CmaCh11G001960 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G001960
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Protein Asterix
Location	Cma_Chr11 : 1003007 .. 1006521 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCGACACTTGAGAGCGAGTCTAGAGATGTCGACACAAGCGAACGATCCACGGCAGCCGTCGGCGGCGAAGCCGTTTGTTTCTCCGGCTGTGAACCCGCAAGATCTTCCCGTCGATTATTCCGGTTTCATCGCCGTAGTTTTTGGCATCGCTGGCGTCATGTTCAGGGTATGCCTGTTTCTTTCCGAGCACTGATACGATAACTATGGGGATCTCACATTTTACTGATGCGATATTCTTGTTTTTCGTTAAAATTGAGCAGTACAAGCTTAGCTCTTGGCTAGCCATCATATTCTGCGCTCAATCGCTTGCTAATATGAGGAACATGGAGAACGATCTCAAGCAGATTTCCATGGCTATGATGTGAGTTTTCTTCCCCTTCCAATCTCTATTTCTTTATTCGTTCATTCGAAGGTTTCTGATGAGTTTTGTGGCATGCACGCGATTTGTTTGATTGTTAATTATTATGCTTATTTCCTGAAAATTTGATTTTGCTGGAACGGAGATGAAATACACTTGGGATCGGAATTGTATCAGTTTAATGGCATTAATTGGTAATTTTGGGTTTGTCCAAAATCTGAACAATCGAAGTTCCGTTTTTTAGGCTGACTTTGACGTTGTCATGTAGATGCAACAGTCGATGTTTTTTAGCTAGGGAATGGAGCTAATTTAATTCTTCAGGGTTCAATCATGCTTGATTGCAAATTAAACTGCCTACTGCGTTGGGGTTTATGATCCTTTCGATAACCTTTACATGTTTATACCATTGATTCGTGTACACATTTCAATCATTTTATCAACGTATAAGTTACTAAAATGATTTTGAAAAAAGTGTCCGCAAACGCAAATGACTATGGAGATATAATCATTAAGAAAATACCTTACGAAAAGACCAAATATACTCTGCATCATATACAAACCAACATCTTCCATCTTTTGCGAAGGGGCCATGGAAGTACATAAAAAAACACCAAAACCTCATCACCAACCAAATTCGCCATAGGATGGAGGATGGAGGAAGCACATCTTTTTGATCGGCCCTTGGATTGGAAACGCTAGGCTAGCCTTGCGGTATCTAATTCTAGCAAAACGGCTTCGATCAAAGAAACATGGAATAATGCCAGCAATTTCTGGGATCCGAAACTTGGTAGGAACCCAAAGAATAACAAAACTACAAAAATGGGTTGAATTAAGCTTTGCCCTCGCCCCAATTATGTTGCTTAAAAAACCAGACTCATTAACATGGCTTCCTAGCACTGACGGAGTCTTCTCCACAAATTTTTTTTTATCATAGACATGGTAAGGAAATCAGCCTAAAAAGATGGAAGCTTTTCCTCTAGTGAAATAGCATATAAAGCCGAAAATCTACAAAAAAATAGTGTCCTACATGACTCTATTTCCACAATTTTTGTTTTTTTAACATAGAGATAGGGATAAGTAAAAGTCATAAACCACATGCTAGCAAAAACAATATGGAAAGGAAATCCCTAAAAAGATGAAGTTTTACACAATGCATATATGCTCAAAATTTATGGAAAAAGATTCTCAATATCTTCGGGAGGCCTCACTTTTCCCAAGTAGGTAAAAGATTTATTGGACATGGCCATAACGTACTACCTCTTTAAGAAAGCAAAAGTCCCCATATGGAAAATTTTCATTATGGCTTTCTTTTGACCATGTGGAAAGAAAGAAATCAAAGAGTATTTGGAGGTAAGACAGACTTATACAAACTCTTCGATAACATTGTTTACCACGTTATATCTTGGTGTAAATTGTCTAATACATTTACTTCATGTGGTCATACCTCTCTCATTGTAAATTGGGATAACACCTTTGGTAAATTTCAATTATGAATGAAATTGTTTCTTAAAAAAAAAAAAAATTAGACTAGGTTAAATGTTATTACCATTATTCAGGTACTTGATTAATTAGCTAATCTATAAGTTTTTAGATACCAAATATTGCAAGGTTGGCCTTGTTATACGAATCCATGAATATCTAAGTTGGCATGATCCCAGTCATAAGAAAAAAGAGTAAGGATAGAATAGATAAGATCAACAATCTCTTACACTTGGAATCTTGTTTTAGGACTTACAGATTCGGAATTGATTGCGGTGCTCAACGGTTTGAGATTTAGGAACTTGATGTTGGTCTTTTATATGCATAATGAACATTCCCCCTTGACAGAGTGGTTCTTACCCTTTCCTTTATCTACGACTTTGGAGTCTTGTAAATTATAATTAATCATCATAAACAATCACTTTCCTCACTAATAGGAACCAGAGAATTTAAATAAAAGTTTGATTAAGAACTTACAAAATAATAAAATACTCTAATTTATCCCAAAGTTATTTGAGGAACTCGAACACATTCTCTCTCAAGTGAACTCAAGCTTAAACGACTAAATAAATGTTGCTTTCACCCCCTTCCGACTGACTCTATTGTTAACTACCTCTCACTAGCAAACTCTTTAGCTAATGATACCAATAATTCTAACTTCTACCCTATTAGTATTCTTGAGGCTATTTGAAACAAAAATATTGCGAAGATTTTAGTTATGCGTGAATAATGAGAGTTCCATCCATTGATTATTCTTCCTTGTTGGTTCAAAATGCTTCTCCTTCGACCTGAATTGGGGTGAGTTGTGGACCCTTAAGTTTGTCTGTTTGATGATTGGTTAAGACAAATGAGAGAGGGTAGCATGATTGTTTACAATGTTAATAACAGTTTCAGGACAAACGGGGCTGAATACAAACCTATGGAGGGTAGGTGGTTTTCAAAACTTTCGTATAAAGTTTATTATATGAAGGTGTTCGTGCCCTGTATTTTTGCCTATATTTATGTAATTTATGTAAAACTTAGTCTAGGCAGGCCAAGTGTCTAATCAAGTTATGTCTAGGCATATTAGATCGTCTTGAGTTGTCTGTCTTGTTTTAATGATTTTTCTTTAGCGTTATCAACAATTTAACATGATTCAATGGAATCGGCTTTATATGTTTGTGACTTCAACTCTTCTTTGGTTTCAAATCCAGGTTTGCCATCATGGGATTGGTAACGAATTACTTGGGTCCTGCACGACCAGGAACAAAGAGTTAAGACTCCTCGCTCAGAATGGTTCTGATGTATTTCTTTTTTTCTTCTCCTCGGCTTAATCTAAGTTAGGATCTTTTTATGGTTGGTGACTCCCTTTTCTATTATGTTTTTAAAGAAGAATATTGGGTGACACAATGAAGGGATGAGTTTGTGGCCAACAATATGCCAGAGGAAAGTGACTAGATTACTCTTCCCATCCAGTAGTAGATACCTAGTGTGGAGCTGAGTGAGACGCTACAATAAATAGAATTTTCTTCAGCATCCATATTTACTTGAATCTCAAACCTCTTTCTGAAAATTAGTTTTCCAAATGGCCACAGGGTGGTTTAAAGATCCAATGATTCGGAAAATTGTGTTGGTGGCCAACTTGCCTATAACTCAACTAGCTAGTACATTTATCATGAACTTGAAGTAGGTGGAGT

