Carg11098 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11098
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	MADS-box transcription factor
Location	Cucurbita_argyrosperma_scaffold_027 : 988909 .. 991172 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTATTTGCTACCCTACATTCTCTCTCTATCTGAAACCCCAAAGAGGAGAGTAGAGAGAGAAAGGCATTAGGTTAGGGAAATTAAAAAGGAAAAGAGGAATAAACAAAGCAGTGGTGAGGTTTCCATTTTATTGTTAAGGAAGATTTTGTTGTTGTTCTTGTTGTTCTTCATCCTCCCACTTCCCCAAGCTCCATAAACAGCCGCCAAAAATGGGGAGAGGAAGAGTTGAACTGAAGCTAATAGAGAACAAAATCAACCGCCAAGTCACTTTCTCGAAGCGCCGTAATGGTCTCCTCAAAAAAGCTTATGAACTCTCTGTTCTTTGCGATGCTGAGGTCGCTCTCATCATCTTCTCCAGCCGAGGCAAGCTCTATGAATTCGGCAGCGCTGGGTAACTAACTAACTTCATTTCTCTCCAGATCTGACACCGCCTCATTTCTTTTTCTTAATCATGTTCTTCACGCCTTCATAGATCCACGCGCTTTCTCTATACATCAACAAAACCCTACCTAGTTTTTGGGGAAAACTGTTTTTTCTTTTTTCCTTGCCTAGGTTGTTAATCTCCTGTCTCATACATCAGACACACACTGATTCTGTTCCTTAATTTCATCATTCAGACCTTTGTGTATACTTACGATTCTTGCTCTTCCCACTCAATCTGCTACCTCTTTTGTCTCTTTCTCTTTTCATCCTTCAATCCTTTGGCAATCTCCCTCTCCCTCTCTCTCTTTTAATGAATTTTAGTACTTGATTTGTGTTTTTAACATGTTTGTAGTACGACCAAGACACTGGAGCGATACCAACGTTGTTGCTTCTCTCCCCAAGACAATTACAGCGAACGAGAATCCCAGGTTGTTCTTTCTTTCCTCCGATCTCGATCCATTGTGTTCTTATTACGATTGTGTATTAGAATATGATTCAAAGATGTATGGATAATAATTTTTGTTTTGAGTTCAAGCTTCCAATCGAGGATTACTGTCTTAACTAATTGAACTATGTTTGAATGAGTTACTAGAGAATGTTTGTAGAGTTAACAATGTGTTTAATGACACGAATGTGCAGAACTGGTTCGTGGAAATCTCGAAACTGAAAGCTAAATATGAATCGCTATGTCGCACTCATAGGTTCGTAAAAGGGTATCGAAATCGTGTGTATGAATGATTAATTAAGAAGGTTATATAATAAAGTTTTGGATGATAGGCACTTGCTTGGGGAAGATCTTGGACCATTGAGTGTTAAGGAGCTCCAAAATCTTGAAAAGCAACTTGAAGCAGCTCTTGCTCAAGCTAGACAAAGGAAGGTATTATTGTTACTATTCACTTTCTTACCAACTTTTTCTCTCCCTTTTTAAATTATTTTTTCCTTAAATTTCCATTTTTAATTTTTTTTTTATTTTAATTTTATTATCCATTGCAGACTCAGATGATGACGGAACAGATGGAAGATCTACGAAGAAAGGTAAAACAAATTAAAGTTTAAATATTTTTTAATTTTGTTTTTATATAATGAAATTTCTTTTAAAAAAACATGCGAATTAATGGCAGGAACGACAACTCGGGGATCTGAATCGAGAGCTGAAACTCAAGGTTTGTAACTCGAAGAACACTTTGCCTAATTGAACTATGAACATATTGAATATCTAACTACTTAGTGTACTATGTGTTTGAGTGATACTTATAGCTCGAGACAGAGGGACAAAATCTTAAAGCCATCCAAAGTTTTTGGAGCTCAAGTTCATCAGCTGCTGAACATGGCAACACCTTCCCCTTGTATCCTTCACAACCTAGCACCATTGAGTATCAACACGAACCTATCTTACAAATCGGGTATCTCTAAATCCCTCTTTCGGGTCGTTGTATGCGTCGAGAAAAAAAAAAAAAATTATTATTGATGATGATTATTTTGGACTAACAGGTACCAAAATTATTTCTCAGAAGAGGGGCCATCTGTTCATATGGGTTATTTGAATTCCACTTAAAAAGAAAAAAAAAAGACATAGAACTTTAACTTCTTGTTTATCTTTGAATGAATGTTTGGACTAAATATATTATTGTCTATATTTGCTTTATTTGAAAATATGTGGTGTTTGTAATGTGGTTTAATTACGTTTTTACCCCTACCCATTTTATGTCATTTGGTTTATGTAATCCCTTAAATTCATGAAATTATTATTATTATTTCTAATAACGTGTGGCGTATTATTAATATGAAAGATCATTAATGTTATTAATGTCAGTTTGCACTGCTTGTTTGTTATTATG

