CmaCh08G010980 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh08G010980
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	C2H2 and C2HC zinc fingers superfamily protein, putative
Location	Cma_Chr08 : 6831284 .. 6831751 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCAGAAAAATTGAGCAGCAGTTCGGAGAGTTCGAGCGAAGAACAATCTGATCGAGTAAACGAAGATGATTCGGATTCGTTCAGGGTTAAACGTTCATATGGGTGCATATTTTGCAAGCGTGGGTTCACCAACGCTCAAGCTCTTGGAGGGCATATGAATATCCATAGAAAAGATCGAGCCAATAAAGCTAAGCAAATCGCCTCTTTTTGTGTTCCAAGCAAGCAAAGTGAGCCATCAACCTTCGTGAGTACGCCTAATTTTGAGCCACTTTTGGTTGGGTCTAAGGTGAGTTATGAAGCATCGGGTTCGAACCCAGATGGGTACTTCCAAGGACATGGCAACTTGAATATGAACCTTTGGGGGGAAGATTTGAGCCTAAGAATTGAACCAAGTAAGGGGAGGAGAGGGGTTTGGAGCGGCGAGGGTTTGGATTTGGAGCTTCGACTTGGCCATTATCCCTAA

mRNA sequence

ATGGATTCAGAAAAATTGAGCAGCAGTTCGGAGAGTTCGAGCGAAGAACAATCTGATCGAGTAAACGAAGATGATTCGGATTCGTTCAGGGTTAAACGTTCATATGGGTGCATATTTTGCAAGCGTGGGTTCACCAACGCTCAAGCTCTTGGAGGGCATATGAATATCCATAGAAAAGATCGAGCCAATAAAGCTAAGCAAATCGCCTCTTTTTGTGTTCCAAGCAAGCAAAGTGAGCCATCAACCTTCGTGAGTACGCCTAATTTTGAGCCACTTTTGGTTGGGTCTAAGGTGAGTTATGAAGCATCGGGTTCGAACCCAGATGGGTACTTCCAAGGACATGGCAACTTGAATATGAACCTTTGGGGGGAAGATTTGAGCCTAAGAATTGAACCAAGTAAGGGGAGGAGAGGGGTTTGGAGCGGCGAGGGTTTGGATTTGGAGCTTCGACTTGGCCATTATCCCTAA

Coding sequence (CDS)

ATGGATTCAGAAAAATTGAGCAGCAGTTCGGAGAGTTCGAGCGAAGAACAATCTGATCGAGTAAACGAAGATGATTCGGATTCGTTCAGGGTTAAACGTTCATATGGGTGCATATTTTGCAAGCGTGGGTTCACCAACGCTCAAGCTCTTGGAGGGCATATGAATATCCATAGAAAAGATCGAGCCAATAAAGCTAAGCAAATCGCCTCTTTTTGTGTTCCAAGCAAGCAAAGTGAGCCATCAACCTTCGTGAGTACGCCTAATTTTGAGCCACTTTTGGTTGGGTCTAAGGTGAGTTATGAAGCATCGGGTTCGAACCCAGATGGGTACTTCCAAGGACATGGCAACTTGAATATGAACCTTTGGGGGGAAGATTTGAGCCTAAGAATTGAACCAAGTAAGGGGAGGAGAGGGGTTTGGAGCGGCGAGGGTTTGGATTTGGAGCTTCGACTTGGCCATTATCCCTAA

Protein sequence

MDSEKLSSSSESSSEEQSDRVNEDDSDSFRVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQIASFCVPSKQSEPSTFVSTPNFEPLLVGSKVSYEASGSNPDGYFQGHGNLNMNLWGEDLSLRIEPSKGRRGVWSGEGLDLELRLGHYP

Homology

[Close]

BLAST of CmaCh08G010980 vs. Swiss-Prot
Match: SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-08
Identity = 31/57 (54.39%), Postives = 36/57 (63.16%), Query Frame = 1


