CmaCh07G013590 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh07G013590
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Mitochondria fission 1
Location	Cma_Chr07 : 7737865 .. 7741481 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATCCAATTTCTTCGTCTTTAATCATCTGTTTCGTTTCTTTGTCATTAAGATTCGGTGGAGATTTTATTGTATAAATTGGAAATTTTGATTTTTCTGATATTCACGGAATCATCGGATTTAATGGAAGCAAAAATCGGCAAATTGTTTGAGTCCGTTACTTCGTTCTTCGGCGGTGGCGACCAGATCCCTTGGTGTGATCGTGACGTTATTGCGGTGAGTTTTCTTTTATTCTCTCAGATTCTCGCTTTATCATTACAATTTCTGGTTGGTCTCTGAGAAACCGAAAGAAAGAAATGGAGAAGAACTTGGCTAGGTTAAATGATGTCTTACCTCAAATTTGGCGGATTGGGTGAAGCATAAGCATTCGATTCTCACATTTGTCGATTAATTTTGGCGTGCTTAGATGCATCCCTGAAAAAGGATATGCGGTAGAAGTACTTAAACCCTGTAAAAGAAGAGATTGAATGTCTCCATACAAAAATTGGTGTATAATCGATCCAGGTTTACGCGGTAGAAGTAATTTGAAACCATGGTGAGATTGCAGATTGCAACATTGTATTTGATTTAGATTGCATATTGAAATGCAGGGGTGTGAAAGAGAAGTTGCAGAGGCCAATGAAGGTGCCTCTGAAGAACGCAAGAATGAAAGCATCATGAGGTTATCATGGGCACTTGTTCATTCAAGGCAGTCGGAGGATATTAATCGTGGCATTGCAATGCTTGAAGGTAAATCTTCTGCAAAGAATTTCTATGGGTTTTCTGGAAACAGAACAGTATTGAACTCTGTCTCCCATATTCGTTTTGTTGTCAATTTCTTGGTTAAAAGCTCATCCCTTCCCTTGAGCATACTAATTCAATCCTAAGACCATCTAAACAACTCCCTTTATTTATGACCAACATCCATAACAACTTCCCTAACTAATTACTAGTATATCCCTAATACCATTACTATCACAATCTTGTCATTGATGACTGACATTTATGAGTGACGTTTTGTAGGCTATTAACAATGAACATGGGTGTTTAATTCTTGCTGCTATCTGCTATGACCTGAAAGGCCAGTTTGTGTTCTCGATTATATGAATTGCTTCTGTCATCCAGAAAAATAGTTTCGTTTTTTATTATTCTAAATATAGTTTGACTTCCAAATTTGTGTCATCGAAAATATTTTCATATGCGGTATGTGTGAACTTGGAAACGAGAACTCAAACTCTATAATCAACTTGTCTTGGAATTCAACTAGAAATGAGCTTTGACCTTAAAATGGGAGAAGCTACTTCCAGTTGAAACCTTTTCTTCTTGCTTGATATATATATATTCACATTCTCAAACTTCAGTTTGTAGTTATTTAAGATTAGCCATTTTTCTCAAAGCTTATTATTTTCATGGTTCAGTTTTTAAACTTGGATTAGCATGTCATTTTGCAGCTTCCTTAATCAATGCTAGAACCCCTTTGGACCGGAGGGAGAAACTTTATTTGCTGGCTGTTGGATATTACAGAAGTGGTGAATATGCAAGGAGTCGGCAGCTTGTAGAACAATGTTTAGAGGTTTGTTCTTTCTTAGGCATGCAACTTGGTATTCTGCCAGCTATAAATTCATCGGTGACATCACACATAGTTGCACAATGTCTTGCTTCAATTCCTATCTAATTTAAATGCTTCAGCTTTTAATGTTGTTTGTTAGATCATGCATTTCCTTTCTGAACCATACTTACAAGTTACATGTTGATGAAACCTTAAACTATATCATCATAAGAAGTATAGATACGGACACGAAAAGACATGTTAATGTCTAAAAAAACTAGGACACTGACACGTTGGTTGCGAGTGGTCTGTGTTTCTTGTTAGGGGTTCTATATTTCATAACTTCCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTAAATTTAAATGATTTAGGCTTTTTGTTTCAAAATGTATCCAAGTCGTGTCTAGCTATCTCCAAAATTAAAAAATTAAAAAAAATAAGAAATGTAAAATAGTGTCGTGTCCGAAAGGTGTCCAGATGTATGTGTATCCGACACGTGTCTGAAGCGTGTATTCTTATTCGACACGTGTCTTGTGTCCGAATTTAACCGTATCCGACAAGAATCTGACACAAACACTTAACCTGAACTTAAGTGTCCATGCTTCATAGATATCATCTATGATCCTATTAGTAAAAAGATAATTCCAAAACACATGGTGCACGACTCATCATACTTTTTAATCAATCAAAGACATATTTTGATGAATGAAGGAATGACCCTTGGCGCTGGTTGACTTTGTTATAACTGAATTTCTTGGTTTTTTGTAGATTGCACCTGATTGGAGGCAGGCTTTAGCACTTAAAAAGACTGTGGAAGACCAAATTGGAAAAGGTATAATGAAACATAAAGTACCTTTTCTTGAATCTTTTTTACTGCATCGAATCATATGCTGAAGGAATTTGGTTTGTGTTATGTCGATTTGCAGATGGAATCATCGGTATTGGCATTACAGCTACAGCTGTGGGACTTATAGCTGCTGGTATTGCAGCGGCAGCTAGTCGAAGAGGTTGAAATCTACACACTCACGCCAAAATATGCACACAATTTAAGTGTTTCCCTCAAGAATGGTTGTCTAATATTATCAGTTTCGCCATGATAAGCATGTAATATTATCAGTTTCGCCTCAAGAATGGTTGTCTACTAGGTGACTCCTGTATCTTCTTTTTTTTTCTTTATTTATTTTTCTTTTGTAGGAGAAATAATCTCTGTTTGTATGCATCTTTCCCCAATGTTAATTTTTATTCTAGTGCTGAAAATGTTGGCGAAAGATTTTTGTTTGGAAAAACTAGGTCATACATAAATTACAGGGATTGTTATAGGGTTCTCCCTCCTAGAAAACTTGTATCCCAACTGTTCTAAGAGTTGTCGAACGGACCAAGCTGAAGCTTCGGTCCTACGTTCTTACATGCTATGCTCAAACTTGGTGTTAACTTTTCTGGAAAGTCCTTGCTTATTCTAGAAAATTAACACCTTATGACCTCTGATAGACACTGGAGATGCTTTTTGAGAAACTCTCAAGACAGTGGACATTGACTTGATCACTCGAAACAAGTTTGAAATTGATTGTGCGATGAAGTTGATATATGGACAAAATCTTCTCATTTTATTGAGAATGGTTGCTAGTAGCTCACAAGATGGGGATAGGGACCTAAAAGAACAGTATCATGCCTAATCTTCAAGTACCACTTAGGCAAGAATTTATAGTTCAATCTTGTTATTATCTCTTTTAGTTCAATCATATCAGCTCATTACGATCTAAATAAGTACATTGTAAAGTGAACAGGTGCATTATAAAGAAAGAAGATAGATTTTCTTCTCAAA

