CmaCh10G000640 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh10G000640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Snurportin-1
Location	Cma_Chr10 : 242689 .. 248326 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGCCTTCATTTCGATAATTGAGTTTTAGCGCAAAGATGGCACCGCGCATTCGCTGTCCGCACAGACGGCCAGCCATCTCCGAAACATTAAAACCGGCGGGAACTTTCTTTGCAACAGCAACTGCAGAAGTGCCGCGACGCTCAGCAACAAGCCCGCTCCTTAGCCTCCACGCTCCTCTCCCTTTCATCCACATTTAACGAGCCTATTACCTCTGAGCCGGTGCTGGAAATTGAACTAAACGAACTCGAATCCGAAACAGAATGATTTCCTGAGCTACTACCGCAGGATGAGTTTAACGAGCCTGCTCTGATAGATCTCGATGTGCTCCAGGCTTTGAAGCTCAAAGGTTCAGAGGCTCGTAAGTGGTTATCGAAGCAACTGTTGCTTCCTGAATGGATGATAGATGTTCCTGATCGGCTTAGCGAAGACAGGTTATAATTCCTTCTCATCTCTCTGTTACTAATATTAAGTTATCTATTTACGCTTATGTTTTCTTCAACTACTACTTCGGCTTGGATCTTGTTACTATTTACTCGATGCCTCATTTGATCATCGCGGCTTTGGTATTGGTTTTATGAGCACTGTTTTTTGCTCCAAATTGCATGTTCGCATTCAAATTCAAATCTGATCATCGCGGCTCCGGTTGTTTCATTCTCACTCACTTCCGGTGCTAGGCCAATTTGTATACCGAGCTTAATTTTGATTGCTCATTTTTGTTTGTTTGTTTGAGTGTTTGATCCTCCACACCATAGATAAAGCTTTCTGGTTGCACAAATGTCTGATTCTTACATCAACAAGGATTCAGACAATGAAAAGGAAAAAGAGAGAATGTTAATTTCTCAATGAATTTGATTCGAATGATCGAAGCTGAGGTTGACGTTTCTGTTGTGCTTTGGATGTTTGTAGATACGTACTTGCAAGGCCTTCCGGTAAATGATGCTTTGTAGTTTCATCAGCAGGCTACGAAATGGATCAATTCTGCATCGGTTTCCTTCTGCTCTACCTAACGGAGCAAAGACAAAAAAATGCCTCTGGATCCGGTCAAACATATTGTATTCTAAATTGTATATTTCAGGAGGTAAGTTTCTCGTAATTCCTATGCCATTCATAGTCCACGTTTTTTTTATTTATTAGTAAAGGTTTGAATGTCCTGTAGATGGACAAATGTACTACGTCATTGATATGATTTGTTGACGTGGATTTCTCTTTATGATTACACAGCTGAGTTTCGCTTCTTCTGGCTCAATTCCAAGCTTGTTGAAACTGGTGCTTGTGAGCCACCTTCATACTATCACGAATATAAATTCAGCTTGATACCTTTGTATACATGCCATCAAAATAGTCTCTATGTGGCTTATACAGGAGCCGTACCTTTTGTCAAGGATGATCTATTATTTTACAAGTAAGATTTATCATCAAGCAATGATTTAATACATTGCGAGTTCTCCATCTCCTTTTAAATGAGGTTTTAATTTTATTTTCTTTATGTATAAATTTTCATTTAGTTGATAACCTCTGTTATCTTGTATTGGAATATTTTGGAACCTGTGGAACACTCCTTATGTACATGTAGAATTACATATTTAACAATTTTCAATTTATAATGTTATGATGCTTATGCTTGATAATTGCTATGCTCTGTTCTTCTTGTTAAGTTATTTCTTTCATTTTATGAATCTGTTTCTATGCTTACAAGGTATAACTTCATCCATCGCGTATTAAGAAGTTGTCTTTGTTCTAGGCATTCCCATTACCAGCCAGATACACCACTTGCATTGGTCTGGAAGGATGAGAATTGCAGTCGATATGTTATTGACACAGATAAAATGGACAAGTTCCAAGCCAGCAGCAGGTACTTTATCTCTGCATTTCTTGTTATTAAAAAAAAAAAAAAAAAACTATATGAATGTCTGCAATTATTTTCTTCCTTTCTTTTTCCTTTTTATAAATAATGTTGCCACTATCTTAGTTTCTAGTCAATTGCAGTGGTCAATGATCCATTTTTGTGATACGACATGGATCTGTTCTCTCTCTCTCTCTCTCATGCAGTTTATAATGCTAATACTGCCTTATTTGAATGATCAGCTGGTTTTGGAGCTACAAGGTGATGGAAAGGGTGCTACATTTGATGATCCTTCTGTGGACATTGGTTGCTTAGATGGTGACTTGATCGAAAAGGTTTTGTTGATCCAAATTTAACCCTTTCTATGGTTCATTAGTTTTAAAATTCTTTTGTTTATTACATGTTGCTTCCTTCGACTACATTTCTGCTTGCAATGAGGTCTGTGGTTATTATGTCTTCTTTCTGTCCTTGTTGGTTTGTTGTGTAATTTGGCATGGTACCTATGTCACCATATCTTAGTTTTAATGTTGTTATTGGGGATTGTGTTAGCTGAAGAAACTGTTGCTTGATATTGGCACCTCTCTCTCTCTCTCTTTGCATCTCATATTTTGGTCTCCCTTTCTGTTACATACATCCCTTCTCAATTACTTCATTTCTTTTCACTTATTTGGCTCCCCTGCTATGATAACCCTTGGTCACTCTACTCTCTTTTTATCCTTTGGTTTAGATTCTTACGGATGTTTGTAGTGGTTATGGTCCTCGGAGTCAGGCTTATCATTCTATGTTGAAGACATTTTGCGGCCTCTTCTTTGACTAGACTTTTATGGTTAACTTGTTTATTTGGTATCTCATGAGACATACTGTTGGGAAGGATCAAGAGGGTGTAGACGAGTATGGGAGGGGTTCTGGGAGGAGATTTTTGTTTAACTCACTTCAATAGCCCATTTGGTCAATGCCACGAGTTTCATGCATGCAGATTTTCTGTTGTTATTTATTACCAACATTTGAGGTTCCTTCTTTGTCAGCAAGTAAATACCAGAATTTCTTGAATTTTCAGTTAGGGTTTGTCTTCAGGTAATCTATTGCGATTTATCATTGTTGATGGTGGGTTGACCATTGTTGACGGGAGGATTCAGAGGGCAGATTTACATTACACTGGCAAGGTCAATCCAGCTAGAGGATAGTTACTCCAAGGTTAGCAATTGTGCTAAATATCATACTTGTAGGGTCAAATCATATTCATAAAAACTAATTGACAATTAGTTTTATGAATAATTACTGCCGTTTCTTTTAAATGCCATGAATTTATCCAGATCATAATTTTAGGTAGAATACTTGTGCGCTGTTATTTGTTTACTTTGTTTCTAGCCATTTATGGAAAAGCCACATATGCTGGTTGTGTTTCAATACGCGGCTCGTTGCTCACTTTTAAGAATAGATTATCCATTATCACCCATCAATCATCGAATGATTGGAGAAGATAATGTTACTGAAATTGTTGGATAGTGGTCGATAGCCCTAGGGGCGGAGCTAGACATTTTCCTGCATGAAACTCAGGCAGCTTTCTGTTAAATCAAGTTGAGAAATACTTTCTCTATTCTTGAAACCGAAAAATTCATGGTATTCAACGTGGTTCAAATTGAAAAGTTGGTGAATCCTTCGCTGGAAACTACTGAGTCCTTTTAGAGGTAATCCCTTACAGTGAACATTTGTAGATAATTCATCGGATTCAATATATATTGTAAGCTGCGAGTATCGTGACAAACGACTCAAATATTTTTTTCTTGTCTTAAATGGACAAGCAACCTTCAGGTGCTGACCTTTCATCAAGGATTCTAGAGTTGGTTTTCAATTTACGGGTAAGTTTTAACAACTGTGGAACGGATCCTCTTATTATTGAGTTCCATTTGCTTCCTCATAGTGGTTTGAAAATTAAACATTTTGCTTGAAGTATGTATTCAGCTTAGCGACGTTGACAACTTAAAGGCTGGCTGGCTTAAGCACAACAAATTGTTTCTGTAACAATCAATGAAAGGAACGACAATCAGTTCTTGAGGTTCTTCAGGTACGCCAATAAAGAATCTTTTGCAAAACGAGACATCAATTTGATATTTGATACATTTTAATAATGGTTTTTAAATAGGGTAATTCTAAAATATTTTTTAAAAAAATTGAGAGCGTGATAGGTTGGTAAAATTGTCTGTTAAATAGATGCAAGTCTCTTCGATTTTTCTTTTTTGATTTTTAATTCTGAAAACTAACTCTATAATTTCTATTCAAGACTATTTTTGTTTTAATTTTAAAATCAGAAAGCTAGTTTTTCAAAATTCAACTATGATTATAAAGCGATTATGCATGTAGATTTAAGATATTAGTACGTGTATGAGAATAATTTTTATAAAGTAGAAAACGAAAGGCCAATATTATCTTTAAATACATGGTCTTTACTTTCCACCTAGTTTCCCAACCCCTTGTAAACTAAAGTTCTATGATTTGATGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTATATCAGCTCAAAATCAATTTAGAACCAACAAAACTGAATTAGCACATAAGATTAAAGTTGAAGCTTATTAAGGAAGTGGTTCGTAAAATTTATTGTTGAAAAGACCAGCTCCTTTTGTTTTTTATTAAAAAAATGTTACAGTCGGTTTTAGTTTTCAAAATTTAACTATGATTTTAAAACAATTTTGAAAGAATATTTATTAAAAAGATATAATAAATAAGTATACTTTTCTAAAAAAGACAAATGACTTTGTAAGTACTTTTCTAAGCCCTTATTGGACTAACTGAAAGTACACTTTTCATTCCTGAATTTTGGATTATTTCATTTTGGTATGTAGTTCTGTATTGGTTGTTCCGTCTAGTTTTTCCGTTAAACAAAATTGATGTAATTTTTTATTATAAATATTATATTTTAATTCCTCAAAATAAATACATTTTAAATTGTTTAAAAAAATACGTTTTAAAATTTTCAAAATAAAATATTTTCAAGTTTTTAAAAATTAAAGTCTTTTTTCTTTTTTAGCCGACAGTCTCTTTTTTGGCGGCATCGGGAGGGAGAAAAAGAAAATACCATTATGTTTTGTTTTTGAAAAGAGTTATTGGGACCAAAAAAATTGTTCACTCTATCCTAATTTTAAAGGCTAAAATATAAAATTTTAAAATTTTAGAATTGAAATGCAAACTAAGAACCTTAAGAACAAAAGGAGAGAGTCCCTGTGATTGCATTATCTAATTATTATCTAAATAAACAAAACTATTATATTTCAGGGAGACGATATATGAAATGCAACTAGCACATGAAAGAGGAGAAAGTCCAGTTCAGGCGGCCATAGTTGTGCGTTCGCAGCTGTCGGGAACACAGGCCAAGACGTCTCTGTAGTCTCTTGAAATGGTAAAGGAATCATACACCTTACCGTCGCTGCTTTTCTTGTACTCGAAAAGCAGAGAATGACGGTCGAATGCCGTCAACTTTACGAAACCAAAATCGTAGTCTCTGTACAGACTCCATTTGGGGATTTCCTTGGTGAATGCGGATAAGTGGCTCCCTGCTCCGCCCGCAACCACGTGGATTGTGCCATTCATAGTGCCCGAATAGTGACTTTTTTCTTCATTCACGCATTGATTCTACACGAGCACCATGAAAACATAATGGCAAACAAAGTTTAGAATAAAGGCATGATATGGATTTTCCTTAAAAAAA