Query: 33 RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQIASFCVPSKQSEPSTFVSTPNF 90
          RSY C FCKR F +AQALGGHMN+HR+DRA    Q +    PS  S PS     PN+
Sbjct: 45 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQS----PSSSSTPSPPYPNPNY 97

[Close]

BLAST of CmaCh08G010980 vs. Swiss-Prot
Match: RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08
Identity = 34/77 (44.16%), Postives = 43/77 (55.84%), Query Frame = 1


Query: 33  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQIASFCVPSKQSEPSTFVSTPNFEPL 92
           RSY C FC R F +AQALGGHMN+HR+DRA   +Q  S   PS   + +        + L
Sbjct: 53  RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLS---PSSTDQATPPECDRQQQVL 112

Query: 93  LVGSKVSYEASGSNPDG 110
            VGSKV  +     P+G
Sbjct: 113 DVGSKVLVQEETRKPNG 126

[Close]

BLAST of CmaCh08G010980 vs. Swiss-Prot
Match: TAC1_ARATH (Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 1


Query: 1  MDSEKLSSSSESSSEEQSDRVNEDDSDSFRVKRSYGCIFCKRGFTNAQALGGHMNIHRKD 60
          M++ K   +++  S+  S   ++   DS    RSY C FC RGF+NAQALGGHMNIHR+D
Sbjct: 1  MENIKNPKNADDCSDSISKNSHQGVDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRD 60

Query: 61 RANKAKQI 69
          RA   +++
Sbjct: 61 RAKLRQKL 68

[Close]

BLAST of CmaCh08G010980 vs. TrEMBL
Match: A0A0A0LI91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G190770 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-29
Identity = 92/182 (50.55%), Postives = 116/182 (63.74%), Query Frame = 1


Query: 1   MDSEK---LSSSSESSSEEQSDRVN----EDD-------SDSFR---VKRSYGCIFCKRG 60
           MDS++   +S+ S+SSS++Q +++     ED        SD+F    +KRSY CIFCKRG
Sbjct: 1   MDSDQKLEISNCSQSSSDDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRG 60

Query: 61  FTNAQALGGHMNIHRKDRANK-AKQIASFCVPSKQSE---------PSTFVSTPNFEPLL 120
           FTNAQALGGHMNIHRKDR NK  K   SF   S  S          PSTF + P F PLL
Sbjct: 61  FTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFNNIPYFGPLL 120

Query: 121 VGSKVSYEASGSNPDGYFQGHGNLNMNLWGEDLSLRIEPSKGRRGVW-SGEGLDLELRLG 155
             S+V+Y+AS SN  G      + NMNLWG DLSL+I  + GRR +W +G+G+DLELRLG
Sbjct: 121 GESQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLG 177

[Close]

BLAST of CmaCh08G010980 vs. TrEMBL
Match: F6KKF7_MALDO (Transcriptional regulator superman OS=Malus domestica GN=SUP13b PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.4e-20
Identity = 77/188 (40.96%), Postives = 102/188 (54.26%), Query Frame = 1


Query: 1   MDSEKLSSSSESSSEEQSDRVNEDDSDSFRVKRSYGCIFCKRGFTNAQALGGHMNIHRKD 60
           M+S +  S   SSS+E   R ++ DS +  VKRSY C FCKRGFTNAQALGGHMNIHRKD
Sbjct: 1   MESWRPRSPDTSSSDEDQVRDDDHDSGATTVKRSYECTFCKRGFTNAQALGGHMNIHRKD 60

Query: 61  RANKAKQIASFC--------------VPSKQSEPSTFVSTP-------NFEPLL--VGSK 120
           RA KAKQ+ S                +    S    + S P        + P+L  +  +
Sbjct: 61  RA-KAKQLISGTSSLNSNHYSNEDQYISMSTSHHHQYSSAPIPSQGASGYYPVLDQMNYQ 120

Query: 121 VSYEASGSNPD---GYFQGHGN---------LNMNLWGEDLSLRIEPSKGRRGVWSGEGL 154
           + ++ +GSNP    GY     +         +N  LWG +LSLR+E  + RRGV S + +
Sbjct: 121 MYFQPNGSNPRIPYGYDHDDSSVGSRSQSLGMNQELWGANLSLRLEDDEFRRGVRSNDEV 180

[Close]

BLAST of CmaCh08G010980 vs. TrEMBL
Match: A0A061ENL3_THECC (C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=TCM_020819 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-18
Identity = 77/185 (41.62%), Postives = 101/185 (54.59%), Query Frame = 1


Query: 1   MDSEKLSSSSESSSE-EQSDRVNEDDSDSFRVKRSYGCIFCKRGFTNAQALGGHMNIHRK 60
           M+S K  SS  SS E ++ DRV  D + +   KRSY C FCKRGFTNAQALGGHMNIHRK
Sbjct: 1   MESGKQGSSDASSEENDRVDRVKGDTAAT--TKRSYECTFCKRGFTNAQALGGHMNIHRK 60

Query: 61  DRANKAKQIASFCVPSKQSE---------PSTFVSTPNFEPLLVGSKVSY------EASG 120
           DRA KAKQ  S  VPS+            P      P + P+L   +  +       +S 
Sbjct: 61  DRA-KAKQPTSSSVPSEPMNEDYMNPGYLPPISTEPPKYYPVLEAQRNYHMYLQPPVSSP 120

Query: 121 SNPDGYFQGHG---------NLNMNLWGEDLSLRIEPS-----KGRRGVWSGEGLDLELR 156
           + P GY++            ++N  L G +LSL+I P+     + RRG+   + +DLELR
Sbjct: 121 TLPYGYYESDFLVPARSQSLSMNEELLGANLSLQIGPTHVDDREVRRGIIKEDEVDLELR 180

[Close]

BLAST of CmaCh08G010980 vs. TrEMBL
Match: M5Y916_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016491mg PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-17
Identity = 74/187 (39.57%), Postives = 96/187 (51.34%), Query Frame = 1


Query: 7   SSSSESSSEEQSDRVNEDDSDSFRVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAK 66
           S  +  SS+E   + ++ DS S   KRSY C FCKRGFTNAQALGGHMNIHRKDRA KAK
Sbjct: 8   SPETSLSSDEDQVKDHDQDSGSTTAKRSYECTFCKRGFTNAQALGGHMNIHRKDRA-KAK 67

Query: 67  QIAS---------FCVPSKQSEPSTFVSTPNFEPLLVGSKVS---------------YEA 126
           Q+ S         +    + S  ST+     F    + S+                 ++ 
Sbjct: 68  QLVSGTSSLNSNHYSNEDQYSSLSTY-HHQQFSTAPISSQAGSGHYPVVDQRNYQMYFQP 127

Query: 127 SGSNP---------DGYFQGHGNLNMN--LWGEDLSLRIEPS-----KGRRGVWSGEGLD 154
           SGS+P         D     H +L +N  LWG +LSLR  P+     + RRG+ S + +D
Sbjct: 128 SGSSPRIPYGYDHDDSIGSRHPSLGVNQELWGANLSLRFSPNHLEDDEYRRGLRSNDEVD 187

[Close]

BLAST of CmaCh08G010980 vs. TrEMBL
Match: B9HUB7_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0010s08520g PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-17
Identity = 83/190 (43.68%), Postives = 101/190 (53.16%), Query Frame = 1


Query: 1   MDSEKLSSSSESSSEEQSDR---VNEDDSD--SFRVKRSYGCIFCKRGFTNAQALGGHMN 60
           M+S K  SS  SS++E  DR   V ED S   +   KRSY C FCKRGFTNAQALGGHMN
Sbjct: 1   MESAKQQSSGTSSTDENYDRQEQVKEDSSSRTTISAKRSYECSFCKRGFTNAQALGGHMN 60

Query: 61  IHRKDRAN--KAKQIA-SFCVPSKQSE----PSTFV---STP-NFEPLLVGSK---VSYE 120
           IHRKDRAN  K KQ+A S  V SK SE    P   V   S P  + P+    +     ++
Sbjct: 61  IHRKDRANRTKDKQLASSSSVSSKASEEIKNPGYMVPNSSEPTKYYPVSEDQRNYGTYFQ 120

