Carg21106 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21106
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Mitochondrial fission 1 protein
Location	Cucurbita_argyrosperma_scaffold_158 : 282530 .. 285245 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTCTTCTTCGTTAATCATCTGTTTCGTTTCTCTGTCATTAAGATTCGGTGGAGATTTTATTGTATAAATTGGAAATTTTGATTTTTCTGAGATTCACGGAATCATCGGATTTAATGGAAGCAAAAATCGGCAAATTGTTCGAGTCCGTTACTTCGTTCTTCGGCGGTGGCGACCAGATCCCTTGGTGTGATCGCGACGTTATCGCTGTGAGTTTTCTTTTATTCTCTCAGATTCTCGCTTTATCATTACAATTTCTGGTTGGTCTCTGAGAAACTGAAAGAAAGAAATGGAGAAGAACTTGGCTAGGTTAAATGATGTCTTACCTCAAATTTGGCGGATTGGGTGAAGCATAAGCATTCGATTCTCACATTTGTCGATTAATTTTGGCGTGCTTAGATGCATCACTGGAAAAGGATATGCGGTAGAAGTAATTAAACCCTGTAAAAGAAGAGATTGAATGTCTCCATACAAAAATTGGTGTATAATCGATCCAGGTTTATGGGGTGGAAGTAATTTGAAACCATGGTGAGATTGCAAATTGCAACATTGTATTTGATTTAGATTGCATACTGTAATGCAGGGGTGTGAAAGAGAAGTTGCAGAGGCCAATGAAGGCGCCTCTGAAGAACGCAAGAATGAAAGCATCTTGAGGCTATCATGGGCACTTGTTCATTCAAGGCAATCGGAGGATATTAATCGTGGCATTGCAATGCTTGAAGGTAAATCTTCTGCAAAGAATTTCTATGGGTTTTTTAGAAACAGTATTGAACTCTGTCTCCCATATTCGTTTTGTTGTCAACTTCTTGGTTAAAAGCTCATCTCTTCCCTTGAGCATACTGATTCAATCCTAAGACCATCTAAACAATTCCCTTCATTTATGACCAATATCCATAACAACTTCCCTAACTAATTACTAGTATATCCCCTAATACCATTCACAATCTTGTCATTGATGACTGTGACATTTATGAGTGACGTTTTGTAGGCTATTAACAAAGAAGATGGGTGTTTAATTCTTGCTGCTATCTGCTATGACCTGAAAGGCCAGTTTGTGTTCTCGATTATATGATTTGCTTCTGTCATCCAGAAAAATAGTTTCGTTTTTTATTATTCCAAATATAGTTTGACTTCCAAATTTGTGTCATCGAAAATATTTTCATATGCGGTTTGTGTGAACTTGGAAACGAGAACTCAAACTTCATGATCAACTTGCCTTGGAATTCTACTAGAAATGAGCTTTGACCTTAAAATGGGAGAAGCTACTTCCAGTTGAAACCTTTCTTCTCGCTTGATATATATATTCACATTCTCAAACTTCAGTTTGTAGTTATTTAAGATTAACAATTTTGCTCAAAACTTATTATTTTCATGGTTCAGTTTTTATAGTTGGATTAGCGTGTCATTTTGCAGCTTCCTTAATCAATGCTAGAACCCCTTTGGACCGGAGGGAGAAACTTTATTTGCTGGCTGTTGGATATTACAGAAGTGGTGAATATGCAAGGAGTCGGCAGCTTGTAGAACAATGTTTAGAGGTTTGTTCTTTCTTAGGCATGCAACTTGGTATTCTGCCAGCTATAAATTCATTGGTGACATCACACATAATTGCACAATGTCTTGCTTCAATTCCTATTTAATTTAAATGCTTCAGCTTGTAATTTTGTTTGTTAGATCATGCATTTCCTTTCTGAACCGTACTTACAAGTTACATGTTGACGAAACCTTAAACTATATCATCGTAAGAAGTATAGATACGGACACGAAAAGACACGTTAATGTCTCAAAAAAAACTAGGACACTGACACGTTGGTTGCGAGTGGTCAACAATGTTTCTTGTTAGGGGTTCTATATTTCATAACTTCCTGTCCTGTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTCTAAATTTAAATGATTTAGGCTTTTTGTTTCAAAATGTATCCAAGTCGTGTCTAGCTATCTCCAAAATTAAAAAAAAAAATGTAAAATAGTGTCGTGTCCAAAGGTGTCCAGATGTATGTTTATCCGACACGTGTCTGAAGCGTTTTCAGATGTATCCGTATCCAACACATGTCAAAGCGTGTATGCTTATTCGACACGTGTCTTGTGTCCGAATTTAACCGTATCCGATAAGAATCTGACACAAACACTCGACCTGAACTTAAGTGTCCGTGCCTCACAGATATCATCTATGATCCTATTAGTAAAAAGATCATTCCAAAACATATGGTGCACGACTCATCATACTTTTTAATCAATCAAAGGCATATTTTGATGAATGAAAGAATGACCCTTGGCACTGATTGACTTTGTTATAACTGAATTCCTTGGGTTTTTGTAGATTGCACCTGATTGGAGGCAAGCTTTAACACTTAAAAAGACTGTAGAAGACCAAATTGGAAAAGGTATAATGAAACATAAAATACCTTTTCTTGAATCTTTTTTACTGTATCGAATCATAAGCTGAAAGAATTTGGTTCATGTTATGTCAATTTGCAGATGGAATCATCGGTATTGGCATTACAGCTACAGCTGTGGGACTTATAGCTGCTGGGATCGCAGCGGCAGTTAGTCGAAGAGGTTGAAATCTAACACACACACACCAAAATATGCACACAATTTAAGTGTTTCCCTCAAGAATGGTTGTCTAATATTATCAGTTTCGCCTCAAGAATGGTTGTCTACTAGGTGACTCCTGTATCTTTTTTTTTTTTTTT