mRNA sequence

ACTGCCTTCATTTCGATAATTGAGTTTTAGCGCAAAGATGGCACCGCGCATTCGCTGTCCGCACAGACGGCCAGCCATCTCCGAAACATTAAAACCGGCGGGAACTTTCTTTGCAACAGCAACTGCAGAAGTGCCGCGACGCTCAGCAACAAGCCCGCTCCTTAGCCTCCACGCTCCTCTCCCTTTCATCCACATTTAACGAGCCTATTACCTCTGAGCCGGTGCTGGAAATTGAACTAAACGAACTCGAATCCGAAACAGAATGATTTCCTGAGCTACTACCGCAGGATGAGTTTAACGAGCCTGCTCTGATAGATCTCGATGTGCTCCAGGCTTTGAAGCTCAAAGGTTCAGAGGCTCGTAAGTGGTTATCGAAGCAACTGTTGCTTCCTGAATGGATGATAGATGTTCCTGATCGGCTTAGCGAAGACAGATACGTACTTGCAAGGCCTTCCGGTAAATGATGCTTTGTAGTTTCATCAGCAGGCTACGAAATGGATCAATTCTGCATCGGTTTCCTTCTGCTCTACCTAACGGAGCAAAGACAAAAAAATGCCTCTGGATCCGGTCAAACATATTGTATTCTAAATTGTATATTTCAGGAGCTGAGTTTCGCTTCTTCTGGCTCAATTCCAAGCTTGTTGAAACTGGTGCTTGTGAGCCACCTTCATACTATCACGAATATAAATTCAGCTTGATACCTTTGTATACATGCCATCAAAATAGTCTCTATGTGGCTTATACAGGAGCCGTACCTTTTGTCAAGGATGATCTATTATTTTACAAGCATTCCCATTACCAGCCAGATACACCACTTGCATTGGTCTGGAAGGATGAGAATTGCAGTCGATATGTTATTGACACAGATAAAATGGACAAGTTCCAAGCCAGCAGCAGCTGGTTTTGGAGCTACAAGGTGATGGAAAGGGTGCTACATTTGATGATCCTTCTGTGGACATTGGTTGCTTAGATGGTGACTTGATCGAAAAGGTAATCTATTGCGATTTATCATTGTTGATGGTGGGTTGACCATTGTTGACGGGAGGATTCAGAGGGCAGATTTACATTACACTGGCAAGGTCAATCCAGCTAGAGGATAGTTACTCCAAGTGGTCGATAGCCCTAGGGGCGGAGCTAGACATTTTCCTGCATGAAACTCAGGCAGCTTTCTGTTAAATCAAGTTGAGAAATACTTTCTCTATTCTTGAAACCGAAAAATTCATGGTATTCAACGTGGTTCAAATTGAAAAGTTGGTGAATCCTTCGCTGGAAACTACTGAGTCCTTTTAGAGCAACCTTCAGGTGCTGACCTTTCATCAAGGATTCTAGAGTTGGTTTTCAATTTACGGTATGTATTCAGCTTAGCGACGTTGACAACTTAAAGGCTGGCTGGCTTAAGCACAACAAATTGTTTCTGTAACAATCAATGAAAGGAACGACAATCAGTTCTTGAGGTTCTTCAGGGAGACGATATATGAAATGCAACTAGCACATGAAAGAGGAGAAAGTCCAGTTCAGGCGGCCATAGTTGTGCGTTCGCAGCTGTCGGGAACACAGGCCAAGACGTCTCTGTAGTCTCTTGAAATGGTAAAGGAATCATACACCTTACCGTCGCTGCTTTTCTTGTACTCGAAAAGCAGAGAATGACGGTCGAATGCCGTCAACTTTACGAAACCAAAATCGTAGTCTCTGTACAGACTCCATTTGGGGATTTCCTTGGTGAATGCGGATAAGTGGCTCCCTGCTCCGCCCGCAACCACGTGGATTGTGCCATTCATAGTGCCCGAATAGTGACTTTTTTCTTCATTCACGCATTGATTCTACACGAGCACCATGAAAACATAATGGCAAACAAAGTTTAGAATAAAGGCATGATATGGATTTTCCTTAAAAAAA

