CmaCh08G009420 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh08G009420
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	MADS-box transcription factor 6
Location	Cma_Chr08 : 5875347 .. 5877754 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACATTCTCTATCTGTCTAAAACCCCAAATAGGAGAGTAGAGAGAGAAAGGCATTAGGTTAGGGAAATTAAAAAGGAAAAGAGGAATAAACAAAGCAGTGGTGAGGTTTCCATTTTATTGTTAAGGAAGATCTTGTTGTTGTTCTTCATCTCGTTGTTGTTCCTCCTCCCACTTCCCCAAAACCTCATAAACAGCCTCCAATCATTGAACTGAATCGAAAAATGGGGAGAGGAAGAGTTGAACTGAAGCGAATAGAGAACAAAATCAACCGCCAAGTCACTTTCTCCAAGCGCCGTAATGGTCTCCTCAAAAAAGCTTATGAACTCTCTGTTCTTTGCGATGCTGAGGTCGCTCTCATCATCTTCTCCAGCCGCGGCAAGCTCTATGAATTCGGCAGCGCTGGGTAACTAACTAACTTCATTTCTCTCCAGATCTGACACCGCCTCATTTCTTTTTCTTAATCATGTTCTTCACGCCTTCATAGATCCACGCGCTTTCTCTAAACATCAACGAAACCCTACCTAGTTTTTGGGGAAAACTGTTTTTTCTTTTTTCCTTGCCTAGGTTGTTAATCTCCTGTCTCACACATCAGACACACACAGATTCTGTTCCTTAATTTCATCATTCAGACCTTTGTGTATACTTACGGTTCTTCTTCTTCCCACTCAATCTGCTACCTCTTTTGTCTCTTTCTCTTTTCATCCTTCAATCCTTTGGAAATCTTCCTCTCCCTCTCTCTCTCTCTCTCTTTTAATGAATTTAAGTACTTGATTTGTGTTTTTGACATGTTCGTAGTACGACGAAGACACTGGAGCGATACCAACGTTGTTGCTTCTCTCCTCAAGACAATTACAGCGAACGAGAATCCCAGGTTGTTCTTTCTTTCCTCCCTTTCATATCGGTTTTAGTTTTCATCTCGATCGATTCTGCTTCTTAAAGAACCAGATCTCATGTGTTCTTAGATTGAGATAATTAGGATTTAAATGTTCTTACATGATTCAAAGAGTACATATTTTAGCTAGTTGAATTATATTTGAGTGAGTTACTGGAGAATGTGTGTAGGGTTAACGATGTGTTTAATGACACGAATGTGCAGAACTGGTTCGTGGAAATCTCGAAACTGAAAGCTAAATATGAATCGCTATGTCGCACTCATAGGTTCGTAAAAGGGTATCGAAATCGTGTGTATGAATGATTAATTGAGAAGGTTATATTAATAAAGTTTTGGATGATAGGCATTTGCTTGGGGAAGATCTTGGACCATTGAGTGTTAAGGAGCTCCAAAATCTTGAAAAGCAACTCGAAGCAGCTCTTGCTCAAGCTAGACAAAGGAAGGTATTATTATTACTATTCACTTTCTTACCAACTTTTTCTCTCTCTTTTTTAAATTCTATATTTTTTCCTTAAATTTCCATTTTTAATTTTTTTTTTTTAATTACTTATAGAGATTTTAACAACCCTAGATTAATTATTATTATTATATGAAAATTCCTTAATTTAAAACTTTTTAATTTTATTATCCATTGCAGACTCAGATGATGACTGAGCAGATGGAAGATCTACGCAGAAAGGTAAAACAAATTAAAGTTTAAATATTTTTTAATTTTGTTTTTATCATTAATTATTTTTATATAATGATTCGAGTTTTTAAATTTAGGCAATGACATGAAATTTCTTTTAAAAAAACATGCGAATTTTGTTGAAATTTAGAACGGTATTGTAATGGCAGGAACGTCAACTCGGAGATTTGAACCGAGAACTGAAGCTCAAGGTTTGTAATTTGAAAAACTCTTTGCCTAATTGATCTATGAACATATTGAATATCTAACTACTCAGCGTACCATGTGTTTGAGTGATACTTATAGCTCGAGACAGAGGGACAAAATCTTAAAGCCATCCAAAGTTTTTGGAGCTCAAGTTCATCAGCTGCTGAACATGGCAACACCTTCCCGTTGTATCCTTCACAAGCTAGCACCATCGAGTATCAACACGAACCTATCTTACAAATCGGGTATCTCTAAATCCCTCTTTGTCATTGGATCGGGTCGTTGTATGCGTCGAAAATCTACACGAGACAACAAAATATTATTAGTATTGATAATGATTATTTTGGACTAACAGGTACCAAAATTATTTCTCAGAAGAGGGGCCATCTGTTCATATGGGTTATTTGAATTCCACTTAAAAAATAAAAAAAAGACATAGAACTTTAAATTCTTGTTTATCTTTGAATGAATGTTTGGACTAAATATATTATTGTCTATATCTGCTTTATTTGAAAATATGTGGTGTTTGTAAGGTGCTTTAATTACGCTTTTACCCCTACCCATTCTATGTCATTTGGTTTATGTAATCCCTTACATTCATGAAATTATTATTATTTCTAATAATGTGTGGCGTATTATTAA

