CmaCh10G003610 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh10G003610
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transmembrane-like protein
Location	Cma_Chr10 : 1666881 .. 1667461 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCACTCCACCTTGCTCGTAGTCAAAAACAGCCGGAGAGCTTTCTCTTCGCTTCTAAAATCAAAAGTCCACCGTCGTCTCCTCCTCCGCCGTCTTCCCCAAATCCGATACTCTTTCTCTGCATATCGAAGCTTCAACACCTTATTCTTTTTTCAGCTCTTGATCTCCGGTATTACAGATAAAGATGGCGTACGTGGACCATGCGTTTTCGATAGCAGACGAGGACATTGTTATGGATTCTCCGTTCCCCGTCAACAATCGACCTCCTATCAAGGAGATCGCTCTTGCTGTTTCTCTTCTCGTTTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCTAGCAATCGAGTCGGTGGTGATCGTGCTCACGGTACTTTTTTTTTTTTTGCCTTCCTTGTTGTTGGTTTTGCCCTAGTTCGAATGCAAATTTATGGTTCATTCTCGAAAACTTTCAGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCTTGTTCATTCCAGGGTTCTACTACACGCGGATTGCCTACTATGCTTACAAGGGCTACAAGGGCTTCTCCTTTTCCAACATTCCCCCTGTCTAA

mRNA sequence

CCTCACTCCACCTTGCTCGTAGTCAAAAACAGCCGGAGAGCTTTCTCTTCGCTTCTAAAATCAAAAGTCCACCGTCGTCTCCTCCTCCGCCGTCTTCCCCAAATCCGATACTCTTTCTCTGCATATCGAAGCTTCAACACCTTATTCTTTTTTCAGCTCTTGATCTCCGGTATTACAGATAAAGATGGCGTACGTGGACCATGCGTTTTCGATAGCAGACGAGGACATTGTTATGGATTCTCCGTTCCCCGTCAACAATCGACCTCCTATCAAGGAGATCGCTCTTGCTGTTTCTCTTCTCGTTTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCTAGCAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCTTGTTCATTCCAGGGTTCTACTACACGCGGATTGCCTACTATGCTTACAAGGGCTACAAGGGCTTCTCCTTTTCCAACATTCCCCCTGTCTAA

Coding sequence (CDS)

ATGGCGTACGTGGACCATGCGTTTTCGATAGCAGACGAGGACATTGTTATGGATTCTCCGTTCCCCGTCAACAATCGACCTCCTATCAAGGAGATCGCTCTTGCTGTTTCTCTTCTCGTTTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCTAGCAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCTTGTTCATTCCAGGGTTCTACTACACGCGGATTGCCTACTATGCTTACAAGGGCTACAAGGGCTTCTCCTTTTCCAACATTCCCCCTGTCTAA

Protein sequence

MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV

Homology

[Close]

BLAST of CmaCh10G003610 vs. Swiss-Prot
Match: TM230_CHICK (Transmembrane protein 230 OS=Gallus gallus GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.0e-10
Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 1


Query: 28  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALAV L + G   I++GA + +  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALAVVLFMIGTFLIIIGALLLAGYISKGGTDRAIPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of CmaCh10G003610 vs. Swiss-Prot
Match: TM230_PONAB (Transmembrane protein 230 OS=Pongo abelii GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.0e-10
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 1


Query: 28  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATGLFLIGAFLIIIGSLLLSGYISKGGADRAIPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of CmaCh10G003610 vs. Swiss-Prot
Match: TM230_HUMAN (Transmembrane protein 230 OS=Homo sapiens GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 1


Query: 28  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGAFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of CmaCh10G003610 vs. Swiss-Prot
Match: TM230_MOUSE (Transmembrane protein 230 OS=Mus musculus GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 1


Query: 28  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of CmaCh10G003610 vs. Swiss-Prot
Match: TM230_RAT (Transmembrane protein 230 OS=Rattus norvegicus GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 1


Query: 28  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of CmaCh10G003610 vs. TrEMBL
Match: A0A0A0LUC1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G426960 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 9.7e-48
Identity = 97/103 (94.17%), Postives = 99/103 (96.12%), Query Frame = 1


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI+MDSPF VNNRPPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RVHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of CmaCh10G003610 vs. TrEMBL
Match: A0A068U364_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041466001 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.6e-42
Identity = 84/103 (81.55%), Postives = 97/103 (94.17%), Query Frame = 1


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI+DEDI+MD+P+ VNNRPPIKEIALAV+LLVFG +GIV+G  MA N+VGGD
Sbjct: 1   MAYVDHAFSISDEDIMMDTPYTVNNRPPIKEIALAVALLVFGTLGIVLGVIMAVNKVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FF++LG +LF+PGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGGILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of CmaCh10G003610 vs. TrEMBL
Match: A0A0K9QFP1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_189790 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.6e-42
Identity = 84/103 (81.55%), Postives = 97/103 (94.17%), Query Frame = 1


