CmaCh10G011610 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh10G011610
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_219
LocationCma_Chr10 : 8258271 .. 8265734 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCAATGGATCGGATTTCACCCGAGGCCAGGCTTCTACATGCAGGTATGAACGATCTATTTGATTTTAAATGGTTAAAGACATGCTCGTAAAAGTTTGATTATATAAACGATACGATTTTGATCGTTTTAGGAGGCATTTCATTATGTTTCCACCAACCATTTTGGACAAACACTTTGAGAGATTGATAAGATTTGATGAGAGATTGTTCATGTTAAGCCAAAGACCGTATCCAACCTTCAATGTCCCTTACTTTCATTCAAAACAATTTTTACAAACGGCTCTTCAAACCCTCATTACAATGTCTTCAACACATCAGATTCAAATGCTCCAACCTGCTGATGCTGCTCCCAGCTCACCATGTCCAGGTATTTACTTCGATATTTTGAGTTGGTTAGGTTAGTGACTCAAACAACCCAAATAGAGTTTACAATCCAATCCAACCCATCCTAATTTTGTATTTTCGGGTTGGGTTGAGTTACCCAAAGACCCTTGTCTCAAAAAGTAAAAACATTGTCAATGGTACCTATATGAAAAATGACCCGAAAATGGCTTGAAAACTAAATTATTTAAGGATGGTTAAAAATAACTTAGTTTTTTTACCTAATGATTTAAGTGTCTAACTGGCCTGAAAACTAAATTATTTAAGGATGGTTAAAAATAACTTAGTTTTTTTACCTAATGATTTAAGTGTCAACTTCTCCCTACCCGATAGTTATATGTAGTAAGTCGTTGTTGTCTTTTTCTTATATTCCCAACACCAATTTCACTTTCTCAAATCTTACTTTCAAAACTCTCTTTTGAAATCTCTCTGTCCCCGTTTTCTAAAAACTTCTTGAACTGGGTCAGAGGCTTCAGCATACGTCGCTTGGTTATAAGCGACACAAGAACGAATAGGCTTAACTCACTTATTGCTGAGAAGCGAGTGTCGCACAACCGCAAGTCCCCAGCCATCAAAGTGCGATTTCTAAGAAGGTCTTAGATTGTTAGGGATTGTAAGTTGTTTTTTTTTTAAAATTATTTAAAAAAAATCTTACTTATTTACCGTTCATTATATTAATAGCTAAAATCATGTAAAAATCAAATATCAAACACATCGTTAATACATGTTACAAAAGTTGAATAGTATTAATTTTCATTACAATCTTAAAAGTAGGGTTGAGTTGAGTTTGTAACTCTATTTTTGAGTTAGTCGGGTTGACCTGACCGAAAAAAATATCAACTCGTGACCATACCCGTTTTATAAATTTTGGTTTCATGTTATTGCAATAATTTGATGTTGTTTGAGCTTTTTTTTGTTTTTTCTCTGATGTAAGGAATTCCAAAATTTCAAGTAGGAGAGTTCCAAATACATATTCAGATTCAAATGGTACTCAAATGGTTGCATAAGCTTACGGAATGTATCCTAATGGAATTTCAAAATAACCAATCGAATTCTCAAGAAAGTCCAATTAATTACTTCCAAATTTGGAAGTGTATCATCCGTTTCTAAGATAGAATTTTATTTATTTTTCGATCTAGTTCCATTAGTACATGTAACTATTTCAAATCATTTATAAATAAACTCTAGTAGTTGGGGAGTTTTACATCTCAATGTCTCCAGGTATATTTCTCGTTGCATATTCTTTCTTTTGTTCTTCATGTTCTTCATCTAGATTGACTTTGTGAGTTGTGCAATCCTAAAAAATGGTATTAAGGAGGGATTGGATGGCTTAAGTTGTTACAAAATTGTAACATTCTACATTAGTTGGAGGGGAACATTCTTTATAAGGACATGCATACATGGTTTAAAATCACATTAGTTGGAGAGGAACATTCAATTAAGACCAAAGAAGACAATATCTATTAGCGATGGCTTGAGTTGTTACAAAAATATCTATTAGCGATGGCTTAAGTTGTTACAAAATTGTAACATTCTACCTTAGTTGGAGGGGAACATTCTTTATAAGGACATGCATACATGGTTTAAAATCACATTAGTTGGAGAGGAACATTCAATTAAGACCAAAGAGACCAATATCTATTAGCGATGGCTTGAGTTGTTACAAAAATATCTATTAGCGATGGCTTAAGTTGTTACAAAATTGTAACATTCTACCTTAGTTGGAGGGGAACATTCTTTATAAGGACATGCATACATGGTTTAAAATCATATTAGTTGGAGAGGAACATTCAATTAAGACCAAAGAGACAATATCTATTAGCGATGGCTTGAGTTGTTACAAAAATATCTATTAGCGATGGCTTAAGTTGTTACAAAATTGTAACATTCTACATTAGTTGGAGGTGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCTTTACATACGTGGTTTAAAACCTTGAGGGGAAGCTTGGAAGGGAAAGCCCAAAGAGAACACAGTGGGCTTGTGCTCTTACAAGTGGTATCACCAAATAGTGTGCCAACGAGAACGCTAGTCCCCAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGGAGAGAGGAATAAAATATTTTTCGTGAGGGTGTAGAAACCTCTCCCTAACAGTGTGGTTTAAAACTTAAGGGGAACCCAGAAAGGAAAAGTCTAAAGAGACAGTATTTGCTAGCAGTTGGCTTTGGTTGTTACAATGTGCATCTCAGATATCTCAGAGGTCACTCCGTAACTTTTCAATTAGCGATGGAGTTGAGTTGTTATAATGTACCATTCAAATATCTTAGAAGTCACTTCACAACTTTCCAATGTTTTTCCCTAAAAATCTCTTCCTAATAGACGTCTTTTCAAACCTTAAGAGGAACCCAGGAAGAAAAAGTCCAAAGAGAACAAGATTTGCTAGCGGTGGGCTTGAGTTGTTAGCAAAATAACTCTAAGATATCTTAGAAGCCACTTCATAATTTTCCAATGTTTGCTCTTGATTTGCCATGTACCTTCTAACAATTTCCACTACATGTGTTATATCTGATCGAGTGCACACCATATCATACATCAAGCTTCCAACTACATAACCATATGGAATTGAGGTCATGTGCTTATGCTCCTCAACTATTTTTCGGAGATTTTCCTTTTGACAATTCAACTTGATGCTTCCAAATGGGTAGTCATGGGATTCTCAATATGCATCTCCTAAGATAGATTTAATGTTCTAACTGATCTACTCGTGAAATTTTCATCCAAGAATCTGTTTTATTGCACCCAAATCTTTATCTCTTCATCCATGGCTTACTACCACTTGGTTGAATTCTCCACCTATAGGGCCTCATCAAGGGACTCTTGTCTCCCTTCATCAGCCAGAAACAAATAGTATAATAAAGGTGAATATCTAACTGGTACTTTATTGGTTTCGGATGATCTCCTCAGCATCTGCTCATGTATCACTTGTTCTACCTCTAGTCACTCAATAATAGTCTCAAGAGTTTTTTTCAATTTTTGTTGTAGCATAATTATGTGAATTTTTTTGTAACTCAACCTCAACTCCAACTTGATTAGTAGTCTGTGAATCTTTTTTCTCTTTGTCATTGTACGAGACATCTTCATCAAATGTCGTGTCATAATGTCTTAGGATTGTTTTTTCATCCCAAATTTGTACTCAAACATGTTAAAACCATAGCCTATGAAGTAGCACTTTGTAGACTTAACATCTCTCTTCTCTAGATCAACATGATCATATGTAGTGCAGCTAAAAGTTCTCAAGTGATAATACTTGAATTCTTTTCCTATCTATACCTCTTCTAGCAACTTGAACTCCAGAGTAATGATAGCTCTATTGATCAAGTAAGTTGTTATATTTACAGCAGCAACCCATAATGTCTTTACCAATCGAGAATGAATCCTCATATTTCTTGCACACTCATCCAATATTCTATTAATCTTTTCAATGTTCTATCACTTGAGGGTGGCAAACACGTCTGATTTGTGTTTCAAGAAATAAACTCATACATTCCTGTTGAAATCATCAATGAAGTTGATATAAAACTCTGATCCACCAAGTAATGAAACTAGAGATGATCCCTAAACATATGTACAATTTATTTGAAACTCTATTTTCTTCACTTATGTGGCAACCTTTGTGAAGCTAACTTGTTTCTGTTTGTCCAGAATGAAACTCTAAAAAAAACAAAAAATTCATATCTAAAGATTTCATACCTTCTAAAGCTCCTTTCATAACCAAAATTTTCATTCTTTTAATTTTCATAGATTCATGTCTTTTGTGTCATAGGTTTAAACTTGAAACACTCTCATCAACAGTAGTCATGTTTATACACCCTATAATTGTGTATAAGATTTTCGATTTTGTATCATGTGCTAGTACCATAGCACCCTTCTATATCTTGCCCTAACCATTAATAATGAATTGGATTGAATTTTATGGTAAAAAGGTCCTGCCCTATAAATGATTAGTGCCATCCTAGTAGGCCAGCACATGGATTGCACTCACATGATTATAATTGTACTGGGATTAGTACCATAGATATGATTAGTTCCAACAAGTTATTACGTGTGCACTGTTTAGAAGATTTCTAATGATCATATAGGAGTAAACCTAATCTTAAGGATAGAGGTCATCATATCAAAATAGTTTGTCTTCATATATTCATATGATTATAACTATATGAAGACTACTAGTGAGTCGTCGATTAATCCTCAGTAGTGAACTGTTATATGTGACTAGACCTGTTTAGAGTTGGATTGTTAAGGAGATCGTTGTCTAACCTATTTAGAGGAGCTAGATGATGGAAACTCAATTATTGAGATACACTCTAATTGAGATAAGCTCGAAGTAGGGAATGAAAAATCATATCATAAGTTAAAATGGGTTCTTTTAGTCTTAAACTCATAAGGATTATGATTGATGAAATAGACTATAGATAAAAATTAATGCAAAGCCCGATATAATAATAAAAGTTATTTTTTTACTAAAATATTTCTCATTCCTTTCTTGGTCCCTTAAAAATTGTTAAAATTGTGATAAAATTAATGTGAACACGTCCATGTACCACTCAAATGCTACATCATACTTGAGATCCAAACATTTAGAGATTCGTTCTTTTAATAGAGATTTATTTGAGTTAGTTAGAAACGTTGTACAAAATTTTTATATATACAAAGGGGATGTAGCTCAAATGGTAGAGCGCTTGCTTTGCTGTGAGAAGTACAAGGATCGATACCCTGCATCTCCAATAAAGTTAATCTACTTTTAATCGATTCTTTGAATCGTGGACTATTTGTCTAATGACATGTTTTTCAATGTTCTTTTAAAAGATGTACATAAGTATGTTTGAAAAGGTGAATTAATTTTCTTATGGATGTCACAAATATGATGTCATAGAACTCCATTGGTAGAGTTCGACTTCAAGAAGTTAAATTAAGTTAGCACTTGAGTGTTGTATGAATGATACGTAACTTGTGACCTATCTGCCTATTATTTTCTGATTTTATGTATGTTATGATTATGTTATGTTGATGAATGTTATGTGATGCATGTACTTCCATTATGGCAATCCATGTATGTATGATACTATGTTCCCGATTATGTCTATGAGATATTGATGAGCCATGTATGATAATTAAAGATATGCTATGGACACATATGCATGTCCCATAGAAAAATTATGTGATGAGAATAATGGAAGTATGATGAATATCATAACTACGTGTCATGATTTGAAATTGAAGGACTTCATGCATATTGTAGATCACGAGCACAGTATACTTTCCTATTATATTTTGTACAGACGTGTACACTATGATATGATACACATTCCTTTCTTTTTGTTGGTTTTCAACAGTGTGAACGTGCACTAGTGCATAGTAAGCCTATGAGATATGTATATGAGCCCTCCTAAAAAGTATGTACATGAGTCCATGTGAACCTTGCATAGAAAAGTATTGATCATCTAATCCTACTAAAAAAAATGTAGAGCCTAAGGAATAGTTATAGAAATATAGGTCATATCATGAACTATGATGGCTTGTGATTGCATTTTTCTACTCCATTACTTACGGATTATTTTTAAATACCTAAACAACATTTACTATTTTTCTGGATAAAGTCAAGACTCGCTCGCCAGCATGACGGTATCTATTGTTGTGCAGTCACAGATGGAATCGTTTGAGAGCGTCATTTCATCTTTGTATTTTTTTTTTATATGTATCACAAATCCAATTTCTAGTCTATAATAATTTAAATAGCGTCATTGTATAATTCGATTTTATCTTGAATTTAATTGTGGTGATACTTCATCTTGGAAGTCGTGGAAGTCGAGGTAACTTGGTGGCGAAGTTCTATTTTGCAAAGAGGATGCTAGTGTGGGAGATTTTGGGAAATGGGTTGAAAGAAAAAGTTGAAATTGAATGGTCAAATATTACATGACTCCAAGCTTTCATGGAAGAAACCAAACGAGGAATCTTGGAAGTCGAGGTAATTACTCTAGACCTTTGCTTTTTTTAGCTTTTCCTTTCGAGCTTTCCTTAAAATTTTTTAAACATAAAGAGAGATTTCCACACTTTTAGAATGAATGTTTCGTTCTCGTCTCCAACTAATGTGGGATCTCACAATCCTCCCCCTTGAGAGTCGAGCGTCTTCGCTGGCACACCGCCCAATGTCTGGCTCTAATACCATTTGTAACTGCTCAAGCCCACCACTAACATATATTGTCCTCTTTGGGCTTTCCCTTTTGAGCTTCTTCTCAAGATTTTTAAAACGCGTCTATTAGGGAGAGGTTTCCACACCTTTATAAAGAATGCTTCGCTCCCCTCTCCAACCGATGTGGTATCTCACAATCTACCCCTTGAGGGCCAGCATCCTCGATGGCACTTCGTCTGATGTCGGGCTATGATACCATTTGTAACAACCTAAGCCCACTGGCTAGCAGATATTTCCTCTTTGGTATCTCGTCTATAAGAGATAGATTTCCACATCTTTATAAGAAATGCTTTGTTCCCCTCTCCAACTAATGTGGGATCTCACAATCACGTCTACCATTGACTTGCAATCTGAAATTATTTTTCAGTTTTAAGAGATTCATCCTTATTATCTGTCATCTTACAACCACGGTCAAGACACCATGTAAACTCTATGACATTGACTCAGAGCACTACATGTAGTTACTCGAATTTTCATAGTTATTTGATTATGAGACGGGTTGTTTACGATTTACCCCGTTTTTTCTTTTTTGGGGTTTTTTCAGCTACACCAGCCGCCAAAATTTTACAAAGCGATCGAACCCGAGCCACGAAAACACACACAATGGACCGATGGATTGGATTTTACAGAAGGCCAAGCTTATATAAACAGGTTTAGTTCGTTTTGGTGATCAAATGAGATGAATTAATGATCAAGAGATCTATAAAGTCAACATATTTATGTTGTTGTCCTAAACTTTTAGGAGGCATTGCATTGCGTTTCCTCCAAGAGTGTTGGACAAACACTATCAGAAACTAAAAGATAAGGATGAGTGTTTGTTCGAGCTGAGCTGA