mRNA sequence

TATCGACACTTGAGAGCGAGTCTAGAGATGTCGACACAAGCGAACGATCCACGGCAGCCGTCGGCGGCGAAGCCGTTTGTTTCTCCGGCTGTGAACCCGCAAGATCTTCCCGTCGATTATTCCGGTTTCATCGCCGTAGTTTTTGGCATCGCTGGCGTCATGTTCAGGTACAAGCTTAGCTCTTGGCTAGCCATCATATTCTGCGCTCAATCGCTTGCTAATATGAGGAACATGGAGAACGATCTCAAGCAGATTTCCATGGCTATGATGTTTGCCATCATGGGATTGGTAACGAATTACTTGGGTCCTGCACGACCAGGAACAAAGAGTTAAGACTCCTCGCTCAGAATGGTTCTGATGTATTTCTTTTTTTCTTCTCCTCGGCTTAATCTAAGTTAGGATCTTTTTATGGTTGGTGACTCCCTTTTCTATTATGTTTTTAAAGAAGAATATTGGGTGACACAATGAAGGGATGAGTTTGTGGCCAACAATATGCCAGAGGAAAGTGACTAGATTACTCTTCCCATCCAGTAGTAGATACCTAGTGTGGAGCTGAGTGAGACGCTACAATAAATAGAATTTTCTTCAGCATCCATATTTACTTGAATCTCAAACCTCTTTCTGAAAATTAGTTTTCCAAATGGCCACAGGGTGGTTTAAAGATCCAATGATTCGGAAAATTGTGTTGGTGGCCAACTTGCCTATAACTCAACTAGCTAGTACATTTATCATGAACTTGAAGTAGGTGGAGT