mRNA sequence

TACATTCTCTATCTGTCTAAAACCCCAAATAGGAGAGTAGAGAGAGAAAGGCATTAGGTTAGGGAAATTAAAAAGGAAAAGAGGAATAAACAAAGCAGTGGTGAGGTTTCCATTTTATTGTTAAGGAAGATCTTGTTGTTGTTCTTCATCTCGTTGTTGTTCCTCCTCCCACTTCCCCAAAACCTCATAAACAGCCTCCAATCATTGAACTGAATCGAAAAATGGGGAGAGGAAGAGTTGAACTGAAGCGAATAGAGAACAAAATCAACCGCCAAGTCACTTTCTCCAAGCGCCGTAATGGTCTCCTCAAAAAAGCTTATGAACTCTCTGTTCTTTGCGATGCTGAGGTCGCTCTCATCATCTTCTCCAGCCGCGGCAAGCTCTATGAATTCGGCAGCGCTGGTACGACGAAGACACTGGAGCGATACCAACGTTGTTGCTTCTCTCCTCAAGACAATTACAGCGAACGAGAATCCCAGAACTGGTTCGTGGAAATCTCGAAACTGAAAGCTAAATATGAATCGCTATGTCGCACTCATAGGCATTTGCTTGGGGAAGATCTTGGACCATTGAGTGTTAAGGAGCTCCAAAATCTTGAAAAGCAACTCGAAGCAGCTCTTGCTCAAGCTAGACAAAGGAAGACTCAGATGATGACTGAGCAGATGGAAGATCTACGCAGAAAGGAACGTCAACTCGGAGATTTGAACCGAGAACTGAAGCTCAAGCTCGAGACAGAGGGACAAAATCTTAAAGCCATCCAAAGTTTTTGGAGCTCAAGTTCATCAGCTGCTGAACATGGCAACACCTTCCCGTTGTATCCTTCACAAGCTAGCACCATCGAGTATCAACACGAACCTATCTTACAAATCGGGTACCAAAATTATTTCTCAGAAGAGGGGCCATCTGTTCATATGGGTTATTTGAATTCCACTTAAAAAATAAAAAAAAGACATAGAACTTTAAATTCTTGTTTATCTTTGAATGAATGTTTGGACTAAATATATTATTGTCTATATCTGCTTTATTTGAAAATATGTGGTGTTTGTAAGGTGCTTTAATTACGCTTTTACCCCTACCCATTCTATGTCATTTGGTTTATGTAATCCCTTACATTCATGAAATTATTATTATTTCTAATAATGTGTGGCGTATTATTAA

Coding sequence (CDS)

ATGGGGAGAGGAAGAGTTGAACTGAAGCGAATAGAGAACAAAATCAACCGCCAAGTCACTTTCTCCAAGCGCCGTAATGGTCTCCTCAAAAAAGCTTATGAACTCTCTGTTCTTTGCGATGCTGAGGTCGCTCTCATCATCTTCTCCAGCCGCGGCAAGCTCTATGAATTCGGCAGCGCTGGTACGACGAAGACACTGGAGCGATACCAACGTTGTTGCTTCTCTCCTCAAGACAATTACAGCGAACGAGAATCCCAGAACTGGTTCGTGGAAATCTCGAAACTGAAAGCTAAATATGAATCGCTATGTCGCACTCATAGGCATTTGCTTGGGGAAGATCTTGGACCATTGAGTGTTAAGGAGCTCCAAAATCTTGAAAAGCAACTCGAAGCAGCTCTTGCTCAAGCTAGACAAAGGAAGACTCAGATGATGACTGAGCAGATGGAAGATCTACGCAGAAAGGAACGTCAACTCGGAGATTTGAACCGAGAACTGAAGCTCAAGCTCGAGACAGAGGGACAAAATCTTAAAGCCATCCAAAGTTTTTGGAGCTCAAGTTCATCAGCTGCTGAACATGGCAACACCTTCCCGTTGTATCCTTCACAAGCTAGCACCATCGAGTATCAACACGAACCTATCTTACAAATCGGGTACCAAAATTATTTCTCAGAAGAGGGGCCATCTGTTCATATGGGTTATTTGAATTCCACTTAA

Protein sequence

MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVKELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQSFWSSSSSAAEHGNTFPLYPSQASTIEYQHEPILQIGYQNYFSEEGPSVHMGYLNST