mRNA sequence

ATGGGTCAATGGATCGGATTTCACCCGAGGCCAGGCTTCTACATGCAGCTACACCAGCCGCCAAAATTTTACAAAGCGATCGAACCCGAGCCACGAAAACACACACAATGGACCGATGGATTGGATTTTACAGAAGGCCAAGCTTATATAAACAGGAGGCATTGCATTGCGTTTCCTCCAAGAGTGTTGGACAAACACTATCAGAAACTAAAAGATAAGGATGAGTGTTTGTTCGAGCTGAGCTGA

Coding sequence (CDS)

ATGGGTCAATGGATCGGATTTCACCCGAGGCCAGGCTTCTACATGCAGCTACACCAGCCGCCAAAATTTTACAAAGCGATCGAACCCGAGCCACGAAAACACACACAATGGACCGATGGATTGGATTTTACAGAAGGCCAAGCTTATATAAACAGGAGGCATTGCATTGCGTTTCCTCCAAGAGTGTTGGACAAACACTATCAGAAACTAAAAGATAAGGATGAGTGTTTGTTCGAGCTGAGCTGA

Protein sequence

MGQWIGFHPRPGFYMQLHQPPKFYKAIEPEPRKHTQWTDGLDFTEGQAYINRRHCIAFPPRVLDKHYQKLKDKDECLFELS
Homology
[Close]
BLAST of CmaCh10G011610 vs. TrEMBL
Match: A0A0A0M1F5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G561420 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-27
Identity = 57/73 (78.08%), Postives = 65/73 (89.04%), Query Frame = 1 

Query: 10  RPGFY-MQLHQPPKFYKAIEPEPRKHTQWTDGLDFTEGQAYINRRHCIAFPPRVLDKHYQ 69
           +PG   ++L+ PPKFYK IEPEPRKHTQWTDG DFTEGQAY+NRRHCI FPP+VLDKHY+
Sbjct: 172 KPGILEVELNHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYE 231

Query: 70  KLKDKDECLFELS 82
           KLKDKD+ LFELS
Sbjct: 232 KLKDKDKHLFELS 244

[Close]
BLAST of CmaCh10G011610 vs. TrEMBL
Match: A0A022RAG3_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a005144mg PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-13
Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 1 

Query: 15  MQLHQPPKFYKAIEPEPRKHTQWTDGLDFTEGQAYINRRHCIAFPPRVLDKHYQKLKDKD 74
           ++L+ PP +Y+ I P+PRKHT W    DFT GQA I RRH + FP  +LDKHY+KL   D
Sbjct: 197 IELNNPPLYYREINPQPRKHTLWQQSSDFTGGQAPIWRRHYVKFPAGILDKHYEKLLQCD 256

Query: 75  ECLFELS 82
           E LF LS
Sbjct: 257 ERLFALS 263

[Close]
BLAST of CmaCh10G011610 vs. TrEMBL
Match: A0A068VCF8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00011809001 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.7e-13
Identity = 38/67 (56.72%), Postives = 45/67 (67.16%), Query Frame = 1 

Query: 15  MQLHQPPKFYKAIEPEPRKHTQWTDGLDFTEGQAYINRRHCIAFPPRVLDKHYQKLKDKD 74
           ++LHQPP F+K   P+PRKHT W    DFT GQA I RRH + F P +LDKHY+KLK  D
Sbjct: 109 VELHQPPTFFKETNPQPRKHTLWQQASDFTGGQAPICRRHRVKFAPGMLDKHYEKLKQCD 168

Query: 75  ECLFELS 82
             L  LS
Sbjct: 169 PRLQVLS 175

[Close]
BLAST of CmaCh10G011610 vs. TrEMBL
Match: K4B178_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.6e-13
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 1 

Query: 15  MQLHQPPKFYKAIEPEPRKHTQWTDGLDFTEGQAYINRRHCIAFPPRVLDKHYQKLKDKD 74
           ++L++PP F++   P+PRKHT W    DFT GQA I+RRHC+ F P VLDKHY+KL   D
Sbjct: 206 IELNEPPTFHRESNPQPRKHTLWHQTSDFTGGQAPIHRRHCVRFAPGVLDKHYEKLLRCD 265

Query: 75  ECLFELS 82
             L ELS
Sbjct: 266 ARLNELS 272

[Close]
BLAST of CmaCh10G011610 vs. TrEMBL
Match: A0A124SEA9_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_022275 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.7e-13
Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 1 

Query: 7   FHPRPGFY-MQLHQPPKFYKAIEPEPRKHTQWTDGLDFTEGQAYINRRHCIAFPPRVLDK 66
           +  +PG   ++L+Q P+F + I P+PRKHTQW    DFT+ QA I RRH I FPP VLDK
Sbjct: 116 YEAQPGLLEIELNQQPQFGREINPQPRKHTQWKQTTDFTQAQASICRRHSIIFPPGVLDK 175

Query: 67  HYQKLKDKDECLFELS 82
            Y+KL   D  LF LS
Sbjct: 176 QYEKLLQCDHRLFGLS 191

[Close]
BLAST of CmaCh10G011610 vs. TAIR10
Match: AT2G24100.1 (AT2G24100.1 unknown protein)

HSP 1 Score: 68.9 bits (167), Expect = 1.6e-12
Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 1 

