CmaCh07G013490 (gene) Cucurbita maxima (Rimu)

NameCmaCh07G013490
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDehydration-induced protein ERD15
LocationCma_Chr07 : 7684704 .. 7685021 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTAGCATCCGAAGAAAGATCAAAGCTAAACCCGAACGCTCCGCTTTTCATCCCGGCCGCCTACCAGGTGGAGGATTTCTCTCCACAATGGTGGCAACTGGTCACAACCTCGACATGGTACCACGACTACTGGCTGAGCCAACACCAAGAAGAGAGCGACTTCTCTTTGAATAGCGAAGACGATTATGACATTGCTGAATTTCTGCCACTGGCCTTAGATCTTGAAGGCAACGAAGAGCTCCGCACCATGGAAGCTGAATTCGAGGAGTTTATTCAAGCTTCTCTCAATGAAGGGACCCAAGAACTTCCTTAA

mRNA sequence

ATGTCTCTAGCATCCGAAGAAAGATCAAAGCTAAACCCGAACGCTCCGCTTTTCATCCCGGCCGCCTACCAGGTGGAGGATTTCTCTCCACAATGGTGGCAACTGGTCACAACCTCGACATGGTACCACGACTACTGGCTGAGCCAACACCAAGAAGAGAGCGACTTCTCTTTGAATAGCGAAGACGATTATGACATTGCTGAATTTCTGCCACTGGCCTTAGATCTTGAAGGCAACGAAGAGCTCCGCACCATGGAAGCTGAATTCGAGGAGTTTATTCAAGCTTCTCTCAATGAAGGGACCCAAGAACTTCCTTAA

Coding sequence (CDS)

ATGTCTCTAGCATCCGAAGAAAGATCAAAGCTAAACCCGAACGCTCCGCTTTTCATCCCGGCCGCCTACCAGGTGGAGGATTTCTCTCCACAATGGTGGCAACTGGTCACAACCTCGACATGGTACCACGACTACTGGCTGAGCCAACACCAAGAAGAGAGCGACTTCTCTTTGAATAGCGAAGACGATTATGACATTGCTGAATTTCTGCCACTGGCCTTAGATCTTGAAGGCAACGAAGAGCTCCGCACCATGGAAGCTGAATTCGAGGAGTTTATTCAAGCTTCTCTCAATGAAGGGACCCAAGAACTTCCTTAA

Protein sequence

MSLASEERSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLNSEDDYDIAEFLPLALDLEGNEELRTMEAEFEEFIQASLNEGTQELP
BLAST of CmaCh07G013490 vs. Swiss-Prot
Match: ERD15_ARATH (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana GN=ERD15 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.1e-19
Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 1

Query: 1  MSLASEERSKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYHDYWLSQHQEESD-FSL 60
          M++ S  RS LNP+APLFIPAA  QVEDFSP+WWQLVTTSTWY DYW+SQ Q+ +D F  
Sbjct: 1  MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60

Query: 61 NSEDD-----YDIAEFLPLALDLEGNEE-LRTMEAEFEE 92
          N E++      D+A+ LP + D +  E+   T  AEF++
Sbjct: 61 NGENENGGGHIDVADLLPESFDFDDMEDFFDTDAAEFDQ 99

BLAST of CmaCh07G013490 vs. Swiss-Prot
Match: CID2_ARATH (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana GN=CID2 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.7e-12
Identity = 40/89 (44.94%), Postives = 50/89 (56.18%), Query Frame = 1

Query: 9  SKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLNSEDDYDIA 68
          S LNPNAP+F P  + +VEDFSP+WW LVTTS W+ D+WLS + E               
Sbjct: 10 STLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSEN-------------- 69

Query: 69 EFLPLALDLEGNEELRTMEAEFEEFIQAS 97
          EFL       G ++   ME EFEE I +S
Sbjct: 70 EFL-------GGDDFSVMEEEFEEMIASS 77

BLAST of CmaCh07G013490 vs. TrEMBL
Match: Q6ELF8_CUCSA (Poly(A)-binding protein C-terminal interacting protein 243 OS=Cucumis sativus GN=Csa_4G214830 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.2e-38
Identity = 87/105 (82.86%), Postives = 92/105 (87.62%), Query Frame = 1