mRNA sequence

CTCCTATTTGCTACCCTACATTCTCTCTCTATCTGAAACCCCAAAGAGGAGAGTAGAGAGAGAAAGGCATTAGGTTAGGGAAATTAAAAAGGAAAAGAGGAATAAACAAAGCAGTGGTGAGGTTTCCATTTTATTGTTAAGGAAGATTTTGTTGTTGTTCTTGTTGTTCTTCATCCTCCCACTTCCCCAAGCTCCATAAACAGCCGCCAAAAATGGGGAGAGGAAGAGTTGAACTGAAGCTAATAGAGAACAAAATCAACCGCCAAGTCACTTTCTCGAAGCGCCGTAATGGTCTCCTCAAAAAAGCTTATGAACTCTCTGTTCTTTGCGATGCTGAGGTCGCTCTCATCATCTTCTCCAGCCGAGGCAAGCTCTATGAATTCGGCAGCGCTGGTACGACCAAGACACTGGAGCGATACCAACGTTGTTGCTTCTCTCCCCAAGACAATTACAGCGAACGAGAATCCCAGAACTGGTTCGTGGAAATCTCGAAACTGAAAGCTAAATATGAATCGCTATGTCGCACTCATAGGCACTTGCTTGGGGAAGATCTTGGACCATTGAGTGTTAAGGAGCTCCAAAATCTTGAAAAGCAACTTGAAGCAGCTCTTGCTCAAGCTAGACAAAGGAAGACTCAGATGATGACGGAACAGATGGAAGATCTACGAAGAAAGGAACGACAACTCGGGGATCTGAATCGAGAGCTGAAACTCAAGCTCGAGACAGAGGGACAAAATCTTAAAGCCATCCAAAGTTTTTGGAGCTCAAGTTCATCAGCTGCTGAACATGGCAACACCTTCCCCTTGTATCCTTCACAACCTAGCACCATTGAGTATCAACACGAACCTATCTTACAAATCGGGTACCAAAATTATTTCTCAGAAGAGGGGCCATCTGTTCATATGGGTTATTTGAATTCCACTTAAAAAGAAAAAAAAAAGACATAGAACTTTAACTTCTTGTTTATCTTTGAATGAATGTTTGGACTAAATATATTATTGTCTATATTTGCTTTATTTGAAAATATGTGGTGTTTGTAATGTGGTTTAATTACGTTTTTACCCCTACCCATTTTATGTCATTTGGTTTATGTAATCCCTTAAATTCATGAAATTATTATTATTATTTCTAATAACGTGTGGCGTATTATTAATATGAAAGATCATTAATGTTATTAATGTCAGTTTGCACTGCTTGTTTGTTATTATG

Coding sequence (CDS)

ATGGGGAGAGGAAGAGTTGAACTGAAGCTAATAGAGAACAAAATCAACCGCCAAGTCACTTTCTCGAAGCGCCGTAATGGTCTCCTCAAAAAAGCTTATGAACTCTCTGTTCTTTGCGATGCTGAGGTCGCTCTCATCATCTTCTCCAGCCGAGGCAAGCTCTATGAATTCGGCAGCGCTGGTACGACCAAGACACTGGAGCGATACCAACGTTGTTGCTTCTCTCCCCAAGACAATTACAGCGAACGAGAATCCCAGAACTGGTTCGTGGAAATCTCGAAACTGAAAGCTAAATATGAATCGCTATGTCGCACTCATAGGCACTTGCTTGGGGAAGATCTTGGACCATTGAGTGTTAAGGAGCTCCAAAATCTTGAAAAGCAACTTGAAGCAGCTCTTGCTCAAGCTAGACAAAGGAAGACTCAGATGATGACGGAACAGATGGAAGATCTACGAAGAAAGGAACGACAACTCGGGGATCTGAATCGAGAGCTGAAACTCAAGCTCGAGACAGAGGGACAAAATCTTAAAGCCATCCAAAGTTTTTGGAGCTCAAGTTCATCAGCTGCTGAACATGGCAACACCTTCCCCTTGTATCCTTCACAACCTAGCACCATTGAGTATCAACACGAACCTATCTTACAAATCGGGTACCAAAATTATTTCTCAGAAGAGGGGCCATCTGTTCATATGGGTTATTTGAATTCCACTTAA

Protein sequence

MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVKELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQSFWSSSSSAAEHGNTFPLYPSQPSTIEYQHEPILQIGYQNYFSEEGPSVHMGYLNST