mRNA sequence

AAAATCCAATTTCTTCGTCTTTAATCATCTGTTTCGTTTCTTTGTCATTAAGATTCGGTGGAGATTTTATTGTATAAATTGGAAATTTTGATTTTTCTGATATTCACGGAATCATCGGATTTAATGGAAGCAAAAATCGGCAAATTGTTTGAGTCCGTTACTTCGTTCTTCGGCGGTGGCGACCAGATCCCTTGGTGTGATCGTGACGTTATTGCGGGGTGTGAAAGAGAAGTTGCAGAGGCCAATGAAGGTGCCTCTGAAGAACGCAAGAATGAAAGCATCATGAGGTTATCATGGGCACTTGTTCATTCAAGGCAGTCGGAGGATATTAATCGTGGCATTGCAATGCTTGAAGCTTCCTTAATCAATGCTAGAACCCCTTTGGACCGGAGGGAGAAACTTTATTTGCTGGCTGTTGGATATTACAGAAGTGGTGAATATGCAAGGAGTCGGCAGCTTGTAGAACAATGTTTAGAGATTGCACCTGATTGGAGGCAGGCTTTAGCACTTAAAAAGACTGTGGAAGACCAAATTGGAAAAGATGGAATCATCGGTATTGGCATTACAGCTACAGCTGTGGGACTTATAGCTGCTGGTATTGCAGCGGCAGCTAGTCGAAGAGGTTGAAATCTACACACTCACGCCAAAATATGCACACAATTTAAGTGTTTCCCTCAAGAATGGTTGTCTAATATTATCAGTTTCGCCATGATAAGCATGTAATATTATCAGTTTCGCCTCAAGAATGGTTGTCTACTAGGTGACTCCTGTATCTTCTTTTTTTTTCTTTATTTATTTTTCTTTTGTAGGAGAAATAATCTCTGTTTGTATGCATCTTTCCCCAATGTTAATTTTTATTCTAGTGCTGAAAATGTTGGCGAAAGATTTTTGTTTGGAAAAACTAGGTCATACATAAATTACAGGGATTGTTATAGGGTTCTCCCTCCTAGAAAACTTGTATCCCAACTGTTCTAAGAGTTGTCGAACGGACCAAGCTGAAGCTTCGGTCCTACGTTCTTACATGCTATGCTCAAACTTGGTGTTAACTTTTCTGGAAAGTCCTTGCTTATTCTAGAAAATTAACACCTTATGACCTCTGATAGACACTGGAGATGCTTTTTGAGAAACTCTCAAGACAGTGGACATTGACTTGATCACTCGAAACAAGTTTGAAATTGATTGTGCGATGAAGTTGATATATGGACAAAATCTTCTCATTTTATTGAGAATGGTTGCTAGTAGCTCACAAGATGGGGATAGGGACCTAAAAGAACAGTATCATGCCTAATCTTCAAGTACCACTTAGGCAAGAATTTATAGTTCAATCTTGTTATTATCTCTTTTAGTTCAATCATATCAGCTCATTACGATCTAAATAAGTACATTGTAAAGTGAACAGGTGCATTATAAAGAAAGAAGATAGATTTTCTTCTCAAA