mRNA sequence

AATTTCTTCTTCGTTAATCATCTGTTTCGTTTCTCTGTCATTAAGATTCGGTGGAGATTTTATTGTATAAATTGGAAATTTTGATTTTTCTGAGATTCACGGAATCATCGGATTTAATGGAAGCAAAAATCGGCAAATTGTTCGAGTCCGTTACTTCGTTCTTCGGCGGTGGCGACCAGATCCCTTGGTGTGATCGCGACGTTATCGCTGGGTGTGAAAGAGAAGTTGCAGAGGCCAATGAAGGCGCCTCTGAAGAACGCAAGAATGAAAGCATCTTGAGGCTATCATGGGCACTTGTTCATTCAAGGCAATCGGAGGATATTAATCGTGGCATTGCAATGCTTGAAGTTGGATTAGCGTGTCATTTTGCAGCTTCCTTAATCAATGCTAGAACCCCTTTGGACCGGAGGGAGAAACTTTATTTGCTGGCTGTTGGATATTACAGAAGTGGTGAATATGCAAGGAGTCGGCAGCTTGTAGAACAATGTTTAGAGATTGCACCTGATTGGAGGCAAGCTTTAACACTTAAAAAGACTGTAGAAGACCAAATTGGAAAAGATGGAATCATCGGTATTGGCATTACAGCTACAGCTGTGGGACTTATAGCTGCTGGGATCGCAGCGGCAGTTAGTCGAAGAGGTTGAAATCTAACACACACACACCAAAATATGCACACAATTTAAGTGTTTCCCTCAAGAATGGTTGTCTAATATTATCAGTTTCGCCTCAAGAATGGTTGTCTACTAGGTGACTCCTGTATCTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGAAGCAAAAATCGGCAAATTGTTCGAGTCCGTTACTTCGTTCTTCGGCGGTGGCGACCAGATCCCTTGGTGTGATCGCGACGTTATCGCTGGGTGTGAAAGAGAAGTTGCAGAGGCCAATGAAGGCGCCTCTGAAGAACGCAAGAATGAAAGCATCTTGAGGCTATCATGGGCACTTGTTCATTCAAGGCAATCGGAGGATATTAATCGTGGCATTGCAATGCTTGAAGTTGGATTAGCGTGTCATTTTGCAGCTTCCTTAATCAATGCTAGAACCCCTTTGGACCGGAGGGAGAAACTTTATTTGCTGGCTGTTGGATATTACAGAAGTGGTGAATATGCAAGGAGTCGGCAGCTTGTAGAACAATGTTTAGAGATTGCACCTGATTGGAGGCAAGCTTTAACACTTAAAAAGACTGTAGAAGACCAAATTGGAAAAGATGGAATCATCGGTATTGGCATTACAGCTACAGCTGTGGGACTTATAGCTGCTGGGATCGCAGCGGCAGTTAGTCGAAGAGGTTGA

