CmaCh10G000330 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh10G000330
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	CASP-like protein
Location	Cma_Chr10 : 118583 .. 119633 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACATTTCATTTCTTTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCATAATAATCTAATATGCCCGACAATAATGTCGAATTGGAAGCCAAGTCCCAGGGCCTCCATGCCAAACTCTACCTCTCTTCCCAGATTATCCTCAGAGCTTCGGTAATTTCCTCCACATTGGCCGCCACCTGGACCCTCATCACCGCCAAGCAATCCGTCGTCATCTTCGGCTTCACTTTGGACGCCCGATACAGCTACTCCTCTGCTTTCAAGTAACTCCCTGCTCCCTGCTCCCTACTCCCTACTCTTTTTTGTTTTCCATATATTTGATCCAAAATTAATTTTATGGTGCAGATTCTTTGCCATAGCCAACGCTGTTGCCTGTGGCTTCTGTCTTCTGTCCGTGTGCTTTGTTTTCATATCAACTCGGCAGTTGGCGTTGGGGAGCCGTCAAAGAAACTTCTTCTTCTTTGTTCACGATTTGTTGATGATGGGATTGGTGCTGAGTGGATGCGCTGCTGCCACCGCCATCGGGTTCGTGGGGAGGTACGGGAACACCCACACAGGGTGGTCGCCCATCTGTGACCAATTCGGCAAGTTTTGCAATCGCATCACCATTTCCATCGCCATCTCTTATTTTGCTGTGCTTTGCCTCCTCATACTCACCATCATCTCTGCAAATCCAACCAAACTCCAACGCTAATTTGGCCCGTTTTGTTGTGTGAACTCCGGTCAGAAATTTGGGAATGGCGAGGTTTGGTTAATGGGTTTAGTGATGATGTGTGCATTTTCCATCTTCTTTGTCCTTACCTTCTGTGTTGCAGCCGCATAACTGATGTTTTTGGTTTTTTCTCATTCTCATAAATTTGCTTTCTACCTTTCTTCCTTTTACTAATTAATTGCATAATATAACATACTTTCTACCTTCAATTCACTTCAACGTGGTTTCTTTTTTTTAATACTATTTTCAGAGTGCCCATTTTTTTCCAGACCAAACCAACCACATAATATATATGTGTATATATATATTCAAAAAAAATATGTGGGCGCAAGCAAC

mRNA sequence

CAACATTTCATTTCTTTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCATAATAATCTAATATGCCCGACAATAATGTCGAATTGGAAGCCAAGTCCCAGGGCCTCCATGCCAAACTCTACCTCTCTTCCCAGATTATCCTCAGAGCTTCGGTAATTTCCTCCACATTGGCCGCCACCTGGACCCTCATCACCGCCAAGCAATCCGTCGTCATCTTCGGCTTCACTTTGGACGCCCGATACAGCTACTCCTCTGCTTTCAAATTCTTTGCCATAGCCAACGCTGTTGCCTGTGGCTTCTGTCTTCTGTCCGTGTGCTTTGTTTTCATATCAACTCGGCAGTTGGCGTTGGGGAGCCGTCAAAGAAACTTCTTCTTCTTTGTTCACGATTTGTTGATGATGGGATTGGTGCTGAGTGGATGCGCTGCTGCCACCGCCATCGGGTTCGTGGGGAGGTACGGGAACACCCACACAGGGTGGTCGCCCATCTGTGACCAATTCGGCAAGTTTTGCAATCGCATCACCATTTCCATCGCCATCTCTTATTTTGCTGTGCTTTGCCTCCTCATACTCACCATCATCTCTGCAAATCCAACCAAACTCCAACGCTAATTTGGCCCGTTTTGTTGTGTGAACTCCGGTCAGAAATTTGGGAATGGCGAGGTTTGGTTAATGGGTTTAGTGATGATGTGTGCATTTTCCATCTTCTTTGTCCTTACCTTCTGTGTTGCAGCCGCATAACTGATGTTTTTGGTTTTTTCTCATTCTCATAAATTTGCTTTCTACCTTTCTTCCTTTTACTAATTAATTGCATAATATAACATACTTTCTACCTTCAATTCACTTCAACGTGGTTTCTTTTTTTTAATACTATTTTCAGAGTGCCCATTTTTTTCCAGACCAAACCAACCACATAATATATATGTGTATATATATATTCAAAAAAAATATGTGGGCGCAAGCAAC

Coding sequence (CDS)