Homology

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BLAST of Carg11098 vs. NCBI nr
Match: XP_022964202.1 (MADS-box transcription factor 6 [Cucurbita moschata] >XP_022999841.1 MADS-box transcription factor 6 [Cucurbita maxima] >XP_023515185.1 MADS-box transcription factor 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 457.6 bits (1176), Expect = 2.6e-125
Identity = 235/237 (99.16%), Postives = 235/237 (99.16%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELK IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK
Sbjct: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ
Sbjct: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQPSTIEYQHEPILQIGYQNYFSEEGPSVHMGYLNST 238
           SFWSSSSSAAEHGNTFPLYPSQ STIEYQHEPILQIGYQNYFSEEGPSVHMGYLNST
Sbjct: 181 SFWSSSSSAAEHGNTFPLYPSQASTIEYQHEPILQIGYQNYFSEEGPSVHMGYLNST 237

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BLAST of Carg11098 vs. NCBI nr
Match: XP_022146242.1 (agamous-like MADS-box protein AGL6 [Momordica charantia])

HSP 1 Score: 390.6 bits (1002), Expect = 3.9e-105
Identity = 205/230 (89.13%), Postives = 214/230 (93.04%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELK IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GTTKTLERYQRCCFSPQDN+ ER++Q+WF EISKLK KYESLCRT RHLLGEDLGPLSVK
Sbjct: 61  GTTKTLERYQRCCFSPQDNHIERQTQSWFQEISKLKVKYESLCRTQRHLLGEDLGPLSVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAALAQARQRKTQMM EQME LRRKERQLGDLN+EL+LKLE EGQNLKAIQ
Sbjct: 121 ELQNLEKQLEAALAQARQRKTQMMIEQMEALRRKERQLGDLNKELRLKLEAEGQNLKAIQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQPSTIEYQHE-PILQIGYQNYFSEEGPSV 230
           SFWSSSS+AA HGN FPL+ SQ S IE QHE P+LQIGYQNYFS EGPSV
Sbjct: 181 SFWSSSSAAAGHGNDFPLHHSQASPIECQHEQPVLQIGYQNYFSAEGPSV 230

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BLAST of Carg11098 vs. NCBI nr
Match: ABE03878.1 (AGAMOUS LIKE6-like protein [Momordica charantia])

HSP 1 Score: 389.4 bits (999), Expect = 8.6e-105
Identity = 204/230 (88.70%), Postives = 214/230 (93.04%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELK IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GTTKTLERYQRCCFSPQDN+ ER++Q+WF EISKLK KYESLCRT RHLLGEDLGPLSVK
Sbjct: 61  GTTKTLERYQRCCFSPQDNHIERQTQSWFQEISKLKVKYESLCRTQRHLLGEDLGPLSVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAALAQARQRKTQMM +QME LRRKERQLGDLN+EL+LKLE EGQNLKAIQ
Sbjct: 121 ELQNLEKQLEAALAQARQRKTQMMIDQMEALRRKERQLGDLNKELRLKLEAEGQNLKAIQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQPSTIEYQHE-PILQIGYQNYFSEEGPSV 230
           SFWSSSS+AA HGN FPL+ SQ S IE QHE P+LQIGYQNYFS EGPSV
Sbjct: 181 SFWSSSSAAAGHGNDFPLHHSQASPIECQHEQPVLQIGYQNYFSAEGPSV 230

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BLAST of Carg11098 vs. NCBI nr
Match: KGN46222.1 (hypothetical protein Csa_6G076710 [Cucumis sativus])

HSP 1 Score: 374.4 bits (960), Expect = 2.9e-100
Identity = 192/229 (83.84%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELK IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 64  MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 123

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GT+KTLERYQRCCFSPQ N++ERE+QNWF EISKLKAKYESLCRTHRHLLGEDLGPLSVK
Sbjct: 124 GTSKTLERYQRCCFSPQHNFAERETQNWFQEISKLKAKYESLCRTHRHLLGEDLGPLSVK 183

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAAL+QARQRKTQ+M EQME+LR+KERQLG LNRELKLKLE EGQN++ I+
Sbjct: 184 ELQNLEKQLEAALSQARQRKTQIMIEQMENLRKKERQLGILNRELKLKLEAEGQNVRGIE 243

Query: 181 SFWSSSSSAAEHGNTFPL-YPSQPSTIEYQHEPILQIGYQNYFSEEGPS 229
           SFWS  S +    N FPL +P QP  I+ QH+P+LQIGYQNYFSEEGPS
Sbjct: 244 SFWSCGSGSGHPNNNFPLHHPLQPDPIDCQHQPLLQIGYQNYFSEEGPS 292