Homology

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BLAST of CmaCh08G009420 vs. Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.3e-75
Identity = 157/225 (69.78%), Postives = 184/225 (81.78%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQD-NYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSV 120
           G TKTLERYQ CC++ QD N +  E+Q+W+ E+SKLKAK+E+L RT RHLLGEDLGPLSV
Sbjct: 61  GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEG--QNLK 180
           KELQ LEKQLE AL+QARQRKTQ+M EQ+E+LRRKERQLG++NR+LK KLE EG   N +
Sbjct: 121 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYR 180

Query: 181 AIQSFWSSSSSAAEHGNTFPLYPSQASTIEYQHEPILQIGYQNYF 223
           A+Q    +  +  E+G  +   P  ++ ++   EP LQIGY + F
Sbjct: 181 AMQQASWAQGAVVENGAAYVQPPPHSAAMD--SEPTLQIGYPHQF 223

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BLAST of CmaCh08G009420 vs. Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2)

HSP 1 Score: 274.6 bits (701), Expect = 9.9e-73
Identity = 146/230 (63.48%), Postives = 180/230 (78.26%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVE+KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  GTTKTLERYQRCC-FSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSV 120
           G   T+ERY RC   S  +N  E  +Q+W  E++KLK+KYESL RT+R+LLGEDLG + V
Sbjct: 61  GIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAI 180
           KELQ LE+QLEAAL   RQRKTQ+M E+MEDLR+KERQLGD+N++LK+K ETEG   K  
Sbjct: 121 KELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKTF 180

Query: 181 QSFWSSSSSAA---EHGNTFPLYPSQASTIEYQHEPILQIGYQNYFSEEG 227
           Q  W++S+++     + + FP+ PS  + ++   EP LQIG+Q ++  +G
Sbjct: 181 QDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQQHYYVQG 230

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BLAST of CmaCh08G009420 vs. Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2)

HSP 1 Score: 253.8 bits (647), Expect = 1.8e-66
Identity = 146/231 (63.20%), Postives = 169/231 (73.16%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSE---RESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPL 120
           G  KTLE+Y  CC++ Q + S     E Q+W+ E+S+LK K E L R+ RH+LGEDLGPL
Sbjct: 61  GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPL 120

Query: 121 SVKELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQN-- 180
           S+KELQ LEKQLE +L+QARQRKTQ+M EQ++DLRRKERQLG+LN++LK KLE E  +  
Sbjct: 121 SIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEADSSN 180

Query: 181 -LKAIQSFWSSSSSAAEHGNTFPLYPSQASTIEYQHEPILQIGYQNYFSEE 226
              AIQ  W    +    G      P      +   EP LQIGY  +   E
Sbjct: 181 CRSAIQDSW-VHGTVVSGGRVLNAQPPP----DIDCEPTLQIGYYQFVRPE 226

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BLAST of CmaCh08G009420 vs. Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2)

HSP 1 Score: 222.6 bits (566), Expect = 4.5e-57
Identity = 130/231 (56.28%), Postives = 166/231 (71.86%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRG+VE+KRIENKI RQVTFSKR++GLLKKAYELSVLCDAEV+LIIFS+ GKLYEF + 
Sbjct: 1   MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           G  +T+ERY RC  +  DN +  ++Q    E++KLK KYESL RTHR+L+GEDL  +S+K
Sbjct: 61  GVGRTIERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQ LE+QLE AL+  R++KTQ+M EQME+LRRKER+LGD+N   KLKLETE  + K  Q
Sbjct: 121 ELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINN--KLKLETEDHDFKGFQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQASTI-EYQHEPILQIGYQNYFSE-EGPSV 230
               +    A     F L  +  + I +      LQIG+Q ++ + EG SV
Sbjct: 181 DLLLNPVLTAGCSTDFSLQSTHQNYISDCNLGYFLQIGFQQHYEQGEGSSV 229

[Close]

BLAST of CmaCh08G009420 vs. Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 210.3 bits (534), Expect = 2.3e-53
Identity = 133/241 (55.19%), Postives = 165/241 (68.46%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GS 60
           MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  AGTTKTLERYQRCCF-SPQDNYSERESQNWFVEIS------KLKAKYESLCRTHRHLLGE 120
           +   KTLERYQ+C + +P+ N S RE+    +EIS      KLKA+YE+L R+ R+LLGE
Sbjct: 61  SSMLKTLERYQKCNYGAPETNISTREA----LEISSQQEYLKLKARYEALQRSQRNLLGE 120

Query: 121 DLGPLSVKELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETE 180
           DLGPL+ KEL++LE+QL+ +L Q R  +TQ+M +Q++DL+RKE  L + NR LK +L  E
Sbjct: 121 DLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRL-ME 180