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI+MD+ + +NN+PPIKEIALAVSLLVFG++GIV+G FMA N VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FF++LGA+LF+PGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of CmaCh10G003610 vs. TrEMBL
Match: A0A0J8E2T6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g155360 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.7e-42
Identity = 83/103 (80.58%), Postives = 97/103 (94.17%), Query Frame = 1


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI+MD+ + +NN+PPI+EIALAVSLLVFG+IGIV+G  MA+NRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDNSYAINNKPPIREIALAVSLLVFGVIGIVLGILMAANRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FF++LG +LF+PGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGGILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of CmaCh10G003610 vs. TrEMBL
Match: A0A059BYD8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03859 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-41
Identity = 85/103 (82.52%), Postives = 97/103 (94.17%), Query Frame = 1


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI+DED++M++ + VNNRPPIKEIALAVSLLVFG IGIV+G  MAS +VGGD
Sbjct: 1   MAYVDHAFSISDEDMMMETTYTVNNRPPIKEIALAVSLLVFGSIGIVLGIIMASYKVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFF++LG++LFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFTMLGSILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of CmaCh10G003610 vs. TAIR10
Match: AT4G29850.1 (AT4G29850.1 Eukaryotic protein of unknown function (DUF872))

HSP 1 Score: 173.7 bits (439), Expect = 5.8e-44
Identity = 83/103 (80.58%), Postives = 93/103 (90.29%), Query Frame = 1


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI++++ + VNNRPP+KEIALAV+LLVFG +GIV G FMA NRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMIETSYTVNNRPPVKEIALAVALLVFGTLGIVSGFFMAYNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of CmaCh10G003610 vs. TAIR10
Match: AT2G19350.1 (AT2G19350.1 Eukaryotic protein of unknown function (DUF872))

HSP 1 Score: 166.8 bits (421), Expect = 7.1e-42
Identity = 79/103 (76.70%), Postives = 92/103 (89.32%), Query Frame = 1


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI+DED+++ + + V+NRPP+KEI+LAV LLVFG +GIV+G FMA NRVGGD
Sbjct: 1   MAYVDHAFSISDEDLMIGTSYTVSNRPPVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPSV 103

[Close]

BLAST of CmaCh10G003610 vs. TAIR10
Match: AT3G29170.1 (AT3G29170.1 Eukaryotic protein of unknown function (DUF872))

HSP 1 Score: 65.9 bits (159), Expect = 1.7e-11
Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 1


Query: 25  NRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRI 84
           +R P K IALAV LL  G + +++  F+    + GD + G    +LG L F+PGFY TRI
Sbjct: 43  DRVPWKSIALAVFLLFLGCLLLLLSFFIFIGHMEGDSSQGYALLVLGILTFLPGFYETRI 102

Query: 85  AYYAYKGYKGFSFSNIP 102
           AYY+++G +G+ F+ IP
Sbjct: 103 AYYSWRGAEGYRFAAIP 119

[Close]

BLAST of CmaCh10G003610 vs. NCBI nr
Match: gi|659107152|ref|XP_008453547.1| (PREDICTED: transmembrane protein 230-like [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 4.8e-48
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI+MDSPF VNNRPPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of CmaCh10G003610 vs. NCBI nr
Match: gi|449457205|ref|XP_004146339.1| (PREDICTED: transmembrane protein 230-like [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 1.4e-47
Identity = 97/103 (94.17%), Postives = 99/103 (96.12%), Query Frame = 1


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI+MDSPF VNNRPPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RVHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of CmaCh10G003610 vs. NCBI nr
Match: gi|902151251|gb|KNA05498.1| (hypothetical protein SOVF_189790 [Spinacia oleracea])

HSP 1 Score: 179.9 bits (455), Expect = 2.3e-42
Identity = 84/103 (81.55%), Postives = 97/103 (94.17%), Query Frame = 1


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI+MD+ + +NN+PPIKEIALAVSLLVFG++GIV+G FMA N VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FF++LGA+LF+PGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of CmaCh10G003610 vs. NCBI nr
Match: gi|661893196|emb|CDP03005.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 179.9 bits (455), Expect = 2.3e-42
Identity = 84/103 (81.55%), Postives = 97/103 (94.17%), Query Frame = 1


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI+DEDI+MD+P+ VNNRPPIKEIALAV+LLVFG +GIV+G  MA N+VGGD
Sbjct: 1   MAYVDHAFSISDEDIMMDTPYTVNNRPPIKEIALAVALLVFGTLGIVLGVIMAVNKVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FF++LG +LF+PGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGGILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of CmaCh10G003610 vs. NCBI nr
Match: gi|731367784|ref|XP_010695798.1| (PREDICTED: transmembrane protein 230-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 178.3 bits (451), Expect = 6.7e-42
Identity = 83/103 (80.58%), Postives = 97/103 (94.17%), Query Frame = 1


Query: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI+MD+ + +NN+PPI+EIALAVSLLVFG+IGIV+G  MA+NRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDNSYAINNKPPIREIALAVSLLVFGVIGIVLGILMAANRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FF++LG +LF+PGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGGILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