Coding sequence (CDS)

ATGATGCTTTGTAGTTTCATCAGCAGGCTACGAAATGGATCAATTCTGCATCGGTTTCCTTCTGCTCTACCTAACGGAGCAAAGACAAAAAAATGCCTCTGGATCCGGTCAAACATATTGTATTCTAAATTGTATATTTCAGGAGCTGAGTTTCGCTTCTTCTGGCTCAATTCCAAGCTTGTTGAAACTGGTGCTTGTGAGCCACCTTCATACTATCACGAATATAAATTCAGCTTGATACCTTTGTATACATGCCATCAAAATAGTCTCTATGTGGCTTATACAGGAGCCGTACCTTTTGTCAAGGATGATCTATTATTTTACAAGCATTCCCATTACCAGCCAGATACACCACTTGCATTGGTCTGGAAGGATGAGAATTGCAGTCGATATGTTATTGACACAGATAAAATGGACAAGTTCCAAGCCAGCAGCAGCTGGTTTTGGAGCTACAAGGTGATGGAAAGGGTGCTACATTTGATGATCCTTCTGTGGACATTGGTTGCTTAG

Protein sequence

MMLCSFISRLRNGSILHRFPSALPNGAKTKKCLWIRSNILYSKLYISGAEFRFFWLNSKLVETGACEPPSYYHEYKFSLIPLYTCHQNSLYVAYTGAVPFVKDDLLFYKHSHYQPDTPLALVWKDENCSRYVIDTDKMDKFQASSSWFWSYKVMERVLHLMILLWTLVA

Homology

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BLAST of CmaCh10G000640 vs. TrEMBL
Match: A0A0A0LNL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002050 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-47
Identity = 100/154 (64.94%), Postives = 113/154 (73.38%), Query Frame = 1


Query: 7   ISRLRNGSILHRFPSALPNGAKTKK------------CLWIRSNILYS----------KL 66
           ISRLRNGSILHRFPS+LPNGAKTKK            C++  ++  Y            L
Sbjct: 190 ISRLRNGSILHRFPSSLPNGAKTKKASGSGQTYSILDCIFHETDQTYYVIDMICWRGYSL 249

Query: 67  YISGAEFRFFWLNSKLVETGACEPPSYYHEYKFSLIPLYTCHQNSLYVAYTGAVPFVKDD 126
           Y   AEFRFFWLNSKL E+GACE PSYYH+YKFSL+P+Y+C QN L+ AY GA PFVKD 
Sbjct: 250 YDCAAEFRFFWLNSKLAESGACELPSYYHKYKFSLVPVYSCDQNGLHAAYAGAAPFVKDG 309

Query: 127 LLFY-KHSHYQP-DTPLALVWKDENCSRYVIDTD 137
           LLFY KHSHYQP +TPLALVWKDENCS+YVIDTD
Sbjct: 310 LLFYNKHSHYQPGNTPLALVWKDENCSQYVIDTD 343

[Close]

BLAST of CmaCh10G000640 vs. TrEMBL
Match: M5WGI7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006238mg PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.8e-44
Identity = 92/154 (59.74%), Postives = 111/154 (72.08%), Query Frame = 1