Query: 181 GQNLKAIQSFWSSSSSAAEHGNTFPLYPSQASTIEYQHEPILQIGYQN---YFSEEGPSV 231
           G  L      W  ++    +G               + EP LQIGYQN        GPSV
Sbjct: 181 GSTLNL---QWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQNDPITVGGAGPSV 233

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BLAST of CmaCh08G009420 vs. TrEMBL
Match: Q1KTF3_MOMCH (AGAMOUS LIKE6-like protein OS=Momordica charantia GN=AG6 PE=2 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 2.8e-106
Identity = 206/230 (89.57%), Postives = 216/230 (93.91%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GTTKTLERYQRCCFSPQDN+ ER++Q+WF EISKLK KYESLCRT RHLLGEDLGPLSVK
Sbjct: 61  GTTKTLERYQRCCFSPQDNHIERQTQSWFQEISKLKVKYESLCRTQRHLLGEDLGPLSVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAALAQARQRKTQMM +QME LRRKERQLGDLN+EL+LKLE EGQNLKAIQ
Sbjct: 121 ELQNLEKQLEAALAQARQRKTQMMIDQMEALRRKERQLGDLNKELRLKLEAEGQNLKAIQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQASTIEYQHE-PILQIGYQNYFSEEGPSV 230
           SFWSSSS+AA HGN FPL+ SQAS IE QHE P+LQIGYQNYFS EGPSV
Sbjct: 181 SFWSSSSAAAGHGNDFPLHHSQASPIECQHEQPVLQIGYQNYFSAEGPSV 230

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BLAST of CmaCh08G009420 vs. TrEMBL
Match: A0A0A0KCU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076710 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.3e-100
Identity = 192/229 (83.84%), Postives = 209/229 (91.27%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 64  MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 123

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GT+KTLERYQRCCFSPQ N++ERE+QNWF EISKLKAKYESLCRTHRHLLGEDLGPLSVK
Sbjct: 124 GTSKTLERYQRCCFSPQHNFAERETQNWFQEISKLKAKYESLCRTHRHLLGEDLGPLSVK 183

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAAL+QARQRKTQ+M EQME+LR+KERQLG LNRELKLKLE EGQN++ I+
Sbjct: 184 ELQNLEKQLEAALSQARQRKTQIMIEQMENLRKKERQLGILNRELKLKLEAEGQNVRGIE 243

Query: 181 SFWSSSSSAAEHGNTFPL-YPSQASTIEYQHEPILQIGYQNYFSEEGPS 229
           SFWS  S +    N FPL +P Q   I+ QH+P+LQIGYQNYFSEEGPS
Sbjct: 244 SFWSCGSGSGHPNNNFPLHHPLQPDPIDCQHQPLLQIGYQNYFSEEGPS 292

[Close]

BLAST of CmaCh08G009420 vs. TrEMBL
Match: Q8LLR1_VITVI (MADS-box protein 3 OS=Vitis vinifera GN=MADS3 PE=2 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.0e-92
Identity = 183/229 (79.91%), Postives = 206/229 (89.96%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GTTKTLERYQR C++PQDN  E E+Q+W+ E+SKLKAKYESL RT RHLLGEDLGPLSVK
Sbjct: 61  GTTKTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLE ALAQARQRKTQMM EQMEDLRRKERQLGDLN++LKLKLE EGQ+LKAIQ
Sbjct: 121 ELQNLEKQLEGALAQARQRKTQMMIEQMEDLRRKERQLGDLNKQLKLKLEAEGQSLKAIQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQASTIEYQHEPILQIGYQNYFSEEGPSV 230
             W+ S++ A + ++FP++PSQ++ ++ + EPILQIGY +Y   EGPSV
Sbjct: 181 GSWNPSTATAGN-SSFPVHPSQSNPMDCEPEPILQIGYHHYVPAEGPSV 228

[Close]

BLAST of CmaCh08G009420 vs. TrEMBL
Match: A0A061DTT5_THECC (AGAMOUS LIKE6-like protein OS=Theobroma cacao GN=TCM_005458 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 5.1e-92
Identity = 183/229 (79.91%), Postives = 202/229 (88.21%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           G TKTLERYQRCCF+PQDN  ERE+QNW+ E++KLKAKYESL RT RHLLGEDLGPL+VK
Sbjct: 61  GMTKTLERYQRCCFTPQDNSLERETQNWYQEVTKLKAKYESLQRTQRHLLGEDLGPLNVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLE ALA ARQRKTQ+M EQMEDLR+KERQLGDLN++LKLKLE EGQ+LK IQ
Sbjct: 121 ELQNLEKQLEGALALARQRKTQIMIEQMEDLRKKERQLGDLNKQLKLKLEAEGQSLKTIQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQASTIEYQHEPILQIGYQNYFSEEGPSV 230
             W SS +AAE+ N FPL+PS A+ +E   EP+LQIGY ++   EG SV
Sbjct: 181 GLW-SSGAAAENSN-FPLHPSHANPMECDPEPVLQIGYHHFVQAEGSSV 227

