CmaCh09G003780 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G003780
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ethylene-responsive transcription factor 2
Location	Cma_Chr09 : 1581912 .. 1582514 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGACCGTCGTGGCTCCCACAGTGAAACGGACGACAAGTCGGATCAGAATCTAAAGTACAAAGGCGTTAGAAAGAGAAAATGGGGGAAATGGGTGTCTGAAATTCGGCTACCCAATAGCCGTGACCGAATTTGGTTGGGTTCTTATGACAAACCCGAACAGGCGGCGCGTGCTTTCGACGCAGCTCAGTTCTGTCTGCGTGGTCCCCGCGCGAAGTTTAATTTTCCTGACAGTCCACCGGAGATTGAAGGCGGGGACCGACTTTCGGCTCAGGAGATTCAGGCCGCTGCTGCCAAGTTTGCGGGCGAGCACGGTGGAGACGAAGGAGGTGATGGGTATTGTAATGATGAAGCTCTGGTGGGGGAACATTCTTCTGGGGCGGTTGATGGCGGAGATGGCGGCGGCGTTTGGCCGGTTTGGGACTTGTTGGACGGTGGTTCGGGATTTGGGTTCGATAATATTATGGGTGGGAATGCAATGATTTGTGATGAAGATATTAGTCTTGGGGTGCAAGAATATATGGAGGAGGATGAGTTTGGTGATGGTGGAGGCTATTTTTATCACGAGCCTAATTTCCTATGGAACTTTGATGATCATTAA

mRNA sequence

ATGGAGGACCGTCGTGGCTCCCACAGTGAAACGGACGACAAGTCGGATCAGAATCTAAAGTACAAAGGCGTTAGAAAGAGAAAATGGGGGAAATGGGTGTCTGAAATTCGGCTACCCAATAGCCGTGACCGAATTTGGTTGGGTTCTTATGACAAACCCGAACAGGCGGCGCGTGCTTTCGACGCAGCTCAGTTCTGTCTGCGTGGTCCCCGCGCGAAGTTTAATTTTCCTGACAGTCCACCGGAGATTGAAGGCGGGGACCGACTTTCGGCTCAGGAGATTCAGGCCGCTGCTGCCAAGTTTGCGGGCGAGCACGGTGGAGACGAAGGAGGTGATGGGTATTGTAATGATGAAGCTCTGGTGGGGGAACATTCTTCTGGGGCGGTTGATGGCGGAGATGGCGGCGGCGTTTGGCCGGTTTGGGACTTGTTGGACGGTGGTTCGGGATTTGGGTTCGATAATATTATGGGTGGGAATGCAATGATTTGTGATGAAGATATTAGTCTTGGGGTGCAAGAATATATGGAGGAGGATGAGTTTGGTGATGGTGGAGGCTATTTTTATCACGAGCCTAATTTCCTATGGAACTTTGATGATCATTAA

Coding sequence (CDS)

ATGGAGGACCGTCGTGGCTCCCACAGTGAAACGGACGACAAGTCGGATCAGAATCTAAAGTACAAAGGCGTTAGAAAGAGAAAATGGGGGAAATGGGTGTCTGAAATTCGGCTACCCAATAGCCGTGACCGAATTTGGTTGGGTTCTTATGACAAACCCGAACAGGCGGCGCGTGCTTTCGACGCAGCTCAGTTCTGTCTGCGTGGTCCCCGCGCGAAGTTTAATTTTCCTGACAGTCCACCGGAGATTGAAGGCGGGGACCGACTTTCGGCTCAGGAGATTCAGGCCGCTGCTGCCAAGTTTGCGGGCGAGCACGGTGGAGACGAAGGAGGTGATGGGTATTGTAATGATGAAGCTCTGGTGGGGGAACATTCTTCTGGGGCGGTTGATGGCGGAGATGGCGGCGGCGTTTGGCCGGTTTGGGACTTGTTGGACGGTGGTTCGGGATTTGGGTTCGATAATATTATGGGTGGGAATGCAATGATTTGTGATGAAGATATTAGTCTTGGGGTGCAAGAATATATGGAGGAGGATGAGTTTGGTGATGGTGGAGGCTATTTTTATCACGAGCCTAATTTCCTATGGAACTTTGATGATCATTAA