ATGCCCGACAATAATGTCGAATTGGAAGCCAAGTCCCAGGGCCTCCATGCCAAACTCTACCTCTCTTCCCAGATTATCCTCAGAGCTTCGGTAATTTCCTCCACATTGGCCGCCACCTGGACCCTCATCACCGCCAAGCAATCCGTCGTCATCTTCGGCTTCACTTTGGACGCCCGATACAGCTACTCCTCTGCTTTCAAATTCTTTGCCATAGCCAACGCTGTTGCCTGTGGCTTCTGTCTTCTGTCCGTGTGCTTTGTTTTCATATCAACTCGGCAGTTGGCGTTGGGGAGCCGTCAAAGAAACTTCTTCTTCTTTGTTCACGATTTGTTGATGATGGGATTGGTGCTGAGTGGATGCGCTGCTGCCACCGCCATCGGGTTCGTGGGGAGGTACGGGAACACCCACACAGGGTGGTCGCCCATCTGTGACCAATTCGGCAAGTTTTGCAATCGCATCACCATTTCCATCGCCATCTCTTATTTTGCTGTGCTTTGCCTCCTCATACTCACCATCATCTCTGCAAATCCAACCAAACTCCAACGCTAA

Protein sequence

MPDNNVELEAKSQGLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSSAFKFFAIANAVACGFCLLSVCFVFISTRQLALGSRQRNFFFFVHDLLMMGLVLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTKLQR

Homology

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BLAST of CmaCh10G000330 vs. Swiss-Prot
Match: CSPL8_RICCO (CASP-like protein 1F1 OS=Ricinus communis GN=RCOM_1504680 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 8.2e-43
Identity = 94/179 (52.51%), Postives = 126/179 (70.39%), Query Frame = 1


Query: 5   NVELEAKSQGLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSS 64
           NVE +  S     KL++ +QI LR   I +TLAATW ++T KQS+    F + A+Y+YSS
Sbjct: 3   NVEDKYNSPLKSQKLFIGAQICLRIVTIGATLAATWIMVTDKQSITFGDFVMVAKYNYSS 62

Query: 65  AFKFFAIANAVACGFCLLSVCFVFISTRQLALGSRQRN----FFFFVHDLLMMGLVLSGC 124
           AFKFF +AN +AC   ++S+ F+       ALG    N    F  F+HDLLMM LVL+GC
Sbjct: 63  AFKFFVLANVIACACSVVSLLFL------CALGRYSSNPGHVFLLFLHDLLMMSLVLAGC 122

Query: 125 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTK 180
           +AATAIGF+G+YGNT +GW PICDQFG+FCNR TIS+ +SY +++CLLILT+ SAN ++
Sbjct: 123 SAATAIGFLGKYGNTKSGWMPICDQFGQFCNRGTISMMLSYLSMVCLLILTVTSANKSR 175

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BLAST of CmaCh10G000330 vs. Swiss-Prot
Match: CSPL4_VITVI (CASP-like protein 1F1 OS=Vitis vinifera GN=VIT_17s0000g00560 PE=2 SV=2)

HSP 1 Score: 169.5 bits (428), Expect = 3.5e-41
Identity = 94/178 (52.81%), Postives = 125/178 (70.22%), Query Frame = 1


Query: 8   LEAKSQ-----GLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSY 67
           +EAK Q     G H KL+L + I LR   +++TL A W +IT+KQ+V ++G  ++A+YSY
Sbjct: 29  IEAKFQQNPPLGTH-KLFLGAHICLRILTVTATLTAAWMMITSKQTVEVYGIQVEAKYSY 88

Query: 68  SSAFKFFAIANAVACGFCLLSVCFVFISTRQLALGSRQRNFFF-FVHDLLMMGLVLSGCA 127
           SSAFKFF+ ANA+ACG    SV  +F +      GS    FFF F+HDL MM LVL+GCA
Sbjct: 89  SSAFKFFSYANAIACG---CSVLTLFPAFSLFYRGSTPMKFFFLFLHDLCMMSLVLAGCA 148

Query: 128 AATAIGFVGRYGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTK 180
           AATAIG+VGRYGN H GW  ICDQF ++CNRI +S+  SY A + +L+LTI+SAN ++
Sbjct: 149 AATAIGYVGRYGNNHAGWMAICDQFDEYCNRIRLSLMFSYLAFVFILMLTIMSANKSR 202

[Close]

BLAST of CmaCh10G000330 vs. Swiss-Prot
Match: CSPLH_POPTR (CASP-like protein 1F1 OS=Populus trichocarpa GN=POPTRDRAFT_824792 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-39
Identity = 87/180 (48.33%), Postives = 118/180 (65.56%), Query Frame = 1


Query: 1   MPDNNVELEAKSQGLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARY 60
           MP+N  +          KL++  QI  R   I++++A++W +IT+KQ + I G  LDARY
Sbjct: 1   MPNNEAKFSVNQPLKTQKLFIGVQIFFRIVAIAASVASSWLMITSKQVIDIGGIVLDARY 60

Query: 61  SYSSAFKFFAIANAVACGFCLLSVCFVFISTRQLALGSRQRNFFF-FVHDLLMMGLVLSG 120
           SYS  FKF A  N V   F LLS+ F+ +  RQ   GS   ++FF F+HDL MM LV+ G
Sbjct: 61  SYSPEFKFLAFTNIVVGCFSLLSLLFLVLVVRQ---GSNPNHYFFLFLHDLAMMSLVVGG 120