Query: 17  LHQPPKFYKAIEPEPRKHTQWTDGLDFTEGQAYINRRHCIAFPPRVLDKHYQKLKDKDEC 76
           L + P F++   P+PRKHT W    DFT+GQA +NR+H +  PP +++KH++KL   D  
Sbjct: 184 LARRPLFFRETNPQPRKHTLWQATSDFTDGQASMNRQHFLQCPPGIMNKHFEKLVQCDHR 243

Query: 77  LFELS 82
           LF LS
Sbjct: 244 LFCLS 248

[Close]
BLAST of CmaCh10G011610 vs. TAIR10
Match: AT4G30780.1 (AT4G30780.1 unknown protein)

HSP 1 Score: 64.7 bits (156), Expect = 3.0e-11
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 1 

Query: 17  LHQPPKFYKAIEPEPRKHTQWTDGLDFTEGQAYINRRHCIAFPPRVLDKHYQKLKDKDEC 76
           L + P F++   P+PRKHT W    DFT+GQA +NR+H +     +++KH++KL   D  
Sbjct: 211 LARQPLFFRETNPQPRKHTLWQATSDFTDGQASMNRQHFLQCAQGIMNKHFEKLVQCDHR 270

Query: 77  LFELS 82
           LF LS
Sbjct: 271 LFHLS 275

[Close]
BLAST of CmaCh10G011610 vs. NCBI nr
Match: gi|700210915|gb|KGN66011.1| (hypothetical protein Csa_1G561420 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-27
Identity = 57/73 (78.08%), Postives = 65/73 (89.04%), Query Frame = 1 

Query: 10  RPGFY-MQLHQPPKFYKAIEPEPRKHTQWTDGLDFTEGQAYINRRHCIAFPPRVLDKHYQ 69
           +PG   ++L+ PPKFYK IEPEPRKHTQWTDG DFTEGQAY+NRRHCI FPP+VLDKHY+
Sbjct: 172 KPGILEVELNHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYE 231

Query: 70  KLKDKDECLFELS 82
           KLKDKD+ LFELS
Sbjct: 232 KLKDKDKHLFELS 244

[Close]
BLAST of CmaCh10G011610 vs. NCBI nr
Match: gi|659099332|ref|XP_008450546.1| (PREDICTED: uncharacterized protein LOC103492114 isoform X1 [Cucumis melo])

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-27
Identity = 57/73 (78.08%), Postives = 65/73 (89.04%), Query Frame = 1 

Query: 10  RPGFY-MQLHQPPKFYKAIEPEPRKHTQWTDGLDFTEGQAYINRRHCIAFPPRVLDKHYQ 69
           +PG   ++L+ PPKFYK IEPEPRKHTQWTDG DFTEGQAY+NRRHCI FPP+VLDKHY+
Sbjct: 172 KPGILEVELNHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYE 231

Query: 70  KLKDKDECLFELS 82
           KLKDKD+ LFELS
Sbjct: 232 KLKDKDKHLFELS 244

[Close]
BLAST of CmaCh10G011610 vs. NCBI nr
Match: gi|659099334|ref|XP_008450547.1| (PREDICTED: uncharacterized protein LOC103492114 isoform X2 [Cucumis melo])

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-25
Identity = 56/73 (76.71%), Postives = 64/73 (87.67%), Query Frame = 1 

Query: 10  RPGFY-MQLHQPPKFYKAIEPEPRKHTQWTDGLDFTEGQAYINRRHCIAFPPRVLDKHYQ 69
           +PG   ++L+ PPKFYK IEPEPRKHTQWTDG DFTEGQAY+N RHCI FPP+VLDKHY+
Sbjct: 172 KPGILEVELNHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVN-RHCIVFPPKVLDKHYE 231

Query: 70  KLKDKDECLFELS 82
           KLKDKD+ LFELS
Sbjct: 232 KLKDKDKHLFELS 243

[Close]
BLAST of CmaCh10G011610 vs. NCBI nr
Match: gi|747080461|ref|XP_011087482.1| (PREDICTED: uncharacterized protein LOC105168950 isoform X1 [Sesamum indicum])

HSP 1 Score: 86.7 bits (213), Expect = 2.1e-14
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 1 