Coding sequence (CDS)

ATGTCGACACAAGCGAACGATCCACGGCAGCCGTCGGCGGCGAAGCCGTTTGTTTCTCCGGCTGTGAACCCGCAAGATCTTCCCGTCGATTATTCCGGTTTCATCGCCGTAGTTTTTGGCATCGCTGGCGTCATGTTCAGGTACAAGCTTAGCTCTTGGCTAGCCATCATATTCTGCGCTCAATCGCTTGCTAATATGAGGAACATGGAGAACGATCTCAAGCAGATTTCCATGGCTATGATGTTTGCCATCATGGGATTGGTAACGAATTACTTGGGTCCTGCACGACCAGGAACAAAGAGTTAA

Protein sequence

MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTKS

Homology

[Close]

BLAST of CmaCh11G001960 vs. Swiss-Prot
Match: ASTER_ARATH (Protein Asterix OS=Arabidopsis thaliana GN=At5g07960 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 4.7e-40
Identity = 79/99 (79.80%), Postives = 89/99 (89.90%), Query Frame = 1


Query: 2   STQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQ 61
           ++  NDPRQPSAAKP++   V P+DLPVDYSGFIAV+ G++GVMFRYK+ SWLAIIFCAQ
Sbjct: 8   ASSVNDPRQPSAAKPYIPRPVAPEDLPVDYSGFIAVILGVSGVMFRYKICSWLAIIFCAQ 67

Query: 62  SLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK 101
           SLANMRN+ENDLKQISMAMMFAIMGLVTNYLGP RP TK
Sbjct: 68  SLANMRNLENDLKQISMAMMFAIMGLVTNYLGPNRPATK 106

[Close]

BLAST of CmaCh11G001960 vs. TrEMBL
Match: A0A0A0LSF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G013160 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.1e-46
Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 1


Query: 1   MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCA 60
           MSTQANDPRQPSA KPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCA
Sbjct: 1   MSTQANDPRQPSAVKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCA 60

Query: 61  QSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTKS 102
           QSLANMRN+ENDLKQISMAMMFAIMGLVTNYL PARPG KS
Sbjct: 61  QSLANMRNIENDLKQISMAMMFAIMGLVTNYLSPARPGAKS 101

[Close]

BLAST of CmaCh11G001960 vs. TrEMBL
Match: A0A061FWX0_THECC (UPF0139 membrane protein OS=Theobroma cacao GN=TCM_014213 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.2e-43
Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 1


Query: 2   STQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQ 61
           S   NDPRQPSAAKPFV+  V+PQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQ
Sbjct: 8   SASVNDPRQPSAAKPFVAQPVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQ 67

Query: 62  SLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTKS 102
           SLANMRN+ENDLKQISMAMMFAIMGLVTNYLGPARPGT+S
Sbjct: 68  SLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTQS 107

[Close]

BLAST of CmaCh11G001960 vs. TrEMBL
Match: A0A0D2U6A2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G197900 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.7e-42
Identity = 88/100 (88.00%), Postives = 95/100 (95.00%), Query Frame = 1


Query: 2   STQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQ 61
           ST ANDPRQPSAAKP+V+  V+PQDLPVDYSGFIAV+FGIAGVMFRYKLSSWLAIIFCAQ
Sbjct: 8   STSANDPRQPSAAKPYVAQPVSPQDLPVDYSGFIAVIFGIAGVMFRYKLSSWLAIIFCAQ 67