[Close]

BLAST of CmaCh08G009420 vs. TrEMBL
Match: A0A0D2QN08_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G093700 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.3e-90
Identity = 178/229 (77.73%), Postives = 199/229 (86.90%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSS 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           G +KTLERYQRCCF+PQDN  ERE+QNW+ E++KLKAKYE+L RT RHLLGEDLGPL+VK
Sbjct: 61  GMSKTLERYQRCCFTPQDNSLERETQNWYQEVTKLKAKYETLQRTQRHLLGEDLGPLNVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLE ALA ARQRKTQ+M EQMEDLR+KER+LGDLN++LK+KLE EGQNLK IQ
Sbjct: 121 ELQNLEKQLEGALALARQRKTQIMIEQMEDLRKKERELGDLNKQLKIKLEAEGQNLKTIQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQASTIEYQHEPILQIGYQNYFSEEGPSV 230
             W SS + AE  N FPL+PS    ++  HEP+LQIGY N+   EG SV
Sbjct: 181 GLW-SSGAVAETSN-FPLHPSHPHPMDCDHEPVLQIGYHNFVQAEGSSV 227

[Close]

BLAST of CmaCh08G009420 vs. TAIR10
Match: AT2G45650.1 (AT2G45650.1 AGAMOUS-like 6)

HSP 1 Score: 274.6 bits (701), Expect = 5.6e-74
Identity = 146/230 (63.48%), Postives = 180/230 (78.26%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVE+KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  GTTKTLERYQRCC-FSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSV 120
           G   T+ERY RC   S  +N  E  +Q+W  E++KLK+KYESL RT+R+LLGEDLG + V
Sbjct: 61  GIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAI 180
           KELQ LE+QLEAAL   RQRKTQ+M E+MEDLR+KERQLGD+N++LK+K ETEG   K  
Sbjct: 121 KELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKTF 180

Query: 181 QSFWSSSSSAA---EHGNTFPLYPSQASTIEYQHEPILQIGYQNYFSEEG 227
           Q  W++S+++     + + FP+ PS  + ++   EP LQIG+Q ++  +G
Sbjct: 181 QDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQQHYYVQG 230

[Close]

BLAST of CmaCh08G009420 vs. TAIR10
Match: AT3G61120.1 (AT3G61120.1 AGAMOUS-like 13)

HSP 1 Score: 222.6 bits (566), Expect = 2.5e-58
Identity = 130/231 (56.28%), Postives = 166/231 (71.86%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRG+VE+KRIENKI RQVTFSKR++GLLKKAYELSVLCDAEV+LIIFS+ GKLYEF + 
Sbjct: 1   MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           G  +T+ERY RC  +  DN +  ++Q    E++KLK KYESL RTHR+L+GEDL  +S+K
Sbjct: 61  GVGRTIERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQ LE+QLE AL+  R++KTQ+M EQME+LRRKER+LGD+N   KLKLETE  + K  Q
Sbjct: 121 ELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINN--KLKLETEDHDFKGFQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQASTI-EYQHEPILQIGYQNYFSE-EGPSV 230
               +    A     F L  +  + I +      LQIG+Q ++ + EG SV
Sbjct: 181 DLLLNPVLTAGCSTDFSLQSTHQNYISDCNLGYFLQIGFQQHYEQGEGSSV 229

[Close]

BLAST of CmaCh08G009420 vs. TAIR10
Match: AT1G24260.2 (AT1G24260.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 202.2 bits (513), Expect = 3.5e-52
Identity = 131/247 (53.04%), Postives = 165/247 (66.80%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GS 60
           MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  AGTTKTLERYQRCCF-SPQDNYSERESQNWFVEIS------KLKAKYESLCRTHRHLLGE 120
           +   +TLERYQ+C + +P+ N   RE+    VE+S      KLK +Y++L RT R+LLGE
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREA--LAVELSSQQEYLKLKERYDALQRTQRNLLGE 120

Query: 121 DLGPLSVKELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETE 180
           DLGPLS KEL++LE+QL+++L Q R  +TQ M +Q+ DL+ KER L + N+ L+L+L   
Sbjct: 121 DLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADG 180

Query: 181 GQ-------NLKAIQSFWSSSSSAAEHGNTFPLYPSQASTIEYQHEPILQIGYQNYFS-- 231
            Q       N + +  +        +H        SQA     + EPILQIGYQ      
Sbjct: 181 YQMPLQLNPNQEEVDHYGRHHHQQQQH--------SQAFFQPLECEPILQIGYQGQQDGM 237

[Close]