Protein sequence

MEDRRGSHSETDDKSDQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPRAKFNFPDSPPEIEGGDRLSAQEIQAAAAKFAGEHGGDEGGDGYCNDEALVGEHSSGAVDGGDGGGVWPVWDLLDGGSGFGFDNIMGGNAMICDEDISLGVQEYMEEDEFGDGGGYFYHEPNFLWNFDDH

Homology

[Close]

BLAST of CmaCh09G003780 vs. Swiss-Prot
Match: ERF17_ARATH (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF017 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.2e-33
Identity = 72/101 (71.29%), Postives = 78/101 (77.23%), Query Frame = 1


Query: 15  SDQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPRAKF 74
           S    KYKGVRKRKWGKWVSEIRLPNSR+RIWLGSYD PE+AARAFDAA +CLRG  AKF
Sbjct: 6   SSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNAKF 65

Query: 75  NFPDSPPEIEGGDRLSAQEIQAAAAKFAGEHGGD-EGGDGY 115
           NFPD+PP I GG  LS  EI+ AAA+FA     D  GG GY
Sbjct: 66  NFPDNPPVISGGRNLSRSEIREAAARFANSAEDDSSGGAGY 106

[Close]

BLAST of CmaCh09G003780 vs. Swiss-Prot
Match: ERF16_ARATH (Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana GN=ERF016 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.5e-32
Identity = 72/129 (55.81%), Postives = 89/129 (68.99%), Query Frame = 1


Query: 16  DQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPRAKFN 75
           D + KY GVRKRKWGKWV+EIRLPNSRDRIWLGS+D  E+AARAFDAA +CLRGP A+FN
Sbjct: 2   DASPKYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFN 61

Query: 76  FPDSPPEIEGGDRLSAQEIQAAAAKFAGE---------HGGDEGGDGYCNDEALVGEHSS 135
           FPD+PPEI GG  L+ Q+IQ  A++FA E         H     GD    +E ++   + 
Sbjct: 62  FPDNPPEIPGGRSLTPQQIQVVASRFACEEELLPPEQHHPSPPRGDHNTEEEVIIS--AR 121

[Close]

BLAST of CmaCh09G003780 vs. Swiss-Prot
Match: ERF18_ARATH (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF018 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.3e-30
Identity = 69/114 (60.53%), Postives = 79/114 (69.30%), Query Frame = 1


Query: 20  KYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPRAKFNFPDS 79
           KYKGVRKRKWGKWVSEIRLP+SR+RIWLGSYD PE+AARAFDAAQFCLRG  A FNFP++
Sbjct: 20  KYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQFCLRGGDANFNFPNN 79

Query: 80  PPEIEGGDRLSAQEIQAAAAKFAGEHGGDEGGDGYCNDEALVGEHSSGAVDGGD 134
           PP I     L+  EIQ AAA+FA               + + GE  SG V G +
Sbjct: 80  PPSISVEKSLTPPEIQEAAARFANTF-----------QDIVKGEEESGLVPGSE 122

[Close]

BLAST of CmaCh09G003780 vs. Swiss-Prot
Match: ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF015 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.7e-21
Identity = 54/101 (53.47%), Postives = 69/101 (68.32%), Query Frame = 1


Query: 5   RGSHSETDDKSDQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQ 64
           +G+H +   K      Y+GVRKR WGKWVSEIR+P +  RIWLGSYD PE+AARA+DAA 
Sbjct: 16  KGAHEDRKFKC-----YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAAL 75

Query: 65  FCLRGPRAKFNFP-DSPPEI-EGGDR-LSAQEIQAAAAKFA 103
           FC+RG +  +NFP D  P++ EG  R LS  +IQ  A  +A
Sbjct: 76  FCIRGEKGVYNFPTDKKPQLPEGSVRPLSKLDIQTIATNYA 111

[Close]

BLAST of CmaCh09G003780 vs. Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.7e-21
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 1