Query: 121 CAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTK 180
           CAAAT +GF+G++GN+HTGW  ICD FGKFCNR   S+ ISY  ++CL ILTI SA+ ++
Sbjct: 121 CAAATTVGFLGKHGNSHTGWMQICDNFGKFCNRAQTSVTISYLNLICLSILTITSASKSR 177

[Close]

BLAST of CmaCh10G000330 vs. Swiss-Prot
Match: CSPL3_POPTR (CASP-like protein 1F2 OS=Populus trichocarpa GN=POPTRDRAFT_823430 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.3e-37
Identity = 83/165 (50.30%), Postives = 113/165 (68.48%), Query Frame = 1


Query: 19  LYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSSAFKFFAIANAVACG 78
           +++ +QI LR  VI+++ A+TW ++T KQ++ I GF LDA YSYS  FKF + AN V   
Sbjct: 19  IFIGAQIFLRIVVIAASFASTWLMLTNKQTIDIGGFVLDANYSYSPEFKFLSYANIVVGA 78

Query: 79  FCLLSVCFVFISTRQLALGSRQRN----FFFFVHDLLMMGLVLSGCAAATAIGFVGRYGN 138
           F  +S+ F+ +      +G R  N    F  F+HDL +M LVL GCAAAT IG +G+YGN
Sbjct: 79  FSFVSLLFLVL------VGRRSSNPTYYFILFLHDLALMSLVLGGCAAATVIGSLGKYGN 138

Query: 139 THTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTK 180
           +HTGW  ICD FGKFC R T S+A SYF+++CLLILTI SA+ ++
Sbjct: 139 SHTGWMQICDHFGKFCKRATTSVAFSYFSLVCLLILTITSASKSR 177

[Close]

BLAST of CmaCh10G000330 vs. Swiss-Prot
Match: CSPLA_RICCO (CASP-like protein 1F2 OS=Ricinus communis GN=RCOM_1446020 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-32
Identity = 68/159 (42.77%), Postives = 112/159 (70.44%), Query Frame = 1


Query: 18  KLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSSAFKFFAIANAVAC 77
           +++  +Q+I R   I+  +A+   ++T+ Q+V++FG    ARYSYSSAF+F   ANAV C
Sbjct: 29  RIFFMAQVIFRILAIAFAVASISAMVTSDQNVIVFGMDTAARYSYSSAFRFLVGANAVVC 88

Query: 78  GFCLLSVCFVFISTRQLALGSRQRNFFFFVHDLLMMGLVLSGCAAATAIGFVGRYGNTHT 137
           GF +LS+ FV + +R+ +    ++N++ F+HD++MM +++SGC+AATAIG+VGRYG    
Sbjct: 89  GFSVLSLIFVCLMSRR-SEAILEKNYYLFLHDMVMMVMMVSGCSAATAIGYVGRYGEKEI 148

Query: 138 GWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISAN 177
            W+ +CD  GKFCN+  +SI ++Y A+ C + LT ++A+
Sbjct: 149 TWTAVCDFVGKFCNQALVSIVLAYLALFCYVALTTLAAH 186

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BLAST of CmaCh10G000330 vs. TrEMBL
Match: A0A0A0LR45_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_1G000725 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 7.0e-49
Identity = 107/157 (68.15%), Postives = 127/157 (80.89%), Query Frame = 1


Query: 23  SQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSSAFKFFAIANAVACGFCLL 82
           SQIILR   I+STLAATW ++TAKQSV+IFG   DARY+ SSAF+FFA ANA+A  FC L
Sbjct: 40  SQIILRVLAIASTLAATWIILTAKQSVLIFGIPFDARYNDSSAFQFFAFANAIASAFCFL 99

Query: 83  SVCF-VFISTRQLALGSRQRNFFFF----VHDLLMMGLVLSGCAAATAIGFVGRYGNTHT 142
           S+CF +F+STR  +  S   NF+ F    +HDLLMMGLVLSGC+AATAIGFVG+YGNTHT
Sbjct: 100 SLCFLIFLSTRPSSNTSTPLNFYIFFFFRLHDLLMMGLVLSGCSAATAIGFVGKYGNTHT 159

Query: 143 GWSPICDQFGKFCNRITISIAISYFAVLCLLILTIIS 175
           GWSPIC+ F  FCNR+T SIAISYF+V+CLLILT +S
Sbjct: 160 GWSPICNHFPSFCNRVTASIAISYFSVICLLILTTLS 196

[Close]

BLAST of CmaCh10G000330 vs. TrEMBL
Match: A0A061FZU4_THECC (CASP-like protein OS=Theobroma cacao GN=TCM_014723 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.5e-43
Identity = 96/163 (58.90%), Postives = 123/163 (75.46%), Query Frame = 1


Query: 18  KLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSSAFKFFAIANAVAC 77
           KL L +QI LR   I++ LAATW ++T+KQ+V++FG   DARYSYSSAFKFFA ANA AC
Sbjct: 18  KLVLGAQICLRIVAIATALAATWVMLTSKQTVMVFGIPFDARYSYSSAFKFFAFANAFAC 77