Query: 7   ISRLRNGSILHRFPSALPNGAKTKK------------CLWIRSNILYS----------KL 66
           ISR RNG++LHRFPSALPNGA+T+             C++   +  Y            L
Sbjct: 142 ISRQRNGTVLHRFPSALPNGARTRDGSGSAQSYSILDCIFHEMDQTYYVIDMVCWRGYSL 201

Query: 67  YISGAEFRFFWLNSKLVETGACEPPSYYHEYKFSLIPLYTCHQNSLYVAYTGAVPFVKDD 126
           Y   AEFRFFWLNSKL ETGACEPPS+YH+Y+FSL+P++TC Q+ L+ AY G VP+VKD 
Sbjct: 202 YDCTAEFRFFWLNSKLAETGACEPPSHYHKYRFSLVPVHTCDQSGLHAAYAGGVPYVKDG 261

Query: 127 LLFY-KHSHYQP-DTPLALVWKDENCSRYVIDTD 137
           LLFY KH+HYQP +TPLALVWKDENCS+YVIDTD
Sbjct: 262 LLFYNKHAHYQPGNTPLALVWKDENCSQYVIDTD 295

[Close]

BLAST of CmaCh10G000640 vs. TrEMBL
Match: D7SGY3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g01420 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.9e-43
Identity = 89/154 (57.79%), Postives = 107/154 (69.48%), Query Frame = 1


Query: 7   ISRLRNGSILHRFPSALPNGAKTKK------------CLWIRSNILYS----------KL 66
           +SRLRNGS+LH FPSALPNGA+T+             C++   +  Y            L
Sbjct: 139 VSRLRNGSVLHHFPSALPNGARTRDISGSAQSYCILDCIFHELDQTYYVIDMVCWRGYSL 198

Query: 67  YISGAEFRFFWLNSKLVETGACEPPSYYHEYKFSLIPLYTCHQNSLYVAYTGAVPFVKDD 126
           Y   AEFRFFW+NSKL ETGAC+PPS YH Y+FS++P+Y C QN LY AYTGA P+VKD 
Sbjct: 199 YDCTAEFRFFWVNSKLAETGACDPPSPYHRYRFSVVPIYNCDQNGLYTAYTGAAPYVKDG 258

Query: 127 LLFY-KHSHYQP-DTPLALVWKDENCSRYVIDTD 137
           LLFY +H+HYQ  +TPL LVWKDENCS+YVIDTD
Sbjct: 259 LLFYNRHAHYQTGNTPLTLVWKDENCSQYVIDTD 292

[Close]

BLAST of CmaCh10G000640 vs. TrEMBL
Match: B9RAG5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1506350 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-42
Identity = 91/154 (59.09%), Postives = 108/154 (70.13%), Query Frame = 1


Query: 7   ISRLRNGSILHRFPSALPNGAKTKK------------CLWIRSNILYS----------KL 66
           +SR RNGSILHRFPSALPNGAKT+             C++   +  Y            L
Sbjct: 135 VSRQRNGSILHRFPSALPNGAKTRDLSGSSQSYSILDCIFHELDQTYYVIDMVCWRGYSL 194

Query: 67  YISGAEFRFFWLNSKLVETGACEPPSYYHEYKFSLIPLYTCHQNSLYVAYTGAVPFVKDD 126
           Y   AEFRFFWLNSKL ETGAC PPS YH+Y+FS++P+Y C Q+ L+ AYTG+VP+ KD 
Sbjct: 195 YDCSAEFRFFWLNSKLGETGACNPPSVYHKYRFSIVPVYNCDQSGLWSAYTGSVPYTKDG 254

Query: 127 LLFY-KHSHYQ-PDTPLALVWKDENCSRYVIDTD 137
           LLFY KH+HYQ  +TPLALVWKDENCS+YVIDTD
Sbjct: 255 LLFYNKHAHYQMGNTPLALVWKDENCSQYVIDTD 288

[Close]

BLAST of CmaCh10G000640 vs. TrEMBL
Match: B9IFA8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s10740g PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.6e-42
Identity = 90/154 (58.44%), Postives = 108/154 (70.13%), Query Frame = 1


Query: 7   ISRLRNGSILHRFPSALPNGAKTKK------------CLWIRSNILYS----------KL 66
           +SR RNGSILHRFPSALPNGAK +             C++   +  Y            L
Sbjct: 140 VSRQRNGSILHRFPSALPNGAKKRDGSGPNQSYCILDCIFHELDQTYYVIDMVCWRGYSL 199

Query: 67  YISGAEFRFFWLNSKLVETGACEPPSYYHEYKFSLIPLYTCHQNSLYVAYTGAVPFVKDD 126
           Y   AEFRFFWLNSKL ETGAC+PPS+YH+Y+FS +P+Y C QN L+ AY+G VP+VKD 
Sbjct: 200 YDCAAEFRFFWLNSKLGETGACDPPSFYHKYRFSTVPVYNCDQNGLFSAYSGDVPYVKDG 259