Query: 6   GSHSETDDKSDQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQF 65
           G   ET   + ++  Y GVRKR+WGKWVSEIR P  + RIWLGS+  PE AA+A+D A F
Sbjct: 30  GGGKETSSSTTRHPVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAF 89

Query: 66  CLRGPRAKFNFPDSPPEIEGGDRLSAQEIQAAAAKFA 103
           CL+G +A+ NFP+   ++      + ++IQ AAAK A
Sbjct: 90  CLKGRKAQLNFPEEIEDLPRPSTCTPRDIQVAAAKAA 126

[Close]

BLAST of CmaCh09G003780 vs. TrEMBL
Match: A0A0A0L462_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649620 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.9e-61
Identity = 137/204 (67.16%), Postives = 154/204 (75.49%), Query Frame = 1


Query: 1   MEDRRGSHSETDDKSDQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAF 60
           M DR  S S T+     + KYKGVR+RKWGKWVSEIRLPNSRDRIWLGSYDKPE+AARAF
Sbjct: 1   MADRLNS-STTEPNDTSSAKYKGVRRRKWGKWVSEIRLPNSRDRIWLGSYDKPEKAARAF 60

Query: 61  DAAQFCLRGPRAKFNFPDSPPEIEGGDRLSAQEIQAAAAKFAGEHGGDEGGDGYCNDEAL 120
           DAAQFCLRGP+AKFNFPDSPPEI+GGDRLSAQEIQAAAAK+A EHG +EG          
Sbjct: 61  DAAQFCLRGPQAKFNFPDSPPEIDGGDRLSAQEIQAAAAKYAEEHG-EEG---------- 120

Query: 121 VGEHSSGAVDGGDGGGVWPV-WDL-LDGGSGFGFDNIMGGNAMICDEDISLGVQ-EYMEE 180
           VG H  G     +GGGVWP  WD+ +DGG  FGF    GGNAMI   DIS GVQ E ME+
Sbjct: 121 VGNHDEGVTV--EGGGVWPDNWDMTMDGGWEFGF----GGNAMIYGGDISFGVQDENMEK 180

Query: 181 DEF-GDGGGYFYHEPNFLWNFDDH 201
           ++F  +GG +F HEPNFLWNFD+H
Sbjct: 181 EDFDNNGGNHFCHEPNFLWNFDNH 186

[Close]

BLAST of CmaCh09G003780 vs. TrEMBL
Match: A0A059CUB8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03175 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.2e-35
Identity = 95/196 (48.47%), Postives = 123/196 (62.76%), Query Frame = 1


Query: 20  KYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPRAKFNFPDS 79
           +YKGVR RKWGKWVSEIRLPNSR+RIWLGSYD PE+AARAFDAA +CLRG +A+FNFPDS
Sbjct: 18  RYKGVRLRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDAALYCLRGRQAQFNFPDS 77

Query: 80  PPEIEGGDRLSAQEIQAAAAKFAGEHGGDEGGDGYCNDEALVGEHSSGAV---------D 139
           PP+I G   L+ QEI+A AA+FA + G +  G    ND+     H + ++         +
Sbjct: 78  PPDIAGAQGLTPQEIRAVAARFANQ-GPEGSGRSRRNDDGHGHGHGASSMAAREGGDNGN 137

Query: 140 GGDGGGVWPVWDLLDG------GSGFG-FDNI--MGGNAMICDEDISLGVQEYMEEDEFG 198
           G DGGG    W  L+       GSGFG +D +  +GG+ +    + S     Y  +DE G
Sbjct: 138 GNDGGGSSMDWSFLNALDVDCDGSGFGLYDGLDYVGGSQLEPPPEAS--STTYNADDENG 197

[Close]

BLAST of CmaCh09G003780 vs. TrEMBL
Match: T1QCN5_CARPA (Ethylene-responsive transcription factor 2 OS=Carica papaya GN=ERF2 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.1e-34
Identity = 100/222 (45.05%), Postives = 125/222 (56.31%), Query Frame = 1


Query: 12  DDKSDQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPR 71
           ++ +  +LKYKGVRKRKWGKWVSEIRLPNSR+RIWLGSYD PE+AARAFDAA +CLRGP+
Sbjct: 6   NNTTSTDLKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGPQ 65

