CmaCh09G009570 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G009570
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionGeranylgeranyl pyrophosphate synthase
LocationCma_Chr09 : 4818898 .. 4819812 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATTTCTCTCAATCTTCTGCAACTTCATGGAAATCCATCACTACCCAAGTTCCCAAACTCGAATTGGCTCCGTCCGGCGGTTTATTTCAGAGCTCCGATGAGGGCGACGGTGGTCATGTCGCAGATCACTCCGTCGTACTGGGCGGCGATAAATGAAGATATTGAGGAACATCTCCGGCGGATCATTATTGCGAAGGACCCACCGGTAGTATACGAGCCATTGGGTCATTTTGTCTTCTCCGCCCCACGAAATTCCGCTGCAGCAATGTGTATTGCTGCCTGCGAGTTCGTCGGCGGCCATCGGGACCAAGCTATGGCGGCGGCTACCGCACTTCAGCTCATCTATGCAGCTACATATACTCGGGAGTATCCTCCACTGACGGCGCGTGGGAGTTCAAACGCCGCTATGGTTGACCGTGTTTATGCCCCCAACATTCAGCTGCTGACTGGTGTTGGAATAGCTCCGATTGGGTTTGAGATTCTGGCTGGGTCGTGTGACTTGAGCGAGAGTGGGTCGGACCGGGTTCGCCGCGTGATGGGGGAAATGGCTCGGGCGATGGGGTCGGAGGGGTGGATTGGGGGACAATTCAAGGAATTAGAGGAGGTGACGGCGGCAGCGGAGGCGGAGGAAGTTATCGAGAAAACGGAAGGTGAGCTACACGCGCGTGGAGGCGCGTGTGGGGCAATATTGGGAAGTGGAAGTGAAGAGGAAATAGAGAAGATGAGGAAATATGGAAGAATTGTGGGAATGGTGAAGGGATTGTCAAAGAAAGTGTTTGGAGGGAAAGAAAATGAGAGAAAAAGAGAGAAAATTAAGGAGTTGAAGGCTTTGGCTTTCAAGGAATTGGAGGGTTTCAAAGGAGAAAAAGTGGATCAAATGTGTAATTTCTTCGATTTCGAGGGGCTTTAG

mRNA sequence

ATGGCGATTTCTCTCAATCTTCTGCAACTTCATGGAAATCCATCACTACCCAAGTTCCCAAACTCGAATTGGCTCCGTCCGGCGGTTTATTTCAGAGCTCCGATGAGGGCGACGGTGGTCATGTCGCAGATCACTCCGTCGTACTGGGCGGCGATAAATGAAGATATTGAGGAACATCTCCGGCGGATCATTATTGCGAAGGACCCACCGGTAGTATACGAGCCATTGGGTCATTTTGTCTTCTCCGCCCCACGAAATTCCGCTGCAGCAATGTGTATTGCTGCCTGCGAGTTCGTCGGCGGCCATCGGGACCAAGCTATGGCGGCGGCTACCGCACTTCAGCTCATCTATGCAGCTACATATACTCGGGAGTATCCTCCACTGACGGCGCGTGGGAGTTCAAACGCCGCTATGGTTGACCGTGTTTATGCCCCCAACATTCAGCTGCTGACTGGTGTTGGAATAGCTCCGATTGGGTTTGAGATTCTGGCTGGGTCGTGTGACTTGAGCGAGAGTGGGTCGGACCGGGTTCGCCGCGTGATGGGGGAAATGGCTCGGGCGATGGGGTCGGAGGGGTGGATTGGGGGACAATTCAAGGAATTAGAGGAGGTGACGGCGGCAGCGGAGGCGGAGGAAGTTATCGAGAAAACGGAAGGTGAGCTACACGCGCGTGGAGGCGCGTGTGGGGCAATATTGGGAAGTGGAAGTGAAGAGGAAATAGAGAAGATGAGGAAATATGGAAGAATTGTGGGAATGGTGAAGGGATTGTCAAAGAAAGTGTTTGGAGGGAAAGAAAATGAGAGAAAAAGAGAGAAAATTAAGGAGTTGAAGGCTTTGGCTTTCAAGGAATTGGAGGGTTTCAAAGGAGAAAAAGTGGATCAAATGTGTAATTTCTTCGATTTCGAGGGGCTTTAG

Coding sequence (CDS)

ATGGCGATTTCTCTCAATCTTCTGCAACTTCATGGAAATCCATCACTACCCAAGTTCCCAAACTCGAATTGGCTCCGTCCGGCGGTTTATTTCAGAGCTCCGATGAGGGCGACGGTGGTCATGTCGCAGATCACTCCGTCGTACTGGGCGGCGATAAATGAAGATATTGAGGAACATCTCCGGCGGATCATTATTGCGAAGGACCCACCGGTAGTATACGAGCCATTGGGTCATTTTGTCTTCTCCGCCCCACGAAATTCCGCTGCAGCAATGTGTATTGCTGCCTGCGAGTTCGTCGGCGGCCATCGGGACCAAGCTATGGCGGCGGCTACCGCACTTCAGCTCATCTATGCAGCTACATATACTCGGGAGTATCCTCCACTGACGGCGCGTGGGAGTTCAAACGCCGCTATGGTTGACCGTGTTTATGCCCCCAACATTCAGCTGCTGACTGGTGTTGGAATAGCTCCGATTGGGTTTGAGATTCTGGCTGGGTCGTGTGACTTGAGCGAGAGTGGGTCGGACCGGGTTCGCCGCGTGATGGGGGAAATGGCTCGGGCGATGGGGTCGGAGGGGTGGATTGGGGGACAATTCAAGGAATTAGAGGAGGTGACGGCGGCAGCGGAGGCGGAGGAAGTTATCGAGAAAACGGAAGGTGAGCTACACGCGCGTGGAGGCGCGTGTGGGGCAATATTGGGAAGTGGAAGTGAAGAGGAAATAGAGAAGATGAGGAAATATGGAAGAATTGTGGGAATGGTGAAGGGATTGTCAAAGAAAGTGTTTGGAGGGAAAGAAAATGAGAGAAAAAGAGAGAAAATTAAGGAGTTGAAGGCTTTGGCTTTCAAGGAATTGGAGGGTTTCAAAGGAGAAAAAGTGGATCAAATGTGTAATTTCTTCGATTTCGAGGGGCTTTAG