Query: 78  GFCLLSVCFVFISTRQLALGSRQRNFFF-FVHDLLMMGLVLSGCAAATAIGFVGRYGNTH 137
           GF +LS+ FVF  +R+   G    N+F  F+HDLLMM L LSG AA TAIG+VGR+GN H
Sbjct: 78  GFTVLSLLFVFFFSRR---GLTPANYFLLFLHDLLMMSLALSGVAAGTAIGYVGRFGNIH 137

Query: 138 TGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTK 180
            GW  ICD+ GKFC+++T S+  SY +VLCLL+LTIISA+ ++
Sbjct: 138 AGWLQICDRLGKFCHKVTASLIFSYLSVLCLLVLTIISASKSR 177

[Close]

BLAST of CmaCh10G000330 vs. TrEMBL
Match: A0A0D2QLF2_GOSRA (CASP-like protein OS=Gossypium raimondii GN=B456_007G044200 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-42
Identity = 91/162 (56.17%), Postives = 119/162 (73.46%), Query Frame = 1


Query: 18  KLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSSAFKFFAIANAVAC 77
           KL L +QI LR   IS+  AATWT++ AK++VV+FG   DARY+YSSAFKFFA ANA+AC
Sbjct: 18  KLVLCAQICLRIVAISTAFAATWTIVNAKETVVVFGLQFDARYTYSSAFKFFAFANAIAC 77

Query: 78  GFCLLSVCFVFISTRQLALGSRQRNFFFFVHDLLMMGLVLSGCAAATAIGFVGRYGNTHT 137
           GF  LS+ FV +  R     +    FF F+HDL MM L+LSG AA TAIGFVGRYGN H 
Sbjct: 78  GFTSLSLMFVLLIFRHGRF-TPSNFFFLFLHDLFMMSLILSGVAAGTAIGFVGRYGNNHA 137

Query: 138 GWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTK 180
           GWS ICD+  K+C+++T S+ +SY +V+CL++LT+ISA  ++
Sbjct: 138 GWSEICDRLKKYCDKVTASMVLSYLSVICLVVLTVISAGKSR 178

[Close]

BLAST of CmaCh10G000330 vs. TrEMBL
Match: A0A0D2T599_GOSRA (CASP-like protein OS=Gossypium raimondii GN=B456_006G272700 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.3e-39
Identity = 90/179 (50.28%), Postives = 123/179 (68.72%), Query Frame = 1


Query: 1   MPDNNVELEAKSQGLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARY 60
           M      + AK+     K  L++QI LR +  ++ +AA W + TA Q+V + G + DARY
Sbjct: 1   MEIKEANVRAKAPNKTDKFVLATQICLRIAATATAMAAAWVIFTANQTVEVLGMSFDARY 60

Query: 61  SYSSAFKFFAIANAVACGFCLLSVCFVFISTRQLALGSRQRNFFFFVHDLLMMGLVLSGC 120
           SYS AFKFFA ANA+A GF L+S+ F+F +   L   +    FFFF+HDL+MM LVLSG 
Sbjct: 61  SYSPAFKFFAYANAIAFGFSLMSLFFMFFARHAL---TATIYFFFFLHDLMMMSLVLSGL 120

Query: 121 AAATAIGFVGRYGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTK 180
           AA TAIG V R GN HTGW  ICD+F KFC+++T+S+A+SY AV+CLL+LT++SA  ++
Sbjct: 121 AAGTAIGMVARDGNGHTGWIKICDRFEKFCDKVTVSMALSYVAVVCLLVLTVMSAGKSR 176

[Close]

BLAST of CmaCh10G000330 vs. TrEMBL
Match: V4TAA7_9ROSI (CASP-like protein OS=Citrus clementina GN=CICLE_v10032880mg PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.6e-39
Identity = 87/164 (53.05%), Postives = 115/164 (70.12%), Query Frame = 1


Query: 16  HAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSSAFKFFAIANAV 75
           + K +  +QI LR   I++ LAATW ++T+KQ +VIFG   DARYSYSSAFKFFA AN  
Sbjct: 21  YQKRFHVAQICLRILAIATALAATWVILTSKQHLVIFGIPFDARYSYSSAFKFFAFANVA 80

Query: 76  ACGFCLLSVCFVFISTRQLALGSRQRNFFFFVHDLLMMGLVLSGCAAATAIGFVGRYGNT 135
           A  F LLS+ ++ I             F  F+HDL  M L+L+GCAAATA+G++GRYGN 
Sbjct: 81  ASAFSLLSLLYLLIVPASY--------FLLFLHDLFTMSLLLAGCAAATAVGYIGRYGNE 140

Query: 136 HTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTK 180
           H GW  IC+QFGKFCN++T S+ +SY + LCLL+LTIISA+ ++
Sbjct: 141 HIGWMAICEQFGKFCNKVTASVMLSYLSFLCLLVLTIISASRSR 176

