CmaCh09G006210 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGCAAATCTCTTCCTGTGCTCAAAGGAGCTTCATCATTTTCATCGTTAAAGCGCCGAATCTTCATCTCTAGCGGCTTGCATTTGCCATCTGTTTCTAACATCAGAATTCGAAAATGTTTGACTGCTTCAGGCATTATGGCCTCTCTTCAACCTCCCGATGTCCTCCGTTTAGCTGAAACAGCTCGAATTTCTCTCACTCCCGGTGAGGTATGCGAGGCTCTCCCCTCGTCCATCTTTGCTTCTGTTTATTCAATTTTTTGAATCGAGTAACATTTGCTTCTTACTATTCGGGTTTGTGTTGCTTGATTGTCTAATTCAGGTTGAAGAATTGGCGCCTAAAATTGGACAAGTTGTTGACTGGTAAGTTCATCTTTCCCTCGCCTATGCATACATACACAAACTCTCATAACTAGTAGATCTTGAAATACAATGGTATCTTGGTCAGGTCTCTAAGTAAATTATGATGGGATAACTGCTTGTTAGGTCCTAAACATTGAAGTGATCTTCACCAAGAGGTTGTAAAATGTTGTTCTCCATAATTTGTTTGGTTTACTTGGGTCTTGCGTCCTCTGATACATCGGCTAACAAATATTTTCTTTCCCTTTTGGTCTGTTTAGAGATAGATTTCCACACTCTTTCCCCTCTCCAACCAATGTGGAATCTCAGAATTCACCCTCCTTGGGCCAGAGTACTTACTGGCACACTGCTCGATATTTGGCTCTGATATCATTTGTAACATCTCAAACCCACCACTAGCCAATATTGTTCTCTTTGGACTTTTTCTTTTAGTTTCTCCTCAAGGTTTTTGAAAAAAACACGTCTGTTAGCTAGAAATTTTTACACCCTTATAAGAGGTGTTTCGGAAGCTTCATTGGGAAGGACTTGAACAAATCAAAAAAGTGTCTACAAGAGAATTCCATATATATATATATTTTTTTTTGGAGAAAGGACAATGTAGGGAGAGATGACAACAATTTTCTTTATCTTTCTTACGAAGATGCACTAGCTTGAGAGAAGAGAGAACGTGGGGTTCCTTTTTTGAACCTTTGCAGAATGCAAGCCCCCATGAGCTGGGTTCAATCCTAAAATCTCACCTTTTCAGACTCCTCCTCCCTCTAAATAACCTTAATGAACGGCTTTGAAGGGACGCCACCGCATCTCCTTTATTATTAAGGGAGATAGGAGGGGGTTGGAAAAGGAGGCAATTAGAATCCAAACTCCAACAGTGAATAGCCCTTTACTATTGAATTCAAACACTTTTCAGAAGAATGAATGATCTGTTCGTTTAAGATTCTATATTAAGTAGCCTAACACTTGGCTACATTGTGAGATCCCACCTTAGTTGGAAAGGGAAACGAAACATTCTTTACAAGGATATGGAAATCTCTCCCTAGAAAACGCGTTTTAAAACAGTGAGGTTGACGACGATACATAATGGACCGAAGCGAATAATATTTGCTAACGGTGTGTTTTGGTTGTTACACACCTTCTAGTGATCCTAACCATGGTGGAGTCAAAATTAGTGAGTTGGAAATTTTGGAAAATTTCTCCTTTAGAGGCCGTGAGGTGTCCATTGATCTGTCCAAAAAGAAATAGAGACGCCATTATCCACCTTAACATTCAAAACCACCTTCATCCTCTGACTACCTTTAGCAATGAAGTTCCATGGACTTTTGCCGTTGTAGCTTCCATTTTTCCTATGAAATTGTTCATTCTGTCGACTCAATTCTCTCATCTGTTGTACCCTTTGGTTTCCAACTACTTTAATATGATAACTCTATTTTTCAGGTTTGGGCAGCTCCAGACAGTTGATCTTCAAAGTATGGAACCTTTCATTAGAGCAGGTGATCATCAATCATTTTGCAACTTGTTTGTTGTTCTTCTTCTAGCATACCTTTGCTTTTTCCTCACTGTTCAGTGTTGGCTTGATGAAAAAGACAAGGAGGCATTGCCTTTTTCTCGCCGTGGAAACTAGTGAGCTAATGAAAAACATCAAGGAGGGGATGGCAACAATAGGACCCATAACTTTGTTCCGTTTACTTGTGCTATGTAACAGCCCTCGCGACATCTGATAAAATTGGAACCATACATACAAGATTAGTATAGCCCGTGAGCAAGGATGCACGTACAAATCAAGAAGTGGTATCAAAGCCAGATACCAGGCGGTGTGCCAACAAAGATGTTGGACTCCAAGGAATGTGGATTGTGAGATCCTACGTTAGTTGGAGAGGGGAATTAAGCATCTTTTATAAGGGTATGGAAACCTCTCCCTAACAGACACGTTTTAAAATTGTGAGGCTGATAGCGGTATGTAGCGAGCTAAAGCGGACAATATCTGCTAGCGGTGGCTTGGCTGTTGCATGCTATCAAGTGCAAAACAACCGATTATGATTTCAGAATTCCCAACCCCAGCCATAGATGTTTATTAATATTTCTGATAGACCATTACGAACATGATTTTTTTGCAATTAAACTGCTAAAACTTCAAGTTATTTCAACTATTTACAGATAGTGGAGGTGGCAATCAGCGGAATGACGCTCCTGAAACATTTGAAAACAGGTAACCTGGTTATTTTGCAACTTGGGCTATCCCAAAATTTAGCAGGAAGCTTTGGCCATAACTTCTACTATTTTTTTGACACCAGAGAGGCCATGATTCGCGCAGTTCCAGCCTTCGATGAGCCGTATATCAAAGTTCCTAAAGTTCTCAATAAGGAGTAGTTGCTAAGGTTAGCTCATTCATTAATGCCATGTTCTTCAACATCTTATGGATTAGTTTTTCTATAGGTTACTAAATGATATTTGAATTACAATTCGAATTAGTCATCCATTAATCTCAATCTTAGTTCAATTCGTATAACGGCCCAAGCTTTCCGCTAGTAGATAATGTCTTCTTTGGACTTTCCCTTCCGAACTTCCCCT