Query: 1   MSLASEE-RSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLN 60
           M+LAS E  SKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWY DYWLSQHQEESDF ++
Sbjct: 1   MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID 60

Query: 61  --SEDDY--DIAEFLPLALDLEGNEELRTMEAEFEEFIQASLNEG 101
              EDD+  DIAEFLP A DL+ NEELRTMEAEFEEFIQASLNEG
Sbjct: 61  GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEG 105

BLAST of CmaCh07G013490 vs. TrEMBL
Match: W9S851_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015513 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 8.7e-28
Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 1

Query: 1   MSLASEERSKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLN 60
           M+L S  RS LNPNAPLFIPAA+ QVEDFSP+WWQL+TTS WYHDYWLSQHQ+E  F  N
Sbjct: 1   MALVSGGRSTLNPNAPLFIPAAFRQVEDFSPEWWQLITTSPWYHDYWLSQHQDEDAFYSN 60

Query: 61  SEDDYD-IAEFLPLALDLEGNEELRTMEAEFEEFIQASLNEG 101
           ++DD D +A+ LP   DL+  +E   +EA+FEEFI+ S  EG
Sbjct: 61  ADDDIDNVADLLPETFDLDAGDEFSNIEAQFEEFIEFSETEG 102

BLAST of CmaCh07G013490 vs. TrEMBL
Match: A0A061EXG3_THECC (Dehydration-induced protein, putative OS=Theobroma cacao GN=TCM_024484 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.2e-26
Identity = 66/104 (63.46%), Postives = 77/104 (74.04%), Query Frame = 1

Query: 1   MSLASEERSKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLN 60
           M+L +  RS LNPNAPLFIPA Y QVEDFSP+WWQLVTTSTWY DYWLSQHQ+E  F  N
Sbjct: 1   MALVAGGRSTLNPNAPLFIPAVYRQVEDFSPEWWQLVTTSTWYRDYWLSQHQDEDGFYDN 60

Query: 61  SEDD----YDIAEFLPLALDLEGNEELRTMEAEFEEFIQASLNE 100
           +EDD     DIA+ LP   DL  +E+L  M+ +FEEFIQ+  NE
Sbjct: 61  AEDDGFDGNDIADLLPDTFDLVADEDLSGMDLQFEEFIQSYENE 104

BLAST of CmaCh07G013490 vs. TrEMBL
Match: A0A165YEK0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_013620 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.8e-26
Identity = 62/98 (63.27%), Postives = 79/98 (80.61%), Query Frame = 1

Query: 1  MSLASEERSKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLN 60
          M+L S  RS LNPNAPLF+PAA  QVEDFSP+WWQLVTTSTW+HDYW+SQ Q + DF  N
Sbjct: 1  MALVSGGRSSLNPNAPLFVPAAVRQVEDFSPEWWQLVTTSTWFHDYWVSQQQGDDDFYGN 60

Query: 61 SEDDY-DIAEFLPLALDLEGNEELRTMEAEFEEFIQAS 97
          +EDD  DI + LP ++DL  +EEL +MEA++E+FIQ++
Sbjct: 61 NEDDLADIVDLLPDSIDLGADEELMSMEAQYEQFIQSA 98

BLAST of CmaCh07G013490 vs. TrEMBL
Match: A0A067K1V9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22456 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 6.3e-26
Identity = 61/100 (61.00%), Postives = 76/100 (76.00%), Query Frame = 1

Query: 1   MSLASEERSKLNPNAPLFIPAAYQ-VEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLN 60
           M+L S  RS LNP+APLFIPAAYQ VEDFSP+WWQLVTTSTWY DYWLSQHQ+E  F  N
Sbjct: 1   MALVSGGRSTLNPDAPLFIPAAYQQVEDFSPEWWQLVTTSTWYRDYWLSQHQDEEGFYDN 60

Query: 61  SEDD----YDIAEFLPLALDLEGNEELRTMEAEFEEFIQA 96
           +EDD     D+A+ LP   DL+  E+  T+E +F+EF+++
Sbjct: 61  AEDDSYDACDVADLLPDTFDLDAGEDFSTLEVQFQEFVES 100

BLAST of CmaCh07G013490 vs. TAIR10
Match: AT2G41430.1 (AT2G41430.1 dehydration-induced protein (ERD15))