[Close]

BLAST of CmaCh10G000330 vs. TAIR10
Match: AT4G25040.1 (AT4G25040.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-21
Identity = 55/161 (34.16%), Postives = 92/161 (57.14%), Query Frame = 1


Query: 19  LYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSSAFKFFAIANAVACG 78
           L L  Q+ +R   I + +A+ W +IT ++   ++G   +A+YSYSSAF++   A    C 
Sbjct: 13  LNLGVQVSMRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCA 72

Query: 79  FCLLSVCFVFISTRQLALGSRQRNFFFFVHDLLMMGLVLSGCAAATAIGFVGRYGNTHTG 138
             L ++ +  ++ R+  L      F  F  DLL     +S  +AA A G+VG+YGN   G
Sbjct: 73  ATLFTLVWACLAVRRRGLV-----FALFFFDLLTTLTAISAFSAAFAEGYVGKYGNKQAG 132

Query: 139 WSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTK 180
           W PIC     +C+R+TIS+A+S+ + + L ILT+++A+  +
Sbjct: 133 WLPICGYVHGYCSRVTISLAMSFASFILLFILTVLTASAAR 168

[Close]

BLAST of CmaCh10G000330 vs. TAIR10
Match: AT4G15630.1 (AT4G15630.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 86.7 bits (213), Expect = 1.7e-17
Identity = 55/164 (33.54%), Postives = 87/164 (53.05%), Query Frame = 1


Query: 24  QIILRASVISSTLAATWTLITAKQSVVI----------FGFTLDARYSYSSAFKFFAIAN 83
           ++ +R   +  T+ A   L  AKQ+ V+             +  A+ SY SAF +   AN
Sbjct: 28  ELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISAN 87

Query: 84  AVACGFCLLSVCFVFISTRQLALGSRQRNFFF--FVHDLLMMGLVLSGCAAATAIGFVGR 143
           A+ACG+  +S+  V IS      G R ++      + DL+M+ L+ S   AA AIG +GR
Sbjct: 88  AIACGYTAISIVIVMISK-----GKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGR 147

Query: 144 YGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISA 176
           +GN H  W  +C  FGKFCN+  +S+AI+  A +  ++L ++ A
Sbjct: 148 HGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDA 186

[Close]

BLAST of CmaCh10G000330 vs. TAIR10
Match: AT5G15290.1 (AT5G15290.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 75.5 bits (184), Expect = 3.8e-14
Identity = 53/182 (29.12%), Postives = 91/182 (50.00%), Query Frame = 1


Query: 1   MPDNNVELEAKSQGLHAKLYLSSQI-----ILRASVISSTLAATWTLITAKQSVVIFG-- 60
           M     E+   S+G+     +S +I     ILR     +T+ +   + T  +++  F   
Sbjct: 1   MKSGQAEIMETSKGIQKSGLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQF 60

Query: 61  FTLDARYSYSSAFKFFAIANAVACGFCLLSVCFVFISTRQLALGSRQRNFFFFVHDLLMM 120
               A Y+   A  FF +ANAV  G+ +LS+   F+    +   ++       + D+ M+
Sbjct: 61  IRFQAEYNDLPALTFFVVANAVVSGYLILSLTLAFVHI--VKRKTQNTRILLIILDVAML 120

Query: 121 GLVLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTII 176
           GL+ SG ++A AI ++   GN  T W  IC QF  FC RI+ S+  S+ A++ L++L ++
Sbjct: 121 GLLTSGASSAAAIVYLAHNGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILL 180

[Close]

BLAST of CmaCh10G000330 vs. TAIR10
Match: AT4G03540.1 (AT4G03540.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 74.7 bits (182), Expect = 6.5e-14
Identity = 50/150 (33.33%), Postives = 83/150 (55.33%), Query Frame = 1


Query: 25  IILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSSAFKFFAIANAVACGFCLLSV 84
           ++LR +   + LAA   +IT+++       +L+A+Y+  +AFK+F IANAV   +  L  
Sbjct: 11  LVLRLAAFGAALAALIVMITSRERASFLAISLEAKYTDMAAFKYFVIANAVVSVYSFL-- 70

Query: 85  CFVFISTRQLALGSRQRNFFFFVHDLLMMGLVLSGCAAATAIGFVGRYGNTHTGWSPICD 144
             +F+    L         F  V DL+M  L+ S  +AA A+  VG+ GN + GW PIC 
Sbjct: 71  -VLFLPKESLLWK------FVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICG 130

Query: 145 QFGKFCNRITISIAISYFAVLCLLILTIIS 175
           Q  KFC++IT ++   + A++  ++L + S
Sbjct: 131 QVPKFCDQITGALIAGFVALVLYVLLLLYS 151

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BLAST of CmaCh10G000330 vs. TAIR10
Match: AT1G14160.1 (AT1G14160.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 72.4 bits (176), Expect = 3.2e-13
Identity = 53/155 (34.19%), Postives = 81/155 (52.26%), Query Frame = 1