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BLAST of Carg11098 vs. NCBI nr
Match: XP_011656687.1 (PREDICTED: agamous-like MADS-box protein AGL6 [Cucumis sativus] >XP_011656689.1 PREDICTED: agamous-like MADS-box protein AGL6 [Cucumis sativus])

HSP 1 Score: 374.4 bits (960), Expect = 2.9e-100
Identity = 192/229 (83.84%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELK IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GT+KTLERYQRCCFSPQ N++ERE+QNWF EISKLKAKYESLCRTHRHLLGEDLGPLSVK
Sbjct: 61  GTSKTLERYQRCCFSPQHNFAERETQNWFQEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAAL+QARQRKTQ+M EQME+LR+KERQLG LNRELKLKLE EGQN++ I+
Sbjct: 121 ELQNLEKQLEAALSQARQRKTQIMIEQMENLRKKERQLGILNRELKLKLEAEGQNVRGIE 180

Query: 181 SFWSSSSSAAEHGNTFPL-YPSQPSTIEYQHEPILQIGYQNYFSEEGPS 229
           SFWS  S +    N FPL +P QP  I+ QH+P+LQIGYQNYFSEEGPS
Sbjct: 181 SFWSCGSGSGHPNNNFPLHHPLQPDPIDCQHQPLLQIGYQNYFSEEGPS 229

[Close]

BLAST of Carg11098 vs. TAIR10
Match: AT2G45650.1 (AGAMOUS-like 6)

HSP 1 Score: 276.2 bits (705), Expect = 1.9e-74
Identity = 146/230 (63.48%), Postives = 180/230 (78.26%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVE+K IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  GTTKTLERYQRCC-FSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSV 120
           G   T+ERY RC   S  +N  E  +Q+W  E++KLK+KYESL RT+R+LLGEDLG + V
Sbjct: 61  GIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAI 180
           KELQ LE+QLEAAL   RQRKTQ+M E+MEDLR+KERQLGD+N++LK+K ETEG   K  
Sbjct: 121 KELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKTF 180

Query: 181 QSFWSSSSSAA---EHGNTFPLYPSQPSTIEYQHEPILQIGYQNYFSEEG 227
           Q  W++S+++     + + FP+ PS P+ ++   EP LQIG+Q ++  +G
Sbjct: 181 QDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQQHYYVQG 230

[Close]

BLAST of Carg11098 vs. TAIR10
Match: AT3G61120.1 (AGAMOUS-like 13)

HSP 1 Score: 220.7 bits (561), Expect = 9.6e-58
Identity = 129/231 (55.84%), Postives = 165/231 (71.43%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRG+VE+K IENKI RQVTFSKR++GLLKKAYELSVLCDAEV+LIIFS+ GKLYEF + 
Sbjct: 1   MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           G  +T+ERY RC  +  DN +  ++Q    E++KLK KYESL RTHR+L+GEDL  +S+K
Sbjct: 61  GVGRTIERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQ LE+QLE AL+  R++KTQ+M EQME+LRRKER+LGD+N   KLKLETE  + K  Q
Sbjct: 121 ELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINN--KLKLETEDHDFKGFQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQPSTI-EYQHEPILQIGYQNYFSE-EGPSV 230
               +    A     F L  +  + I +      LQIG+Q ++ + EG SV
Sbjct: 181 DLLLNPVLTAGCSTDFSLQSTHQNYISDCNLGYFLQIGFQQHYEQGEGSSV 229

[Close]

BLAST of Carg11098 vs. TAIR10
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 194.9 bits (494), Expect = 5.6e-50
Identity = 129/247 (52.23%), Postives = 162/247 (65.59%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GS 60
           MGRGRVELK IENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  AGTTKTLERYQRCCF-SPQDNYSERESQNWFVEIS------KLKAKYESLCRTHRHLLGE 120
           +   +TLERYQ+C + +P+ N   RE+    VE+S      KLK +Y++L RT R+LLGE
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREA--LAVELSSQQEYLKLKERYDALQRTQRNLLGE 120

Query: 121 DLGPLSVKELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETE 180
           DLGPLS KEL++LE+QL+++L Q R  +TQ M +Q+ DL+ KER L + N+ L+L+L   
Sbjct: 121 DLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADG 180

Query: 181 GQ-------NLKAIQSFWSSSSSAAEHGNTFPLYPSQPSTIEYQHEPILQIGYQNYFS-- 231
            Q       N + +  +             F     QP     + EPILQIGYQ      
Sbjct: 181 YQMPLQLNPNQEEVDHYGRXXXXXXXXXQAF----FQP----LECEPILQIGYQGQQDGM 237

[Close]

