CmaCh07G000170 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.AACTCCGGTTGAAAAGTGGAGCTAGGCGACAGAAGCTTTATGAAGCTGGCTGGGGCTTTGTTCTGGTCGACGACGGATTGCGATCTTCTTCAGTAACGGCGGTAACTGCAGTCGCACAATGTGAATTGACATAAATACCCCCACACCCCAGCTATATATATATTTCACTTTATCAATTAACTAATGAACTTAAAAGATAAAATAAAAAATCTCCAAACGGCATTAAAAAAATATTTAATAATATACCCTAATTTATTTTCAATTTTTTTAATATAAATAATTTCCTTAATTTTAATTTTGCGTCATTCGTTATCCTTGATTCGTCAGCGTTATCTCCCTCCAAATCGACCTCTCAATTTAGTCCTCTTTCCCATAGCTGCCGGTAGTTCCACGGTGGCCGGATGCGCAACACCACGCTGGCTGTGCACTCTCATCACGCTCGTCTCGCTCTCACGAAGGTTCATTCCACACCAGTAAGCCCCCTCCACTATTTTTCTTTTCTTGTTCGTATTTTCGTCGTGTATGAAAGGAAAATGAAAGTACTAAAACTTGTTGCTGCTGAAAGAAGAATCAATAGCTGATACTAACTGCTGCTAGAACTGTGTCGTTTCTGTTAGGTGCTTAGCAAGATATTATATGTTTGTGTTTCATGTGGAGTGTGAGTTTTTGTATACCAAAATTCATTTTGCTAGAAGCTGATTGATAGAGAAGATTGAAGGAAGGGGTCGAAAGAAGAATTGGAAGTAATGTCTGCGACACTATTGTCTTATTGCAATCCAAGGTTAGCTTGTAATTACGGGAGGATGAATACGGAACGCACTGCATTCGGACACTTACGGCCTATTGGAAGGAGAATCAATGGGTATCGCAAGCTTACTGTGTTTTCCGTTACTGAAGGGTCTGCAAAATCGAGCGAGTCTGAAGAAACAATCCCTTCCTGGGCTAAACCTGATTCGGAGGAGCCTCCTCCTTGGGCAAGGGAGGAAGTCAAAGAAACTGGATCCCAACTGGGATTTCAGGTCCCTTTCTACGTTTACTTACTCGCCTCATCTATCACTGCAATTGCCGCTGTAAGCTTTCCTCTCACCACAGACTTGTTTATGGAATTTTGGATATGTATTCTTGTTCTAAGGGCCAGTTTACTCAAATTTAAACAGAAACAAACGACATTATTACCTCGCTTTAACAGTCTTTTATATGAAATAAGGAGAGAACAACATTGTAAGAATTTAAACTTGAAACTCCAAAAGAATGCATTAATGGCTTTTGCGGACTGAATTGTGGATAGAATCAACCGTTTTTTTTTTTTTTTTTTTCTTGGAAAGAATCCATTAGCTTCTTGGTAACTATGGCATATTTTAACTGGTTGAACTGTTAGTTCTTCAGCAGCAGCATGTTGTCATATGTAATTCATTTATTTGTTCAGCAGCATATGATTAAGCTACAGATACTAATTCCAATTGAAACTGTTTGTTTGCTTGTTTGTTTGTTGGAACTACTTCCAACTGTGCAGATAGGTTCAGTATTTGAGTACGTCAACCAGAAGCCTGTGTTTGGAATCATAAACTCAGACAGCATATTTTACGCTCCATTGCTTGGATTTTTCGCATTTACGGGCATTCCTACTGCCGTAAGTTCTACCATCTCCATTTTTTTGACATTTGTGAAGGGCTTATCACATCTCTTGGTATGCATTTATCATACCATGAAGCTACAACATTAGTTTTTGCGGTCTATATAATGAAGACAAATGCATTTATCCATCTTTCTTTGGGGGGATTCAGAAAATTGAATATAACAAACAAATAATTTGCAGAAATAGGAAGTCCCACTTACAAGGCTCTCTCTCTCTCTCTCTATCTATCTAATTTGTCGAGACAGGGATTCCTTTGGTTCAAATCTGTGGAAGTTGCCAATAAGGAAGCTGAGGATCAAGACAGAAGGGATGGCTACTTGTAG AACTCCGGTTGAAAAGTGGAGCTAGGCGACAGAAGCTTTATGAAGCTGGCTGGGGCTTTGTTCTGGTCGACGACGGATTGCGATCTTCTTCAGTAACGGCGCGTTATCTCCCTCCAAATCGACCTCTCAATTTAGTCCTCTTTCCCATAGCTGCCGGTAGTTCCACGGTGGCCGGATGCGCAACACCACGCTGGCTGTGCACTCTCATCACGCTCGTCTCGCTCTCACGAAGGTTCATTCCACACCAGTGCTTAGCAAGATATTATATGTTTGTGTTTCATGTGGAGTGTGAGTTTTTGTATACCAAAATTCATTTTGCTAGAAGCTGATTGATAGAGAAGATTGAAGGAAGGGGTCGAAAGAAGAATTGGAAGTAATGTCTGCGACACTATTGTCTTATTGCAATCCAAGGTTAGCTTGTAATTACGGGAGGATGAATACGGAACGCACTGCATTCGGACACTTACGGCCTATTGGAAGGAGAATCAATGGGTATCGCAAGCTTACTGTGTTTTCCGTTACTGAAGGGTCTGCAAAATCGAGCGAGTCTGAAGAAACAATCCCTTCCTGGGCTAAACCTGATTCGGAGGAGCCTCCTCCTTGGGCAAGGGAGGAAGTCAAAGAAACTGGATCCCAACTGGGATTTCAGGTCCCTTTCTACGTTTACTTACTCGCCTCATCTATCACTGCAATTGCCGCTATAGGTTCAGTATTTGAGTACGTCAACCAGAAGCCTGTGTTTGGAATCATAAACTCAGACAGCATATTTTACGCTCCATTGCTTGGATTTTTCGCATTTACGGGCATTCCTACTGCCGGATTCCTTTGGTTCAAATCTGTGGAAGTTGCCAATAAGGAAGCTGAGGATCAAGACAGAAGGGATGGCTACTTGTAG