gallu... [more]
BLAST of CmaCh11G014700 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCD7_CUCME4.3e-15193.14Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum... [more]
A0A0A0LBZ3_CUCSA6.3e-15093.14Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum... [more]
A0A067LPB8_JATCU2.9e-13985.05Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Jatro... [more]
W9S8I7_9ROSA2.7e-13785.40Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Morus... [more]
B9SLS5_RICCO5.1e-13684.40Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ricin... [more]
BLAST of CmaCh11G014700 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G40650.14.2e-12978.21 succinate dehydrogenase 2-2[more]
AT3G27380.11.0e-12778.42 succinate dehydrogenase 2-1[more]
AT5G65165.14.4e-8662.30 succinate dehydrogenase 2-3[more]
BLAST of CmaCh11G014700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659098224|ref|XP_008450036.1|6.2e-15193.14PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|449455896|ref|XP_004145686.1|9.0e-15093.14PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|1012120315|ref|XP_015962201.1|6.5e-14086.50PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|1021501923|ref|XP_016194164.1|8.4e-14086.86PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|1012194180|ref|XP_015971399.1|1.1e-13986.50PREDICTED: succinate dehydrogenase [ubiquinone][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR004489Succ_DH/fum_Rdtase_Fe-S
IPR0060582Fe2S_fd_BS
IPR009051Helical_ferredxn
IPR012675Beta-grasp_dom_sf
IPR0178964Fe4S_Fe-S-bd
IPR0179004Fe4S_Fe_S_CS
IPR025192Succ_DH/fum_Rdtase_N
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0051536iron-sulfur cluster binding
GO:0016491oxidoreductase activity
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045281 succinate dehydrogenase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0051538 3 iron, 4 sulfur cluster binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008177 succinate dehydrogenase (ubiquinone) activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G014700.1CmaCh11G014700.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROFILEPS510852FE2S_FER_2coord: 60..137
score:
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainunknownSSF542922Fe-2S ferredoxin-likecoord: 45..146
score: 8.26
IPR004489Succinate dehydrogenase/fumarate reductase iron-sulphur proteinTIGRFAMsTIGR00384TIGR00384coord: 51..271
score: 2.0
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 99..107
scor
IPR009051Alpha-helical ferredoxinunknownSSF46548alpha-helical ferredoxincoord: 147..273
score: 7.85
IPR012675Beta-grasp domainGENE3DG3DSA:3.10.20.30coord: 42..146
score: 8.4
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROFILEPS513794FE4S_FER_2coord: 180..210
score: 7
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 190..201
scor
IPR025192Succinate dehydogenase/fumarate reductase N-terminalPFAMPF13085Fer2_3coord: 48..152
score: 7.1
NoneNo IPR availableGENE3DG3DSA:1.10.1060.10coord: 147..274
score: 5.7
NoneNo IPR availablePANTHERPTHR11921SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEINcoord: 2..273
score: 1.2E
NoneNo IPR availablePANTHERPTHR11921:SF29SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIALcoord: 2..273
score: 1.2E
NoneNo IPR availablePFAMPF13534Fer4_17coord: 189..262
score: 5.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh11G014700Cucsa.156220Cucumber (Gy14) v1cgycmaB0429
CmaCh11G014700Csa3G595230Cucumber (Chinese Long) v2cmacuB131
CmaCh11G014700MELO3C014824Melon (DHL92) v3.5.1cmameB137
CmaCh11G014700ClCG05G013010Watermelon (Charleston Gray)cmawcgB120
CmaCh11G014700CSPI03G26010Wild cucumber (PI 183967)cmacpiB128
CmaCh11G014700CmoCh14G007030Cucurbita moschata (Rifu)cmacmoB129
CmaCh11G014700CmoCh11G016480Cucurbita moschata (Rifu)cmacmoB117
CmaCh11G014700Lsi05G004740Bottle gourd (USVL1VR-Ls)cmalsiB125
CmaCh11G014700Cp4.1LG03g07090Cucurbita pepo (Zucchini)cmacpeB145
CmaCh11G014700Cp4.1LG04g05620Cucurbita pepo (Zucchini)cmacpeB154
CmaCh11G014700MELO3C014824.2Melon (DHL92) v3.6.1cmamedB149
CmaCh11G014700CsaV3_3G027530Cucumber (Chinese Long) v3cmacucB0148
CmaCh11G014700Cla97C05G094580Watermelon (97103) v2cmawmbB123
CmaCh11G014700Bhi01G001558Wax gourdcmawgoB0108
CmaCh11G014700CsGy3G024360Cucumber (Gy14) v2cgybcmaB298
CmaCh11G014700Carg09692Silver-seed gourdcarcmaB0605
CmaCh11G014700Carg15592Silver-seed gourdcarcmaB0520
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh11G014700CmaCh14G006870Cucurbita maxima (Rimu)cmacmaB131
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh11G014700Watermelon (97103) v2cmawmbB135
CmaCh11G014700Watermelon (97103) v2cmawmbB151
CmaCh11G014700Wax gourdcmawgoB0100
CmaCh11G014700Cucurbita maxima (Rimu)cmacmaB084
CmaCh11G014700Cucurbita maxima (Rimu)cmacmaB121
CmaCh11G014700Cucurbita maxima (Rimu)cmacmaB164
CmaCh11G014700Cucumber (Gy14) v1cgycmaB0538
CmaCh11G014700Cucurbita moschata (Rifu)cmacmoB111
CmaCh11G014700Cucurbita moschata (Rifu)cmacmoB120
CmaCh11G014700Cucurbita moschata (Rifu)cmacmoB157
CmaCh11G014700Wild cucumber (PI 183967)cmacpiB109
CmaCh11G014700Wild cucumber (PI 183967)cmacpiB134
CmaCh11G014700Cucumber (Chinese Long) v2cmacuB113
CmaCh11G014700Cucumber (Chinese Long) v2cmacuB137
CmaCh11G014700Melon (DHL92) v3.5.1cmameB081
CmaCh11G014700Melon (DHL92) v3.5.1cmameB117
CmaCh11G014700Watermelon (Charleston Gray)cmawcgB077
CmaCh11G014700Watermelon (Charleston Gray)cmawcgB134
CmaCh11G014700Watermelon (97103) v1cmawmB077
CmaCh11G014700Cucurbita pepo (Zucchini)cmacpeB130
CmaCh11G014700Cucurbita pepo (Zucchini)cmacpeB152
CmaCh11G014700Bottle gourd (USVL1VR-Ls)cmalsiB107
CmaCh11G014700Bottle gourd (USVL1VR-Ls)cmalsiB135
CmaCh11G014700Cucumber (Gy14) v2cgybcmaB045
CmaCh11G014700Cucumber (Gy14) v2cgybcmaB586
CmaCh11G014700Melon (DHL92) v3.6.1cmamedB119
CmaCh11G014700Silver-seed gourdcarcmaB0513
CmaCh11G014700Silver-seed gourdcarcmaB0958
CmaCh11G014700Silver-seed gourdcarcmaB1450
CmaCh11G014700Cucumber (Chinese Long) v3cmacucB0117
CmaCh11G014700Cucumber (Chinese Long) v3cmacucB0157