BLAST of CmaCh08G009420 vs. TAIR10
Match: AT5G15800.2 (AT5G15800.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 195.3 bits (495), Expect = 4.3e-50
Identity = 109/173 (63.01%), Postives = 134/173 (77.46%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GS 60
           MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  AGTTKTLERYQRCCFS--PQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPL 120
           +   KTL+RYQ+C +     +N   +E +N + E  KLK +YE+L R  R+LLGEDLGPL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 SVKELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLE 171
           + KEL+ LE+QL+ +L Q R  KTQ M +Q+ DL+ KE+ L + NR L +KL+
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLD 173

[Close]

BLAST of CmaCh08G009420 vs. TAIR10
Match: AT3G02310.1 (AT3G02310.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 194.9 bits (494), Expect = 5.6e-50
Identity = 124/234 (52.99%), Postives = 154/234 (65.81%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GS 60
           MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEV+LI+FS+RGKLYEF  +
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  AGTTKTLERYQRCCFS--PQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPL 120
           +   KTLERYQ+C +     +N   +E +N + E  KLK +YE+L R  R+LLGEDLGPL
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 SVKELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETE-GQNL 180
           + KEL+ LE+QL+ +L Q R  KTQ M +Q+ DL+ KE  L D NR L +KLE   G   
Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH 180

Query: 181 KAIQSFWSSSSSA-AEHGNTFPLYPSQASTIEYQHEPILQIGYQNYFSEEGPSV 230
             I   W         +G+  P   SQ      + +P LQIGY +    E  +V
Sbjct: 181 HHIGGGWEGGDQQNIAYGH--PQAHSQGLYQSLECDPTLQIGYSHPVCSEQMAV 232

[Close]

BLAST of CmaCh08G009420 vs. NCBI nr
Match: gi|90995184|gb|ABE03878.1| (AGAMOUS LIKE6-like protein [Momordica charantia])

HSP 1 Score: 392.9 bits (1008), Expect = 4.0e-106
Identity = 206/230 (89.57%), Postives = 216/230 (93.91%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GTTKTLERYQRCCFSPQDN+ ER++Q+WF EISKLK KYESLCRT RHLLGEDLGPLSVK
Sbjct: 61  GTTKTLERYQRCCFSPQDNHIERQTQSWFQEISKLKVKYESLCRTQRHLLGEDLGPLSVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAALAQARQRKTQMM +QME LRRKERQLGDLN+EL+LKLE EGQNLKAIQ
Sbjct: 121 ELQNLEKQLEAALAQARQRKTQMMIDQMEALRRKERQLGDLNKELRLKLEAEGQNLKAIQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQASTIEYQHE-PILQIGYQNYFSEEGPSV 230
           SFWSSSS+AA HGN FPL+ SQAS IE QHE P+LQIGYQNYFS EGPSV
Sbjct: 181 SFWSSSSAAAGHGNDFPLHHSQASPIECQHEQPVLQIGYQNYFSAEGPSV 230

[Close]

BLAST of CmaCh08G009420 vs. NCBI nr
Match: gi|778711111|ref|XP_011656687.1| (PREDICTED: agamous-like MADS-box protein AGL6 [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 3.3e-100
Identity = 192/229 (83.84%), Postives = 209/229 (91.27%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GT+KTLERYQRCCFSPQ N++ERE+QNWF EISKLKAKYESLCRTHRHLLGEDLGPLSVK
Sbjct: 61  GTSKTLERYQRCCFSPQHNFAERETQNWFQEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAAL+QARQRKTQ+M EQME+LR+KERQLG LNRELKLKLE EGQN++ I+
Sbjct: 121 ELQNLEKQLEAALSQARQRKTQIMIEQMENLRKKERQLGILNRELKLKLEAEGQNVRGIE 180

Query: 181 SFWSSSSSAAEHGNTFPL-YPSQASTIEYQHEPILQIGYQNYFSEEGPS 229
           SFWS  S +    N FPL +P Q   I+ QH+P+LQIGYQNYFSEEGPS
Sbjct: 181 SFWSCGSGSGHPNNNFPLHHPLQPDPIDCQHQPLLQIGYQNYFSEEGPS 229

[Close]

BLAST of CmaCh08G009420 vs. NCBI nr
Match: gi|700191018|gb|KGN46222.1| (hypothetical protein Csa_6G076710 [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 3.3e-100
Identity = 192/229 (83.84%), Postives = 209/229 (91.27%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 64  MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 123

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GT+KTLERYQRCCFSPQ N++ERE+QNWF EISKLKAKYESLCRTHRHLLGEDLGPLSVK
Sbjct: 124 GTSKTLERYQRCCFSPQHNFAERETQNWFQEISKLKAKYESLCRTHRHLLGEDLGPLSVK 183

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAAL+QARQRKTQ+M EQME+LR+KERQLG LNRELKLKLE EGQN++ I+
Sbjct: 184 ELQNLEKQLEAALSQARQRKTQIMIEQMENLRKKERQLGILNRELKLKLEAEGQNVRGIE 243