Query: 26  ILRASVISSTLAATWTLITAKQSVVIFG--FTLDARYSYSSAFKFFAIANAVACGFCLLS 85
           +LR   +  T+ +   + T  +SVV       L  +YS      FF +ANA++ G+ +LS
Sbjct: 54  VLRLFAVFGTIGSALAMGTTHESVVSLSQLVLLKVKYSDLPTLMFFVVANAISGGYLVLS 113

Query: 86  V---CFVFISTRQLALGSRQRNFFFFVHDLLMMGLVLSGCAAATAIGFVGRYGNTHTGWS 145
           +    F   ST+     ++       V D +M+ LV SG +AATA  ++   GNT   W 
Sbjct: 114 LPVSIFHIFSTQ-----AKTSRIILLVVDTVMLALVSSGASAATATVYLAHEGNTTANWP 173

Query: 146 PICDQFGKFCNRITISIAISYFAVLCLLILTIISA 176
           PIC QF  FC RI+ S+  S+ AV+ L+++ I SA
Sbjct: 174 PICQQFDGFCERISGSLIGSFCAVILLMLIVINSA 203

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BLAST of CmaCh10G000330 vs. NCBI nr
Match: gi|659128806|ref|XP_008464379.1| (PREDICTED: CASP-like protein POPTRDRAFT_823430 [Cucumis melo])

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-50
Identity = 117/182 (64.29%), Postives = 140/182 (76.92%), Query Frame = 1


Query: 4   NNVELEAKS------QGLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLD 63
           N++ELE+KS      Q     L+L SQIILR  VISSTLAATW ++TAKQSV++FG   D
Sbjct: 7   NDMELESKSCSHRHDQPTITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFD 66

Query: 64  ARYSYSSAFKFFAIANAVACGFCLLSVCF-VFISTRQLALGSRQRNF----FFFVHDLLM 123
           ARY+YSSAF+FFA ANA+A  FC LS+CF +F STR  +  S   NF    FF +HDLLM
Sbjct: 67  ARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSS--STPPNFYILFFFRLHDLLM 126

Query: 124 MGLVLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTI 175
           MGLVLSGC+AATAIG+VG+YGNTH GWSPIC+ F  FCNR+T SIAISY +V+CLLILTI
Sbjct: 127 MGLVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTI 186

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BLAST of CmaCh10G000330 vs. NCBI nr
Match: gi|449440951|ref|XP_004138247.1| (PREDICTED: CASP-like protein 1F2 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 1.0e-48
Identity = 107/157 (68.15%), Postives = 127/157 (80.89%), Query Frame = 1


Query: 23  SQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSSAFKFFAIANAVACGFCLL 82
           SQIILR   I+STLAATW ++TAKQSV+IFG   DARY+ SSAF+FFA ANA+A  FC L
Sbjct: 40  SQIILRVLAIASTLAATWIILTAKQSVLIFGIPFDARYNDSSAFQFFAFANAIASAFCFL 99

Query: 83  SVCF-VFISTRQLALGSRQRNFFFF----VHDLLMMGLVLSGCAAATAIGFVGRYGNTHT 142
           S+CF +F+STR  +  S   NF+ F    +HDLLMMGLVLSGC+AATAIGFVG+YGNTHT
Sbjct: 100 SLCFLIFLSTRPSSNTSTPLNFYIFFFFRLHDLLMMGLVLSGCSAATAIGFVGKYGNTHT 159

Query: 143 GWSPICDQFGKFCNRITISIAISYFAVLCLLILTIIS 175
           GWSPIC+ F  FCNR+T SIAISYF+V+CLLILT +S
Sbjct: 160 GWSPICNHFPSFCNRVTASIAISYFSVICLLILTTLS 196

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BLAST of CmaCh10G000330 vs. NCBI nr
Match: gi|590670569|ref|XP_007038092.1| (CASP-like protein GSVIVT01008618001 [Theobroma cacao])

HSP 1 Score: 184.1 bits (466), Expect = 2.2e-43
Identity = 96/163 (58.90%), Postives = 123/163 (75.46%), Query Frame = 1


Query: 18  KLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSSAFKFFAIANAVAC 77
           KL L +QI LR   I++ LAATW ++T+KQ+V++FG   DARYSYSSAFKFFA ANA AC
Sbjct: 18  KLVLGAQICLRIVAIATALAATWVMLTSKQTVMVFGIPFDARYSYSSAFKFFAFANAFAC 77

Query: 78  GFCLLSVCFVFISTRQLALGSRQRNFFF-FVHDLLMMGLVLSGCAAATAIGFVGRYGNTH 137
           GF +LS+ FVF  +R+   G    N+F  F+HDLLMM L LSG AA TAIG+VGR+GN H
Sbjct: 78  GFTVLSLLFVFFFSRR---GLTPANYFLLFLHDLLMMSLALSGVAAGTAIGYVGRFGNIH 137