Query: 121 ASGSNP-DGYFQGHG------------NLNMNLWGEDLSLRIEPSK-----GRRGVWSGE 154
             GS+P + Y   HG            ++N  LWG  + L+I  S      G R V   +
Sbjct: 121 QPGSSPREPYSYKHGSHDFLVPRSQSLSMNDELWGTSIGLQIGSSNIQDNGGNRRVSDDD 180

[Close]

BLAST of CmaCh08G010980 vs. TAIR10
Match: AT5G43540.1 (AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 67.8 bits (164), Expect = 6.8e-12
Identity = 38/66 (57.58%), Postives = 44/66 (66.67%), Query Frame = 1


Query: 1  MDSEKLSSSSESSSEEQSDRVNEDDSDSFRVKRSYGCIFCKRGFTNAQALGGHMNIHRKD 60
          M+ E+ SSS+ S +     R     S S   +R Y C FCKRGFTNAQALGGHMNIHR+D
Sbjct: 1  MECERSSSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRD 60

Query: 61 RANKAK 67
          R NKAK
Sbjct: 61 RLNKAK 66

[Close]

BLAST of CmaCh08G010980 vs. TAIR10
Match: AT4G17810.1 (AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-10
Identity = 56/188 (29.79%), Postives = 77/188 (40.96%), Query Frame = 1


Query: 23  EDDSDSFRVK-----------------RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKA 82
           EDD +S+ VK                 RSY C FC+R F +AQALGGHMN+HR+DRA+  
Sbjct: 17  EDDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRASSR 76

Query: 83  KQIASFCVPSKQSEPSTFVSTPNFEPL----LVGSKVSYEASG-------SNPDGYFQGH 142
               S    + +S     +      PL    L+    +    G        NP G F   
Sbjct: 77  AHQGSTVAAAARSGHGGMLLNSCAPPLPTTTLIIQSTASNIEGLSHFYQLQNPSGIFGNS 136

Query: 143 GNLNMNLWGE------------------------DLSLRIEPSKGRRGVWSG---EGLDL 156
           G++ +NL+G                         + S   + S G     +G   + LDL
Sbjct: 137 GDM-VNLYGTTSFPPSNLPFSMLNSPVEVPPRLIEYSTGDDESIGSMKEATGTSVDELDL 196

[Close]

BLAST of CmaCh08G010980 vs. TAIR10
Match: AT3G23130.1 (AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 31/57 (54.39%), Postives = 36/57 (63.16%), Query Frame = 1


Query: 33 RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQIASFCVPSKQSEPSTFVSTPNF 90
          RSY C FCKR F +AQALGGHMN+HR+DRA    Q +    PS  S PS     PN+
Sbjct: 45 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQS----PSSSSTPSPPYPNPNY 97

[Close]

BLAST of CmaCh08G010980 vs. TAIR10
Match: AT3G23140.1 (AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09
Identity = 48/142 (33.80%), Postives = 65/142 (45.77%), Query Frame = 1


Query: 19  DRVNEDDSDSFRVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQIAS-----FCV 78
           D+  +  S S   +R+Y C  CKRGFTN QALGGH NIHR++R       +S     F +
Sbjct: 5   DKQIDSGSGSGENRRTYDCDICKRGFTNPQALGGHNNIHRRERERYPSSSSSSHSFPFSL 64

Query: 79  PSKQSEPST---FVSTPNFEPLLVGSKVSYEASGSNPDGYFQGHGNLNMNLWGEDLSLRI 138
           P     PS+   F + P + P +     SY   GS P      + + N   +G   S R 
Sbjct: 65  PLPSQSPSSSTNFTNPPPYFPTI----ESYLHQGSQP----PINPSHNTQYFGSSSSSR- 124