Protein sequence

MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHLRRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAATYTREYPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRVMGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEIEKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCNFFDFEGL
Homology
[Close]
BLAST of CmaCh09G009570 vs. Swiss-Prot
Match: GGR_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana GN=GGR PE=1 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 2.5e-20
Identity = 88/321 (27.41%), Postives = 145/321 (45.17%), Query Frame = 1 

Query: 1   MAISLNLLQLHGNPSLPKFPNS--NWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEE 60
           M  S + + L    SLP+ P++    L PA    +   A   ++    +YW  +  +I +
Sbjct: 1   MLFSGSAIPLSSFCSLPEKPHTLPMKLSPAAIRSSSSSAPGSLNFDLRTYWTTLITEINQ 60

Query: 61  HLRRIIIAKDPPVVYEPLGHFVFS-APRNSAAAMCIAACEFVGGHRDQAMAAATALQLIY 120
            L   I  K P  +YE + + V +   + +   MC+AACE  GG R  A   A AL++++
Sbjct: 61  KLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVH 120

Query: 121 AATYTREYPPL-----TARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSES 180
           AA+   +  P        RG  +      VY   + +L G  + P+ F+ +         
Sbjct: 121 AASLIHDDLPCMDDDPVRRGKPSN---HTVYGSGMAILAGDALFPLAFQHIVSHTPPDLV 180

Query: 181 GSDRVRRVMGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAIL 240
               + R++ E+AR +GS G   GQ+ +LE          V EK  G +      CG +L
Sbjct: 181 PRATILRLITEIARTVGSTGMAAGQYVDLEG--GPFPLSFVQEKKFGAMGECSAVCGGLL 240

Query: 241 GSGSEEEIEKMRKYGRIVGMVKGL-------SKKVFGGKENERKREKIKELKALAFKELE 300
           G  +E+E++ +R+YGR VGM+  +        KK + G   +   E  +ELK  A KEL+
Sbjct: 241 GGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKGMMEMAEELKEKAKKELQ 300

Query: 301 GFK-----GEKVDQMCNFFDF 302
            F      G+ +  +  F D+
Sbjct: 301 VFDNKYGGGDTLVPLYTFVDY 316

[Close]
BLAST of CmaCh09G009570 vs. Swiss-Prot
Match: GGPPS_HEVBR (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis GN=GGPS PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.7e-16
Identity = 77/279 (27.60%), Postives = 130/279 (46.59%), Query Frame = 1 

Query: 47  SYWAAINEDIEEHLRRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQA 106
           SY       I + L   I  ++P  ++E + + + +  +    A+C+AACE VGG+   A
Sbjct: 81  SYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMA 140

Query: 107 MAAATALQLIYAATYTREYPPLTARGSSNAAMVDR--VYAPNIQLLTGVGIAPIGFEILA 166
           M AA A+++I+  +   +  P                V+  ++ +L G  +    FE +A
Sbjct: 141 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIA 200

Query: 167 GSCDLSESGSDRVRRVMGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTE------ 226
            S  L+ S S R+ R +GE+A+A+G+EG + GQ   + ++ +   +E  +EK E      
Sbjct: 201 VST-LNVS-SARIVRAVGELAKAIGAEGLVAGQ---VVDINSEGSSEVDLEKLEFIHIHK 260

Query: 227 -GELHARGGACGAILGSGSEEEIEKMRKYGRIVGMV------------------KGLSKK 286
             +L       GAILG G++EE+EK+RKY R +G++                  K   K 
Sbjct: 261 TAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKD 320

Query: 287 VFGGKEN-------ERKREKIKELKALAFKELEGFKGEK 292
           +   K         E+ RE  ++L   A ++L GF  EK
Sbjct: 321 LVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEK 354

[Close]
BLAST of CmaCh09G009570 vs. Swiss-Prot
Match: GGPP7_ARATH (Geranylgeranyl pyrophosphate synthase 7, chloroplastic OS=Arabidopsis thaliana GN=At2g18620 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.9e-16
Identity = 63/216 (29.17%), Postives = 108/216 (50.00%), Query Frame = 1 

Query: 47  SYWAAINEDIEEHLRRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQA 106
           SY       + E L   +  ++P  ++E + + + +  +     +CIAACE VGG    A
Sbjct: 57  SYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVA 116

Query: 107 MAAATALQLIYAATYTREYPPLTARGSSNAAMVD--RVYAPNIQLLTGVGIAPIGFEILA 166
           + AA A+++I+  +   +  P               +V+  ++ +L G  +    FE LA
Sbjct: 117 LPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLA 176

Query: 167 GSCDLSESGSDRVRRVMGEMARAMGSEGWIGGQFKEL-----EEVTAAAEAEEVIE--KT 226
            S  +S +   RV R +GE+A+A+GS+G + GQ  +L     ++     E  E I   KT
Sbjct: 177 TSTAVSPA---RVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKT 236

Query: 227 EGELHARGGACGAILGSGSEEEIEKMRKYGRIVGMV 254
              L A     GAI+G GS+EE+EK+R++ R +G++
Sbjct: 237 AVLLEA-ATVLGAIVGGGSDEEVEKLRRFARCIGLL 268

[Close]
BLAST of CmaCh09G009570 vs. Swiss-Prot
Match: GGPP2_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2 OS=Arabidopsis thaliana GN=GGPPS2 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 4.2e-15
Identity = 71/281 (25.27%), Postives = 126/281 (44.84%), Query Frame = 1 

Query: 48  YWAAINEDIEEHLRRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAM 107
           Y  +  E + + L   I   +P  ++E + + + +A +     +C+A+CE VGG  + AM
Sbjct: 88  YMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAM 147

Query: 108 AAATALQLIYAATYTREYPPLTARGS--SNAAMVDRVYAPNIQLLTGVGIAPIGFEILAG 167
            AA A+++I+  +  ++  P               +VY   + +L+G  +  + FE +  
Sbjct: 148 PAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT- 207

Query: 168 SCDLSESGSDRVRRVMGEMARAMGSEGWIGGQFKELEEVTAAAEAEEV---------IEK 227
               +E  S+R+   + E+AR++G+ G + GQ  ++   +   +  EV         + K
Sbjct: 208 ---TAEISSERMVWAVRELARSIGTRGLVAGQAMDIS--SEGLDLNEVGLEHLEFIHVHK 267

Query: 228 TEGELHARGGACGAILGSGSEEEIEKMRKYGRIVGMV------------------KGLSK 287
           T   L       GAI+G GS+EEIE +RK+ R +G++                  K   K
Sbjct: 268 T-AVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGK 327

Query: 288 KVFGGKEN-------ERKREKIKELKALAFKELEGFKGEKV 293
               GK         E+ +E +K L   A + L+GF  EKV
Sbjct: 328 DQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKV 361

[Close]
BLAST of CmaCh09G009570 vs. Swiss-Prot
Match: GGPPS_CAPAN (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.1e-15
Identity = 69/278 (24.82%), Postives = 128/278 (46.04%), Query Frame = 1 

Query: 56  IEEHLRRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQL 115
           + + L   II K+P V++E + + + +  +     +C+AACE VGG+++ AMAAA A+++
Sbjct: 89  VNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQENAMAAACAVEM 148

Query: 116 IYAATYTREYPPLTARGSSNAAMV--DRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESG 175
           I+  +   +  P               ++Y  ++ +L G  +    FE +  S   +   
Sbjct: 149 IHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNS--TAGVT 208

Query: 176 SDRVRRVMGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIE-----KTEGELHARGGAC 235
             R+   + E+A+++G+EG + GQ  +++    A+ + E +E     KT   L +     
Sbjct: 209 PSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAALLES-SVVL 268

Query: 236 GAILGSGSEEEIEKMRKYGRIVGMV------------------KGLSKKVFGGKEN---- 295
           GAILG G+  E+EK+R++ R +G++                  K   K +   K      
Sbjct: 269 GAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKL 328

Query: 296 ---ERKREKIKELKALAFKELEGFKGEKVDQMCNFFDF 302
              E+ +E   EL   A ++LEGF   K   +    D+
Sbjct: 329 LGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIALADY 363

[Close]
BLAST of CmaCh09G009570 vs. TrEMBL
Match: A0A0A0K8P9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G211090 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 6.5e-116
Identity = 223/301 (74.09%), Postives = 249/301 (82.72%), Query Frame = 1 

Query: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHL 60
           MAISLNLLQL  N + PKF  +N L P  Y R P R+  VMSQITPSYWAAINEDIE+HL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60

Query: 61  RRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAAT 120
           RR+I  KDP  VYEPLGHF+FSAPRNSA A+CIAACE VGGHRDQAMAAATA+QLIYAAT
Sbjct: 61  RRVIPVKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120

Query: 121 YTREYPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRV 180
            T EYPPLTARG   A++VDRVY  N+QL+TG GI P+GFEILA SCD SE GS+RVRRV
Sbjct: 121 CTHEYPPLTARG-KRASVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180

Query: 181 MGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEI 240
           M E+ARAMG+EGWIGGQF+ LEE    A  EEVIEKTEG LHA GGACGAI+G G+EEEI
Sbjct: 181 MVEVARAMGTEGWIGGQFRGLEE---EATVEEVIEKTEGGLHACGGACGAIMGGGNEEEI 240

Query: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCNFFD 300
           EKMRKYG++VG+VKGL++ VFGGKENERKREKI+ELK LAFKELEGF GE V Q+  F D
Sbjct: 241 EKMRKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLD 297

Query: 301 F 302
           F
Sbjct: 301 F 297

[Close]
BLAST of CmaCh09G009570 vs. TrEMBL
Match: A0A067KSE3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00898 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.8e-58
Identity = 132/294 (44.90%), Postives = 191/294 (64.97%), Query Frame = 1 

Query: 10  LHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHLRRIIIAKDP 69
           +H NP+   F   N  RP +     M +    ++   SYW +IN DI+ HL++ I  + P
Sbjct: 10  IHLNPTARMFSKPNPNRPFLSTAKSMVSFATSNKNHQSYWTSINADIDTHLKQAIPIRPP 69

Query: 70  PVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAATYTREYPPLT 129
            VV+EP+ H  F+AP  +A A+C+AACE VGG RDQA+AAA+AL L++A+ +T E  P+T
Sbjct: 70  LVVFEPMHHLTFAAPETTAPALCMAACELVGGQRDQAVAAASALHLLHASAFTHENIPVT 129

Query: 130 AR-GSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRVMGEMARAM 189
            R  SS+  + D  Y PNI+LLTG G+ P  FE+LA   +L+++ +DRV RV+ E++RA+
Sbjct: 130 DRPRSSSRPVFDHAYEPNIELLTGDGMTPFAFELLARFDNLAQNDADRVLRVIIEISRAV 189

Query: 190 GSEGWIGGQFKEL-------EEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEIE 249
           GS+G + GQ+ EL       ++   AA  + V  K +GELHA   ACGAILG GSEEE+E
Sbjct: 190 GSQGVVEGQYNELRYDESNGKKSFNAAWLDNVCRKKDGELHACAAACGAILGGGSEEEME 249