Query: 72  AKFNFPDSPPEIEGGDRLSAQEIQAAAAKFAGE----------HGGDEGGDGYCNDEALV 131
           AKFNFP++PPEIEGG  +S Q+IQ  A++FA E          H   +G DG  N     
Sbjct: 66  AKFNFPENPPEIEGGRSMSPQQIQLVASRFANEEPQPPVHHHHHHHQDGTDGGDNSSRAN 125

Query: 132 GEHSSGAVDGGDGGGV------------------WPVWDLLDGG---SGFGF-----DNI 191
            E SS +V  G  G V                  W  W++LD G     FGF     +  
Sbjct: 126 IETSSSSVSDGTIGQVESDMNNVFYETCDVNHIDWSYWNMLDSGVTACDFGFVPPPPEPT 185

Query: 192 MGGNAMICDEDISLGVQEYMEEDEFGDGGGYFYHEPNFLWNF 198
           +  N    D+DI+        ED+F +         +FLWNF
Sbjct: 186 IFDNG--DDDDIT-------PEDDFSN--------QSFLWNF 210

[Close]

BLAST of CmaCh09G003780 vs. TrEMBL
Match: M1D178_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030781 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.3e-34
Identity = 69/86 (80.23%), Postives = 77/86 (89.53%), Query Frame = 1


Query: 20  KYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPRAKFNFPDS 79
           K+KGVR RKWGKWVSE+RLPNSRDRIWLGSYD  E+AARAFDAAQFCLRGP+AKFNFPDS
Sbjct: 11  KFKGVRLRKWGKWVSEVRLPNSRDRIWLGSYDSAEKAARAFDAAQFCLRGPKAKFNFPDS 70

Query: 80  PPEIEGGDRLSAQEIQAAAAKFAGEH 106
           PP+I GG RLS  EIQA AA+FA ++
Sbjct: 71  PPDISGGQRLSPAEIQAVAARFANDY 96

[Close]

BLAST of CmaCh09G003780 vs. TrEMBL
Match: A0A0K9QIZ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_173960 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.1e-34
Identity = 83/136 (61.03%), Postives = 94/136 (69.12%), Query Frame = 1


Query: 10  ETDDKSDQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRG 69
           E ++K D ++KYKGVRKRKWGKWVSEIRLPNSR+RIWLGSYD  E+AARAFDAAQFCLRG
Sbjct: 7   EYENKVDNSIKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAAQFCLRG 66

Query: 70  PRAKFNFPDSPPEIEGGDRLSAQEIQAAAAKFAGEH--------GGDEGGDGYCNDEALV 129
             A FNFPD+PPEI GG  ++  EIQAAAA+FA           GG  GGD    DE  V
Sbjct: 67  KSANFNFPDNPPEIAGGRGMTPSEIQAAAARFANLSSSSEAAVVGGSCGGDQTIRDEPTV 126

Query: 130 GEHSSGAVDGGDGGGV 138
            E  S +    DG  V
Sbjct: 127 EESMSYSPSFSDGATV 142

[Close]

BLAST of CmaCh09G003780 vs. TAIR10
Match: AT1G19210.1 (AT1G19210.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-34
Identity = 72/101 (71.29%), Postives = 78/101 (77.23%), Query Frame = 1


Query: 15  SDQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPRAKF 74
           S    KYKGVRKRKWGKWVSEIRLPNSR+RIWLGSYD PE+AARAFDAA +CLRG  AKF
Sbjct: 6   SSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNAKF 65

Query: 75  NFPDSPPEIEGGDRLSAQEIQAAAAKFAGEHGGD-EGGDGY 115
           NFPD+PP I GG  LS  EI+ AAA+FA     D  GG GY
Sbjct: 66  NFPDNPPVISGGRNLSRSEIREAAARFANSAEDDSSGGAGY 106

[Close]

BLAST of CmaCh09G003780 vs. TAIR10
Match: AT5G21960.1 (AT5G21960.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-33
Identity = 72/129 (55.81%), Postives = 89/129 (68.99%), Query Frame = 1