HSP 1 Score: 94.4 bits (233), Expect = 4.6e-20
Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 1

Query: 1  MSLASEERSKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYHDYWLSQHQEESD-FSL 60
          M++ S  RS LNP+APLFIPAA  QVEDFSP+WWQLVTTSTWY DYW+SQ Q+ +D F  
Sbjct: 1  MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60

Query: 61 NSEDD-----YDIAEFLPLALDLEGNEE-LRTMEAEFEE 92
          N E++      D+A+ LP + D +  E+   T  AEF++
Sbjct: 61 NGENENGGGHIDVADLLPESFDFDDMEDFFDTDAAEFDQ 99

BLAST of CmaCh07G013490 vs. TAIR10
Match: AT4G14270.1 (AT4G14270.1 Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins.)

HSP 1 Score: 71.6 bits (174), Expect = 3.2e-13
Identity = 40/89 (44.94%), Postives = 50/89 (56.18%), Query Frame = 1

Query: 9  SKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLNSEDDYDIA 68
          S LNPNAP+F P  + +VEDFSP+WW LVTTS W+ D+WLS + E               
Sbjct: 10 STLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSEN-------------- 69

Query: 69 EFLPLALDLEGNEELRTMEAEFEEFIQAS 97
          EFL       G ++   ME EFEE I +S
Sbjct: 70 EFL-------GGDDFSVMEEEFEEMIASS 77

BLAST of CmaCh07G013490 vs. NCBI nr
Match: gi|525507437|ref|NP_001267508.1| (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus])

HSP 1 Score: 165.6 bits (418), Expect = 4.6e-38
Identity = 87/105 (82.86%), Postives = 92/105 (87.62%), Query Frame = 1

Query: 1   MSLASEE-RSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLN 60
           M+LAS E  SKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWY DYWLSQHQEESDF ++
Sbjct: 1   MALASVEGSSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEESDFYID 60

Query: 61  --SEDDY--DIAEFLPLALDLEGNEELRTMEAEFEEFIQASLNEG 101
              EDD+  DIAEFLP A DL+ NEELRTMEAEFEEFIQASLNEG
Sbjct: 61  GEGEDDFSNDIAEFLPEAFDLDANEELRTMEAEFEEFIQASLNEG 105

BLAST of CmaCh07G013490 vs. NCBI nr
Match: gi|703123054|ref|XP_010102715.1| (hypothetical protein L484_015513 [Morus notabilis])

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27
Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 1

Query: 1   MSLASEERSKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLN 60
           M+L S  RS LNPNAPLFIPAA+ QVEDFSP+WWQL+TTS WYHDYWLSQHQ+E  F  N
Sbjct: 1   MALVSGGRSTLNPNAPLFIPAAFRQVEDFSPEWWQLITTSPWYHDYWLSQHQDEDAFYSN 60

Query: 61  SEDDYD-IAEFLPLALDLEGNEELRTMEAEFEEFIQASLNEG 101
           ++DD D +A+ LP   DL+  +E   +EA+FEEFI+ S  EG
Sbjct: 61  ADDDIDNVADLLPETFDLDAGDEFSNIEAQFEEFIEFSETEG 102

BLAST of CmaCh07G013490 vs. NCBI nr
Match: gi|590635295|ref|XP_007028595.1| (Dehydration-induced protein, putative [Theobroma cacao])

HSP 1 Score: 126.3 bits (316), Expect = 3.1e-26
Identity = 66/104 (63.46%), Postives = 77/104 (74.04%), Query Frame = 1

Query: 1   MSLASEERSKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLN 60
           M+L +  RS LNPNAPLFIPA Y QVEDFSP+WWQLVTTSTWY DYWLSQHQ+E  F  N
Sbjct: 1   MALVAGGRSTLNPNAPLFIPAVYRQVEDFSPEWWQLVTTSTWYRDYWLSQHQDEDGFYDN 60

Query: 61  SEDD----YDIAEFLPLALDLEGNEELRTMEAEFEEFIQASLNE 100
           +EDD     DIA+ LP   DL  +E+L  M+ +FEEFIQ+  NE
Sbjct: 61  AEDDGFDGNDIADLLPDTFDLVADEDLSGMDLQFEEFIQSYENE 104