Query: 181 SFWSSSSSAAEHGNTFPL-YPSQASTIEYQHEPILQIGYQNYFSEEGPS 229
           SFWS  S +    N FPL +P Q   I+ QH+P+LQIGYQNYFSEEGPS
Sbjct: 244 SFWSCGSGSGHPNNNFPLHHPLQPDPIDCQHQPLLQIGYQNYFSEEGPS 292

[Close]

BLAST of CmaCh08G009420 vs. NCBI nr
Match: gi|659120341|ref|XP_008460143.1| (PREDICTED: agamous-like MADS-box protein AGL6 [Cucumis melo])

HSP 1 Score: 371.7 bits (953), Expect = 9.5e-100
Identity = 195/231 (84.42%), Postives = 213/231 (92.21%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GT+KTLERYQRCCFSPQ N++ERE+QNWF EISKLKAKYESLCRTHRHLLGEDLGPLSVK
Sbjct: 61  GTSKTLERYQRCCFSPQHNFAERETQNWFQEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAAL+QARQRKTQ+M EQMEDLR+KE QLG+LNRELKLKLE EGQN++ I+
Sbjct: 121 ELQNLEKQLEAALSQARQRKTQIMIEQMEDLRKKELQLGNLNRELKLKLEAEGQNVRGIE 180

Query: 181 SFWS-SSSSAAEH-GNTFPL-YPSQASTIEYQHEPILQIGYQNYFSEEGPS 229
           SFWS +S SA+ H  N FPL +P Q   I+ QH+P+LQIGYQNYFSEEGPS
Sbjct: 181 SFWSCASGSASGHPNNNFPLHHPLQPDPIDCQHQPLLQIGYQNYFSEEGPS 231

[Close]

BLAST of CmaCh08G009420 vs. NCBI nr
Match: gi|526117776|ref|NP_001268111.1| (MADS-box protein 3 [Vitis vinifera])

HSP 1 Score: 347.8 bits (891), Expect = 1.5e-92
Identity = 183/229 (79.91%), Postives = 206/229 (89.96%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GTTKTLERYQR C++PQDN  E E+Q+W+ E+SKLKAKYESL RT RHLLGEDLGPLSVK
Sbjct: 61  GTTKTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLE ALAQARQRKTQMM EQMEDLRRKERQLGDLN++LKLKLE EGQ+LKAIQ
Sbjct: 121 ELQNLEKQLEGALAQARQRKTQMMIEQMEDLRRKERQLGDLNKQLKLKLEAEGQSLKAIQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQASTIEYQHEPILQIGYQNYFSEEGPSV 230
             W+ S++ A + ++FP++PSQ++ ++ + EPILQIGY +Y   EGPSV
Sbjct: 181 GSWNPSTATAGN-SSFPVHPSQSNPMDCEPEPILQIGYHHYVPAEGPSV 228

The following BLAST results are available for this feature:

BLAST of CmaCh08G009420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MADS6_ORYSJ	1.3e-75	69.78	MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV...	[more]
AGL6_ARATH	9.9e-73	63.48	Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2	[more]
MAD17_ORYSJ	1.8e-66	63.20	MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 ...	[more]
AGL13_ARATH	4.5e-57	56.28	Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2	[more]
AGL9_PETHY	2.3e-53	55.19	Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2	[more]

BLAST of CmaCh08G009420 vs. TrEMBL


Match Name	E-value	Identity	Description
Q1KTF3_MOMCH	2.8e-106	89.57	AGAMOUS LIKE6-like protein OS=Momordica charantia GN=AG6 PE=2 SV=1	[more]
A0A0A0KCU5_CUCSA	2.3e-100	83.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076710 PE=4 SV=1	[more]
Q8LLR1_VITVI	1.0e-92	79.91	MADS-box protein 3 OS=Vitis vinifera GN=MADS3 PE=2 SV=1	[more]
A0A061DTT5_THECC	5.1e-92	79.91	AGAMOUS LIKE6-like protein OS=Theobroma cacao GN=TCM_005458 PE=4 SV=1	[more]
A0A0D2QN08_GOSRA	1.3e-90	77.73	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G093700 PE=4 SV=1	[more]

BLAST of CmaCh08G009420 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45650.1	5.6e-74	63.48	AGAMOUS-like 6	[more]
AT3G61120.1	2.5e-58	56.28	AGAMOUS-like 13	[more]
AT1G24260.2	3.5e-52	53.04	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.2	4.3e-50	63.01	K-box region and MADS-box transcription factor family protein	[more]
AT3G02310.1	5.6e-50	52.99	K-box region and MADS-box transcription factor family protein	[more]