Protein sequence

MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESILRLSWALVHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRRG

Homology

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BLAST of Carg21106 vs. NCBI nr
Match: XP_023517188.1 (mitochondrial fission 1 protein A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.3 bits (817), Expect = 8.1e-84
Identity = 166/175 (94.86%), Postives = 167/175 (95.43%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESILRLSWAL 60
           MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESI+RLSWAL
Sbjct: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120
           VHSRQSEDINRGIAMLE        ASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL
Sbjct: 61  VHSRQSEDINRGIAMLE--------ASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120

Query: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRRG 176
           VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRRG
Sbjct: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRRG 167

[Close]

BLAST of Carg21106 vs. NCBI nr
Match: XP_022925172.1 (mitochondrial fission 1 protein A [Cucurbita moschata])

HSP 1 Score: 318.9 bits (816), Expect = 1.1e-83
Identity = 165/175 (94.29%), Postives = 167/175 (95.43%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESILRLSWAL 60
           MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESI+RLSWAL
Sbjct: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120
           VHSRQSEDINRGIAMLE        ASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL
Sbjct: 61  VHSRQSEDINRGIAMLE--------ASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120

Query: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRRG 176
           VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGL+AAGIAAAVSRRG
Sbjct: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLVAAGIAAAVSRRG 167

[Close]

BLAST of Carg21106 vs. NCBI nr
Match: XP_022966468.1 (mitochondrial fission 1 protein A [Cucurbita maxima])

HSP 1 Score: 315.8 bits (808), Expect = 8.9e-83
Identity = 164/175 (93.71%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESILRLSWAL 60
           MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESI+RLSWAL
Sbjct: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120
           VHSRQSEDINRGIAMLE        ASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL
Sbjct: 61  VHSRQSEDINRGIAMLE--------ASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120

Query: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRRG 176
           VEQCLEIAPDWRQAL LKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAA SRRG
Sbjct: 121 VEQCLEIAPDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRRG 167

[Close]

BLAST of Carg21106 vs. NCBI nr
Match: XP_004142650.1 (PREDICTED: mitochondrial fission 1 protein A-like [Cucumis sativus] >KGN54520.1 hypothetical protein Csa_4G353620 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 2.1e-76
Identity = 153/174 (87.93%), Postives = 158/174 (90.80%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESILRLSWAL 60
           MEAKIGKLFESV SFFGGGDQIPWCDRDVI GCEREVAEA+E ASEERKNESI+RLSWAL
Sbjct: 1   MEAKIGKLFESVCSFFGGGDQIPWCDRDVITGCEREVAEADESASEERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120
           VHSRQSEDINRGIAMLE        ASL  +RTPL +REKLYLLAVGYYRSGEYARSRQL
Sbjct: 61  VHSRQSEDINRGIAMLE--------ASLTISRTPLQQREKLYLLAVGYYRSGEYARSRQL 120

Query: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRR 175
           VEQCLEIAPDWRQALTLKKTVEDQI KDG+IGIGITATAVGLIAAGIAAA SRR
Sbjct: 121 VEQCLEIAPDWRQALTLKKTVEDQIAKDGVIGIGITATAVGLIAAGIAAAASRR 166

[Close]

BLAST of Carg21106 vs. NCBI nr
Match: XP_008455692.1 (PREDICTED: mitochondrial fission 1 protein A [Cucumis melo])

HSP 1 Score: 294.7 bits (753), Expect = 2.1e-76
Identity = 153/174 (87.93%), Postives = 159/174 (91.38%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESILRLSWAL 60
           MEAKIGKLFESV SFFGGGDQIPWCDRDVIAGCEREVAEA+E ASEERKNESI+RLSWAL
Sbjct: 1   MEAKIGKLFESVCSFFGGGDQIPWCDRDVIAGCEREVAEADESASEERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120
           VHSRQSEDINRGIAMLE        ASL  +RTPL +REKLYLLAVGYYRSGEYARSRQL
Sbjct: 61  VHSRQSEDINRGIAMLE--------ASLTISRTPLQQREKLYLLAVGYYRSGEYARSRQL 120