Query: 250 KMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQM 296
           K+R+YG  VGM++G+  +   G+ NE+  +K+ ELK LA KEL+ F  EKV ++
Sbjct: 250 KLRRYGLYVGMIEGIFNR---GERNEKWLQKVNELKNLALKELKDFNQEKVKKI 300

[Close]
BLAST of CmaCh09G009570 vs. TrEMBL
Match: A0A0G3BEA5_PAELC (Chloroplast heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Paeonia lactiflora PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 8.1e-58
Identity = 140/293 (47.78%), Postives = 188/293 (64.16%), Query Frame = 1 

Query: 7   LLQLHGN-PSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHLRRIII 66
           LL ++G  PSL     S   RP   ++ PMR ++  +    SYWA I+ DIE HL++ I 
Sbjct: 5   LLHINGTKPSLLTLSRSKPHRPLFSYK-PMRVSMSHNS---SYWATIDSDIEAHLKQAIP 64

Query: 67  AKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAATYTREY 126
            + P VV+EP+ H  F+AP+N+A A+CIA CE VGGHRDQA+AAA+AL LI+AA +T E+
Sbjct: 65  VRPPLVVFEPMHHLTFAAPKNTAPALCIATCELVGGHRDQAIAAASALHLIHAAAFTHEH 124

Query: 127 PPLTARG---SSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRVMG 186
            PLT R    SS   ++   + PNI+LLTG GI P G+E+LA S D S   SDRV RV+ 
Sbjct: 125 LPLTDRPTPISSRPGLIHHAFNPNIELLTGDGIHPFGYELLARSDDPSGDNSDRVLRVII 184

Query: 187 EMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEIEK 246
           E+ RA GS+G+I GQ++E    T    A  V EK EG L+    ACGAILG GSEEEIEK
Sbjct: 185 EITRATGSQGYIDGQYRE----TLGDVAVNVCEKKEGSLYGCAAACGAILGGGSEEEIEK 244

Query: 247 MRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQM 296
           +RKYG  VGM++G+   V  G+  +   + +  L+ LA KEL+ F   KV+++
Sbjct: 245 LRKYGFYVGMIQGMLYGV--GRNTKGSMDVVIGLRDLALKELKYFDQAKVEKI 287

[Close]
BLAST of CmaCh09G009570 vs. TrEMBL
Match: A0A0D2NK44_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G089600 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 6.8e-57
Identity = 134/300 (44.67%), Postives = 184/300 (61.33%), Query Frame = 1 

Query: 7   LLQLHGNP--SLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHLRRII 66
           L  +HGNP   +P  P      P+     P R   V      SYW +IN DIE HL++ I
Sbjct: 5   LSHIHGNPIFHVPYTPIPTRQCPS---NLPCRLFKVTMSSNQSYWTSINADIEAHLKQAI 64

Query: 67  IAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAATYTRE 126
             ++P  V+EP+ H  FSAPR++A A+C+AACE VGGHRDQA+ AA+ALQL+YAA++  E
Sbjct: 65  PVREPLSVFEPMNHLTFSAPRSTAPALCVAACELVGGHRDQALPAASALQLMYAASFAHE 124

Query: 127 YPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRVMGEM 186
           + PLT +     + +  +Y PNI+LL G  + P G E+LA S D ++  SDRV RVM E+
Sbjct: 125 HLPLT-QSCRPKSEIQHLYGPNIELLIGDAMIPFGLELLAVSNDSTQKNSDRVLRVMVEI 184

Query: 187 ARAMGSEGWIGGQFKELE-EVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEIEKM 246
            RA+GS+G + GQ+ E+E E +   + E   EK EG LH    ACGAILG GSE EIEKM
Sbjct: 185 TRAIGSQGMVHGQYYEVEYESSCIRQNERASEKYEGTLHGCAAACGAILGGGSEVEIEKM 244

Query: 247 RKYGRIVGMVKGLSKKVFGGKENERKREKIKEL----KALAFKELEGFKGEKVDQMCNFF 300
           R+YG  +G ++G+ ++      +ERK + +KEL    + LA  EL GF   KV+ +   F
Sbjct: 245 RRYGVYIGKIQGMIRR------DERKSKDLKELVEETRKLATNELSGFNEAKVEAISKLF 294

[Close]
BLAST of CmaCh09G009570 vs. TrEMBL
Match: A0A061F5K1_THECC (Geranyl-diphosphate synthase, putative OS=Theobroma cacao GN=TCM_030862 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.7e-55
Identity = 133/303 (43.89%), Postives = 189/303 (62.38%), Query Frame = 1 

Query: 7   LLQLHGNPSL--PKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHLRRII 66
           L  ++GNP L  P  PN     P  Y   PM  T+  +Q   SYWA+IN DIE HL++ I
Sbjct: 5   LSHINGNPLLQVPCRPN-----PMPY--KPMMVTMSCNQ---SYWASINADIEAHLKQAI 64

Query: 67  IAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAATYTRE 126
             ++P  V +P+ H  F+ P+N+A A+C+AACE VGGHRDQA+ AA+AL L+YAA++T E
Sbjct: 65  PVREPLSVSQPMHHLTFACPKNTAPALCVAACELVGGHRDQALPAASALHLMYAASFTHE 124

Query: 127 YPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRVMGEM 186
             PLT + S   + +   Y PNI+LL G  + P G E+LA S D + + S+RV RVM E+
Sbjct: 125 QLPLT-QSSRPRSTIQHAYGPNIELLIGDAMIPSGLELLARSDDPAHTDSERVLRVMVEI 184

Query: 187 ARAMGSEGWIGGQFKELE-------EVTAAAEAEEVIEKTEGELHARGGACGAILGSGSE 246
            RA GS+G I GQ+ E+E       E +   E E + EK EG LHA   ACGAI+G GSE
Sbjct: 185 TRATGSQGMIHGQYYEVERCQSGNKEASYMVEIERISEKYEGALHACAAACGAIVGGGSE 244