Coding sequence (CDS)

ATGGAAGCAAAAATCGGCAAATTGTTTGAGTCCGTTACTTCGTTCTTCGGCGGTGGCGACCAGATCCCTTGGTGTGATCGTGACGTTATTGCGGGGTGTGAAAGAGAAGTTGCAGAGGCCAATGAAGGTGCCTCTGAAGAACGCAAGAATGAAAGCATCATGAGGTTATCATGGGCACTTGTTCATTCAAGGCAGTCGGAGGATATTAATCGTGGCATTGCAATGCTTGAAGCTTCCTTAATCAATGCTAGAACCCCTTTGGACCGGAGGGAGAAACTTTATTTGCTGGCTGTTGGATATTACAGAAGTGGTGAATATGCAAGGAGTCGGCAGCTTGTAGAACAATGTTTAGAGATTGCACCTGATTGGAGGCAGGCTTTAGCACTTAAAAAGACTGTGGAAGACCAAATTGGAAAAGATGGAATCATCGGTATTGGCATTACAGCTACAGCTGTGGGACTTATAGCTGCTGGTATTGCAGCGGCAGCTAGTCGAAGAGGTTGA

Protein sequence

MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWALVHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIAPDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRRG

Homology

[Close]

BLAST of CmaCh07G013590 vs. Swiss-Prot
Match: FIS1A_ARATH (Mitochondrial fission 1 protein A OS=Arabidopsis thaliana GN=FIS1A PE=1 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.8e-61
Identity = 118/169 (69.82%), Postives = 141/169 (83.43%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60
           M+AKIG+ F+SV +FF G D+IPWCD DVIAGCEREV EA +  +E+ K E +MRLSWAL
Sbjct: 1   MDAKIGQFFDSVGTFFSGSDKIPWCDGDVIAGCEREVREATDSGTEDLKKECLMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120
           VHSRQ+ED+ RGIAMLEASL ++  PL+ REKLYLLAVGYYRSG Y+RSRQLV++C+E+ 
Sbjct: 61  VHSRQTEDVQRGIAMLEASLESSAPPLEDREKLYLLAVGYYRSGNYSRSRQLVDRCIEMQ 120

Query: 121 PDWRQALALKKTVEDQIGKDGIIGIGITAT---AVGLIAAGIAAAASRR 167
            DWRQAL LKKT+ED+I KDG+IGIGITAT   AVGLIA GI AA SR+
Sbjct: 121 ADWRQALVLKKTIEDKITKDGVIGIGITATAFGAVGLIAGGIVAAMSRK 169

[Close]

BLAST of CmaCh07G013590 vs. Swiss-Prot
Match: FIS1B_ARATH (Mitochondrial fission 1 protein B OS=Arabidopsis thaliana GN=FIS1B PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.3e-47
Identity = 99/170 (58.24%), Postives = 128/170 (75.29%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGG-----DQIPWCDRDVIAGCEREVAEANEGASEERKNESIMR 60
           M+A IGK+F+SV+ FF G      D+ P CD D+I+GCE+E+AEA +   E RK E IMR
Sbjct: 1   MDAAIGKVFDSVSDFFSGAASASADEFPLCDSDIISGCEKELAEAQD---EGRKKECIMR 60