Query: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRR 175
           VEQCLEIAPDWRQALTLKKTVED+I KDG+IGIGITATAVGLIAAGIAAA SRR
Sbjct: 121 VEQCLEIAPDWRQALTLKKTVEDKIAKDGVIGIGITATAVGLIAAGIAAAASRR 166

[Close]

BLAST of Carg21106 vs. TAIR10
Match: AT3G57090.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 230.7 bits (587), Expect = 6.8e-61
Identity = 117/177 (66.10%), Postives = 142/177 (80.23%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESILRLSWAL 60
           M+AKIG+ F+SV +FF G D+IPWCD DVIAGCEREV EA +  +E+ K E ++RLSWAL
Sbjct: 1   MDAKIGQFFDSVGTFFSGSDKIPWCDGDVIAGCEREVREATDSGTEDLKKECLMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120
           VHSRQ+ED+ RGIAMLE        ASL ++  PL+ REKLYLLAVGYYRSG Y+RSRQL
Sbjct: 61  VHSRQTEDVQRGIAMLE--------ASLESSAPPLEDREKLYLLAVGYYRSGNYSRSRQL 120

Query: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITAT---AVGLIAAGIAAAVSRR 175
           V++C+E+  DWRQAL LKKT+ED+I KDG+IGIGITAT   AVGLIA GI AA+SR+
Sbjct: 121 VDRCIEMQADWRQALVLKKTIEDKITKDGVIGIGITATAFGAVGLIAGGIVAAMSRK 169

[Close]

BLAST of Carg21106 vs. TAIR10
Match: AT5G12390.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 183.3 bits (464), Expect = 1.3e-46
Identity = 97/178 (54.49%), Postives = 128/178 (71.91%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGG-----GDQIPWCDRDVIAGCEREVAEANEGASEERKNESILR 60
           M+A IGK+F+SV+ FF G      D+ P CD D+I+GCE+E+AEA +   E RK E I+R
Sbjct: 1   MDAAIGKVFDSVSDFFSGAASASADEFPLCDSDIISGCEKELAEAQD---EGRKKECIMR 60

Query: 61  LSWALVHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYA 120
           LSWALVHS+   DI RGIAMLE        A ++N  + +  REKLYLLA+GYYRSG+++
Sbjct: 61  LSWALVHSKMPSDIQRGIAMLE--------ALVVNDTSAMKLREKLYLLALGYYRSGDFS 120

Query: 121 RSRQLVEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSR 174
           RSR  +E+CLE+ P+  QA  LKK +ED+I KDG+IG+GI  TAVG++ AGIAAA+ R
Sbjct: 121 RSRDCIERCLEVEPESGQAQALKKAIEDRIVKDGVIGVGIAVTAVGVV-AGIAAAILR 166

[Close]

BLAST of Carg21106 vs. Swiss-Prot
Match: sp|Q9M1J1|FIS1A_ARATH (Mitochondrial fission 1 protein A OS=Arabidopsis thaliana OX=3702 GN=FIS1A PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-59
Identity = 117/177 (66.10%), Postives = 142/177 (80.23%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESILRLSWAL 60
           M+AKIG+ F+SV +FF G D+IPWCD DVIAGCEREV EA +  +E+ K E ++RLSWAL
Sbjct: 1   MDAKIGQFFDSVGTFFSGSDKIPWCDGDVIAGCEREVREATDSGTEDLKKECLMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120
           VHSRQ+ED+ RGIAMLE        ASL ++  PL+ REKLYLLAVGYYRSG Y+RSRQL
Sbjct: 61  VHSRQTEDVQRGIAMLE--------ASLESSAPPLEDREKLYLLAVGYYRSGNYSRSRQL 120

Query: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITAT---AVGLIAAGIAAAVSRR 175
           V++C+E+  DWRQAL LKKT+ED+I KDG+IGIGITAT   AVGLIA GI AA+SR+
Sbjct: 121 VDRCIEMQADWRQALVLKKTIEDKITKDGVIGIGITATAFGAVGLIAGGIVAAMSRK 169

[Close]