BLAST of Carg11098 vs. TAIR10
Match: AT5G15800.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-49
Identity = 108/173 (62.43%), Postives = 133/173 (76.88%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GS 60
           MGRGRVELK IENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  AGTTKTLERYQRCCFS--PQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPL 120
           +   KTL+RYQ+C +     +N   +E +N + E  KLK +YE+L R  R+LLGEDLGPL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 SVKELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLE 171
           + KEL+ LE+QL+ +L Q R  KTQ M +Q+ DL+ KE+ L + NR L +KL+
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLD 173

[Close]

BLAST of Carg11098 vs. TAIR10
Match: AT3G02310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 192.6 bits (488), Expect = 2.8e-49
Identity = 123/234 (52.56%), Postives = 153/234 (65.38%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GS 60
           MGRGRVELK IENKINRQVTF+KRRNGLLKKAYELSVLCDAEV+LI+FS+RGKLYEF  +
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  AGTTKTLERYQRCCFS--PQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPL 120
           +   KTLERYQ+C +     +N   +E +N + E  KLK +YE+L R  R+LLGEDLGPL
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 SVKELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETE-GQNL 180
           + KEL+ LE+QL+ +L Q R  KTQ M +Q+ DL+ KE  L D NR L +KLE   G   
Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH 180

Query: 181 KAIQSFWSSSSSA-AEHGNTFPLYPSQPSTIEYQHEPILQIGYQNYFSEEGPSV 230
             I   W         +G+  P   SQ      + +P LQIGY +    E  +V
Sbjct: 181 HHIGGGWEGGDQQNIAYGH--PQAHSQGLYQSLECDPTLQIGYSHPVCSEQMAV 232

[Close]

BLAST of Carg11098 vs. Swiss-Prot
Match: sp|Q6EU39|MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS6 PE=1 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.8e-75
Identity = 157/225 (69.78%), Postives = 181/225 (80.44%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELK IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQD-NYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSV 120
           G TKTLERYQ CC++ QD N +  E+Q+W+ E+SKLKAK+E+L RT RHLLGEDLGPLSV
Sbjct: 61  GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEG--QNLK 180
           KELQ LEKQLE AL+QARQRKTQ+M EQ+E+LRRKERQLG++NR+LK KLE EG   N +
Sbjct: 121 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYR 180

Query: 181 AIQSFWSSSSSAAEHGNTFPLYPSQPSTIEYQHEPILQIGYQNYF 223
           A+Q    +  +  E+G  +   P  P +     EP LQIGY + F
Sbjct: 181 AMQQASWAQGAVVENGAAYVQPP--PHSAAMDSEPTLQIGYPHQF 223

[Close]

BLAST of Carg11098 vs. Swiss-Prot
Match: sp|P29386|AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 SV=2)

HSP 1 Score: 276.2 bits (705), Expect = 3.5e-73
Identity = 146/230 (63.48%), Postives = 180/230 (78.26%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVE+K IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  GTTKTLERYQRCC-FSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSV 120
           G   T+ERY RC   S  +N  E  +Q+W  E++KLK+KYESL RT+R+LLGEDLG + V
Sbjct: 61  GIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGV 120

Query: 121 KELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAI 180
           KELQ LE+QLEAAL   RQRKTQ+M E+MEDLR+KERQLGD+N++LK+K ETEG   K  
Sbjct: 121 KELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKTF 180

Query: 181 QSFWSSSSSAA---EHGNTFPLYPSQPSTIEYQHEPILQIGYQNYFSEEG 227
           Q  W++S+++     + + FP+ PS P+ ++   EP LQIG+Q ++  +G
Sbjct: 181 QDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQQHYYVQG 230

[Close]

BLAST of Carg11098 vs. Swiss-Prot
Match: sp|Q7XUN2|MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS17 PE=1 SV=2)

HSP 1 Score: 253.8 bits (647), Expect = 1.8e-66
Identity = 147/231 (63.64%), Postives = 170/231 (73.59%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELK IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSE---RESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPL 120
           G  KTLE+Y  CC++ Q + S     E Q+W+ E+S+LK K E L R+ RH+LGEDLGPL
Sbjct: 61  GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPL 120

Query: 121 SVKELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQN-- 180
           S+KELQ LEKQLE +L+QARQRKTQ+M EQ++DLRRKERQLG+LN++LK KLE E  +  
Sbjct: 121 SIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEADSSN 180

Query: 181 -LKAIQSFWSSSSSAAEHGNTFPLYPSQPSTIEYQHEPILQIGYQNYFSEE 226
              AIQ  W    +    G      P  P  I+   EP LQIGY  +   E
Sbjct: 181 CRSAIQDSW-VHGTVVSGGRVLNAQP--PPDIDC--EPTLQIGYYQFVRPE 226

[Close]

BLAST of Carg11098 vs. Swiss-Prot
Match: sp|Q38837|AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana OX=3702 GN=AGL13 PE=2 SV=2)