ATGGGAAGCAAATCTCTTCCTGTGCTCAAAGGAGCTTCATCATTTTCATCGTTAAAGCGCCGAATCTTCATCTCTAGCGGCTTGCATTTGCCATCTGTTTCTAACATCAGAATTCGAAAATGTTTGACTGCTTCAGGCATTATGGCCTCTCTTCAACCTCCCGATGTCCTCCGTTTAGCTGAAACAGCTCGAATTTCTCTCACTCCCGGTGAGGTTGAAGAATTGGCGCCTAAAATTGGACAAGTTGTTGACTGGTTTGGGCAGCTCCAGACAGTTGATCTTCAAAGTATGGAACCTTTCATTAGAGCAGATAGTGGAGGTGGCAATCAGCGGAATGACGCTCCTGAAACATTTGAAAACAGAGAGGCCATGATTCGCGCAGTTCCAGCCTTCGATGAGCCGTATATCAAAGTTCCTAAAGTTCTCAATAAGGAGTAGTTGCTAAGGTTAGCTCATTCATTAATGCCATGTTCTTCAACATCTTATGGATTAGTTTTTCTATAGGTTACTAAATGATATTTGAATTACAATTCGAATTAGTCATCCATTAATCTCAATCTTAGTTCAATTCGTATAACGGCCCAAGCTTTCCGCTAGTAGATAATGTCTTCTTTGGACTTTCCCTTCCGAACTTCCCCT ATGGGAAGCAAATCTCTTCCTGTGCTCAAAGGAGCTTCATCATTTTCATCGTTAAAGCGCCGAATCTTCATCTCTAGCGGCTTGCATTTGCCATCTGTTTCTAACATCAGAATTCGAAAATGTTTGACTGCTTCAGGCATTATGGCCTCTCTTCAACCTCCCGATGTCCTCCGTTTAGCTGAAACAGCTCGAATTTCTCTCACTCCCGGTGAGGTTGAAGAATTGGCGCCTAAAATTGGACAAGTTGTTGACTGGTTTGGGCAGCTCCAGACAGTTGATCTTCAAAGTATGGAACCTTTCATTAGAGCAGATAGTGGAGGTGGCAATCAGCGGAATGACGCTCCTGAAACATTTGAAAACAGAGAGGCCATGATTCGCGCAGTTCCAGCCTTCGATGAGCCGTATATCAAAGTTCCTAAAGTTCTCAATAAGGAGTAG MGSKSLPVLKGASSFSSLKRRIFISSGLHLPSVSNIRIRKCLTASGIMASLQPPDVLRLAETARISLTPGEVEELAPKIGQVVDWFGQLQTVDLQSMEPFIRADSGGGNQRNDAPETFENREAMIRAVPAFDEPYIKVPKVLNKE
BLAST of CmaCh09G006210 vs. Swiss-Prot
Match: GATC_VITVI (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Vitis vinifera GN=GATC PE=3 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.6e-36 Identity = 83/145 (57.24%), Postives = 106/145 (73.10%), Query Frame = 1
BLAST of CmaCh09G006210 vs. Swiss-Prot
Match: GATC_RICCO (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Ricinus communis GN=GATC PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 1.9e-34 Identity = 82/146 (56.16%), Postives = 102/146 (69.86%), Query Frame = 1
BLAST of CmaCh09G006210 vs. Swiss-Prot
Match: GATC_POPTR (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Populus trichocarpa GN=GATC PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 5.2e-32 Identity = 84/149 (56.38%), Postives = 103/149 (69.13%), Query Frame = 1
BLAST of CmaCh09G006210 vs. Swiss-Prot
Match: GATC_ARATH (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GATC PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 8.9e-32 Identity = 65/114 (57.02%), Postives = 87/114 (76.32%), Query Frame = 1
BLAST of CmaCh09G006210 vs. Swiss-Prot
Match: GATC_ORYSI (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Oryza sativa subsp. indica GN=GATC PE=3 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.2e-30 Identity = 73/129 (56.59%), Postives = 90/129 (69.77%), Query Frame = 1
BLAST of CmaCh09G006210 vs. TrEMBL