BLAST of Carg21106 vs. Swiss-Prot
Match: sp|Q94CK3|FIS1B_ARATH (Mitochondrial fission 1 protein B OS=Arabidopsis thaliana OX=3702 GN=FIS1B PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.3e-45
Identity = 97/178 (54.49%), Postives = 128/178 (71.91%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGG-----GDQIPWCDRDVIAGCEREVAEANEGASEERKNESILR 60
           M+A IGK+F+SV+ FF G      D+ P CD D+I+GCE+E+AEA +   E RK E I+R
Sbjct: 1   MDAAIGKVFDSVSDFFSGAASASADEFPLCDSDIISGCEKELAEAQD---EGRKKECIMR 60

Query: 61  LSWALVHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYA 120
           LSWALVHS+   DI RGIAMLE        A ++N  + +  REKLYLLA+GYYRSG+++
Sbjct: 61  LSWALVHSKMPSDIQRGIAMLE--------ALVVNDTSAMKLREKLYLLALGYYRSGDFS 120

Query: 121 RSRQLVEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSR 174
           RSR  +E+CLE+ P+  QA  LKK +ED+I KDG+IG+GI  TAVG++ AGIAAA+ R
Sbjct: 121 RSRDCIERCLEVEPESGQAQALKKAIEDRIVKDGVIGVGIAVTAVGVV-AGIAAAILR 166

[Close]

BLAST of Carg21106 vs. Swiss-Prot
Match: sp|Q6CFJ0|FIS1_YARLI (Mitochondrial fission 1 protein OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=FIS1 PE=3 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 3.3e-12
Identity = 41/118 (34.75%), Postives = 68/118 (57.63%), Query Frame = 0


Query: 57  SWALVHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYAR 116
           +W L+ SR+ ED   G+ +L          + +   TP  RRE LY LA+G Y+ GEY  
Sbjct: 45  AWGLIKSRKVEDQQLGVQIL----------AQVYKDTPSRRRECLYYLAIGSYKLGEYTD 104

Query: 117 SRQLVEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRR 175
           +R+  +  L+I PD  Q+  L++ +ED++ K+G+IGI I    + + AA + A +S++
Sbjct: 105 ARKYCDLLLQIEPDDPQSAKLRQIIEDKLAKEGMIGIAIVGGVIAVGAAVLGAVLSQK 152

[Close]

BLAST of Carg21106 vs. Swiss-Prot
Match: sp|Q75AI5|FIS1_ASHGO (Mitochondrial fission 1 protein OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=FIS1 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.9e-10
Identity = 42/125 (33.60%), Postives = 63/125 (50.40%), Query Frame = 0


Query: 51  ESILRLSWALVHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYR 110
           +S    +W LV S  +ED   G+ +L          + I   +P+ RRE LY LA+G Y+
Sbjct: 40  QSRFNYAWGLVKSHDAEDQRLGVKLL----------TDIYKESPMRRRESLYYLAIGCYK 99

Query: 111 SGEYARSRQLVEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAA 170
            GEYA +++  +  +   PD  QA TLK  VE +I  +G+ G         L+ AG+AA 
Sbjct: 100 LGEYAMAKRYADALVAHEPDNAQARTLKAMVEQKIQTEGLKG-------AALVGAGLAAV 147

Query: 171 VSRRG 176
            +  G
Sbjct: 160 AAAAG 147

[Close]

BLAST of Carg21106 vs. Swiss-Prot
Match: sp|Q6CU37|FIS1_KLULA (Mitochondrial fission 1 protein OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=FIS1 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.4e-09
Identity = 44/133 (33.08%), Postives = 67/133 (50.38%), Query Frame = 0


Query: 41  NEGASEERKNESILRLSWALVHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREK 100
           NEG  E    +S    +W LV S   ED   G+ +L          + I   +P+ RRE 
Sbjct: 31  NEG-GEISSIQSRFNYAWGLVRSTNKEDQMLGVKLL----------TDIYKESPMRRREC 90

Query: 101 LYLLAVGYYRSGEYARSRQLVEQCLEIAPDWRQALTLKKTVEDQIGKDGI-------IGI 160
           LY L +G Y+ GEY+ +++ V+  +   P+ +QAL L+  VE++I   G+        GI
Sbjct: 91  LYYLTIGCYKLGEYSTAKRYVDALVHHEPENKQALMLQTAVENKITSQGLKGIALISAGI 150

Query: 161 GITATAVGLIAAG 167
            I AT +GL+  G
Sbjct: 151 AIGATTIGLLIRG 152

[Close]