Query: 127 LLFY-KHSHYQP-DTPLALVWKDENCSRYVIDTD 137
           LLFY KH+HYQ  +TPLALVWKD+NCS+YVIDTD
Sbjct: 260 LLFYNKHAHYQTGNTPLALVWKDQNCSQYVIDTD 293

[Close]

BLAST of CmaCh10G000640 vs. TAIR10
Match: AT4G24880.1 (AT4G24880.1 unknown protein)

HSP 1 Score: 164.1 bits (414), Expect = 7.6e-41
Identity = 80/154 (51.95%), Postives = 104/154 (67.53%), Query Frame = 1


Query: 7   ISRLRNGSILHRFPSALPNGAKTK------------KCLWIRSNILYS----------KL 66
           +SR+RNGS LH FPSALP GA+ K             C++  S+  Y            L
Sbjct: 138 VSRVRNGSTLHLFPSALPGGARKKGASGPANSYSILDCIFHESDQTYYVIDMVCWRGYSL 197

Query: 67  YISGAEFRFFWLNSKLVETGACEPPSYYHEYKFSLIPLYTCHQNSLYVAYTGAVPFVKDD 126
           Y   +EFRFFWL SKL ETGAC+PPS YH+++FS++P Y C Q+ L+ AYTG++P+V+D 
Sbjct: 198 YECTSEFRFFWLQSKLAETGACDPPSVYHKFRFSVVPFYNCDQSGLHSAYTGSLPYVRDG 257

Query: 127 LLFY-KHSHYQP-DTPLALVWKDENCSRYVIDTD 137
           LLFY KH+HY   +TPL L+WKDE+CS+YVIDTD
Sbjct: 258 LLFYNKHAHYHTGNTPLVLIWKDESCSQYVIDTD 291

[Close]

BLAST of CmaCh10G000640 vs. NCBI nr
Match: gi|659128908|ref|XP_008464431.1| (PREDICTED: snurportin-1 [Cucumis melo])

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-47
Identity = 100/154 (64.94%), Postives = 111/154 (72.08%), Query Frame = 1


Query: 7   ISRLRNGSILHRFPSALPNGAKTKK------------CLWIRSNILYS----------KL 66
           ISRLRNGSILHRFPSALPNGAKTK             C++   +  Y            L
Sbjct: 154 ISRLRNGSILHRFPSALPNGAKTKNASGSGQTYSILDCIFHEPDQTYYVIDMICWRGYSL 213

Query: 67  YISGAEFRFFWLNSKLVETGACEPPSYYHEYKFSLIPLYTCHQNSLYVAYTGAVPFVKDD 126
           Y   AEFRFFWLNSKL E+GACEPPSYYH+YKFSL+P+Y+C QN L+ AY G  PFVKD 
Sbjct: 214 YDCAAEFRFFWLNSKLAESGACEPPSYYHKYKFSLVPVYSCDQNGLHAAYAGEAPFVKDG 273

Query: 127 LLFY-KHSHYQP-DTPLALVWKDENCSRYVIDTD 137
           LLFY KHSHYQP +TPLALVWKDENCS+YVIDTD
Sbjct: 274 LLFYNKHSHYQPGNTPLALVWKDENCSQYVIDTD 307

[Close]

BLAST of CmaCh10G000640 vs. NCBI nr
Match: gi|449440556|ref|XP_004138050.1| (PREDICTED: snurportin-1 [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 1.8e-47
Identity = 100/154 (64.94%), Postives = 113/154 (73.38%), Query Frame = 1


Query: 7   ISRLRNGSILHRFPSALPNGAKTKK------------CLWIRSNILYS----------KL 66
           ISRLRNGSILHRFPS+LPNGAKTKK            C++  ++  Y            L
Sbjct: 154 ISRLRNGSILHRFPSSLPNGAKTKKASGSGQTYSILDCIFHETDQTYYVIDMICWRGYSL 213

Query: 67  YISGAEFRFFWLNSKLVETGACEPPSYYHEYKFSLIPLYTCHQNSLYVAYTGAVPFVKDD 126
           Y   AEFRFFWLNSKL E+GACE PSYYH+YKFSL+P+Y+C QN L+ AY GA PFVKD 
Sbjct: 214 YDCAAEFRFFWLNSKLAESGACELPSYYHKYKFSLVPVYSCDQNGLHAAYAGAAPFVKDG 273

Query: 127 LLFY-KHSHYQP-DTPLALVWKDENCSRYVIDTD 137
           LLFY KHSHYQP +TPLALVWKDENCS+YVIDTD
Sbjct: 274 LLFYNKHSHYQPGNTPLALVWKDENCSQYVIDTD 307

[Close]