Query: 139 EPSKGRRGVWSGEGLDLELRLG 153
               GR    +   L+L L LG
Sbjct: 125 --GGGRFAQGASHDLNLSLGLG 135

[Close]

BLAST of CmaCh08G010980 vs. TAIR10
Match: AT5G06070.1 (AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.8e-09
Identity = 34/77 (44.16%), Postives = 43/77 (55.84%), Query Frame = 1


Query: 33  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQIASFCVPSKQSEPSTFVSTPNFEPL 92
           RSY C FC R F +AQALGGHMN+HR+DRA   +Q  S   PS   + +        + L
Sbjct: 53  RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLS---PSSTDQATPPECDRQQQVL 112

Query: 93  LVGSKVSYEASGSNPDG 110
            VGSKV  +     P+G
Sbjct: 113 DVGSKVLVQEETRKPNG 126

[Close]

BLAST of CmaCh08G010980 vs. NCBI nr
Match: gi|659130491|ref|XP_008465201.1| (PREDICTED: transcriptional regulator TAC1 [Cucumis melo])

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-32
Identity = 94/178 (52.81%), Postives = 113/178 (63.48%), Query Frame = 1


Query: 4   EKLSSS--SESSSE---EQSDRVNEDD--------SDSFR---VKRSYGCIFCKRGFTNA 63
           +KL SS  SESSS+   EQS+ + ++D        SD+F    +KRSY CIFCKRGFTNA
Sbjct: 6   QKLGSSNCSESSSDDQLEQSEAITKEDDHDHHHNYSDNFNNIIIKRSYECIFCKRGFTNA 65

Query: 64  QALGGHMNIHRKDRANKAKQIASFCVPSKQSE----------PSTFVSTPNFEPLLVGSK 123
           QALGGHMNIHRKDR NK  +  SF   S  S           PSTF S P F PLL  S+
Sbjct: 66  QALGGHMNIHRKDRPNKPPKTTSFSSSSSSSSSLQSNNQIIGPSTFNSIPYFGPLLSKSQ 125

Query: 124 VSYEASGSNPDGYFQGHGNLNMNLWGEDLSLRIEPSKGRRGVW-SGEGLDLELRLGHY 155
           V Y+AS SN  G      + NMNLWG DLSL+I  + GRR +W +G+G+DLELRLGH+
Sbjct: 126 VDYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH 178

[Close]

BLAST of CmaCh08G010980 vs. NCBI nr
Match: gi|700206501|gb|KGN61620.1| (hypothetical protein Csa_2G190770 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29
Identity = 92/182 (50.55%), Postives = 116/182 (63.74%), Query Frame = 1


Query: 1   MDSEK---LSSSSESSSEEQSDRVN----EDD-------SDSFR---VKRSYGCIFCKRG 60
           MDS++   +S+ S+SSS++Q +++     ED        SD+F    +KRSY CIFCKRG
Sbjct: 1   MDSDQKLEISNCSQSSSDDQLEQLEATTKEDHDHDHHNYSDNFNDIIIKRSYECIFCKRG 60

Query: 61  FTNAQALGGHMNIHRKDRANK-AKQIASFCVPSKQSE---------PSTFVSTPNFEPLL 120
           FTNAQALGGHMNIHRKDR NK  K   SF   S  S          PSTF + P F PLL
Sbjct: 61  FTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFNNIPYFGPLL 120

Query: 121 VGSKVSYEASGSNPDGYFQGHGNLNMNLWGEDLSLRIEPSKGRRGVW-SGEGLDLELRLG 155
             S+V+Y+AS SN  G      + NMNLWG DLSL+I  + GRR +W +G+G+DLELRLG
Sbjct: 121 GESQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLG 177

[Close]

BLAST of CmaCh08G010980 vs. NCBI nr
Match: gi|666875851|ref|NP_001288051.1| (transcriptional regulator SUPERMAN-like [Malus domestica])

HSP 1 Score: 105.9 bits (263), Expect = 6.4e-20
Identity = 77/188 (40.96%), Postives = 102/188 (54.26%), Query Frame = 1