Query: 61  LSWALVHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQ 120
           LSWALVHS+   DI RGIAMLEA ++N  + +  REKLYLLA+GYYRSG+++RSR  +E+
Sbjct: 61  LSWALVHSKMPSDIQRGIAMLEALVVNDTSAMKLREKLYLLALGYYRSGDFSRSRDCIER 120

Query: 121 CLEIAPDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASR 166
           CLE+ P+  QA ALKK +ED+I KDG+IG+GI  TAVG++ AGIAAA  R
Sbjct: 121 CLEVEPESGQAQALKKAIEDRIVKDGVIGVGIAVTAVGVV-AGIAAAILR 166

[Close]

BLAST of CmaCh07G013590 vs. Swiss-Prot
Match: FIS1_YARLI (Mitochondria fission 1 protein OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=FIS1 PE=3 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 2.4e-12
Identity = 41/110 (37.27%), Postives = 67/110 (60.91%), Query Frame = 1


Query: 57  SWALVHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQC 116
           +W L+ SR+ ED   G+ +L  + +   TP  RRE LY LA+G Y+ GEY  +R+  +  
Sbjct: 45  AWGLIKSRKVEDQQLGVQIL--AQVYKDTPSRRRECLYYLAIGSYKLGEYTDARKYCDLL 104

Query: 117 LEIAPDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRR 167
           L+I PD  Q+  L++ +ED++ K+G+IGI I    + + AA + A  S++
Sbjct: 105 LQIEPDDPQSAKLRQIIEDKLAKEGMIGIAIVGGVIAVGAAVLGAVLSQK 152

[Close]

BLAST of CmaCh07G013590 vs. Swiss-Prot
Match: FIS1_ASHGO (Mitochondria fission 1 protein OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=FIS1 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.8e-10
Identity = 42/117 (35.90%), Postives = 62/117 (52.99%), Query Frame = 1


Query: 51  ESIMRLSWALVHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSR 110
           +S    +W LV S  +ED   G+ +L    I   +P+ RRE LY LA+G Y+ GEYA ++
Sbjct: 40  QSRFNYAWGLVKSHDAEDQRLGVKLLTD--IYKESPMRRRESLYYLAIGCYKLGEYAMAK 99

Query: 111 QLVEQCLEIAPDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRRG 168
           +  +  +   PD  QA  LK  VE +I  +G+ G         L+ AG+AA A+  G
Sbjct: 100 RYADALVAHEPDNAQARTLKAMVEQKIQTEGLKG-------AALVGAGLAAVAAAAG 147

[Close]

BLAST of CmaCh07G013590 vs. Swiss-Prot
Match: FIS1_MOUSE (Mitochondrial fission 1 protein OS=Mus musculus GN=Fis1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09
Identity = 42/127 (33.07%), Postives = 70/127 (55.12%), Query Frame = 1


Query: 41  NEGASEERKNESIMRLSWALVHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGY 100
           +E A+      +    +W LV S+ +EDI RGI +LE  L+   +  ++R+ ++ LAVG 
Sbjct: 23  SEQAAGSVSKSTQFEYAWCLVRSKYNEDIRRGIVLLE-ELLPKGSKEEQRDYVFYLAVGN 82

Query: 101 YRSGEYARSRQLVEQCLEIAPDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIA 160
           YR  EY ++ + V   L+  P   QA  L++ ++  + KDG++G+ I    VG +A G+A
Sbjct: 83  YRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKKDGLVGMAI----VGGMALGVA 142

Query: 161 AAASRRG 168
             A   G
Sbjct: 143 GLAGLIG 144

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BLAST of CmaCh07G013590 vs. TrEMBL
Match: A0A0A0KY38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G353620 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.3e-78
Identity = 154/166 (92.77%), Postives = 158/166 (95.18%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60
           MEAKIGKLFESV SFFGGGDQIPWCDRDVI GCEREVAEA+E ASEERKNESIMRLSWAL
Sbjct: 1   MEAKIGKLFESVCSFFGGGDQIPWCDRDVITGCEREVAEADESASEERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120
           VHSRQSEDINRGIAMLEASL  +RTPL +REKLYLLAVGYYRSGEYARSRQLVEQCLEIA
Sbjct: 61  VHSRQSEDINRGIAMLEASLTISRTPLQQREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120

Query: 121 PDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRR 167
           PDWRQAL LKKTVEDQI KDG+IGIGITATAVGLIAAGIAAAASRR
Sbjct: 121 PDWRQALTLKKTVEDQIAKDGVIGIGITATAVGLIAAGIAAAASRR 166

[Close]