BLAST of CmaCh10G000640 vs. NCBI nr
Match: gi|700208389|gb|KGN63485.1| (hypothetical protein Csa_1G002050 [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 1.8e-47
Identity = 100/154 (64.94%), Postives = 113/154 (73.38%), Query Frame = 1


Query: 7   ISRLRNGSILHRFPSALPNGAKTKK------------CLWIRSNILYS----------KL 66
           ISRLRNGSILHRFPS+LPNGAKTKK            C++  ++  Y            L
Sbjct: 190 ISRLRNGSILHRFPSSLPNGAKTKKASGSGQTYSILDCIFHETDQTYYVIDMICWRGYSL 249

Query: 67  YISGAEFRFFWLNSKLVETGACEPPSYYHEYKFSLIPLYTCHQNSLYVAYTGAVPFVKDD 126
           Y   AEFRFFWLNSKL E+GACE PSYYH+YKFSL+P+Y+C QN L+ AY GA PFVKD 
Sbjct: 250 YDCAAEFRFFWLNSKLAESGACELPSYYHKYKFSLVPVYSCDQNGLHAAYAGAAPFVKDG 309

Query: 127 LLFY-KHSHYQP-DTPLALVWKDENCSRYVIDTD 137
           LLFY KHSHYQP +TPLALVWKDENCS+YVIDTD
Sbjct: 310 LLFYNKHSHYQPGNTPLALVWKDENCSQYVIDTD 343

[Close]

BLAST of CmaCh10G000640 vs. NCBI nr
Match: gi|595860668|ref|XP_007211187.1| (hypothetical protein PRUPE_ppa006238mg [Prunus persica])

HSP 1 Score: 186.4 bits (472), Expect = 4.0e-44
Identity = 92/154 (59.74%), Postives = 111/154 (72.08%), Query Frame = 1


Query: 7   ISRLRNGSILHRFPSALPNGAKTKK------------CLWIRSNILYS----------KL 66
           ISR RNG++LHRFPSALPNGA+T+             C++   +  Y            L
Sbjct: 142 ISRQRNGTVLHRFPSALPNGARTRDGSGSAQSYSILDCIFHEMDQTYYVIDMVCWRGYSL 201

Query: 67  YISGAEFRFFWLNSKLVETGACEPPSYYHEYKFSLIPLYTCHQNSLYVAYTGAVPFVKDD 126
           Y   AEFRFFWLNSKL ETGACEPPS+YH+Y+FSL+P++TC Q+ L+ AY G VP+VKD 
Sbjct: 202 YDCTAEFRFFWLNSKLAETGACEPPSHYHKYRFSLVPVHTCDQSGLHAAYAGGVPYVKDG 261

Query: 127 LLFY-KHSHYQP-DTPLALVWKDENCSRYVIDTD 137
           LLFY KH+HYQP +TPLALVWKDENCS+YVIDTD
Sbjct: 262 LLFYNKHAHYQPGNTPLALVWKDENCSQYVIDTD 295

[Close]

BLAST of CmaCh10G000640 vs. NCBI nr
Match: gi|719983358|ref|XP_010250733.1| (PREDICTED: snurportin-1 [Nelumbo nucifera])

HSP 1 Score: 183.7 bits (465), Expect = 2.6e-43
Identity = 91/154 (59.09%), Postives = 109/154 (70.78%), Query Frame = 1


Query: 7   ISRLRNGSILHRFPSALPNGAKTKK------------CLWIRSNILYS----------KL 66
           +SRLRNGSILH FPSALPNGA+T+             C++   +  Y            L
Sbjct: 138 VSRLRNGSILHHFPSALPNGARTRDISGPAHSFCILDCIFHEPDQTYYVIDMVCWRGYSL 197

Query: 67  YISGAEFRFFWLNSKLVETGACEPPSYYHEYKFSLIPLYTCHQNSLYVAYTGAVPFVKDD 126
           Y   AEFRFFWLNSKL ETGAC+PPS YH+Y+FSL+P+Y C+Q  L+ AYTG VP+VKD 
Sbjct: 198 YDCSAEFRFFWLNSKLAETGACDPPSLYHKYRFSLVPIYECNQIGLHTAYTGVVPYVKDG 257

Query: 127 LLFY-KHSHYQP-DTPLALVWKDENCSRYVIDTD 137
           LLFY KH+HYQ  +TPLALVWKDENCS+YV+DTD
Sbjct: 258 LLFYNKHAHYQTGNTPLALVWKDENCSQYVLDTD 291

The following BLAST results are available for this feature:

BLAST of CmaCh10G000640 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh10G000640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNL4_CUCSA	1.2e-47	64.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002050 PE=4 SV=1	[more]
M5WGI7_PRUPE	2.8e-44	59.74	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006238mg PE=4 SV=1	[more]
D7SGY3_VITVI	6.9e-43	57.79	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g01420 PE=4 SV=...	[more]
B9RAG5_RICCO	1.5e-42	59.09	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1506350 PE=4 SV=1	[more]
B9IFA8_POPTR	2.6e-42	58.44	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s10740g PE=4 SV=1	[more]