HSP 1 Score: 220.7 bits (561), Expect = 1.7e-56
Identity = 129/231 (55.84%), Postives = 165/231 (71.43%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRG+VE+K IENKI RQVTFSKR++GLLKKAYELSVLCDAEV+LIIFS+ GKLYEF + 
Sbjct: 1   MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           G  +T+ERY RC  +  DN +  ++Q    E++KLK KYESL RTHR+L+GEDL  +S+K
Sbjct: 61  GVGRTIERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQ LE+QLE AL+  R++KTQ+M EQME+LRRKER+LGD+N   KLKLETE  + K  Q
Sbjct: 121 ELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINN--KLKLETEDHDFKGFQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQPSTI-EYQHEPILQIGYQNYFSE-EGPSV 230
               +    A     F L  +  + I +      LQIG+Q ++ + EG SV
Sbjct: 181 DLLLNPVLTAGCSTDFSLQSTHQNYISDCNLGYFLQIGFQQHYEQGEGSSV 229

[Close]

BLAST of Carg11098 vs. Swiss-Prot
Match: sp|Q03489|AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida OX=4102 GN=FBP2 PE=1 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 1.5e-52
Identity = 132/241 (54.77%), Postives = 164/241 (68.05%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GS 60
           MGRGRVELK IENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  AGTTKTLERYQRCCF-SPQDNYSERESQNWFVEIS------KLKAKYESLCRTHRHLLGE 120
           +   KTLERYQ+C + +P+ N S RE+    +EIS      KLKA+YE+L R+ R+LLGE
Sbjct: 61  SSMLKTLERYQKCNYGAPETNISTREA----LEISSQQEYLKLKARYEALQRSQRNLLGE 120

Query: 121 DLGPLSVKELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETE 180
           DLGPL+ KEL++LE+QL+ +L Q R  +TQ+M +Q++DL+RKE  L + NR LK +L  E
Sbjct: 121 DLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRL-ME 180

Query: 181 GQNLKAIQSFWSSSSSAAEHGNTFPLYPSQPSTIEYQHEPILQIGYQN---YFSEEGPSV 231
           G  L      W  ++    +G               + EP LQIGYQN        GPSV
Sbjct: 181 GSTLNL---QWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQNDPITVGGAGPSV 233

[Close]

BLAST of Carg11098 vs. TrEMBL
Match: tr|Q1KTF3|Q1KTF3_MOMCH (AGAMOUS LIKE6-like protein OS=Momordica charantia OX=3673 GN=AG6 PE=2 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 5.7e-105
Identity = 204/230 (88.70%), Postives = 214/230 (93.04%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELK IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GTTKTLERYQRCCFSPQDN+ ER++Q+WF EISKLK KYESLCRT RHLLGEDLGPLSVK
Sbjct: 61  GTTKTLERYQRCCFSPQDNHIERQTQSWFQEISKLKVKYESLCRTQRHLLGEDLGPLSVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAALAQARQRKTQMM +QME LRRKERQLGDLN+EL+LKLE EGQNLKAIQ
Sbjct: 121 ELQNLEKQLEAALAQARQRKTQMMIDQMEALRRKERQLGDLNKELRLKLEAEGQNLKAIQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQPSTIEYQHE-PILQIGYQNYFSEEGPSV 230
           SFWSSSS+AA HGN FPL+ SQ S IE QHE P+LQIGYQNYFS EGPSV
Sbjct: 181 SFWSSSSAAAGHGNDFPLHHSQASPIECQHEQPVLQIGYQNYFSAEGPSV 230

[Close]

BLAST of Carg11098 vs. TrEMBL
Match: tr|A0A0A0KCU5|A0A0A0KCU5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G076710 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.9e-100
Identity = 192/229 (83.84%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELK IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 64  MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 123

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GT+KTLERYQRCCFSPQ N++ERE+QNWF EISKLKAKYESLCRTHRHLLGEDLGPLSVK
Sbjct: 124 GTSKTLERYQRCCFSPQHNFAERETQNWFQEISKLKAKYESLCRTHRHLLGEDLGPLSVK 183

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAAL+QARQRKTQ+M EQME+LR+KERQLG LNRELKLKLE EGQN++ I+
Sbjct: 184 ELQNLEKQLEAALSQARQRKTQIMIEQMENLRKKERQLGILNRELKLKLEAEGQNVRGIE 243

Query: 181 SFWSSSSSAAEHGNTFPL-YPSQPSTIEYQHEPILQIGYQNYFSEEGPS 229
           SFWS  S +    N FPL +P QP  I+ QH+P+LQIGYQNYFSEEGPS
Sbjct: 244 SFWSCGSGSGHPNNNFPLHHPLQPDPIDCQHQPLLQIGYQNYFSEEGPS 292

[Close]