BLAST of CmaCh07G013590 vs. TrEMBL
Match: W9QM44_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005229 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.7e-70
Identity = 134/166 (80.72%), Postives = 150/166 (90.36%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60
           MEAKIGK FESV SFFGGGDQIPWCDRDVI GCEREVA+A  G S+ERKNESIMRLSWAL
Sbjct: 1   MEAKIGKFFESVGSFFGGGDQIPWCDRDVILGCEREVADATNGGSDERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120
           VHSRQ ED+ RG+AMLEASL N+ +PL++REK YLLAVGYYR+ EY++SRQL+EQCLEIA
Sbjct: 61  VHSRQPEDVRRGVAMLEASLTNSSSPLEQREKFYLLAVGYYRTSEYSKSRQLLEQCLEIA 120

Query: 121 PDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRR 167
           PDWRQALALKKTVED+I KDG+IGIGI ATAVGLIA GIAAA +R+
Sbjct: 121 PDWRQALALKKTVEDRIAKDGVIGIGIAATAVGLIAGGIAAALARK 166

[Close]

BLAST of CmaCh07G013590 vs. TrEMBL
Match: A0A061EVC0_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TCM_024386 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 8.6e-70
Identity = 136/166 (81.93%), Postives = 149/166 (89.76%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60
           MEAKIGK FESV SFFGG DQIPWCDRD+I  CEREVA+A +G  EE K+ESIMRLSWAL
Sbjct: 1   MEAKIGKFFESVGSFFGGADQIPWCDRDIIVACEREVADAAKGDLEELKSESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120
           VHSRQ+ED+ RGIAMLEASL N+ +PL  REKLYLLAVGYYR+GEY+RSRQLVEQCLEIA
Sbjct: 61  VHSRQAEDVQRGIAMLEASLANSSSPLQHREKLYLLAVGYYRTGEYSRSRQLVEQCLEIA 120

Query: 121 PDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRR 167
           PDWRQALALKKTVED+I KDG+IGIGITATAVGLIA GIAAA SR+
Sbjct: 121 PDWRQALALKKTVEDRIAKDGVIGIGITATAVGLIAGGIAAALSRK 166

[Close]

BLAST of CmaCh07G013590 vs. TrEMBL
Match: A0A151RUY2_CAJCA (Mitochondria fission 1 protein OS=Cajanus cajan GN=KK1_032069 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.3e-69
Identity = 135/166 (81.33%), Postives = 148/166 (89.16%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60
           M+AK+G LFES+ +FFGGG+QIPWCDRDVIAGCEREVAEA  G SEERKNESIMRLSWAL
Sbjct: 1   MDAKMGSLFESIGNFFGGGEQIPWCDRDVIAGCEREVAEAANGDSEERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120
           VHSRQ EDI RGIAMLE SL N ++PL +REKLYLLAVGYYRS +YARSRQLVEQCLEIA
Sbjct: 61  VHSRQKEDIQRGIAMLETSLGNDKSPLHQREKLYLLAVGYYRSNDYARSRQLVEQCLEIA 120

Query: 121 PDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRR 167
           PDWRQAL+LKK VED+I KDG+IGIGITATAVGLI  GIA A +RR
Sbjct: 121 PDWRQALSLKKIVEDRIAKDGVIGIGITATAVGLIVGGIATALARR 166

[Close]

BLAST of CmaCh07G013590 vs. TrEMBL
Match: A0A0D2Q9C9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G133200 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.3e-69
Identity = 131/166 (78.92%), Postives = 153/166 (92.17%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60
           MEAKIG+  ES+ +FFGGGDQIPWCDRDVIAGCEREVA+A +G+SEE+K+ESIMRLSWAL
Sbjct: 1   MEAKIGQFLESIGTFFGGGDQIPWCDRDVIAGCEREVADAAKGSSEEQKSESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120
           VHSRQ+ED+ RGIAMLEASL N+ +PL +REK+YLLAVGYYR+GE++RSRQLVEQCLEIA
Sbjct: 61  VHSRQAEDVQRGIAMLEASLANSSSPLQQREKIYLLAVGYYRTGEFSRSRQLVEQCLEIA 120

Query: 121 PDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRR 167
           PDWRQAL LKK VE++I KDG+IGIGITATA+GLIA GIAAA +RR
Sbjct: 121 PDWRQALVLKKAVEERIAKDGVIGIGITATALGLIAGGIAAALTRR 166

[Close]