Query: 1   MDSEKLSSSSESSSEEQSDRVNEDDSDSFRVKRSYGCIFCKRGFTNAQALGGHMNIHRKD 60
           M+S +  S   SSS+E   R ++ DS +  VKRSY C FCKRGFTNAQALGGHMNIHRKD
Sbjct: 1   MESWRPRSPDTSSSDEDQVRDDDHDSGATTVKRSYECTFCKRGFTNAQALGGHMNIHRKD 60

Query: 61  RANKAKQIASFC--------------VPSKQSEPSTFVSTP-------NFEPLL--VGSK 120
           RA KAKQ+ S                +    S    + S P        + P+L  +  +
Sbjct: 61  RA-KAKQLISGTSSLNSNHYSNEDQYISMSTSHHHQYSSAPIPSQGASGYYPVLDQMNYQ 120

Query: 121 VSYEASGSNPD---GYFQGHGN---------LNMNLWGEDLSLRIEPSKGRRGVWSGEGL 154
           + ++ +GSNP    GY     +         +N  LWG +LSLR+E  + RRGV S + +
Sbjct: 121 MYFQPNGSNPRIPYGYDHDDSSVGSRSQSLGMNQELWGANLSLRLEDDEFRRGVRSNDEV 180

[Close]

BLAST of CmaCh08G010980 vs. NCBI nr
Match: gi|590659105|ref|XP_007035036.1| (C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 101.3 bits (251), Expect = 1.6e-18
Identity = 77/185 (41.62%), Postives = 101/185 (54.59%), Query Frame = 1


Query: 1   MDSEKLSSSSESSSE-EQSDRVNEDDSDSFRVKRSYGCIFCKRGFTNAQALGGHMNIHRK 60
           M+S K  SS  SS E ++ DRV  D + +   KRSY C FCKRGFTNAQALGGHMNIHRK
Sbjct: 1   MESGKQGSSDASSEENDRVDRVKGDTAAT--TKRSYECTFCKRGFTNAQALGGHMNIHRK 60

Query: 61  DRANKAKQIASFCVPSKQSE---------PSTFVSTPNFEPLLVGSKVSY------EASG 120
           DRA KAKQ  S  VPS+            P      P + P+L   +  +       +S 
Sbjct: 61  DRA-KAKQPTSSSVPSEPMNEDYMNPGYLPPISTEPPKYYPVLEAQRNYHMYLQPPVSSP 120

Query: 121 SNPDGYFQGHG---------NLNMNLWGEDLSLRIEPS-----KGRRGVWSGEGLDLELR 156
           + P GY++            ++N  L G +LSL+I P+     + RRG+   + +DLELR
Sbjct: 121 TLPYGYYESDFLVPARSQSLSMNEELLGANLSLQIGPTHVDDREVRRGIIKEDEVDLELR 180

[Close]

BLAST of CmaCh08G010980 vs. NCBI nr
Match: gi|694399295|ref|XP_009374780.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Pyrus x bretschneideri])

HSP 1 Score: 97.4 bits (241), Expect = 2.3e-17
Identity = 70/188 (37.23%), Postives = 98/188 (52.13%), Query Frame = 1


Query: 1   MDSEKLSSSSESSSEEQSDRVNEDDSDSFRVKRSYGCIFCKRGFTNAQALGGHMNIHRKD 60
           M+S +  +   SSS+E     ++ +S +  VKRSY C FCKRGFTNAQALGGHMNIHRKD
Sbjct: 1   MESWRPRTPETSSSDEDQVTSDDHNSGATTVKRSYECTFCKRGFTNAQALGGHMNIHRKD 60

Query: 61  RANKAKQIA---------------------SFCVPSKQSEPSTFVSTPNFEPLL--VGSK 120
           R    + I+                     S       S P +      + P+L  +  +
Sbjct: 61  RVKPMQHISGTSSLNANHYSNEDQYISMSTSHHHHQYSSAPLSSQGVSGYYPVLDQMNYQ 120