Query: 16  DQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPRAKFN 75
           D + KY GVRKRKWGKWV+EIRLPNSRDRIWLGS+D  E+AARAFDAA +CLRGP A+FN
Sbjct: 2   DASPKYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFN 61

Query: 76  FPDSPPEIEGGDRLSAQEIQAAAAKFAGE---------HGGDEGGDGYCNDEALVGEHSS 135
           FPD+PPEI GG  L+ Q+IQ  A++FA E         H     GD    +E ++   + 
Sbjct: 62  FPDNPPEIPGGRSLTPQQIQVVASRFACEEELLPPEQHHPSPPRGDHNTEEEVIIS--AR 121

[Close]

BLAST of CmaCh09G003780 vs. TAIR10
Match: AT1G74930.1 (AT1G74930.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31
Identity = 69/114 (60.53%), Postives = 79/114 (69.30%), Query Frame = 1


Query: 20  KYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPRAKFNFPDS 79
           KYKGVRKRKWGKWVSEIRLP+SR+RIWLGSYD PE+AARAFDAAQFCLRG  A FNFP++
Sbjct: 20  KYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQFCLRGGDANFNFPNN 79

Query: 80  PPEIEGGDRLSAQEIQAAAAKFAGEHGGDEGGDGYCNDEALVGEHSSGAVDGGD 134
           PP I     L+  EIQ AAA+FA               + + GE  SG V G +
Sbjct: 80  PPSISVEKSLTPPEIQEAAARFANTF-----------QDIVKGEEESGLVPGSE 122

[Close]

BLAST of CmaCh09G003780 vs. TAIR10
Match: AT4G31060.1 (AT4G31060.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 3.2e-22
Identity = 54/101 (53.47%), Postives = 69/101 (68.32%), Query Frame = 1


Query: 5   RGSHSETDDKSDQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQ 64
           +G+H +   K      Y+GVRKR WGKWVSEIR+P +  RIWLGSYD PE+AARA+DAA 
Sbjct: 16  KGAHEDRKFKC-----YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAAL 75

Query: 65  FCLRGPRAKFNFP-DSPPEI-EGGDR-LSAQEIQAAAAKFA 103
           FC+RG +  +NFP D  P++ EG  R LS  +IQ  A  +A
Sbjct: 76  FCIRGEKGVYNFPTDKKPQLPEGSVRPLSKLDIQTIATNYA 111

[Close]

BLAST of CmaCh09G003780 vs. TAIR10
Match: AT1G01250.1 (AT1G01250.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 101.7 bits (252), Expect = 5.5e-22
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 1


Query: 6   GSHSETDDKSDQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQF 65
           G   ET   + ++  Y GVRKR+WGKWVSEIR P  + RIWLGS+  PE AA+A+D A F
Sbjct: 30  GGGKETSSSTTRHPVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAF 89

Query: 66  CLRGPRAKFNFPDSPPEIEGGDRLSAQEIQAAAAKFA 103
           CL+G +A+ NFP+   ++      + ++IQ AAAK A
Sbjct: 90  CLKGRKAQLNFPEEIEDLPRPSTCTPRDIQVAAAKAA 126

[Close]

BLAST of CmaCh09G003780 vs. NCBI nr
Match: gi|659104078|ref|XP_008452799.1| (PREDICTED: ethylene-responsive transcription factor ERF017-like [Cucumis melo])

HSP 1 Score: 250.0 bits (637), Expect = 3.5e-63
Identity = 136/192 (70.83%), Postives = 150/192 (78.12%), Query Frame = 1


Query: 12  DDKSDQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPR 71
           +  +DQ  KYKGVR+RKWGKWVSEIRLPNSRDRIWLGSYDKPE+AARAFDAAQFCLRGP+
Sbjct: 16  NSSADQTSKYKGVRRRKWGKWVSEIRLPNSRDRIWLGSYDKPEKAARAFDAAQFCLRGPQ 75

Query: 72  AKFNFPDSPPEIEGGDRLSAQEIQAAAAKFAGEHGGDEGGDGYCNDEALVGEHSSGAVDG 131
           AKFNFPDSPPEI+GGDRLSAQEIQAAAAK+A EHG  E G G  +DEALV          
Sbjct: 76  AKFNFPDSPPEIDGGDRLSAQEIQAAAAKYAEEHG--EEGVGNDHDEALVTV-------- 135