The following BLAST results are available for this feature:

BLAST of CmaCh10G003610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TM230_CHICK	1.0e-10	48.05	Transmembrane protein 230 OS=Gallus gallus GN=TMEM230 PE=2 SV=1	[more]
TM230_PONAB	1.0e-10	46.75	Transmembrane protein 230 OS=Pongo abelii GN=TMEM230 PE=2 SV=1	[more]
TM230_HUMAN	1.8e-10	46.75	Transmembrane protein 230 OS=Homo sapiens GN=TMEM230 PE=1 SV=1	[more]
TM230_MOUSE	1.8e-10	46.75	Transmembrane protein 230 OS=Mus musculus GN=Tmem230 PE=1 SV=1	[more]
TM230_RAT	1.8e-10	46.75	Transmembrane protein 230 OS=Rattus norvegicus GN=Tmem230 PE=1 SV=1	[more]

BLAST of CmaCh10G003610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUC1_CUCSA	9.7e-48	94.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G426960 PE=4 SV=1	[more]
A0A068U364_COFCA	1.6e-42	81.55	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041466001 PE=4 SV=1	[more]
A0A0K9QFP1_SPIOL	1.6e-42	81.55	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_189790 PE=4 SV=1	[more]
A0A0J8E2T6_BETVU	4.7e-42	80.58	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g155360 PE=4 S...	[more]
A0A059BYD8_EUCGR	1.0e-41	82.52	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03859 PE=4 SV=1	[more]

BLAST of CmaCh10G003610 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G29850.1	5.8e-44	80.58	Eukaryotic protein of unknown function (DUF872)	[more]
AT2G19350.1	7.1e-42	76.70	Eukaryotic protein of unknown function (DUF872)	[more]
AT3G29170.1	1.7e-11	44.16	Eukaryotic protein of unknown function (DUF872)	[more]

BLAST of CmaCh10G003610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107152\|ref\|XP_008453547.1\|	4.8e-48	95.15	PREDICTED: transmembrane protein 230-like [Cucumis melo]	[more]
gi\|449457205\|ref\|XP_004146339.1\|	1.4e-47	94.17	PREDICTED: transmembrane protein 230-like [Cucumis sativus]	[more]
gi\|902151251\|gb\|KNA05498.1\|	2.3e-42	81.55	hypothetical protein SOVF_189790 [Spinacia oleracea]	[more]
gi\|661893196\|emb\|CDP03005.1\|	2.3e-42	81.55	unnamed protein product [Coffea canephora]	[more]
gi\|731367784\|ref\|XP_010695798.1\|	6.7e-42	80.58	PREDICTED: transmembrane protein 230-like [Beta vulgaris subsp. vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008590	DUF872_TM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G003610.1	CmaCh10G003610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008590	Protein of unknown function DUF872, transmembrane	PFAM	PF05915	DUF872	coord: 29..101 score: 2.7
None	No IPR available	PANTHER	PTHR15664	C20ORF30 PROTEIN	coord: 1..102 score: 8.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh10G003610	CmoCh10G003910	Cucurbita moschata (Rifu)	cmacmoB067
CmaCh10G003610	Lsi06G012170	Bottle gourd (USVL1VR-Ls)	cmalsiB068
CmaCh10G003610	Cp4.1LG04g13270	Cucurbita pepo (Zucchini)	cmacpeB092
CmaCh10G003610	Cp4.1LG18g06450	Cucurbita pepo (Zucchini)	cmacpeB080
CmaCh10G003610	Cla97C06G123200	Watermelon (97103) v2	cmawmbB080
CmaCh10G003610	Carg09067	Silver-seed gourd	carcmaB0828
CmaCh10G003610	Carg15209	Silver-seed gourd	carcmaB1091

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh10G003610	CmaCh11G003490	Cucurbita maxima (Rimu)	cmacmaB072

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh10G003610	Melon (DHL92) v3.6.1	cmamedB070
CmaCh10G003610	Cucumber (Chinese Long) v3	cmacucB0060
CmaCh10G003610	Cucumber (Chinese Long) v3	cmacucB0068
CmaCh10G003610	Watermelon (97103) v2	cmawmbB081
CmaCh10G003610	Wax gourd	cmawgoB0077
CmaCh10G003610	Cucumber (Gy14) v1	cgycmaB0785
CmaCh10G003610	Cucurbita moschata (Rifu)	cmacmoB068
CmaCh10G003610	Wild cucumber (PI 183967)	cmacpiB060
CmaCh10G003610	Cucumber (Chinese Long) v2	cmacuB058
CmaCh10G003610	Melon (DHL92) v3.5.1	cmameB067
CmaCh10G003610	Watermelon (Charleston Gray)	cmawcgB071
CmaCh10G003610	Watermelon (97103) v1	cmawmB071
CmaCh10G003610	Bottle gourd (USVL1VR-Ls)	cmalsiB075
CmaCh10G003610	Cucumber (Gy14) v2	cgybcmaB015