Query: 121 VSYEASGSNPD---GY--------FQGHG-NLNMNLWGEDLSLRIEPSKGRRGVWSGEGL 154
           + ++ +GSNP    GY         + H  ++N  LWG +LSL++E  + RRGV S + +
Sbjct: 121 MYFQPTGSNPRIPYGYDLDDSSVGSRSHSLDMNQELWGTNLSLQLEDDEFRRGVRSNDEV 180

The following BLAST results are available for this feature:

BLAST of CmaCh08G010980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SUP_ARATH	1.9e-08	54.39	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1	[more]
RBE_ARATH	3.3e-08	44.16	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE...	[more]
TAC1_ARATH	2.1e-07	45.59	Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1	[more]

BLAST of CmaCh08G010980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI91_CUCSA	1.1e-29	50.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G190770 PE=4 SV=1	[more]
F6KKF7_MALDO	4.4e-20	40.96	Transcriptional regulator superman OS=Malus domestica GN=SUP13b PE=2 SV=1	[more]
A0A061ENL3_THECC	1.1e-18	41.62	C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=T...	[more]
M5Y916_PRUPE	2.1e-17	39.57	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016491mg PE=4 SV=1	[more]
B9HUB7_POPTR	2.1e-17	43.68	Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0010s08520g PE=4 SV=1	[more]

BLAST of CmaCh08G010980 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G43540.1	6.8e-12	57.58	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT4G17810.1	2.2e-10	29.79	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23130.1	1.1e-09	54.39	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23140.1	1.4e-09	33.80	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G06070.1	1.8e-09	44.16	C2H2 and C2HC zinc fingers superfamily protein	[more]