Query: 132 GDGGGVWPVWDL-LDGGSGFGFDNIMGGNAMICDEDISLGVQEYMEEDEFGD--GGGYFY 191
            +GGGVWP WD+ +DGG  FGF    GGNAMI D +IS  VQE MEE E  D  GG +F 
Sbjct: 136 -EGGGVWPDWDMTMDGGWEFGF----GGNAMIYDGNISFEVQENMEEKEDFDNNGGDHFC 192

Query: 192 HEPNFLWNFDDH 201
           HEPNFLWNFD+H
Sbjct: 196 HEPNFLWNFDNH 192

[Close]

BLAST of CmaCh09G003780 vs. NCBI nr
Match: gi|449447367|ref|XP_004141440.1| (PREDICTED: ethylene-responsive transcription factor ERF017 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 5.6e-61
Identity = 137/204 (67.16%), Postives = 154/204 (75.49%), Query Frame = 1


Query: 1   MEDRRGSHSETDDKSDQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAF 60
           M DR  S S T+     + KYKGVR+RKWGKWVSEIRLPNSRDRIWLGSYDKPE+AARAF
Sbjct: 1   MADRLNS-STTEPNDTSSAKYKGVRRRKWGKWVSEIRLPNSRDRIWLGSYDKPEKAARAF 60

Query: 61  DAAQFCLRGPRAKFNFPDSPPEIEGGDRLSAQEIQAAAAKFAGEHGGDEGGDGYCNDEAL 120
           DAAQFCLRGP+AKFNFPDSPPEI+GGDRLSAQEIQAAAAK+A EHG +EG          
Sbjct: 61  DAAQFCLRGPQAKFNFPDSPPEIDGGDRLSAQEIQAAAAKYAEEHG-EEG---------- 120

Query: 121 VGEHSSGAVDGGDGGGVWPV-WDL-LDGGSGFGFDNIMGGNAMICDEDISLGVQ-EYMEE 180
           VG H  G     +GGGVWP  WD+ +DGG  FGF    GGNAMI   DIS GVQ E ME+
Sbjct: 121 VGNHDEGVTV--EGGGVWPDNWDMTMDGGWEFGF----GGNAMIYGGDISFGVQDENMEK 180

Query: 181 DEF-GDGGGYFYHEPNFLWNFDDH 201
           ++F  +GG +F HEPNFLWNFD+H
Sbjct: 181 EDFDNNGGNHFCHEPNFLWNFDNH 186

[Close]

BLAST of CmaCh09G003780 vs. NCBI nr
Match: gi|629117144|gb|KCW81819.1| (hypothetical protein EUGRSUZ_C03175 [Eucalyptus grandis])

HSP 1 Score: 157.1 bits (396), Expect = 3.1e-35
Identity = 95/196 (48.47%), Postives = 123/196 (62.76%), Query Frame = 1


Query: 20  KYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPRAKFNFPDS 79
           +YKGVR RKWGKWVSEIRLPNSR+RIWLGSYD PE+AARAFDAA +CLRG +A+FNFPDS
Sbjct: 18  RYKGVRLRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDAALYCLRGRQAQFNFPDS 77

Query: 80  PPEIEGGDRLSAQEIQAAAAKFAGEHGGDEGGDGYCNDEALVGEHSSGAV---------D 139
           PP+I G   L+ QEI+A AA+FA + G +  G    ND+     H + ++         +
Sbjct: 78  PPDIAGAQGLTPQEIRAVAARFANQ-GPEGSGRSRRNDDGHGHGHGASSMAAREGGDNGN 137

Query: 140 GGDGGGVWPVWDLLDG------GSGFG-FDNI--MGGNAMICDEDISLGVQEYMEEDEFG 198
           G DGGG    W  L+       GSGFG +D +  +GG+ +    + S     Y  +DE G
Sbjct: 138 GNDGGGSSMDWSFLNALDVDCDGSGFGLYDGLDYVGGSQLEPPPEAS--STTYNADDENG 197