BLAST of Carg21106 vs. TrEMBL
Match: tr|A0A1S3C1F4|A0A1S3C1F4_CUCME (Mitochondrial fission 1 protein OS=Cucumis melo OX=3656 GN=LOC103495805 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.4e-76
Identity = 153/174 (87.93%), Postives = 159/174 (91.38%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESILRLSWAL 60
           MEAKIGKLFESV SFFGGGDQIPWCDRDVIAGCEREVAEA+E ASEERKNESI+RLSWAL
Sbjct: 1   MEAKIGKLFESVCSFFGGGDQIPWCDRDVIAGCEREVAEADESASEERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120
           VHSRQSEDINRGIAMLE        ASL  +RTPL +REKLYLLAVGYYRSGEYARSRQL
Sbjct: 61  VHSRQSEDINRGIAMLE--------ASLTISRTPLQQREKLYLLAVGYYRSGEYARSRQL 120

Query: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRR 175
           VEQCLEIAPDWRQALTLKKTVED+I KDG+IGIGITATAVGLIAAGIAAA SRR
Sbjct: 121 VEQCLEIAPDWRQALTLKKTVEDKIAKDGVIGIGITATAVGLIAAGIAAAASRR 166

[Close]

BLAST of Carg21106 vs. TrEMBL
Match: tr|A0A0A0KY38|A0A0A0KY38_CUCSA (Mitochondrial fission 1 protein OS=Cucumis sativus OX=3659 GN=Csa_4G353620 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.4e-76
Identity = 153/174 (87.93%), Postives = 158/174 (90.80%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESILRLSWAL 60
           MEAKIGKLFESV SFFGGGDQIPWCDRDVI GCEREVAEA+E ASEERKNESI+RLSWAL
Sbjct: 1   MEAKIGKLFESVCSFFGGGDQIPWCDRDVITGCEREVAEADESASEERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120
           VHSRQSEDINRGIAMLE        ASL  +RTPL +REKLYLLAVGYYRSGEYARSRQL
Sbjct: 61  VHSRQSEDINRGIAMLE--------ASLTISRTPLQQREKLYLLAVGYYRSGEYARSRQL 120

Query: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRR 175
           VEQCLEIAPDWRQALTLKKTVEDQI KDG+IGIGITATAVGLIAAGIAAA SRR
Sbjct: 121 VEQCLEIAPDWRQALTLKKTVEDQIAKDGVIGIGITATAVGLIAAGIAAAASRR 166

[Close]

BLAST of Carg21106 vs. TrEMBL
Match: tr|A0A2P5ECC9|A0A2P5ECC9_9ROSA (Mitochondrial fission 1 protein OS=Trema orientalis OX=63057 GN=TorRG33x02_210350 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 4.4e-70
Identity = 135/174 (77.59%), Postives = 154/174 (88.51%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESILRLSWAL 60
           MEAKIGK FESV SFFGGGDQIPWCDRD+I GCEREVAEA +G SEERKNESI+RLSWAL
Sbjct: 1   MEAKIGKFFESVGSFFGGGDQIPWCDRDIILGCEREVAEAADGGSEERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120
           VHSRQ ED+ RG+AMLE        ASL N+ +PL++REKLY+LAVGYYRS EY+RSRQ+
Sbjct: 61  VHSRQPEDVKRGVAMLE--------ASLTNSNSPLEQREKLYILAVGYYRSSEYSRSRQV 120

Query: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRR 175
           +EQCLEIAPDWRQALTLKKTVE++I KDG+IGIGITATAVGLIA GIAAA++R+
Sbjct: 121 LEQCLEIAPDWRQALTLKKTVEERIAKDGVIGIGITATAVGLIAGGIAAALARK 166

[Close]

BLAST of Carg21106 vs. TrEMBL
Match: tr|A0A2P5BU26|A0A2P5BU26_PARAD (Mitochondrial fission 1 protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_210180 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.3e-69
Identity = 134/174 (77.01%), Postives = 154/174 (88.51%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESILRLSWAL 60
           MEAKIGK FESV SFFGGGDQIPWCDRD+I GCEREVAEA +G S+ERKNESI+RLSWAL
Sbjct: 1   MEAKIGKFFESVGSFFGGGDQIPWCDRDIILGCEREVAEAADGGSKERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120
           VHSRQ ED+ RG+AMLE        ASL N+ +PL++REKLYLLA+GYYRS EY+RSRQ+
Sbjct: 61  VHSRQPEDVKRGVAMLE--------ASLTNSSSPLEQREKLYLLAIGYYRSSEYSRSRQV 120