Query: 62  SLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTKS 102
           SLANM+N+ENDLKQISMAMMFAIMGLVTNY GPARPG +S
Sbjct: 68  SLANMKNVENDLKQISMAMMFAIMGLVTNYFGPARPGKQS 107

[Close]

BLAST of CmaCh11G001960 vs. TrEMBL
Match: A0A0B0N7V1_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_11369 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.7e-42
Identity = 88/100 (88.00%), Postives = 95/100 (95.00%), Query Frame = 1


Query: 2   STQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQ 61
           ST ANDPRQPSAAKP+V+  V+PQDLPVDYSGFIAV+FGIAGVMFRYKLSSWLAIIFCAQ
Sbjct: 8   STSANDPRQPSAAKPYVAQPVSPQDLPVDYSGFIAVIFGIAGVMFRYKLSSWLAIIFCAQ 67

Query: 62  SLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTKS 102
           SLANM+N+ENDLKQISMAMMFAIMGLVTNY GPARPG +S
Sbjct: 68  SLANMKNVENDLKQISMAMMFAIMGLVTNYFGPARPGKQS 107

[Close]

BLAST of CmaCh11G001960 vs. TrEMBL
Match: A0A067EL37_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034141mg PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 6.6e-41
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 5   ANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLA 64
           +NDPRQPSAAKP+VS AV P+DLPVDYSGFIAV+FG+AGVMFRYKL SWLAII CAQSLA
Sbjct: 7   SNDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSLA 66

Query: 65  NMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTKS 102
           NMRNME DLKQISMAMMFA+MGLVTNYLGPARPGTKS
Sbjct: 67  NMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTKS 103

[Close]

BLAST of CmaCh11G001960 vs. TAIR10
Match: AT5G07960.1 (AT5G07960.1 unknown protein)

HSP 1 Score: 164.9 bits (416), Expect = 2.7e-41
Identity = 79/99 (79.80%), Postives = 89/99 (89.90%), Query Frame = 1


Query: 2   STQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQ 61
           ++  NDPRQPSAAKP++   V P+DLPVDYSGFIAV+ G++GVMFRYK+ SWLAIIFCAQ
Sbjct: 8   ASSVNDPRQPSAAKPYIPRPVAPEDLPVDYSGFIAVILGVSGVMFRYKICSWLAIIFCAQ 67

Query: 62  SLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK 101
           SLANMRN+ENDLKQISMAMMFAIMGLVTNYLGP RP TK
Sbjct: 68  SLANMRNLENDLKQISMAMMFAIMGLVTNYLGPNRPATK 106

[Close]

BLAST of CmaCh11G001960 vs. NCBI nr
Match: gi|659106136|ref|XP_008453260.1| (PREDICTED: protein Asterix [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-46
Identity = 97/101 (96.04%), Postives = 99/101 (98.02%), Query Frame = 1


Query: 1   MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCA 60
           MSTQANDPRQPSA KPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCA
Sbjct: 1   MSTQANDPRQPSAVKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCA 60

Query: 61  QSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTKS 102
           QSLANMRN+ENDLKQISMAMMFAIMGLVTNYL PARPGTKS
Sbjct: 61  QSLANMRNVENDLKQISMAMMFAIMGLVTNYLSPARPGTKS 101

[Close]

BLAST of CmaCh11G001960 vs. NCBI nr
Match: gi|449440838|ref|XP_004138191.1| (PREDICTED: protein Asterix [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 4.4e-46
Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 1


Query: 1   MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCA 60
           MSTQANDPRQPSA KPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCA
Sbjct: 1   MSTQANDPRQPSAVKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCA 60

Query: 61  QSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTKS 102
           QSLANMRN+ENDLKQISMAMMFAIMGLVTNYL PARPG KS
Sbjct: 61  QSLANMRNIENDLKQISMAMMFAIMGLVTNYLSPARPGAKS 101

[Close]

BLAST of CmaCh11G001960 vs. NCBI nr
Match: gi|590668581|ref|XP_007037534.1| (UPF0139 membrane protein [Theobroma cacao])

HSP 1 Score: 182.2 bits (461), Expect = 4.6e-43
Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 1


Query: 2   STQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQ 61
           S   NDPRQPSAAKPFV+  V+PQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQ
Sbjct: 8   SASVNDPRQPSAAKPFVAQPVSPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQ 67