BLAST of CmaCh07G013490 vs. NCBI nr
Match: gi|1021041237|gb|KZM99018.1| (hypothetical protein DCAR_013620 [Daucus carota subsp. sativus])

HSP 1 Score: 125.9 bits (315), Expect = 4.0e-26
Identity = 62/98 (63.27%), Postives = 79/98 (80.61%), Query Frame = 1

Query: 1  MSLASEERSKLNPNAPLFIPAAY-QVEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLN 60
          M+L S  RS LNPNAPLF+PAA  QVEDFSP+WWQLVTTSTW+HDYW+SQ Q + DF  N
Sbjct: 1  MALVSGGRSSLNPNAPLFVPAAVRQVEDFSPEWWQLVTTSTWFHDYWVSQQQGDDDFYGN 60

Query: 61 SEDDY-DIAEFLPLALDLEGNEELRTMEAEFEEFIQAS 97
          +EDD  DI + LP ++DL  +EEL +MEA++E+FIQ++
Sbjct: 61 NEDDLADIVDLLPDSIDLGADEELMSMEAQYEQFIQSA 98

BLAST of CmaCh07G013490 vs. NCBI nr
Match: gi|802725118|ref|XP_012085962.1| (PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15 [Jatropha curcas])

HSP 1 Score: 124.8 bits (312), Expect = 9.0e-26
Identity = 61/100 (61.00%), Postives = 76/100 (76.00%), Query Frame = 1

Query: 1   MSLASEERSKLNPNAPLFIPAAYQ-VEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLN 60
           M+L S  RS LNP+APLFIPAAYQ VEDFSP+WWQLVTTSTWY DYWLSQHQ+E  F  N
Sbjct: 1   MALVSGGRSTLNPDAPLFIPAAYQQVEDFSPEWWQLVTTSTWYRDYWLSQHQDEEGFYDN 60

Query: 61  SEDD----YDIAEFLPLALDLEGNEELRTMEAEFEEFIQA 96
           +EDD     D+A+ LP   DL+  E+  T+E +F+EF+++
Sbjct: 61  AEDDSYDACDVADLLPDTFDLDAGEDFSTLEVQFQEFVES 100

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ERD15_ARATH8.1e-1953.54Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana GN=ERD15 PE=1... [more]
CID2_ARATH5.7e-1244.94Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana GN=C... [more]
Match NameE-valueIdentityDescription
Q6ELF8_CUCSA3.2e-3882.86Poly(A)-binding protein C-terminal interacting protein 243 OS=Cucumis sativus GN... [more]
W9S851_9ROSA8.7e-2862.75Uncharacterized protein OS=Morus notabilis GN=L484_015513 PE=4 SV=1[more]
A0A061EXG3_THECC2.2e-2663.46Dehydration-induced protein, putative OS=Theobroma cacao GN=TCM_024484 PE=4 SV=1[more]
A0A165YEK0_DAUCA2.8e-2663.27Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_013620 PE=4 SV=1[more]
A0A067K1V9_JATCU6.3e-2661.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22456 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G41430.14.6e-2053.54 dehydration-induced protein (ERD15)[more]
AT4G14270.13.2e-1344.94 Protein containing PAM2 motif which mediates interaction with the PA... [more]
Match NameE-valueIdentityDescription
gi|525507437|ref|NP_001267508.1|4.6e-3882.86protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus][more]
gi|703123054|ref|XP_010102715.1|1.3e-2762.75hypothetical protein L484_015513 [Morus notabilis][more]
gi|590635295|ref|XP_007028595.1|3.1e-2663.46Dehydration-induced protein, putative [Theobroma cacao][more]
gi|1021041237|gb|KZM99018.1|4.0e-2663.27hypothetical protein DCAR_013620 [Daucus carota subsp. sativus][more]
gi|802725118|ref|XP_012085962.1|9.0e-2661.00PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009818Ataxin-2_C
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G013490.1CmaCh07G013490.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009818Ataxin-2, C-terminalPFAMPF07145PAM2coord: 7..20
score: 9.
NoneNo IPR availablePANTHERPTHR33790FAMILY NOT NAMEDcoord: 2..105
score: 2.3
NoneNo IPR availablePANTHERPTHR33790:SF1PROTEIN EARLY RESPONSIVE TO DEHYDRATION 15coord: 2..105
score: 2.3

The following gene(s) are paralogous to this gene:

None