[Close]

BLAST of CmaCh09G003780 vs. NCBI nr
Match: gi|702313281|ref|XP_010051344.1| (PREDICTED: ethylene-responsive transcription factor ERF017-like [Eucalyptus grandis])

HSP 1 Score: 157.1 bits (396), Expect = 3.1e-35
Identity = 95/196 (48.47%), Postives = 123/196 (62.76%), Query Frame = 1


Query: 20  KYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPRAKFNFPDS 79
           +YKGVR RKWGKWVSEIRLPNSR+RIWLGSYD PE+AARAFDAA +CLRG +A+FNFPDS
Sbjct: 59  RYKGVRLRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDAALYCLRGRQAQFNFPDS 118

Query: 80  PPEIEGGDRLSAQEIQAAAAKFAGEHGGDEGGDGYCNDEALVGEHSSGAV---------D 139
           PP+I G   L+ QEI+A AA+FA + G +  G    ND+     H + ++         +
Sbjct: 119 PPDIAGAQGLTPQEIRAVAARFANQ-GPEGSGRSRRNDDGHGHGHGASSMAAREGGDNGN 178

Query: 140 GGDGGGVWPVWDLLDG------GSGFG-FDNI--MGGNAMICDEDISLGVQEYMEEDEFG 198
           G DGGG    W  L+       GSGFG +D +  +GG+ +    + S     Y  +DE G
Sbjct: 179 GNDGGGSSMDWSFLNALDVDCDGSGFGLYDGLDYVGGSQLEPPPEAS--STTYNADDENG 238

[Close]

BLAST of CmaCh09G003780 vs. NCBI nr
Match: gi|410108799|gb|AFV60734.1| (ethylene-responsive transcription factor 2 [Carica papaya])

HSP 1 Score: 153.3 bits (386), Expect = 4.5e-34
Identity = 100/222 (45.05%), Postives = 125/222 (56.31%), Query Frame = 1


Query: 12  DDKSDQNLKYKGVRKRKWGKWVSEIRLPNSRDRIWLGSYDKPEQAARAFDAAQFCLRGPR 71
           ++ +  +LKYKGVRKRKWGKWVSEIRLPNSR+RIWLGSYD PE+AARAFDAA +CLRGP+
Sbjct: 6   NNTTSTDLKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGPQ 65

Query: 72  AKFNFPDSPPEIEGGDRLSAQEIQAAAAKFAGE----------HGGDEGGDGYCNDEALV 131
           AKFNFP++PPEIEGG  +S Q+IQ  A++FA E          H   +G DG  N     
Sbjct: 66  AKFNFPENPPEIEGGRSMSPQQIQLVASRFANEEPQPPVHHHHHHHQDGTDGGDNSSRAN 125

Query: 132 GEHSSGAVDGGDGGGV------------------WPVWDLLDGG---SGFGF-----DNI 191
            E SS +V  G  G V                  W  W++LD G     FGF     +  
Sbjct: 126 IETSSSSVSDGTIGQVESDMNNVFYETCDVNHIDWSYWNMLDSGVTACDFGFVPPPPEPT 185

Query: 192 MGGNAMICDEDISLGVQEYMEEDEFGDGGGYFYHEPNFLWNF 198
           +  N    D+DI+        ED+F +         +FLWNF
Sbjct: 186 IFDNG--DDDDIT-------PEDDFSN--------QSFLWNF 210

The following BLAST results are available for this feature:

BLAST of CmaCh09G003780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF17_ARATH	2.2e-33	71.29	Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF01...	[more]
ERF16_ARATH	5.5e-32	55.81	Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana GN=ERF01...	[more]
ERF18_ARATH	2.3e-30	60.53	Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF01...	[more]
ERF15_ARATH	5.7e-21	53.47	Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF01...	[more]
ERF23_ARATH	9.7e-21	48.45	Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF02...	[more]