Query: 62  SLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTKS 102
           SLANMRN+ENDLKQISMAMMFAIMGLVTNYLGPARPGT+S
Sbjct: 68  SLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTQS 107

[Close]

BLAST of CmaCh11G001960 vs. NCBI nr
Match: gi|823212198|ref|XP_012438853.1| (PREDICTED: protein Asterix [Gossypium raimondii])

HSP 1 Score: 179.1 bits (453), Expect = 3.9e-42
Identity = 88/100 (88.00%), Postives = 95/100 (95.00%), Query Frame = 1


Query: 2   STQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQ 61
           ST ANDPRQPSAAKP+V+  V+PQDLPVDYSGFIAV+FGIAGVMFRYKLSSWLAIIFCAQ
Sbjct: 8   STSANDPRQPSAAKPYVAQPVSPQDLPVDYSGFIAVIFGIAGVMFRYKLSSWLAIIFCAQ 67

Query: 62  SLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTKS 102
           SLANM+N+ENDLKQISMAMMFAIMGLVTNY GPARPG +S
Sbjct: 68  SLANMKNVENDLKQISMAMMFAIMGLVTNYFGPARPGKQS 107

[Close]

BLAST of CmaCh11G001960 vs. NCBI nr
Match: gi|743926263|ref|XP_011007289.1| (PREDICTED: protein Asterix [Populus euphratica])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-41
Identity = 86/100 (86.00%), Postives = 94/100 (94.00%), Query Frame = 1


Query: 2   STQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQ 61
           S  ANDPRQPSAAKPFV+P V+PQDLPVDYSGFIAV+ G+AGVMFRYKL SWLA+IFCAQ
Sbjct: 8   SASANDPRQPSAAKPFVAPMVSPQDLPVDYSGFIAVILGVAGVMFRYKLCSWLALIFCAQ 67

Query: 62  SLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTKS 102
           SL+NMRNMENDLKQISMA MFAIMGLVTNYLGPARPG++S
Sbjct: 68  SLSNMRNMENDLKQISMASMFAIMGLVTNYLGPARPGSQS 107

The following BLAST results are available for this feature:

BLAST of CmaCh11G001960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ASTER_ARATH	4.7e-40	79.80	Protein Asterix OS=Arabidopsis thaliana GN=At5g07960 PE=3 SV=1	[more]

BLAST of CmaCh11G001960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSF0_CUCSA	3.1e-46	95.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G013160 PE=4 SV=1	[more]
A0A061FWX0_THECC	3.2e-43	91.00	UPF0139 membrane protein OS=Theobroma cacao GN=TCM_014213 PE=4 SV=1	[more]
A0A0D2U6A2_GOSRA	2.7e-42	88.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G197900 PE=4 SV=1	[more]
A0A0B0N7V1_GOSAR	2.7e-42	88.00	Uncharacterized protein OS=Gossypium arboreum GN=F383_11369 PE=4 SV=1	[more]
A0A067EL37_CITSI	6.6e-41	88.66	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034141mg PE=4 SV=1	[more]

BLAST of CmaCh11G001960 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07960.1	2.7e-41	79.80	unknown protein	[more]

BLAST of CmaCh11G001960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659106136\|ref\|XP_008453260.1\|	1.2e-46	96.04	PREDICTED: protein Asterix [Cucumis melo]	[more]
gi\|449440838\|ref\|XP_004138191.1\|	4.4e-46	95.05	PREDICTED: protein Asterix [Cucumis sativus]	[more]
gi\|590668581\|ref\|XP_007037534.1\|	4.6e-43	91.00	UPF0139 membrane protein [Theobroma cacao]	[more]
gi\|823212198\|ref\|XP_012438853.1\|	3.9e-42	88.00	PREDICTED: protein Asterix [Gossypium raimondii]	[more]
gi\|743926263\|ref\|XP_011007289.1\|	1.1e-41	86.00	PREDICTED: protein Asterix [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005351	UPF0139