Query: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRR 175
           +EQCLEIAPDWRQALTLKKTVE++I KDG+IGIGITATAVGLIA GIAAA++R+
Sbjct: 121 LEQCLEIAPDWRQALTLKKTVEERIAKDGVIGIGITATAVGLIAGGIAAALARK 166

[Close]

BLAST of Carg21106 vs. TrEMBL
Match: tr|W9QM44|W9QM44_9ROSA (Mitochondrial fission 1 protein OS=Morus notabilis OX=981085 GN=L484_005229 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 4.1e-68
Identity = 132/174 (75.86%), Postives = 150/174 (86.21%), Query Frame = 0


Query: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESILRLSWAL 60
           MEAKIGK FESV SFFGGGDQIPWCDRDVI GCEREVA+A  G S+ERKNESI+RLSWAL
Sbjct: 1   MEAKIGKFFESVGSFFGGGDQIPWCDRDVILGCEREVADATNGGSDERKNESIMRLSWAL 60

Query: 61  VHSRQSEDINRGIAMLEVGLACHFAASLINARTPLDRREKLYLLAVGYYRSGEYARSRQL 120
           VHSRQ ED+ RG+AMLE        ASL N+ +PL++REK YLLAVGYYR+ EY++SRQL
Sbjct: 61  VHSRQPEDVRRGVAMLE--------ASLTNSSSPLEQREKFYLLAVGYYRTSEYSKSRQL 120

Query: 121 VEQCLEIAPDWRQALTLKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAVSRR 175
           +EQCLEIAPDWRQAL LKKTVED+I KDG+IGIGI ATAVGLIA GIAAA++R+
Sbjct: 121 LEQCLEIAPDWRQALALKKTVEDRIAKDGVIGIGIAATAVGLIAGGIAAALARK 166

The following BLAST results are available for this feature:

BLAST of Carg21106 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023517188.1	8.1e-84	94.86	mitochondrial fission 1 protein A [Cucurbita pepo subsp. pepo]	[more]
XP_022925172.1	1.1e-83	94.29	mitochondrial fission 1 protein A [Cucurbita moschata]	[more]
XP_022966468.1	8.9e-83	93.71	mitochondrial fission 1 protein A [Cucurbita maxima]	[more]
XP_004142650.1	2.1e-76	87.93	PREDICTED: mitochondrial fission 1 protein A-like [Cucumis sativus] >KGN54520.1 ...	[more]
XP_008455692.1	2.1e-76	87.93	PREDICTED: mitochondrial fission 1 protein A [Cucumis melo]	[more]

BLAST of Carg21106 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57090.1	6.8e-61	66.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G12390.1	1.3e-46	54.49	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Carg21106 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M1J1\|FIS1A_ARATH	1.2e-59	66.10	Mitochondrial fission 1 protein A OS=Arabidopsis thaliana OX=3702 GN=FIS1A PE=1 ...	[more]
sp\|Q94CK3\|FIS1B_ARATH	2.3e-45	54.49	Mitochondrial fission 1 protein B OS=Arabidopsis thaliana OX=3702 GN=FIS1B PE=1 ...	[more]
sp\|Q6CFJ0\|FIS1_YARLI	3.3e-12	34.75	Mitochondrial fission 1 protein OS=Yarrowia lipolytica (strain CLIB 122 / E 150)...	[more]
sp\|Q75AI5\|FIS1_ASHGO	6.9e-10	33.60	Mitochondrial fission 1 protein OS=Ashbya gossypii (strain ATCC 10895 / CBS 109....	[more]
sp\|Q6CU37\|FIS1_KLULA	3.4e-09	33.08	Mitochondrial fission 1 protein OS=Kluyveromyces lactis (strain ATCC 8585 / CBS ...	[more]