Query: 247 EEIEKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCN 301
           EEIEKMR+YG  +G ++G+  ++     ++   + ++EL+ LA +EL+GF   K+  + +
Sbjct: 245 EEIEKMRRYGLYIGKIQGMLNRI--RSHDQELNKLVEELRNLASRELQGFYEAKIAAISS 294

[Close]
BLAST of CmaCh09G009570 vs. TAIR10
Match: AT4G38460.1 (AT4G38460.1 geranylgeranyl reductase)

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-21
Identity = 88/321 (27.41%), Postives = 145/321 (45.17%), Query Frame = 1 

Query: 1   MAISLNLLQLHGNPSLPKFPNS--NWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEE 60
           M  S + + L    SLP+ P++    L PA    +   A   ++    +YW  +  +I +
Sbjct: 1   MLFSGSAIPLSSFCSLPEKPHTLPMKLSPAAIRSSSSSAPGSLNFDLRTYWTTLITEINQ 60

Query: 61  HLRRIIIAKDPPVVYEPLGHFVFS-APRNSAAAMCIAACEFVGGHRDQAMAAATALQLIY 120
            L   I  K P  +YE + + V +   + +   MC+AACE  GG R  A   A AL++++
Sbjct: 61  KLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVH 120

Query: 121 AATYTREYPPL-----TARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSES 180
           AA+   +  P        RG  +      VY   + +L G  + P+ F+ +         
Sbjct: 121 AASLIHDDLPCMDDDPVRRGKPSN---HTVYGSGMAILAGDALFPLAFQHIVSHTPPDLV 180

Query: 181 GSDRVRRVMGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAIL 240
               + R++ E+AR +GS G   GQ+ +LE          V EK  G +      CG +L
Sbjct: 181 PRATILRLITEIARTVGSTGMAAGQYVDLEG--GPFPLSFVQEKKFGAMGECSAVCGGLL 240

Query: 241 GSGSEEEIEKMRKYGRIVGMVKGL-------SKKVFGGKENERKREKIKELKALAFKELE 300
           G  +E+E++ +R+YGR VGM+  +        KK + G   +   E  +ELK  A KEL+
Sbjct: 241 GGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKGMMEMAEELKEKAKKELQ 300

Query: 301 GFK-----GEKVDQMCNFFDF 302
            F      G+ +  +  F D+
Sbjct: 301 VFDNKYGGGDTLVPLYTFVDY 316

[Close]
BLAST of CmaCh09G009570 vs. TAIR10
Match: AT2G18620.1 (AT2G18620.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-17
Identity = 63/216 (29.17%), Postives = 108/216 (50.00%), Query Frame = 1 

Query: 47  SYWAAINEDIEEHLRRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQA 106
           SY       + E L   +  ++P  ++E + + + +  +     +CIAACE VGG    A
Sbjct: 57  SYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVA 116

Query: 107 MAAATALQLIYAATYTREYPPLTARGSSNAAMVD--RVYAPNIQLLTGVGIAPIGFEILA 166
           + AA A+++I+  +   +  P               +V+  ++ +L G  +    FE LA
Sbjct: 117 LPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLA 176

Query: 167 GSCDLSESGSDRVRRVMGEMARAMGSEGWIGGQFKEL-----EEVTAAAEAEEVIE--KT 226
            S  +S +   RV R +GE+A+A+GS+G + GQ  +L     ++     E  E I   KT
Sbjct: 177 TSTAVSPA---RVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKT 236

Query: 227 EGELHARGGACGAILGSGSEEEIEKMRKYGRIVGMV 254
              L A     GAI+G GS+EE+EK+R++ R +G++
Sbjct: 237 AVLLEA-ATVLGAIVGGGSDEEVEKLRRFARCIGLL 268

[Close]
BLAST of CmaCh09G009570 vs. TAIR10
Match: AT2G23800.1 (AT2G23800.1 geranylgeranyl pyrophosphate synthase 2)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-16
Identity = 71/281 (25.27%), Postives = 126/281 (44.84%), Query Frame = 1 

Query: 48  YWAAINEDIEEHLRRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAM 107
           Y  +  E + + L   I   +P  ++E + + + +A +     +C+A+CE VGG  + AM
Sbjct: 88  YMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAM 147

Query: 108 AAATALQLIYAATYTREYPPLTARGS--SNAAMVDRVYAPNIQLLTGVGIAPIGFEILAG 167
            AA A+++I+  +  ++  P               +VY   + +L+G  +  + FE +  
Sbjct: 148 PAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT- 207

Query: 168 SCDLSESGSDRVRRVMGEMARAMGSEGWIGGQFKELEEVTAAAEAEEV---------IEK 227
               +E  S+R+   + E+AR++G+ G + GQ  ++   +   +  EV         + K
Sbjct: 208 ---TAEISSERMVWAVRELARSIGTRGLVAGQAMDIS--SEGLDLNEVGLEHLEFIHVHK 267

Query: 228 TEGELHARGGACGAILGSGSEEEIEKMRKYGRIVGMV------------------KGLSK 287
           T   L       GAI+G GS+EEIE +RK+ R +G++                  K   K
Sbjct: 268 T-AVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGK 327

Query: 288 KVFGGKEN-------ERKREKIKELKALAFKELEGFKGEKV 293
               GK         E+ +E +K L   A + L+GF  EKV
Sbjct: 328 DQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKV 361

[Close]
BLAST of CmaCh09G009570 vs. TAIR10
Match: AT4G36810.1 (AT4G36810.1 geranylgeranyl pyrophosphate synthase 1)

HSP 1 Score: 82.4 bits (202), Expect = 5.2e-16
Identity = 74/282 (26.24%), Postives = 128/282 (45.39%), Query Frame = 1 

Query: 47  SYWAAINEDIEEHLRRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQA 106
           SY     E + + L   +  ++P  ++E + + + +  +     +CIAACE VGG    A
Sbjct: 78  SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137

Query: 107 MAAATALQLIYAATYTREYPPLTARGSSNAAMV--DRVYAPNIQLLTGVGIAPIGFEILA 166
           M AA A+++I+  +   +  P               +V+  ++ +L G  +    FE LA
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLA 197

Query: 167 GSCDLSESGSDRVRRVMGEMARAMGSEGWIGGQFKELEEVTAAAEAEEV---------IE 226
            +         RV R +GE+A+A+G+EG + GQ  ++   +   +  +V         + 
Sbjct: 198 SATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDIS--SEGLDLNDVGLEHLEFIHLH 257

Query: 227 KTEGELHARGGACGAILGSGSEEEIEKMRKYGRIVGMVKGL---------SKKVFG---G 286
           KT   L A     GAI+G GS++EIE++RK+ R +G++  +         S K  G   G
Sbjct: 258 KTAALLEA-SAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAG 317

Query: 287 KE-------------NERKREKIKELKALAFKELEGFKGEKV 293
           K+              E+ RE  ++L   A  +L GF  +KV
Sbjct: 318 KDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKV 356

[Close]
BLAST of CmaCh09G009570 vs. TAIR10
Match: AT3G32040.1 (AT3G32040.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-15
Identity = 79/283 (27.92%), Postives = 128/283 (45.23%), Query Frame = 1 

Query: 47  SYWAAINEDIEEHLRRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQA 106
           SY     E +   L   +  +DP  + E + + + +  +     +CIAACE VGG    A
Sbjct: 68  SYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATA 127

Query: 107 MAAATALQLIYAATYTREYPPL--TARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILA 166
           M+AA A+++I+ ++   +  P    A          +V+  ++ +L G  +  + FE + 
Sbjct: 128 MSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMT 187

Query: 167 GSCDLSESG---SDRVRRVMGEMARAMGSEGWIGGQFKE-----LEEVTAAAEAEEVI-- 226
               +  SG    +R+ R + E+A+A+G++G + GQ  +     L       E  E I  
Sbjct: 188 ----VVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHL 247

Query: 227 EKTEGELHARGGACGAILGSGSEEEIEKMRKYGRIVGMV------------------KGL 286
            KT   L A     GAI+G G+EEEI+K+RKYGR +G++                  K  
Sbjct: 248 HKTAALLEA-AAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTA 307

Query: 287 SKKVFGGKEN-------ERKREKIKELKALAFKELEGFKGEKV 293
            K V   K         ER RE  ++L+  A ++L GF   KV
Sbjct: 308 GKDVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKV 345

[Close]
BLAST of CmaCh09G009570 vs. NCBI nr
Match: gi|449444204|ref|XP_004139865.1| (PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 425.2 bits (1092), Expect = 9.3e-116
Identity = 223/301 (74.09%), Postives = 249/301 (82.72%), Query Frame = 1 

Query: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHL 60
           MAISLNLLQL  N + PKF  +N L P  Y R P R+  VMSQITPSYWAAINEDIE+HL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60

Query: 61  RRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAAT 120
           RR+I  KDP  VYEPLGHF+FSAPRNSA A+CIAACE VGGHRDQAMAAATA+QLIYAAT
Sbjct: 61  RRVIPVKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120

Query: 121 YTREYPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRV 180
            T EYPPLTARG   A++VDRVY  N+QL+TG GI P+GFEILA SCD SE GS+RVRRV
Sbjct: 121 CTHEYPPLTARG-KRASVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180

Query: 181 MGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEI 240
           M E+ARAMG+EGWIGGQF+ LEE    A  EEVIEKTEG LHA GGACGAI+G G+EEEI
Sbjct: 181 MVEVARAMGTEGWIGGQFRGLEE---EATVEEVIEKTEGGLHACGGACGAIMGGGNEEEI 240

Query: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCNFFD 300
           EKMRKYG++VG+VKGL++ VFGGKENERKREKI+ELK LAFKELEGF GE V Q+  F D
Sbjct: 241 EKMRKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLD 297

Query: 301 F 302
           F
Sbjct: 301 F 297

[Close]
BLAST of CmaCh09G009570 vs. NCBI nr
Match: gi|1009111162|ref|XP_015899572.1| (PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 253.8 bits (647), Expect = 3.7e-64
Identity = 151/301 (50.17%), Postives = 200/301 (66.45%), Query Frame = 1 

Query: 8   LQLHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHLRRIIIAK 67
           + LHG+P +     SN  RP++ + +PM   + MSQ   S+W++IN DIE HL++ I  +
Sbjct: 5   IHLHGHPRVYNLFVSNPNRPSLCY-SPM--IITMSQQDQSHWSSINADIEAHLKQAIPLR 64

Query: 68  DPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAATYTREYPP 127
            P  V+EP+ HF FSAP+N+A A+CIAACE VGGHRDQAMAAA+AL L++AAT+T E  P
Sbjct: 65  PPLSVFEPVHHFTFSAPKNTAPALCIAACELVGGHRDQAMAAASALHLMHAATFTHENLP 124

Query: 128 LTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRVMGEMARA 187
           LT R      M+   + PNIQLL   G+ P GFE+LA S D ++  SDRV RV+ E+ARA
Sbjct: 125 LTDRPKPKP-MIHHAHKPNIQLLIPDGMVPFGFELLANSDDPAQDNSDRVLRVIVEIARA 184

Query: 188 MGSEGWIGGQFKE----------LEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSE 247
           MGS G + G ++E          L +V+ AA  +   EK EGELHA   ACGAILG GSE
Sbjct: 185 MGSNGVVEGLYEEFLVEQSDGEGLSDVSLAATIKRTCEKKEGELHACAAACGAILGGGSE 244

