CmaCh08G006220 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAACAAAGATATATTTCAAACACAAAATTCAAAAAACCTTCACTCCATTTTCATCCCCTCTTTCAACACGAACACGAACAAGAACAATTGTGTTCGACTTATGCCTTTGGGGAAATCTTCGGTTTGAGGATGCCATCGATCTTGAACTCATCGAATTTGGTGTTCGCCACAGCGATGGTGGCGTCGAGCACGCTGATGATCCTGGCGTATTTCCGGCATAACAAGGGCGACAGCGCCGCTACCCGACAGGCCGATGTTCGGATTCTTCGGCCTTGTCTCTGTTCAGGTAGAAAATTAAAATTAAATATTTAGAGAAAGCAGAAATTATTGATTTTTGCGTTGCAAACAGGTGGAAATAAAGATCGGAAGAAGAAGCAGAAGAAGGTTCAATTTGCAGAGAATGTGAAGAAGAAAGCGACGGAGGCGGAGGAGATGAAGAGGAAGATCACGGCCAGAAAATTGAAGAAAAATAGATGCAGAAGCAGTTTTCAAGGAAGCCAGATGCCGGAGAATCGTGTCGCTCTTTATAATGGCATTCTCAGAGATCGATCTAATAGAATGGGGTTTTCTTACTGAAATACACACACACAAACACTTTCT CAAAAACAAAGATATATTTCAAACACAAAATTCAAAAAACCTTCACTCCATTTTCATCCCCTCTTTCAACACGAACACGAACAAGAACAATTGTGTTCGACTTATGCCTTTGGGGAAATCTTCGGTTTGAGGATGCCATCGATCTTGAACTCATCGAATTTGGTGTTCGCCACAGCGATGGTGGCGTCGAGCACGCTGATGATCCTGGCGTATTTCCGGCATAACAAGGGCGACAGCGCCGCTACCCGACAGGCCGATGTTCGGATTCTTCGGCCTTGTCTCTGTTCAGGTGGAAATAAAGATCGGAAGAAGAAGCAGAAGAAGGTTCAATTTGCAGAGAATGTGAAGAAGAAAGCGACGGAGGCGGAGGAGATGAAGAGGAAGATCACGGCCAGAAAATTGAAGAAAAATAGATGCAGAAGCAGTTTTCAAGGAAGCCAGATGCCGGAGAATCGTGTCGCTCTTTATAATGGCATTCTCAGAGATCGATCTAATAGAATGGGGTTTTCTTACTGAAATACACACACACAAACACTTTCT ATGCCATCGATCTTGAACTCATCGAATTTGGTGTTCGCCACAGCGATGGTGGCGTCGAGCACGCTGATGATCCTGGCGTATTTCCGGCATAACAAGGGCGACAGCGCCGCTACCCGACAGGCCGATGTTCGGATTCTTCGGCCTTGTCTCTGTTCAGGTGGAAATAAAGATCGGAAGAAGAAGCAGAAGAAGGTTCAATTTGCAGAGAATGTGAAGAAGAAAGCGACGGAGGCGGAGGAGATGAAGAGGAAGATCACGGCCAGAAAATTGAAGAAAAATAGATGCAGAAGCAGTTTTCAAGGAAGCCAGATGCCGGAGAATCGTGTCGCTCTTTATAATGGCATTCTCAGAGATCGATCTAATAGAATGGGGTTTTCTTACTGA MPSILNSSNLVFATAMVASSTLMILAYFRHNKGDSAATRQADVRILRPCLCSGGNKDRKKKQKKVQFAENVKKKATEAEEMKRKITARKLKKNRCRSSFQGSQMPENRVALYNGILRDRSNRMGFSY
BLAST of CmaCh08G006220 vs. TrEMBL
Match: A0A0A0KA62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432590 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.1e-15 Identity = 73/170 (42.94%), Postives = 92/170 (54.12%), Query Frame = 1
BLAST of CmaCh08G006220 vs. TrEMBL
Match: V4MFV8_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10011857mg PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.1e-14 Identity = 58/126 (46.03%), Postives = 74/126 (58.73%), Query Frame = 1
BLAST of CmaCh08G006220 vs. TrEMBL
Match: A0A067GXT7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033125mg PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.1e-14 Identity = 57/129 (44.19%), Postives = 78/129 (60.47%), Query Frame = 1
BLAST of CmaCh08G006220 vs. TrEMBL
Match: V4UP42_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009903mg PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.1e-14 Identity = 57/129 (44.19%), Postives = 78/129 (60.47%), Query Frame = 1
BLAST of CmaCh08G006220 vs. TrEMBL
Match: A0A078HS86_BRANA (BnaC06g05400D protein OS=Brassica napus GN=BnaC06g05400D PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 8.7e-14 Identity = 61/134 (45.52%), Postives = 80/134 (59.70%), Query Frame = 1
BLAST of CmaCh08G006220 vs. TAIR10
Match: AT1G52565.1 (AT1G52565.1 unknown protein) HSP 1 Score: 78.6 bits (192), Expect = 3.2e-15 Identity = 60/133 (45.11%), Postives = 78/133 (58.65%), Query Frame = 1
BLAST of CmaCh08G006220 vs. TAIR10
Match: AT3G15760.1 (AT3G15760.1 unknown protein) HSP 1 Score: 76.3 bits (186), Expect = 1.6e-14 Identity = 56/131 (42.75%), Postives = 73/131 (55.73%), Query Frame = 1
BLAST of CmaCh08G006220 vs. NCBI nr
Match: gi|1009112810|ref|XP_015870257.1| (PREDICTED: uncharacterized protein LOC107407483 [Ziziphus jujuba]) HSP 1 Score: 96.7 bits (239), Expect = 3.2e-17 Identity = 64/141 (45.39%), Postives = 87/141 (61.70%), Query Frame = 1
BLAST of CmaCh08G006220 vs. NCBI nr
Match: gi|700190044|gb|KGN45277.1| (hypothetical protein Csa_7G432590 [Cucumis sativus]) HSP 1 Score: 90.1 bits (222), Expect = 3.0e-15 Identity = 73/170 (42.94%), Postives = 92/170 (54.12%), Query Frame = 1
BLAST of CmaCh08G006220 vs. NCBI nr
Match: gi|567917840|ref|XP_006450926.1| (hypothetical protein CICLE_v10009903mg [Citrus clementina]) HSP 1 Score: 85.5 bits (210), Expect = 7.3e-14 Identity = 57/129 (44.19%), Postives = 78/129 (60.47%), Query Frame = 1
BLAST of CmaCh08G006220 vs. NCBI nr
Match: gi|1021565265|ref|XP_016173991.1| (PREDICTED: uncharacterized protein LOC107616553 [Arachis ipaensis]) HSP 1 Score: 85.5 bits (210), Expect = 7.3e-14 Identity = 58/125 (46.40%), Postives = 79/125 (63.20%), Query Frame = 1
BLAST of CmaCh08G006220 vs. NCBI nr
Match: gi|567132181|ref|XP_006392905.1| (hypothetical protein EUTSA_v10011857mg [Eutrema salsugineum]) HSP 1 Score: 85.5 bits (210), Expect = 7.3e-14 Identity = 58/126 (46.03%), Postives = 74/126 (58.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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