BLAST of Carg11098 vs. TrEMBL
Match: tr|A0A1S3CBY8|A0A1S3CBY8_CUCME (agamous-like MADS-box protein AGL6 OS=Cucumis melo OX=3656 GN=LOC103499043 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 5.5e-100
Identity = 195/231 (84.42%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELK IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GT+KTLERYQRCCFSPQ N++ERE+QNWF EISKLKAKYESLCRTHRHLLGEDLGPLSVK
Sbjct: 61  GTSKTLERYQRCCFSPQHNFAERETQNWFQEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLEAAL+QARQRKTQ+M EQMEDLR+KE QLG+LNRELKLKLE EGQN++ I+
Sbjct: 121 ELQNLEKQLEAALSQARQRKTQIMIEQMEDLRKKELQLGNLNRELKLKLEAEGQNVRGIE 180

Query: 181 SFWS-SSSSAAEH-GNTFPL-YPSQPSTIEYQHEPILQIGYQNYFSEEGPS 229
           SFWS +S SA+ H  N FPL +P QP  I+ QH+P+LQIGYQNYFSEEGPS
Sbjct: 181 SFWSCASGSASGHPNNNFPLHHPLQPDPIDCQHQPLLQIGYQNYFSEEGPS 231

[Close]

BLAST of Carg11098 vs. TrEMBL
Match: tr|Q8LLR1|Q8LLR1_VITVI (MADS-box protein 3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 9.4e-92
Identity = 182/229 (79.48%), Postives = 204/229 (89.08%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELK IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           GTTKTLERYQR C++PQDN  E E+Q+W+ E+SKLKAKYESL RT RHLLGEDLGPLSVK
Sbjct: 61  GTTKTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLE ALAQARQRKTQMM EQMEDLRRKERQLGDLN++LKLKLE EGQ+LKAIQ
Sbjct: 121 ELQNLEKQLEGALAQARQRKTQMMIEQMEDLRRKERQLGDLNKQLKLKLEAEGQSLKAIQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQPSTIEYQHEPILQIGYQNYFSEEGPSV 230
             W+ S++ A + ++FP++PSQ + ++ + EPILQIGY +Y   EGPSV
Sbjct: 181 GSWNPSTATAGN-SSFPVHPSQSNPMDCEPEPILQIGYHHYVPAEGPSV 228

[Close]

BLAST of Carg11098 vs. TrEMBL
Match: tr|A0A0D2QN08|A0A0D2QN08_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G093700 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.0e-90
Identity = 178/229 (77.73%), Postives = 199/229 (86.90%), Query Frame = 0


Query: 1   MGRGRVELKLIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
           MGRGRVELK IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSS 60

Query: 61  GTTKTLERYQRCCFSPQDNYSERESQNWFVEISKLKAKYESLCRTHRHLLGEDLGPLSVK 120
           G +KTLERYQRCCF+PQDN  ERE+QNW+ E++KLKAKYE+L RT RHLLGEDLGPL+VK
Sbjct: 61  GMSKTLERYQRCCFTPQDNSLERETQNWYQEVTKLKAKYETLQRTQRHLLGEDLGPLNVK 120

Query: 121 ELQNLEKQLEAALAQARQRKTQMMTEQMEDLRRKERQLGDLNRELKLKLETEGQNLKAIQ 180
           ELQNLEKQLE ALA ARQRKTQ+M EQMEDLR+KER+LGDLN++LK+KLE EGQNLK IQ
Sbjct: 121 ELQNLEKQLEGALALARQRKTQIMIEQMEDLRKKERELGDLNKQLKIKLEAEGQNLKTIQ 180

Query: 181 SFWSSSSSAAEHGNTFPLYPSQPSTIEYQHEPILQIGYQNYFSEEGPSV 230
             W SS + AE  N FPL+PS P  ++  HEP+LQIGY N+   EG SV
Sbjct: 181 GLW-SSGAVAETSN-FPLHPSHPHPMDCDHEPVLQIGYHNFVQAEGSSV 227

The following BLAST results are available for this feature:

BLAST of Carg11098 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964202.1	2.6e-125	99.16	MADS-box transcription factor 6 [Cucurbita moschata] >XP_022999841.1 MADS-box tr...	[more]
XP_022146242.1	3.9e-105	89.13	agamous-like MADS-box protein AGL6 [Momordica charantia]	[more]
ABE03878.1	8.6e-105	88.70	AGAMOUS LIKE6-like protein [Momordica charantia]	[more]
KGN46222.1	2.9e-100	83.84	hypothetical protein Csa_6G076710 [Cucumis sativus]	[more]
XP_011656687.1	2.9e-100	83.84	PREDICTED: agamous-like MADS-box protein AGL6 [Cucumis sativus] >XP_011656689.1 ...	[more]