BLAST of CmaCh07G013590 vs. TAIR10
Match: AT3G57090.1 (AT3G57090.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 236.1 bits (601), Expect = 1.6e-62
Identity = 118/169 (69.82%), Postives = 141/169 (83.43%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60
           M+AKIG+ F+SV +FF G D+IPWCD DVIAGCEREV EA +  +E+ K E +MRLSWAL
Sbjct: 1   MDAKIGQFFDSVGTFFSGSDKIPWCDGDVIAGCEREVREATDSGTEDLKKECLMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120
           VHSRQ+ED+ RGIAMLEASL ++  PL+ REKLYLLAVGYYRSG Y+RSRQLV++C+E+ 
Sbjct: 61  VHSRQTEDVQRGIAMLEASLESSAPPLEDREKLYLLAVGYYRSGNYSRSRQLVDRCIEMQ 120

Query: 121 PDWRQALALKKTVEDQIGKDGIIGIGITAT---AVGLIAAGIAAAASRR 167
            DWRQAL LKKT+ED+I KDG+IGIGITAT   AVGLIA GI AA SR+
Sbjct: 121 ADWRQALVLKKTIEDKITKDGVIGIGITATAFGAVGLIAGGIVAAMSRK 169

[Close]

BLAST of CmaCh07G013590 vs. TAIR10
Match: AT5G12390.1 (AT5G12390.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 189.9 bits (481), Expect = 1.3e-48
Identity = 99/170 (58.24%), Postives = 128/170 (75.29%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGG-----DQIPWCDRDVIAGCEREVAEANEGASEERKNESIMR 60
           M+A IGK+F+SV+ FF G      D+ P CD D+I+GCE+E+AEA +   E RK E IMR
Sbjct: 1   MDAAIGKVFDSVSDFFSGAASASADEFPLCDSDIISGCEKELAEAQD---EGRKKECIMR 60

Query: 61  LSWALVHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQ 120
           LSWALVHS+   DI RGIAMLEA ++N  + +  REKLYLLA+GYYRSG+++RSR  +E+
Sbjct: 61  LSWALVHSKMPSDIQRGIAMLEALVVNDTSAMKLREKLYLLALGYYRSGDFSRSRDCIER 120

Query: 121 CLEIAPDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASR 166
           CLE+ P+  QA ALKK +ED+I KDG+IG+GI  TAVG++ AGIAAA  R
Sbjct: 121 CLEVEPESGQAQALKKAIEDRIVKDGVIGVGIAVTAVGVV-AGIAAAILR 166

[Close]

BLAST of CmaCh07G013590 vs. NCBI nr
Match: gi|449449795|ref|XP_004142650.1| (PREDICTED: mitochondrial fission 1 protein A-like [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 1.9e-78
Identity = 154/166 (92.77%), Postives = 158/166 (95.18%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60
           MEAKIGKLFESV SFFGGGDQIPWCDRDVI GCEREVAEA+E ASEERKNESIMRLSWAL
Sbjct: 1   MEAKIGKLFESVCSFFGGGDQIPWCDRDVITGCEREVAEADESASEERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120
           VHSRQSEDINRGIAMLEASL  +RTPL +REKLYLLAVGYYRSGEYARSRQLVEQCLEIA
Sbjct: 61  VHSRQSEDINRGIAMLEASLTISRTPLQQREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120

Query: 121 PDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRR 167
           PDWRQAL LKKTVEDQI KDG+IGIGITATAVGLIAAGIAAAASRR
Sbjct: 121 PDWRQALTLKKTVEDQIAKDGVIGIGITATAVGLIAAGIAAAASRR 166

[Close]

BLAST of CmaCh07G013590 vs. NCBI nr
Match: gi|659111316|ref|XP_008455692.1| (PREDICTED: mitochondrial fission 1 protein A [Cucumis melo])

HSP 1 Score: 300.4 bits (768), Expect = 1.9e-78
Identity = 154/166 (92.77%), Postives = 159/166 (95.78%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60
           MEAKIGKLFESV SFFGGGDQIPWCDRDVIAGCEREVAEA+E ASEERKNESIMRLSWAL
Sbjct: 1   MEAKIGKLFESVCSFFGGGDQIPWCDRDVIAGCEREVAEADESASEERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120
           VHSRQSEDINRGIAMLEASL  +RTPL +REKLYLLAVGYYRSGEYARSRQLVEQCLEIA
Sbjct: 61  VHSRQSEDINRGIAMLEASLTISRTPLQQREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120

Query: 121 PDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRR 167
           PDWRQAL LKKTVED+I KDG+IGIGITATAVGLIAAGIAAAASRR
Sbjct: 121 PDWRQALTLKKTVEDKIAKDGVIGIGITATAVGLIAAGIAAAASRR 166

[Close]

BLAST of CmaCh07G013590 vs. NCBI nr
Match: gi|703078492|ref|XP_010090905.1| (hypothetical protein L484_005229 [Morus notabilis])