BLAST of CmaCh08G009420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|90995184\|gb\|ABE03878.1\|	4.0e-106	89.57	AGAMOUS LIKE6-like protein [Momordica charantia]	[more]
gi\|778711111\|ref\|XP_011656687.1\|	3.3e-100	83.84	PREDICTED: agamous-like MADS-box protein AGL6 [Cucumis sativus]	[more]
gi\|700191018\|gb\|KGN46222.1\|	3.3e-100	83.84	hypothetical protein Csa_6G076710 [Cucumis sativus]	[more]
gi\|659120341\|ref\|XP_008460143.1\|	9.5e-100	84.42	PREDICTED: agamous-like MADS-box protein AGL6 [Cucumis melo]	[more]
gi\|526117776\|ref\|NP_001268111.1\|	1.5e-92	79.91	MADS-box protein 3 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002100	TF_MADSbox
IPR002487	TF_Kbox

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0046983	protein dimerization activity
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G009420.1	CmaCh08G009420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 6.4E-33coord: 38..59 score: 6.4E-33coord: 3..23 score: 6.4
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 score: 2.7
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 score: 1.8
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57 scor
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 1..61 score: 33
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 2..79 score: 2.62
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 82..169 score: 3.3
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 85..175 score: 15
None	No IPR available	unknown	Coil	Coil	coord: 119..171 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..229 score: 2.3E
None	No IPR available	PANTHER	PTHR11945:SF146	AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED	coord: 2..229 score: 2.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh08G009420	Cucsa.362970	Cucumber (Gy14) v1	cgycmaB1013
CmaCh08G009420	Cla006229	Watermelon (97103) v1	cmawmB872
CmaCh08G009420	Cla006943	Watermelon (97103) v1	cmawmB874
CmaCh08G009420	Csa6G076710	Cucumber (Chinese Long) v2	cmacuB895
CmaCh08G009420	MELO3C022516	Melon (DHL92) v3.5.1	cmameB822
CmaCh08G009420	ClCG06G000220	Watermelon (Charleston Gray)	cmawcgB801
CmaCh08G009420	CSPI06G05700	Wild cucumber (PI 183967)	cmacpiB915
CmaCh08G009420	CmoCh08G009110	Cucurbita moschata (Rifu)	cmacmoB912
CmaCh08G009420	Lsi09G019150	Bottle gourd (USVL1VR-Ls)	cmalsiB818
CmaCh08G009420	Lsi05G012800	Bottle gourd (USVL1VR-Ls)	cmalsiB836
CmaCh08G009420	Cp4.1LG17g02480	Cucurbita pepo (Zucchini)	cmacpeB916
CmaCh08G009420	MELO3C022516.2	Melon (DHL92) v3.6.1	cmamedB920
CmaCh08G009420	MELO3C031794.2	Melon (DHL92) v3.6.1	cmamedB954
CmaCh08G009420	CsaV3_3G016620	Cucumber (Chinese Long) v3	cmacucB1060
CmaCh08G009420	CsaV3_6G006010	Cucumber (Chinese Long) v3	cmacucB1065
CmaCh08G009420	Cla97C06G109500	Watermelon (97103) v2	cmawmbB918
CmaCh08G009420	CsGy6G005650	Cucumber (Gy14) v2	cgybcmaB864
CmaCh08G009420	Carg11098	Silver-seed gourd	carcmaB1495

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh08G009420	Silver-seed gourd	carcmaB0321
CmaCh08G009420	Silver-seed gourd	carcmaB0879
CmaCh08G009420	Cucumber (Chinese Long) v3	cmacucB1053
CmaCh08G009420	Watermelon (97103) v2	cmawmbB915
CmaCh08G009420	Cucurbita maxima (Rimu)	cmacmaB299
CmaCh08G009420	Cucurbita maxima (Rimu)	cmacmaB373
CmaCh08G009420	Cucurbita maxima (Rimu)	cmacmaB359
CmaCh08G009420	Cucurbita maxima (Rimu)	cmacmaB556
CmaCh08G009420	Cucumber (Gy14) v1	cgycmaB0733
CmaCh08G009420	Cucurbita moschata (Rifu)	cmacmoB885
CmaCh08G009420	Cucurbita moschata (Rifu)	cmacmoB886
CmaCh08G009420	Cucurbita moschata (Rifu)	cmacmoB887
CmaCh08G009420	Cucurbita moschata (Rifu)	cmacmoB911
CmaCh08G009420	Wild cucumber (PI 183967)	cmacpiB906
CmaCh08G009420	Cucumber (Chinese Long) v2	cmacuB888
CmaCh08G009420	Melon (DHL92) v3.5.1	cmameB851
CmaCh08G009420	Melon (DHL92) v3.5.1	cmameB853
CmaCh08G009420	Watermelon (Charleston Gray)	cmawcgB798
CmaCh08G009420	Watermelon (97103) v1	cmawmB870
CmaCh08G009420	Cucurbita pepo (Zucchini)	cmacpeB895
CmaCh08G009420	Cucumber (Gy14) v2	cgybcmaB459
CmaCh08G009420	Cucumber (Gy14) v2	cgybcmaB463
CmaCh08G009420	Melon (DHL92) v3.6.1	cmamedB951