BLAST of Carg11098 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45650.1	1.9e-74	63.48	AGAMOUS-like 6	[more]
AT3G61120.1	9.6e-58	55.84	AGAMOUS-like 13	[more]
AT1G24260.2	5.6e-50	52.23	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.2	1.6e-49	62.43	K-box region and MADS-box transcription factor family protein	[more]
AT3G02310.1	2.8e-49	52.56	K-box region and MADS-box transcription factor family protein	[more]

BLAST of Carg11098 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6EU39\|MADS6_ORYSJ	4.8e-75	69.78	MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS...	[more]
sp\|P29386\|AGL6_ARATH	3.5e-73	63.48	Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 ...	[more]
sp\|Q7XUN2\|MAD17_ORYSJ	1.8e-66	63.64	MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
sp\|Q38837\|AGL13_ARATH	1.7e-56	55.84	Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana OX=3702 GN=AGL13 PE=...	[more]
sp\|Q03489\|AGL9_PETHY	1.5e-52	54.77	Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida OX=4102 GN=FBP2 PE...	[more]

BLAST of Carg11098 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|Q1KTF3\|Q1KTF3_MOMCH	5.7e-105	88.70	AGAMOUS LIKE6-like protein OS=Momordica charantia OX=3673 GN=AG6 PE=2 SV=1	[more]
tr\|A0A0A0KCU5\|A0A0A0KCU5_CUCSA	1.9e-100	83.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G076710 PE=4 SV=1	[more]
tr\|A0A1S3CBY8\|A0A1S3CBY8_CUCME	5.5e-100	84.42	agamous-like MADS-box protein AGL6 OS=Cucumis melo OX=3656 GN=LOC103499043 PE=4 ...	[more]
tr\|Q8LLR1\|Q8LLR1_VITVI	9.4e-92	79.48	MADS-box protein 3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=1	[more]
tr\|A0A0D2QN08\|A0A0D2QN08_GOSRA	1.0e-90	77.73	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G093700 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR033896	MADS_MEF2-like
IPR036879	TF_MADSbox_sf
IPR002487	TF_Kbox
IPR002100	TF_MADSbox

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11098-RA	Carg11098-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 119..171
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..229
None	No IPR available	PANTHER	PTHR11945:SF146	AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED	coord: 1..229
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 86.34 coord: 3..23 score: 66.59 coord: 38..59 score: 68.37
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.3E-40 score: 150.9
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..57 e-value: 7.7E-27 score: 92.4
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 32.772
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 82..169 e-value: 2.7E-28 score: 97.9
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 85..175 score: 15.769
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	G3DSA:3.40.1810.10		coord: 13..79 e-value: 2.6E-29 score: 102.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	SSF55455	SRF-like	coord: 2..79
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..72 e-value: 1.71213E-42 score: 139.995

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11098	Cla006943	Watermelon (97103) v1	carwmB1079
Carg11098	Csa6G076710	Cucumber (Chinese Long) v2	carcuB1096
Carg11098	MELO3C022516	Melon (DHL92) v3.5.1	carmeB1043
Carg11098	ClCG06G000220	Watermelon (Charleston Gray)	carwcgB1048
Carg11098	CSPI06G05700	Wild cucumber (PI 183967)	carcpiB1118
Carg11098	Cucsa.362970	Cucumber (Gy14) v1	carcgyB1193
Carg11098	CmaCh08G009420	Cucurbita maxima (Rimu)	carcmaB1495
Carg11098	CmoCh08G009110	Cucurbita moschata (Rifu)	carcmoB1452
Carg11098	Lsi09G019150	Bottle gourd (USVL1VR-Ls)	carlsiB979
Carg11098	Cp4.1LG17g02480	Cucurbita pepo (Zucchini)	carcpeB1503
Carg11098	CsGy6G005650	Cucumber (Gy14) v2	carcgybB1061
Carg11098	MELO3C022516.2	Melon (DHL92) v3.6.1	carmedB1057
Carg11098	CsaV3_6G006010	Cucumber (Chinese Long) v3	carcucB1129
Carg11098	Cla97C06G109500	Watermelon (97103) v2	carwmbB1135

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11098	Silver-seed gourd	carcarB267
Carg11098	Cucurbita maxima (Rimu)	carcmaB1490
Carg11098	Cucurbita moschata (Rifu)	carcmoB1448
Carg11098	Cucurbita pepo (Zucchini)	carcpeB1501
Carg11098	Wild cucumber (PI 183967)	carcpiB1116
Carg11098	Cucumber (Chinese Long) v2	carcuB1094
Carg11098	Cucumber (Chinese Long) v3	carcucB1127
Carg11098	Watermelon (97103) v1	carwmB1076
Carg11098	Watermelon (97103) v2	carwmbB1132