Query: 138 TGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTK 180
            GW  ICD+ GKFC+++T S+  SY +VLCLL+LTIISA+ ++
Sbjct: 138 AGWLQICDRLGKFCHKVTASLIFSYLSVLCLLVLTIISASKSR 177

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BLAST of CmaCh10G000330 vs. NCBI nr
Match: gi|823183980|ref|XP_012489042.1| (PREDICTED: CASP-like protein 1F1 [Gossypium raimondii])

HSP 1 Score: 179.5 bits (454), Expect = 5.3e-42
Identity = 91/162 (56.17%), Postives = 119/162 (73.46%), Query Frame = 1


Query: 18  KLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSSAFKFFAIANAVAC 77
           KL L +QI LR   IS+  AATWT++ AK++VV+FG   DARY+YSSAFKFFA ANA+AC
Sbjct: 18  KLVLCAQICLRIVAISTAFAATWTIVNAKETVVVFGLQFDARYTYSSAFKFFAFANAIAC 77

Query: 78  GFCLLSVCFVFISTRQLALGSRQRNFFFFVHDLLMMGLVLSGCAAATAIGFVGRYGNTHT 137
           GF  LS+ FV +  R     +    FF F+HDL MM L+LSG AA TAIGFVGRYGN H 
Sbjct: 78  GFTSLSLMFVLLIFRHGRF-TPSNFFFLFLHDLFMMSLILSGVAAGTAIGFVGRYGNNHA 137

Query: 138 GWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTK 180
           GWS ICD+  K+C+++T S+ +SY +V+CL++LT+ISA  ++
Sbjct: 138 GWSEICDRLKKYCDKVTASMVLSYLSVICLVVLTVISAGKSR 178

[Close]

BLAST of CmaCh10G000330 vs. NCBI nr
Match: gi|470122961|ref|XP_004297505.1| (PREDICTED: CASP-like protein 1F1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 177.2 bits (448), Expect = 2.6e-41
Identity = 96/159 (60.38%), Postives = 120/159 (75.47%), Query Frame = 1


Query: 18  KLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYSSAFKFFAIANAVAC 77
           KL+L  QI LR   +++TLAATW  IT+KQS  I G T DARYSYSSAFKF A ANAV  
Sbjct: 19  KLFLGVQIWLRTFAMATTLAATWITITSKQSTEIVGITFDARYSYSSAFKFLAFANAVVS 78

Query: 78  GFCLLSVCFVFISTRQLALGSRQRNFFF-FVHDLLMMGLVLSGCAAATAIGFVGRYGNTH 137
             CL+S+  VF+   Q   GS   ++FF F+HDL +M LVL+GCAAATAIGFVGRYGN+H
Sbjct: 79  ACCLVSLLLVFLLHLQ---GSNPNHYFFLFLHDLFIMCLVLAGCAAATAIGFVGRYGNSH 138

Query: 138 TGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISA 176
           TGWSPICD F KFC+R++IS+ +SY +++ LL+LT+ SA
Sbjct: 139 TGWSPICDHFDKFCHRVSISVILSYLSLIILLMLTVGSA 174

The following BLAST results are available for this feature:

BLAST of CmaCh10G000330 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSPL8_RICCO	8.2e-43	52.51	CASP-like protein 1F1 OS=Ricinus communis GN=RCOM_1504680 PE=2 SV=1	[more]
CSPL4_VITVI	3.5e-41	52.81	CASP-like protein 1F1 OS=Vitis vinifera GN=VIT_17s0000g00560 PE=2 SV=2	[more]
CSPLH_POPTR	2.5e-39	48.33	CASP-like protein 1F1 OS=Populus trichocarpa GN=POPTRDRAFT_824792 PE=2 SV=1	[more]
CSPL3_POPTR	2.3e-37	50.30	CASP-like protein 1F2 OS=Populus trichocarpa GN=POPTRDRAFT_823430 PE=3 SV=1	[more]
CSPLA_RICCO	1.7e-32	42.77	CASP-like protein 1F2 OS=Ricinus communis GN=RCOM_1446020 PE=2 SV=1	[more]

BLAST of CmaCh10G000330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR45_CUCSA	7.0e-49	68.15	CASP-like protein OS=Cucumis sativus GN=Csa_1G000725 PE=3 SV=1	[more]
A0A061FZU4_THECC	1.5e-43	58.90	CASP-like protein OS=Theobroma cacao GN=TCM_014723 PE=3 SV=1	[more]
A0A0D2QLF2_GOSRA	3.7e-42	56.17	CASP-like protein OS=Gossypium raimondii GN=B456_007G044200 PE=3 SV=1	[more]
A0A0D2T599_GOSRA	2.3e-39	50.28	CASP-like protein OS=Gossypium raimondii GN=B456_006G272700 PE=3 SV=1	[more]
V4TAA7_9ROSI	6.6e-39	53.05	CASP-like protein OS=Citrus clementina GN=CICLE_v10032880mg PE=3 SV=1	[more]