HSP 1 Score: 273.5 bits (698), Expect = 2.5e-70
Identity = 134/166 (80.72%), Postives = 150/166 (90.36%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60
           MEAKIGK FESV SFFGGGDQIPWCDRDVI GCEREVA+A  G S+ERKNESIMRLSWAL
Sbjct: 1   MEAKIGKFFESVGSFFGGGDQIPWCDRDVILGCEREVADATNGGSDERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120
           VHSRQ ED+ RG+AMLEASL N+ +PL++REK YLLAVGYYR+ EY++SRQL+EQCLEIA
Sbjct: 61  VHSRQPEDVRRGVAMLEASLTNSSSPLEQREKFYLLAVGYYRTSEYSKSRQLLEQCLEIA 120

Query: 121 PDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRR 167
           PDWRQALALKKTVED+I KDG+IGIGI ATAVGLIA GIAAA +R+
Sbjct: 121 PDWRQALALKKTVEDRIAKDGVIGIGIAATAVGLIAGGIAAALARK 166

[Close]

BLAST of CmaCh07G013590 vs. NCBI nr
Match: gi|590635081|ref|XP_007028543.1| (Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma cacao])

HSP 1 Score: 271.2 bits (692), Expect = 1.2e-69
Identity = 136/166 (81.93%), Postives = 149/166 (89.76%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60
           MEAKIGK FESV SFFGG DQIPWCDRD+I  CEREVA+A +G  EE K+ESIMRLSWAL
Sbjct: 1   MEAKIGKFFESVGSFFGGADQIPWCDRDIIVACEREVADAAKGDLEELKSESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120
           VHSRQ+ED+ RGIAMLEASL N+ +PL  REKLYLLAVGYYR+GEY+RSRQLVEQCLEIA
Sbjct: 61  VHSRQAEDVQRGIAMLEASLANSSSPLQHREKLYLLAVGYYRTGEYSRSRQLVEQCLEIA 120

Query: 121 PDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRR 167
           PDWRQALALKKTVED+I KDG+IGIGITATAVGLIA GIAAA SR+
Sbjct: 121 PDWRQALALKKTVEDRIAKDGVIGIGITATAVGLIAGGIAAALSRK 166

[Close]

BLAST of CmaCh07G013590 vs. NCBI nr
Match: gi|1012335001|gb|KYP46344.1| (Mitochondria fission 1 protein [Cajanus cajan])

HSP 1 Score: 269.2 bits (687), Expect = 4.7e-69
Identity = 135/166 (81.33%), Postives = 148/166 (89.16%), Query Frame = 1


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60
           M+AK+G LFES+ +FFGGG+QIPWCDRDVIAGCEREVAEA  G SEERKNESIMRLSWAL
Sbjct: 1   MDAKMGSLFESIGNFFGGGEQIPWCDRDVIAGCEREVAEAANGDSEERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120
           VHSRQ EDI RGIAMLE SL N ++PL +REKLYLLAVGYYRS +YARSRQLVEQCLEIA
Sbjct: 61  VHSRQKEDIQRGIAMLETSLGNDKSPLHQREKLYLLAVGYYRSNDYARSRQLVEQCLEIA 120

Query: 121 PDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRR 167
           PDWRQAL+LKK VED+I KDG+IGIGITATAVGLI  GIA A +RR
Sbjct: 121 PDWRQALSLKKIVEDRIAKDGVIGIGITATAVGLIVGGIATALARR 166

The following BLAST results are available for this feature:

BLAST of CmaCh07G013590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FIS1A_ARATH	2.8e-61	69.82	Mitochondrial fission 1 protein A OS=Arabidopsis thaliana GN=FIS1A PE=1 SV=1	[more]
FIS1B_ARATH	2.3e-47	58.24	Mitochondrial fission 1 protein B OS=Arabidopsis thaliana GN=FIS1B PE=1 SV=1	[more]
FIS1_YARLI	2.4e-12	37.27	Mitochondria fission 1 protein OS=Yarrowia lipolytica (strain CLIB 122 / E 150) ...	[more]
FIS1_ASHGO	3.8e-10	35.90	Mitochondria fission 1 protein OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.5...	[more]
FIS1_MOUSE	1.9e-09	33.07	Mitochondrial fission 1 protein OS=Mus musculus GN=Fis1 PE=1 SV=1	[more]

BLAST of CmaCh07G013590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY38_CUCSA	1.3e-78	92.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G353620 PE=4 SV=1	[more]
W9QM44_9ROSA	1.7e-70	80.72	Uncharacterized protein OS=Morus notabilis GN=L484_005229 PE=4 SV=1	[more]
A0A061EVC0_THECC	8.6e-70	81.93	Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TC...	[more]
A0A151RUY2_CAJCA	3.3e-69	81.33	Mitochondria fission 1 protein OS=Cajanus cajan GN=KK1_032069 PE=4 SV=1	[more]
A0A0D2Q9C9_GOSRA	4.3e-69	78.92	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G133200 PE=4 SV=1	[more]