Query: 248 EEIEKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCN 299
           EEIEK+RKYG  VGM +G   +V G KE E +R  ++EL+ LA KEL+ F+G KV+ + +
Sbjct: 245 EEIEKLRKYGLYVGMRQGYLNRV-GKKEKELERV-VEELRNLALKELQHFEGGKVEAISS 299

[Close]
BLAST of CmaCh09G009570 vs. NCBI nr
Match: gi|802588353|ref|XP_012070840.1| (PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Jatropha curcas])

HSP 1 Score: 233.8 bits (595), Expect = 4.0e-58
Identity = 132/294 (44.90%), Postives = 191/294 (64.97%), Query Frame = 1 

Query: 10  LHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHLRRIIIAKDP 69
           +H NP+   F   N  RP +     M +    ++   SYW +IN DI+ HL++ I  + P
Sbjct: 10  IHLNPTARMFSKPNPNRPFLSTAKSMVSFATSNKNHQSYWTSINADIDTHLKQAIPIRPP 69

Query: 70  PVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAATYTREYPPLT 129
            VV+EP+ H  F+AP  +A A+C+AACE VGG RDQA+AAA+AL L++A+ +T E  P+T
Sbjct: 70  LVVFEPMHHLTFAAPETTAPALCMAACELVGGQRDQAVAAASALHLLHASAFTHENIPVT 129

Query: 130 AR-GSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRVMGEMARAM 189
            R  SS+  + D  Y PNI+LLTG G+ P  FE+LA   +L+++ +DRV RV+ E++RA+
Sbjct: 130 DRPRSSSRPVFDHAYEPNIELLTGDGMTPFAFELLARFDNLAQNDADRVLRVIIEISRAV 189

Query: 190 GSEGWIGGQFKEL-------EEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEIE 249
           GS+G + GQ+ EL       ++   AA  + V  K +GELHA   ACGAILG GSEEE+E
Sbjct: 190 GSQGVVEGQYNELRYDESNGKKSFNAAWLDNVCRKKDGELHACAAACGAILGGGSEEEME 249

Query: 250 KMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQM 296
           K+R+YG  VGM++G+  +   G+ NE+  +K+ ELK LA KEL+ F  EKV ++
Sbjct: 250 KLRRYGLYVGMIEGIFNR---GERNEKWLQKVNELKNLALKELKDFNQEKVKKI 300

[Close]
BLAST of CmaCh09G009570 vs. NCBI nr
Match: gi|826137410|gb|AKJ26303.1| (chloroplast heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Paeonia lactiflora])

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57
Identity = 140/293 (47.78%), Postives = 188/293 (64.16%), Query Frame = 1 

Query: 7   LLQLHGN-PSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHLRRIII 66
           LL ++G  PSL     S   RP   ++ PMR ++  +    SYWA I+ DIE HL++ I 
Sbjct: 5   LLHINGTKPSLLTLSRSKPHRPLFSYK-PMRVSMSHNS---SYWATIDSDIEAHLKQAIP 64

Query: 67  AKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAATYTREY 126
            + P VV+EP+ H  F+AP+N+A A+CIA CE VGGHRDQA+AAA+AL LI+AA +T E+
Sbjct: 65  VRPPLVVFEPMHHLTFAAPKNTAPALCIATCELVGGHRDQAIAAASALHLIHAAAFTHEH 124

Query: 127 PPLTARG---SSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRVMG 186
            PLT R    SS   ++   + PNI+LLTG GI P G+E+LA S D S   SDRV RV+ 
Sbjct: 125 LPLTDRPTPISSRPGLIHHAFNPNIELLTGDGIHPFGYELLARSDDPSGDNSDRVLRVII 184

Query: 187 EMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEIEK 246
           E+ RA GS+G+I GQ++E    T    A  V EK EG L+    ACGAILG GSEEEIEK
Sbjct: 185 EITRATGSQGYIDGQYRE----TLGDVAVNVCEKKEGSLYGCAAACGAILGGGSEEEIEK 244

Query: 247 MRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQM 296
           +RKYG  VGM++G+   V  G+  +   + +  L+ LA KEL+ F   KV+++
Sbjct: 245 LRKYGFYVGMIQGMLYGV--GRNTKGSMDVVIGLRDLALKELKYFDQAKVEKI 287

[Close]
BLAST of CmaCh09G009570 vs. NCBI nr
Match: gi|823131997|ref|XP_012460748.1| (PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Gossypium raimondii])

HSP 1 Score: 229.2 bits (583), Expect = 9.8e-57
Identity = 134/300 (44.67%), Postives = 184/300 (61.33%), Query Frame = 1 

Query: 7   LLQLHGNP--SLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHLRRII 66
           L  +HGNP   +P  P      P+     P R   V      SYW +IN DIE HL++ I
Sbjct: 5   LSHIHGNPIFHVPYTPIPTRQCPS---NLPCRLFKVTMSSNQSYWTSINADIEAHLKQAI 64

Query: 67  IAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAATYTRE 126
             ++P  V+EP+ H  FSAPR++A A+C+AACE VGGHRDQA+ AA+ALQL+YAA++  E
Sbjct: 65  PVREPLSVFEPMNHLTFSAPRSTAPALCVAACELVGGHRDQALPAASALQLMYAASFAHE 124

Query: 127 YPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRVMGEM 186
           + PLT +     + +  +Y PNI+LL G  + P G E+LA S D ++  SDRV RVM E+
Sbjct: 125 HLPLT-QSCRPKSEIQHLYGPNIELLIGDAMIPFGLELLAVSNDSTQKNSDRVLRVMVEI 184

Query: 187 ARAMGSEGWIGGQFKELE-EVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEIEKM 246
            RA+GS+G + GQ+ E+E E +   + E   EK EG LH    ACGAILG GSE EIEKM
Sbjct: 185 TRAIGSQGMVHGQYYEVEYESSCIRQNERASEKYEGTLHGCAAACGAILGGGSEVEIEKM 244