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G001960.1	CmaCh11G001960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005351	Uncharacterised protein family UPF0139	PRODOM	PD073147		coord: 6..81 score: 1.0
IPR005351	Uncharacterised protein family UPF0139	PANTHER	PTHR13193	CGI-140	coord: 2..99 score: 4.7
IPR005351	Uncharacterised protein family UPF0139	PFAM	PF03669	UPF0139	coord: 5..98 score: 4.1
None	No IPR available	PANTHER	PTHR13193:SF0	PROTEIN ASTERIX	coord: 2..99 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh11G001960	Cucsa.198150	Cucumber (Gy14) v1	cgycmaB0577
CmaCh11G001960	Cla019067	Watermelon (97103) v1	cmawmB143
CmaCh11G001960	Csa1G013160	Cucumber (Chinese Long) v2	cmacuB087
CmaCh11G001960	MELO3C017217	Melon (DHL92) v3.5.1	cmameB120
CmaCh11G001960	ClCG06G015720	Watermelon (Charleston Gray)	cmawcgB135
CmaCh11G001960	CSPI01G02770	Wild cucumber (PI 183967)	cmacpiB086
CmaCh11G001960	CmoCh11G002030	Cucurbita moschata (Rifu)	cmacmoB112
CmaCh11G001960	CmoCh10G002400	Cucurbita moschata (Rifu)	cmacmoB104
CmaCh11G001960	Cp4.1LG18g07660	Cucurbita pepo (Zucchini)	cmacpeB135
CmaCh11G001960	Cp4.1LG04g14740	Cucurbita pepo (Zucchini)	cmacpeB153
CmaCh11G001960	MELO3C017217.2	Melon (DHL92) v3.6.1	cmamedB128
CmaCh11G001960	CsaV3_1G002810	Cucumber (Chinese Long) v3	cmacucB0101
CmaCh11G001960	Cla97C06G125260	Watermelon (97103) v2	cmawmbB139
CmaCh11G001960	CsGy1G002790	Cucumber (Gy14) v2	cgybcmaB029
CmaCh11G001960	Carg09210	Silver-seed gourd	carcmaB0830
CmaCh11G001960	Carg17930	Silver-seed gourd	carcmaB0643

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh11G001960	CmaCh10G002280	Cucurbita maxima (Rimu)	cmacmaB076

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G001960	Watermelon (97103) v2	cmawmbB122
CmaCh11G001960	Wax gourd	cmawgoB0138
CmaCh11G001960	Wax gourd	cmawgoB0143
CmaCh11G001960	Cucurbita maxima (Rimu)	cmacmaB127
CmaCh11G001960	Cucumber (Gy14) v1	cgycmaB0260
CmaCh11G001960	Cucumber (Gy14) v1	cgycmaB0790
CmaCh11G001960	Cucurbita moschata (Rifu)	cmacmoB125
CmaCh11G001960	Wild cucumber (PI 183967)	cmacpiB087
CmaCh11G001960	Wild cucumber (PI 183967)	cmacpiB133
CmaCh11G001960	Cucumber (Chinese Long) v2	cmacuB088
CmaCh11G001960	Cucumber (Chinese Long) v2	cmacuB136
CmaCh11G001960	Melon (DHL92) v3.5.1	cmameB083
CmaCh11G001960	Melon (DHL92) v3.5.1	cmameB090
CmaCh11G001960	Watermelon (Charleston Gray)	cmawcgB119
CmaCh11G001960	Watermelon (Charleston Gray)	cmawcgB124
CmaCh11G001960	Watermelon (97103) v1	cmawmB112
CmaCh11G001960	Watermelon (97103) v1	cmawmB120
CmaCh11G001960	Cucurbita pepo (Zucchini)	cmacpeB105
CmaCh11G001960	Cucurbita pepo (Zucchini)	cmacpeB139
CmaCh11G001960	Bottle gourd (USVL1VR-Ls)	cmalsiB106
CmaCh11G001960	Bottle gourd (USVL1VR-Ls)	cmalsiB123
CmaCh11G001960	Bottle gourd (USVL1VR-Ls)	cmalsiB143
CmaCh11G001960	Cucumber (Gy14) v2	cgybcmaB030
CmaCh11G001960	Cucumber (Gy14) v2	cgybcmaB585
CmaCh11G001960	Melon (DHL92) v3.6.1	cmamedB090
CmaCh11G001960	Melon (DHL92) v3.6.1	cmamedB098
CmaCh11G001960	Silver-seed gourd	carcmaB0538
CmaCh11G001960	Cucumber (Chinese Long) v3	cmacucB0102
CmaCh11G001960	Cucumber (Chinese Long) v3	cmacucB0155