BLAST of CmaCh07G013590 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57090.1	1.6e-62	69.82	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G12390.1	1.3e-48	58.24	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CmaCh07G013590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449795\|ref\|XP_004142650.1\|	1.9e-78	92.77	PREDICTED: mitochondrial fission 1 protein A-like [Cucumis sativus]	[more]
gi\|659111316\|ref\|XP_008455692.1\|	1.9e-78	92.77	PREDICTED: mitochondrial fission 1 protein A [Cucumis melo]	[more]
gi\|703078492\|ref\|XP_010090905.1\|	2.5e-70	80.72	hypothetical protein L484_005229 [Morus notabilis]	[more]
gi\|590635081\|ref\|XP_007028543.1\|	1.2e-69	81.93	Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma cacao]	[more]
gi\|1012335001\|gb\|KYP46344.1\|	4.7e-69	81.33	Mitochondria fission 1 protein [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR016543	Fis1
IPR028058	Fis1_TPR_N
IPR028061	Fis1_TPR_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0000266	mitochondrial fission

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000266	mitochondrial fission
biological_process	GO:0016559	peroxisome fission
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G013590.1	CmaCh07G013590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 20..141 score: 9.3
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 10..164 score: 4.22
IPR016543	Mitochondria fission 1 protein	PIR	PIRSF008835	TPR_repeat_11_Fis1	coord: 4..166 score: 4.0
IPR016543	Mitochondria fission 1 protein	PANTHER	PTHR13247	TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11	coord: 1..166 score: 6.3
IPR028058	Fis1, N-terminal tetratricopeptide repeat	PFAM	PF14852	Fis1_TPR_N	coord: 52..79 score: 6.5
IPR028061	Fis1, C-terminal tetratricopeptide repeat	PFAM	PF14853	Fis1_TPR_C	coord: 90..142 score: 7.0
None	No IPR available	PANTHER	PTHR13247:SF3	SUBFAMILY NOT NAMED	coord: 1..166 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh07G013590	Cucsa.018240	Cucumber (Gy14) v1	cgycmaB0739
CmaCh07G013590	Csa4G353620	Cucumber (Chinese Long) v2	cmacuB863
CmaCh07G013590	MELO3C019045	Melon (DHL92) v3.5.1	cmameB807
CmaCh07G013590	CSPI04G17350	Wild cucumber (PI 183967)	cmacpiB880
CmaCh07G013590	CmoCh07G013980	Cucurbita moschata (Rifu)	cmacmoB875
CmaCh07G013590	CmoCh03G001700	Cucurbita moschata (Rifu)	cmacmoB865
CmaCh07G013590	Cp4.1LG19g00170	Cucurbita pepo (Zucchini)	cmacpeB880
CmaCh07G013590	MELO3C019045.2	Melon (DHL92) v3.6.1	cmamedB903
CmaCh07G013590	CsaV3_4G027830	Cucumber (Chinese Long) v3	cmacucB1019
CmaCh07G013590	Bhi03G002000	Wax gourd	cmawgoB1064
CmaCh07G013590	CsGy4G016560	Cucumber (Gy14) v2	cgybcmaB565
CmaCh07G013590	Carg21106	Silver-seed gourd	carcmaB0663

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh07G013590	CmaCh03G001270	Cucurbita maxima (Rimu)	cmacmaB525

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh07G013590	Cucurbita pepo (Zucchini)	cmacpeB863
CmaCh07G013590	Bottle gourd (USVL1VR-Ls)	cmalsiB793
CmaCh07G013590	Cucumber (Gy14) v2	cgybcmaB575
CmaCh07G013590	Cucumber (Chinese Long) v3	cmacucB1027
CmaCh07G013590	Watermelon (97103) v2	cmawmbB891
CmaCh07G013590	Cucurbita maxima (Rimu)	cmacmaB530
CmaCh07G013590	Cucumber (Gy14) v1	cgycmaB0740
CmaCh07G013590	Cucurbita moschata (Rifu)	cmacmoB863
CmaCh07G013590	Cucumber (Chinese Long) v2	cmacuB873
CmaCh07G013590	Melon (DHL92) v3.5.1	cmameB813
CmaCh07G013590	Watermelon (Charleston Gray)	cmawcgB762
CmaCh07G013590	Watermelon (97103) v1	cmawmB838