Query: 247 RKYGRIVGMVKGLSKKVFGGKENERKREKIKEL----KALAFKELEGFKGEKVDQMCNFF 300
           R+YG  +G ++G+ ++      +ERK + +KEL    + LA  EL GF   KV+ +   F
Sbjct: 245 RRYGVYIGKIQGMIRR------DERKSKDLKELVEETRKLATNELSGFNEAKVEAISKLF 294

The following BLAST results are available for this feature:
BLAST of CmaCh09G009570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GGR_ARATH2.5e-2027.41Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic... [more]
GGPPS_HEVBR1.7e-1627.60Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis GN=GG... [more]
GGPP7_ARATH2.9e-1629.17Geranylgeranyl pyrophosphate synthase 7, chloroplastic OS=Arabidopsis thaliana G... [more]
GGPP2_ARATH4.2e-1525.27Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2 OS=Arabidops... [more]
GGPPS_CAPAN7.1e-1524.82Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum GN=GGPS1... [more]
BLAST of CmaCh09G009570 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8P9_CUCSA6.5e-11674.09Uncharacterized protein OS=Cucumis sativus GN=Csa_7G211090 PE=4 SV=1[more]
A0A067KSE3_JATCU2.8e-5844.90Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00898 PE=4 SV=1[more]
A0A0G3BEA5_PAELC8.1e-5847.78Chloroplast heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS... [more]
A0A0D2NK44_GOSRA6.8e-5744.67Uncharacterized protein OS=Gossypium raimondii GN=B456_002G089600 PE=4 SV=1[more]
A0A061F5K1_THECC1.7e-5543.89Geranyl-diphosphate synthase, putative OS=Theobroma cacao GN=TCM_030862 PE=4 SV=... [more]
BLAST of CmaCh09G009570 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38460.11.4e-2127.41 geranylgeranyl reductase[more]
AT2G18620.11.6e-1729.17 Terpenoid synthases superfamily protein[more]
AT2G23800.12.3e-1625.27 geranylgeranyl pyrophosphate synthase 2[more]
AT4G36810.15.2e-1626.24 geranylgeranyl pyrophosphate synthase 1[more]
AT3G32040.11.5e-1527.92 Terpenoid synthases superfamily protein[more]
BLAST of CmaCh09G009570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444204|ref|XP_004139865.1|9.3e-11674.09PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, ch... [more]
gi|1009111162|ref|XP_015899572.1|3.7e-6450.17PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, ch... [more]
gi|802588353|ref|XP_012070840.1|4.0e-5844.90PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, ch... [more]
gi|826137410|gb|AKJ26303.1|1.2e-5747.78chloroplast heterodimeric geranylgeranyl pyrophosphate synthase small subunit [P... [more]
gi|823131997|ref|XP_012460748.1|9.8e-5744.67PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, ch... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom_sf
IPR017446Polyprenyl synthetase-related
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G009570.1CmaCh09G009570.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domainGENE3DG3DSA:1.10.600.10coord: 47..252
score: 6.3
IPR008949Isoprenoid synthase domainunknownSSF48576Terpenoid synthasescoord: 47..252
score: 1.76
IPR017446Polyprenyl synthetase-relatedPANTHERPTHR12001GERANYLGERANYL PYROPHOSPHATE SYNTHASEcoord: 1..256
score: 4.6
NoneNo IPR availablePANTHERPTHR12001:SF57SUBFAMILY NOT NAMEDcoord: 1..256
score: 4.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh09G009570Cucsa.007290Cucumber (Gy14) v1cgycmaB0242
CmaCh09G009570Cla016321Watermelon (97103) v1cmawmB011
CmaCh09G009570Csa7G211090Cucumber (Chinese Long) v2cmacuB040
CmaCh09G009570MELO3C013157Melon (DHL92) v3.5.1cmameB018
CmaCh09G009570ClCG09G010850Watermelon (Charleston Gray)cmawcgB009
CmaCh09G009570CSPI07G09860Wild cucumber (PI 183967)cmacpiB040
CmaCh09G009570CmoCh09G009550Cucurbita moschata (Rifu)cmacmoB027
CmaCh09G009570Lsi02G018990Bottle gourd (USVL1VR-Ls)cmalsiB018
CmaCh09G009570Cp4.1LG06g08820Cucurbita pepo (Zucchini)cmacpeB060
CmaCh09G009570MELO3C013157.2Melon (DHL92) v3.6.1cmamedB019
CmaCh09G009570CsaV3_7G021880Cucumber (Chinese Long) v3cmacucB0049
CmaCh09G009570Cla97C09G173590Watermelon (97103) v2cmawmbB050
CmaCh09G009570Bhi09G001387Wax gourdcmawgoB0027
CmaCh09G009570CsGy7G009350Cucumber (Gy14) v2cgybcmaB882
CmaCh09G009570Carg12826Silver-seed gourdcarcmaB1240
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G009570Watermelon (97103) v2cmawmbB018
CmaCh09G009570Cucurbita maxima (Rimu)cmacmaB052
CmaCh09G009570Cucurbita maxima (Rimu)cmacmaB062
CmaCh09G009570Cucurbita moschata (Rifu)cmacmoB048
CmaCh09G009570Wild cucumber (PI 183967)cmacpiB019
CmaCh09G009570Cucumber (Chinese Long) v2cmacuB019
CmaCh09G009570Watermelon (Charleston Gray)cmawcgB013
CmaCh09G009570Cucurbita pepo (Zucchini)cmacpeB046
CmaCh09G009570Cucumber (Gy14) v2cgybcmaB886
CmaCh09G009570Melon (DHL92) v3.6.1cmamedB046
CmaCh09G009570Cucumber (Chinese Long) v3cmacucB0026
CmaCh09G009570Cucumber (Chinese Long) v3cmacucB0045
CmaCh09G009570Cucumber (Chinese Long) v3cmacucB0052