Match: A0A0A0LJU5_CUCSA (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Cucumis sativus GN=GATC PE=3 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 8.9e-55 Identity = 115/145 (79.31%), Postives = 124/145 (85.52%), Query Frame = 1
BLAST of CmaCh09G006210 vs. TrEMBL
Match: M5XT68_PRUPE (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Prunus persica GN=GATC PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.5e-38 Identity = 91/148 (61.49%), Postives = 109/148 (73.65%), Query Frame = 1
BLAST of CmaCh09G006210 vs. TrEMBL
Match: V4UNJ8_9ROSI (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Citrus clementina GN=GATC PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 4.6e-35 Identity = 89/153 (58.17%), Postives = 108/153 (70.59%), Query Frame = 1
BLAST of CmaCh09G006210 vs. TrEMBL
Match: A0A067GMN3_CITSI (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Citrus sinensis GN=GATC PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 4.6e-35 Identity = 89/153 (58.17%), Postives = 108/153 (70.59%), Query Frame = 1
BLAST of CmaCh09G006210 vs. TrEMBL
Match: A0A0B0P3Y3_GOSAR (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Gossypium arboreum GN=GATC PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.3e-34 Identity = 85/151 (56.29%), Postives = 105/151 (69.54%), Query Frame = 1
BLAST of CmaCh09G006210 vs. TAIR10
Match: AT4G32915.1 (AT4G32915.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 137.9 bits (346), Expect = 5.0e-33 Identity = 65/114 (57.02%), Postives = 87/114 (76.32%), Query Frame = 1
BLAST of CmaCh09G006210 vs. NCBI nr
Match: gi|659132234|ref|XP_008466091.1| (PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucumis melo]) HSP 1 Score: 227.6 bits (579), Expect = 1.4e-56 Identity = 117/145 (80.69%), Postives = 127/145 (87.59%), Query Frame = 1
BLAST of CmaCh09G006210 vs. NCBI nr
Match: gi|449436902|ref|XP_004136231.1| (PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucumis sativus]) HSP 1 Score: 221.1 bits (562), Expect = 1.3e-54 Identity = 115/145 (79.31%), Postives = 124/145 (85.52%), Query Frame = 1
BLAST of CmaCh09G006210 vs. NCBI nr
Match: gi|596298739|ref|XP_007227542.1| (hypothetical protein PRUPE_ppa012946mg [Prunus persica]) HSP 1 Score: 167.2 bits (422), Expect = 2.2e-38 Identity = 91/148 (61.49%), Postives = 109/148 (73.65%), Query Frame = 1
BLAST of CmaCh09G006210 vs. NCBI nr
Match: gi|694365164|ref|XP_009361499.1| (PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial-like [Pyrus x bretschneideri]) HSP 1 Score: 161.4 bits (407), Expect = 1.2e-36 Identity = 87/145 (60.00%), Postives = 108/145 (74.48%), Query Frame = 1
BLAST of CmaCh09G006210 vs. NCBI nr
Match: gi|645226657|ref|XP_008220142.1| (PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Prunus mume]) HSP 1 Score: 158.7 bits (400), Expect = 7.8e-36 Identity = 88/148 (59.46%), Postives = 107/148 (72.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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