Query: 15  MQLHQPPKFYKAIEPEPRKHTQWTDGLDFTEGQAYINRRHCIAFPPRVLDKHYQKLKDKD 74
           ++L+QPP FY+   P+PRKHT W    DFT GQA I RRH ++FPP +LDKHY+KL   D
Sbjct: 188 IELNQPPLFYRETNPQPRKHTLWQQASDFTGGQAPIWRRHYVSFPPGILDKHYEKLLQCD 247

Query: 75  ECLFELS 82
           + LF LS
Sbjct: 248 QRLFALS 254

[Close]
BLAST of CmaCh10G011610 vs. NCBI nr
Match: gi|747080463|ref|XP_011087483.1| (PREDICTED: uncharacterized protein LOC105168950 isoform X2 [Sesamum indicum])

HSP 1 Score: 86.7 bits (213), Expect = 2.1e-14
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 1 

Query: 15  MQLHQPPKFYKAIEPEPRKHTQWTDGLDFTEGQAYINRRHCIAFPPRVLDKHYQKLKDKD 74
           ++L+QPP FY+   P+PRKHT W    DFT GQA I RRH ++FPP +LDKHY+KL   D
Sbjct: 188 IELNQPPLFYRETNPQPRKHTLWQQASDFTGGQAPIWRRHYVSFPPGILDKHYEKLLQCD 247

Query: 75  ECLFELS 82
           + LF LS
Sbjct: 248 QRLFALS 254

The following BLAST results are available for this feature:
BLAST of CmaCh10G011610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh10G011610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M1F5_CUCSA1.5e-2778.08Uncharacterized protein OS=Cucumis sativus GN=Csa_1G561420 PE=4 SV=1[more]
A0A022RAG3_ERYGU2.1e-1355.22Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a005144mg PE=4 SV=1[more]
A0A068VCF8_COFCA2.7e-1356.72Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00011809001 PE=4 SV=1[more]
K4B178_SOLLC3.6e-1355.22Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
A0A124SEA9_CYNCS4.7e-1352.63Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_022275 PE=4 ... [more]
BLAST of CmaCh10G011610 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G24100.11.6e-1246.15 unknown protein[more]
AT4G30780.13.0e-1143.08 unknown protein[more]
BLAST of CmaCh10G011610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210915|gb|KGN66011.1|2.2e-2778.08hypothetical protein Csa_1G561420 [Cucumis sativus][more]
gi|659099332|ref|XP_008450546.1|2.2e-2778.08PREDICTED: uncharacterized protein LOC103492114 isoform X1 [Cucumis melo][more]
gi|659099334|ref|XP_008450547.1|1.5e-2576.71PREDICTED: uncharacterized protein LOC103492114 isoform X2 [Cucumis melo][more]
gi|747080461|ref|XP_011087482.1|2.1e-1456.72PREDICTED: uncharacterized protein LOC105168950 isoform X1 [Sesamum indicum][more]
gi|747080463|ref|XP_011087483.1|2.1e-1456.72PREDICTED: uncharacterized protein LOC105168950 isoform X2 [Sesamum indicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh10G011610.1CmaCh10G011610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33494FAMILY NOT NAMEDcoord: 17..81
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh10G011610Lsi06G000560Bottle gourd (USVL1VR-Ls)cmalsiB076
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh10G011610Watermelon (97103) v2cmawmbB061
CmaCh10G011610Wax gourdcmawgoB0079
CmaCh10G011610Wax gourdcmawgoB0090
CmaCh10G011610Cucurbita maxima (Rimu)cmacmaB085
CmaCh10G011610Cucumber (Gy14) v1cgycmaB0176
CmaCh10G011610Cucurbita moschata (Rifu)cmacmoB067
CmaCh10G011610Cucurbita moschata (Rifu)cmacmoB079
CmaCh10G011610Cucumber (Chinese Long) v2cmacuB074
CmaCh10G011610Melon (DHL92) v3.5.1cmameB068
CmaCh10G011610Watermelon (Charleston Gray)cmawcgB053
CmaCh10G011610Watermelon (Charleston Gray)cmawcgB055
CmaCh10G011610Watermelon (97103) v1cmawmB047
CmaCh10G011610Cucurbita pepo (Zucchini)cmacpeB081
CmaCh10G011610Cucurbita pepo (Zucchini)cmacpeB097
CmaCh10G011610Cucumber (Gy14) v2cgybcmaB016
CmaCh10G011610Melon (DHL92) v3.6.1cmamedB071