BLAST of CmaCh10G000330 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25040.1	1.9e-21	34.16	Uncharacterised protein family (UPF0497)	[more]
AT4G15630.1	1.7e-17	33.54	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	3.8e-14	29.12	Uncharacterised protein family (UPF0497)	[more]
AT4G03540.1	6.5e-14	33.33	Uncharacterised protein family (UPF0497)	[more]
AT1G14160.1	3.2e-13	34.19	Uncharacterised protein family (UPF0497)	[more]

BLAST of CmaCh10G000330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128806\|ref\|XP_008464379.1\|	1.1e-50	64.29	PREDICTED: CASP-like protein POPTRDRAFT_823430 [Cucumis melo]	[more]
gi\|449440951\|ref\|XP_004138247.1\|	1.0e-48	68.15	PREDICTED: CASP-like protein 1F2 [Cucumis sativus]	[more]
gi\|590670569\|ref\|XP_007038092.1\|	2.2e-43	58.90	CASP-like protein GSVIVT01008618001 [Theobroma cacao]	[more]
gi\|823183980\|ref\|XP_012489042.1\|	5.3e-42	56.17	PREDICTED: CASP-like protein 1F1 [Gossypium raimondii]	[more]
gi\|470122961\|ref\|XP_004297505.1\|	2.6e-41	60.38	PREDICTED: CASP-like protein 1F1 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006459	CASP/CASPL
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G000330.1	CmaCh10G000330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAMs	TIGR01569	TIGR01569	coord: 25..175 score: 1.5
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 23..166 score: 2.6
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 5..175 score: 1.5
None	No IPR available	PANTHER	PTHR11615:SF157	SUBFAMILY NOT NAMED	coord: 5..175 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh10G000330	Cucsa.157040	Cucumber (Gy14) v1	cgycmaB0433
CmaCh10G000330	Cla019308	Watermelon (97103) v1	cmawmB072
CmaCh10G000330	MELO3C026176	Melon (DHL92) v3.5.1	cmameB065
CmaCh10G000330	ClCG06G018210	Watermelon (Charleston Gray)	cmawcgB072
CmaCh10G000330	CSPI01G00230	Wild cucumber (PI 183967)	cmacpiB049
CmaCh10G000330	CmoCh10G000290	Cucurbita moschata (Rifu)	cmacmoB067
CmaCh10G000330	Lsi06G016690	Bottle gourd (USVL1VR-Ls)	cmalsiB072
CmaCh10G000330	Cp4.1LG18g09260	Cucurbita pepo (Zucchini)	cmacpeB080
CmaCh10G000330	MELO3C026176.2	Melon (DHL92) v3.6.1	cmamedB068
CmaCh10G000330	CsaV3_1G000220	Cucumber (Chinese Long) v3	cmacucB0058
CmaCh10G000330	Cla97C06G127980	Watermelon (97103) v2	cmawmbB082
CmaCh10G000330	CsGy1G000230	Cucumber (Gy14) v2	cgybcmaB004

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh10G000330	Cucumber (Chinese Long) v3	cmacucB0078
CmaCh10G000330	Cucumber (Chinese Long) v3	cmacucB0085
CmaCh10G000330	Watermelon (97103) v2	cmawmbB068
CmaCh10G000330	Wax gourd	cmawgoB0080
CmaCh10G000330	Wax gourd	cmawgoB0066
CmaCh10G000330	Cucurbita maxima (Rimu)	cmacmaB092
CmaCh10G000330	Cucurbita maxima (Rimu)	cmacmaB073
CmaCh10G000330	Cucurbita maxima (Rimu)	cmacmaB101
CmaCh10G000330	Cucurbita moschata (Rifu)	cmacmoB069
CmaCh10G000330	Cucurbita moschata (Rifu)	cmacmoB084
CmaCh10G000330	Wild cucumber (PI 183967)	cmacpiB063
CmaCh10G000330	Cucumber (Chinese Long) v2	cmacuB048
CmaCh10G000330	Cucumber (Chinese Long) v2	cmacuB071
CmaCh10G000330	Melon (DHL92) v3.5.1	cmameB051
CmaCh10G000330	Watermelon (Charleston Gray)	cmawcgB061
CmaCh10G000330	Watermelon (97103) v1	cmawmB053
CmaCh10G000330	Cucurbita pepo (Zucchini)	cmacpeB082
CmaCh10G000330	Cucurbita pepo (Zucchini)	cmacpeB094
CmaCh10G000330	Bottle gourd (USVL1VR-Ls)	cmalsiB056
CmaCh10G000330	Cucumber (Gy14) v2	cgybcmaB025
CmaCh10G000330	Cucumber (Gy14) v2	cgybcmaB289
CmaCh10G000330	Melon (DHL92) v3.6.1	cmamedB053
CmaCh10G000330	Silver-seed gourd	carcmaB0510
CmaCh10G000330	Silver-seed gourd	carcmaB0686
CmaCh10G000330	Silver-seed gourd	carcmaB0853