BLAST of CmaCh09G003780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L462_CUCSA	3.9e-61	67.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649620 PE=4 SV=1	[more]
A0A059CUB8_EUCGR	2.2e-35	48.47	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03175 PE=4 SV=1	[more]
T1QCN5_CARPA	3.1e-34	45.05	Ethylene-responsive transcription factor 2 OS=Carica papaya GN=ERF2 PE=2 SV=1	[more]
M1D178_SOLTU	5.3e-34	80.23	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030781 PE=4 SV=1	[more]
A0A0K9QIZ0_SPIOL	9.1e-34	61.03	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_173960 PE=4 SV=1	[more]

BLAST of CmaCh09G003780 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G19210.1	1.3e-34	71.29	Integrase-type DNA-binding superfamily protein	[more]
AT5G21960.1	3.1e-33	55.81	Integrase-type DNA-binding superfamily protein	[more]
AT1G74930.1	1.3e-31	60.53	Integrase-type DNA-binding superfamily protein	[more]
AT4G31060.1	3.2e-22	53.47	Integrase-type DNA-binding superfamily protein	[more]
AT1G01250.1	5.5e-22	48.45	Integrase-type DNA-binding superfamily protein	[more]

BLAST of CmaCh09G003780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659104078\|ref\|XP_008452799.1\|	3.5e-63	70.83	PREDICTED: ethylene-responsive transcription factor ERF017-like [Cucumis melo]	[more]
gi\|449447367\|ref\|XP_004141440.1\|	5.6e-61	67.16	PREDICTED: ethylene-responsive transcription factor ERF017 [Cucumis sativus]	[more]
gi\|629117144\|gb\|KCW81819.1\|	3.1e-35	48.47	hypothetical protein EUGRSUZ_C03175 [Eucalyptus grandis]	[more]
gi\|702313281\|ref\|XP_010051344.1\|	3.1e-35	48.47	PREDICTED: ethylene-responsive transcription factor ERF017-like [Eucalyptus gran...	[more]
gi\|410108799\|gb\|AFV60734.1\|	4.5e-34	45.05	ethylene-responsive transcription factor 2 [Carica papaya]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G003780.1	CmaCh09G003780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 43..59 score: 1.1E-8coord: 21..32 score: 1.
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 20..79 score: 3.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 20..69 score: 8.7
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 20..83 score: 2.0
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 20..77 score: 21
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 20..79 score: 3.53
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 10..198 score: 3.6
None	No IPR available	PANTHER	PTHR31985:SF34	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018	coord: 10..198 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G003780	Cucsa.271180	Cucumber (Gy14) v1	cgycmaB0750
CmaCh09G003780	Cla007467	Watermelon (97103) v1	cmawmB027
CmaCh09G003780	Csa4G649620	Cucumber (Chinese Long) v2	cmacuB020
CmaCh09G003780	MELO3C016927	Melon (DHL92) v3.5.1	cmameB040
CmaCh09G003780	ClCG05G015910	Watermelon (Charleston Gray)	cmawcgB022
CmaCh09G003780	CSPI04G25870	Wild cucumber (PI 183967)	cmacpiB020
CmaCh09G003780	CmoCh01G017440	Cucurbita moschata (Rifu)	cmacmoB050
CmaCh09G003780	CmoCh09G003800	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G003780	Lsi04G013720	Bottle gourd (USVL1VR-Ls)	cmalsiB024
CmaCh09G003780	Cp4.1LG02g05660	Cucurbita pepo (Zucchini)	cmacpeB045
CmaCh09G003780	Cp4.1LG06g02720	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G003780	MELO3C016927.2	Melon (DHL92) v3.6.1	cmamedB039
CmaCh09G003780	CsaV3_4G036190	Cucumber (Chinese Long) v3	cmacucB0027
CmaCh09G003780	Cla97C05G096890	Watermelon (97103) v2	cmawmbB027
CmaCh09G003780	Bhi09G002518	Wax gourd	cmawgoB0035
CmaCh09G003780	CsGy4G024180	Cucumber (Gy14) v2	cgybcmaB465
CmaCh09G003780	Carg10731	Silver-seed gourd	carcmaB1065
CmaCh09G003780	Carg02807	Silver-seed gourd	carcmaB0889

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh09G003780	CmaCh01G016910	Cucurbita maxima (Rimu)	cmacmaB051

The following block(s) are covering this gene:

None