BLAST of CmaCh08G010980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130491\|ref\|XP_008465201.1\|	4.3e-32	52.81	PREDICTED: transcriptional regulator TAC1 [Cucumis melo]	[more]
gi\|700206501\|gb\|KGN61620.1\|	1.5e-29	50.55	hypothetical protein Csa_2G190770 [Cucumis sativus]	[more]
gi\|666875851\|ref\|NP_001288051.1\|	6.4e-20	40.96	transcriptional regulator SUPERMAN-like [Malus domestica]	[more]
gi\|590659105\|ref\|XP_007035036.1\|	1.6e-18	41.62	C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma cacao]	[more]
gi\|694399295\|ref\|XP_009374780.1\|	2.3e-17	37.23	PREDICTED: transcriptional regulator SUPERMAN-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G010980.1	CmaCh08G010980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 37..57 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 35..62 score: 10
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 10..155 score: 2.8
None	No IPR available	PANTHER	PTHR26374:SF211	SUBFAMILY NOT NAMED	coord: 10..155 score: 2.8
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 33..62 score: 7.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh08G010980	Cucsa.383790	Cucumber (Gy14) v1	cgycmaB1059
CmaCh08G010980	Cla021551	Watermelon (97103) v1	cmawmB869
CmaCh08G010980	Csa3G141860	Cucumber (Chinese Long) v2	cmacuB885
CmaCh08G010980	Csa2G190770	Cucumber (Chinese Long) v2	cmacuB881
CmaCh08G010980	MELO3C006452	Melon (DHL92) v3.5.1	cmameB850
CmaCh08G010980	MELO3C026786	Melon (DHL92) v3.5.1	cmameB845
CmaCh08G010980	ClCG06G006790	Watermelon (Charleston Gray)	cmawcgB804
CmaCh08G010980	CSPI02G10560	Wild cucumber (PI 183967)	cmacpiB899
CmaCh08G010980	CSPI03G12280	Wild cucumber (PI 183967)	cmacpiB903
CmaCh08G010980	CmoCh14G018290	Cucurbita moschata (Rifu)	cmacmoB883
CmaCh08G010980	CmoCh06G013470	Cucurbita moschata (Rifu)	cmacmoB910
CmaCh08G010980	CmoCh08G010730	Cucurbita moschata (Rifu)	cmacmoB912
CmaCh08G010980	CmoCh19G000860	Cucurbita moschata (Rifu)	cmacmoB907
CmaCh08G010980	Lsi05G009980	Bottle gourd (USVL1VR-Ls)	cmalsiB840
CmaCh08G010980	Lsi05G016950	Bottle gourd (USVL1VR-Ls)	cmalsiB839
CmaCh08G010980	Lsi09G012530	Bottle gourd (USVL1VR-Ls)	cmalsiB811
CmaCh08G010980	Cp4.1LG05g01480	Cucurbita pepo (Zucchini)	cmacpeB930
CmaCh08G010980	Cp4.1LG15g00560	Cucurbita pepo (Zucchini)	cmacpeB912
CmaCh08G010980	Cp4.1LG17g01780	Cucurbita pepo (Zucchini)	cmacpeB916
CmaCh08G010980	Cp4.1LG03g10160	Cucurbita pepo (Zucchini)	cmacpeB928
CmaCh08G010980	Cp4.1LG08g03600	Cucurbita pepo (Zucchini)	cmacpeB931
CmaCh08G010980	MELO3C026786.2	Melon (DHL92) v3.6.1	cmamedB946
CmaCh08G010980	MELO3C006452.2	Melon (DHL92) v3.6.1	cmamedB950
CmaCh08G010980	CsaV3_2G012980	Cucumber (Chinese Long) v3	cmacucB1043
CmaCh08G010980	CsaV3_3G012400	Cucumber (Chinese Long) v3	cmacucB1049
CmaCh08G010980	Cla97C05G085430	Watermelon (97103) v2	cmawmbB914
CmaCh08G010980	Cla97C07G129160	Watermelon (97103) v2	cmawmbB927
CmaCh08G010980	Cla97C06G116410	Watermelon (97103) v2	cmawmbB921
CmaCh08G010980	Bhi12G001459	Wax gourd	cmawgoB1090
CmaCh08G010980	Bhi05G000172	Wax gourd	cmawgoB1112
CmaCh08G010980	CsGy3G012410	Cucumber (Gy14) v2	cgybcmaB454
CmaCh08G010980	CsGy2G010570	Cucumber (Gy14) v2	cgybcmaB268
CmaCh08G010980	Carg10949	Silver-seed gourd	carcmaB1495
CmaCh08G010980	Carg06205	Silver-seed gourd	carcmaB1327
CmaCh08G010980	Carg08975	Silver-seed gourd	carcmaB1089
CmaCh08G010980	Carg16866	Silver-seed gourd	carcmaB1052
CmaCh08G010980	Carg16575	Silver-seed gourd	carcmaB0330

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh08G010980	CmaCh14G017920	Cucurbita maxima (Rimu)	cmacmaB296
CmaCh08G010980	CmaCh19G000750	Cucurbita maxima (Rimu)	cmacmaB467
CmaCh08G010980	CmaCh02G017590	Cucurbita maxima (Rimu)	cmacmaB511

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh08G010980	Cucumber (Chinese Long) v3	cmacucB1044
CmaCh08G010980	Watermelon (97103) v2	cmawmbB944
CmaCh08G010980	Cucurbita maxima (Rimu)	cmacmaB373
CmaCh08G010980	Cucurbita maxima (Rimu)	cmacmaB554
CmaCh08G010980	Cucurbita moschata (Rifu)	cmacmoB887
CmaCh08G010980	Cucurbita moschata (Rifu)	cmacmoB909
CmaCh08G010980	Watermelon (Charleston Gray)	cmawcgB795
CmaCh08G010980	Watermelon (Charleston Gray)	cmawcgB811
CmaCh08G010980	Watermelon (97103) v1	cmawmB866
CmaCh08G010980	Watermelon (97103) v1	cmawmB878
CmaCh08G010980	Cucurbita pepo (Zucchini)	cmacpeB895
CmaCh08G010980	Cucumber (Gy14) v2	cgybcmaB269
CmaCh08G010980	Cucumber (Gy14) v2	cgybcmaB976
CmaCh08G010980	Silver-seed gourd	carcmaB0321