BLAST of CmaCh10G000640 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24880.1	7.6e-41	51.95	unknown protein	[more]

BLAST of CmaCh10G000640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128908\|ref\|XP_008464431.1\|	1.3e-47	64.94	PREDICTED: snurportin-1 [Cucumis melo]	[more]
gi\|449440556\|ref\|XP_004138050.1\|	1.8e-47	64.94	PREDICTED: snurportin-1 [Cucumis sativus]	[more]
gi\|700208389\|gb\|KGN63485.1\|	1.8e-47	64.94	hypothetical protein Csa_1G002050 [Cucumis sativus]	[more]
gi\|595860668\|ref\|XP_007211187.1\|	4.0e-44	59.74	hypothetical protein PRUPE_ppa006238mg [Prunus persica]	[more]
gi\|719983358\|ref\|XP_010250733.1\|	2.6e-43	59.09	PREDICTED: snurportin-1 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0061015	snRNA import into nucleus
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G000640.1	CmaCh10G000640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13403	SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1	coord: 5..158 score: 4.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh10G000640	Cucsa.157360	Cucumber (Gy14) v1	cgycmaB0433
CmaCh10G000640	Cla019273	Watermelon (97103) v1	cmawmB072
CmaCh10G000640	Csa1G002050	Cucumber (Chinese Long) v2	cmacuB048
CmaCh10G000640	MELO3C026209	Melon (DHL92) v3.5.1	cmameB065
CmaCh10G000640	ClCG06G017860	Watermelon (Charleston Gray)	cmawcgB072
CmaCh10G000640	CSPI01G00560	Wild cucumber (PI 183967)	cmacpiB049
CmaCh10G000640	CmoCh11G000360	Cucurbita moschata (Rifu)	cmacmoB069
CmaCh10G000640	CmoCh10G000580	Cucurbita moschata (Rifu)	cmacmoB067
CmaCh10G000640	Lsi06G016380	Bottle gourd (USVL1VR-Ls)	cmalsiB072
CmaCh10G000640	Cp4.1LG04g16080	Cucurbita pepo (Zucchini)	cmacpeB094
CmaCh10G000640	MELO3C026209.2	Melon (DHL92) v3.6.1	cmamedB068
CmaCh10G000640	CsaV3_1G000590	Cucumber (Chinese Long) v3	cmacucB0058
CmaCh10G000640	Cla97C06G127580	Watermelon (97103) v2	cmawmbB082
CmaCh10G000640	CsGy1G000570	Cucumber (Gy14) v2	cgybcmaB004
CmaCh10G000640	Carg20169	Silver-seed gourd	carcmaB1448
CmaCh10G000640	Carg10284	Silver-seed gourd	carcmaB0510

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh10G000640	CmaCh11G000340	Cucurbita maxima (Rimu)	cmacmaB073

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh10G000640	Wax gourd	cmawgoB0080
CmaCh10G000640	Wax gourd	cmawgoB0066
CmaCh10G000640	Cucurbita maxima (Rimu)	cmacmaB092
CmaCh10G000640	Cucurbita maxima (Rimu)	cmacmaB101
CmaCh10G000640	Cucumber (Gy14) v1	cgycmaB1082
CmaCh10G000640	Cucurbita moschata (Rifu)	cmacmoB084
CmaCh10G000640	Wild cucumber (PI 183967)	cmacpiB063
CmaCh10G000640	Cucumber (Chinese Long) v2	cmacuB071
CmaCh10G000640	Melon (DHL92) v3.5.1	cmameB051
CmaCh10G000640	Watermelon (Charleston Gray)	cmawcgB061
CmaCh10G000640	Watermelon (97103) v1	cmawmB053
CmaCh10G000640	Cucurbita pepo (Zucchini)	cmacpeB080
CmaCh10G000640	Cucurbita pepo (Zucchini)	cmacpeB082
CmaCh10G000640	Bottle gourd (USVL1VR-Ls)	cmalsiB056
CmaCh10G000640	Cucumber (Gy14) v2	cgybcmaB025
CmaCh10G000640	Cucumber (Gy14) v2	cgybcmaB289
CmaCh10G000640	Melon (DHL92) v3.6.1	cmamedB053
CmaCh10G000640	Silver-seed gourd	carcmaB0686
CmaCh10G000640	Silver-seed gourd	carcmaB1391
CmaCh10G000640	Cucumber (Chinese Long) v3	cmacucB0078
CmaCh10G000640	Cucumber (Chinese Long) v3	cmacucB0085
CmaCh10G000640	Watermelon (97103) v2	cmawmbB068
CmaCh10G000640	Watermelon (97103) v2	cmawmbB077
CmaCh10G000640	Wax gourd	cmawgoB0081