BLAST of Carg21106 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C1F4\|A0A1S3C1F4_CUCME	1.4e-76	87.93	Mitochondrial fission 1 protein OS=Cucumis melo OX=3656 GN=LOC103495805 PE=3 SV=...	[more]
tr\|A0A0A0KY38\|A0A0A0KY38_CUCSA	1.4e-76	87.93	Mitochondrial fission 1 protein OS=Cucumis sativus OX=3659 GN=Csa_4G353620 PE=3 ...	[more]
tr\|A0A2P5ECC9\|A0A2P5ECC9_9ROSA	4.4e-70	77.59	Mitochondrial fission 1 protein OS=Trema orientalis OX=63057 GN=TorRG33x02_21035...	[more]
tr\|A0A2P5BU26\|A0A2P5BU26_PARAD	1.3e-69	77.01	Mitochondrial fission 1 protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_2...	[more]
tr\|W9QM44\|W9QM44_9ROSA	4.1e-68	75.86	Mitochondrial fission 1 protein OS=Morus notabilis OX=981085 GN=L484_005229 PE=3...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0000266	mitochondrial fission

Vocabulary: **INTERPRO**
Term	Definition
IPR033745	Fis1_cytosol
IPR011990	TPR-like_helical_dom_sf
IPR028058	Fis1_TPR_N
IPR028061	Fis1_TPR_C
IPR016543	Fis1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000266	mitochondrial fission
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21106-RA	Carg21106-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016543	Mitochondria fission 1 protein	PIRSF	PIRSF008835	TPR_repeat_11_Fis1	coord: 4..174 e-value: 5.6E-41 score: 137.7
IPR016543	Mitochondria fission 1 protein	PANTHER	PTHR13247	TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11	coord: 1..174
IPR028061	Fis1, C-terminal tetratricopeptide repeat	PFAM	PF14853	Fis1_TPR_C	coord: 98..150 e-value: 7.0E-22 score: 77.1
IPR028058	Fis1, N-terminal tetratricopeptide repeat	PFAM	PF14852	Fis1_TPR_N	coord: 55..78 e-value: 1.9E-8 score: 33.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 26..174 e-value: 4.3E-35 score: 122.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 10..172
None	No IPR available	PANTHER	PTHR13247:SF9	SUBFAMILY NOT NAMED	coord: 1..174
IPR033745	Mitochondria fission protein Fis1, cytosolic domain	CDD	cd12212	Fis1	coord: 23..144 e-value: 4.73723E-32 score: 111.876

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21106	Csa4G353620	Cucumber (Chinese Long) v2	carcuB0507
Carg21106	MELO3C019045	Melon (DHL92) v3.5.1	carmeB0482
Carg21106	CSPI04G17350	Wild cucumber (PI 183967)	carcpiB0514
Carg21106	Cucsa.018240	Cucumber (Gy14) v1	carcgyB0547
Carg21106	CmaCh07G013590	Cucurbita maxima (Rimu)	carcmaB0663
Carg21106	CmoCh03G001700	Cucurbita moschata (Rifu)	carcmoB0644
Carg21106	CmoCh07G013980	Cucurbita moschata (Rifu)	carcmoB0646
Carg21106	Cp4.1LG19g00170	Cucurbita pepo (Zucchini)	carcpeB0668
Carg21106	CsGy4G016560	Cucumber (Gy14) v2	carcgybB0484
Carg21106	MELO3C019045.2	Melon (DHL92) v3.6.1	carmedB0485
Carg21106	CsaV3_4G027830	Cucumber (Chinese Long) v3	carcucB0512
Carg21106	Bhi03G002000	Wax gourd	carwgoB0578

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21106	Cucumber (Gy14) v2	carcgybB0483
Carg21106	Cucumber (Gy14) v1	carcgyB0548
Carg21106	Cucurbita maxima (Rimu)	carcmaB0661
Carg21106	Cucurbita moschata (Rifu)	carcmoB0643
Carg21106	Cucurbita pepo (Zucchini)	carcpeB0665
Carg21106	Cucumber (Chinese Long) v2	carcuB0506
Carg21106	Cucumber (Chinese Long) v3	carcucB0511
Carg21106	Bottle gourd (USVL1VR-Ls)	carlsiB428
Carg21106	Melon (DHL92) v3.5.1	carmeB0479
Carg21106	Watermelon (Charleston Gray)	carwcgB0460
Carg21106	Watermelon (97103) v1	carwmB0470
Carg21106	Watermelon (97103) v2	carwmbB0499