ATGTCTGCGACACTATTGTCTTATTGCAATCCAAGGTTAGCTTGTAATTACGGGAGGATGAATACGGAACGCACTGCATTCGGACACTTACGGCCTATTGGAAGGAGAATCAATGGGTATCGCAAGCTTACTGTGTTTTCCGTTACTGAAGGGTCTGCAAAATCGAGCGAGTCTGAAGAAACAATCCCTTCCTGGGCTAAACCTGATTCGGAGGAGCCTCCTCCTTGGGCAAGGGAGGAAGTCAAAGAAACTGGATCCCAACTGGGATTTCAGGTCCCTTTCTACGTTTACTTACTCGCCTCATCTATCACTGCAATTGCCGCTATAGGTTCAGTATTTGAGTACGTCAACCAGAAGCCTGTGTTTGGAATCATAAACTCAGACAGCATATTTTACGCTCCATTGCTTGGATTTTTCGCATTTACGGGCATTCCTACTGCCGGATTCCTTTGGTTCAAATCTGTGGAAGTTGCCAATAAGGAAGCTGAGGATCAAGACAGAAGGGATGGCTACTTGTAG MSATLLSYCNPRLACNYGRMNTERTAFGHLRPIGRRINGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWAREEVKETGSQLGFQVPFYVYLLASSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRDGYL
BLAST of CmaCh07G000170 vs. TrEMBL
Match: A0A0A0KIJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G527080 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.2e-79 Identity = 152/172 (88.37%), Postives = 157/172 (91.28%), Query Frame = 1
BLAST of CmaCh07G000170 vs. TrEMBL
Match: A0A059AHK4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02573 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 2.8e-55 Identity = 117/185 (63.24%), Postives = 143/185 (77.30%), Query Frame = 1
BLAST of CmaCh07G000170 vs. TrEMBL
Match: A0A061EZQ5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_025280 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.5e-53 Identity = 100/131 (76.34%), Postives = 120/131 (91.60%), Query Frame = 1
BLAST of CmaCh07G000170 vs. TrEMBL
Match: V4UVI8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012864mg PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.4e-53 Identity = 104/130 (80.00%), Postives = 118/130 (90.77%), Query Frame = 1
BLAST of CmaCh07G000170 vs. TrEMBL
Match: A0A067EQC5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029685mg PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.4e-53 Identity = 104/130 (80.00%), Postives = 118/130 (90.77%), Query Frame = 1
BLAST of CmaCh07G000170 vs. TAIR10
Match: AT3G51510.1 (AT3G51510.1 unknown protein) HSP 1 Score: 189.1 bits (479), Expect = 2.2e-48 Identity = 97/145 (66.90%), Postives = 115/145 (79.31%), Query Frame = 1
BLAST of CmaCh07G000170 vs. NCBI nr
Match: gi|659077922|ref|XP_008439458.1| (PREDICTED: uncharacterized protein LOC103484254 [Cucumis melo]) HSP 1 Score: 307.4 bits (786), Expect = 1.6e-80 Identity = 154/172 (89.53%), Postives = 160/172 (93.02%), Query Frame = 1
BLAST of CmaCh07G000170 vs. NCBI nr
Match: gi|449473313|ref|XP_004153846.1| (PREDICTED: uncharacterized protein LOC101218426 isoform X2 [Cucumis sativus]) HSP 1 Score: 303.9 bits (777), Expect = 1.8e-79 Identity = 152/172 (88.37%), Postives = 157/172 (91.28%), Query Frame = 1
BLAST of CmaCh07G000170 vs. NCBI nr
Match: gi|778721804|ref|XP_011658355.1| (PREDICTED: uncharacterized protein LOC101218426 isoform X1 [Cucumis sativus]) HSP 1 Score: 263.8 bits (673), Expect = 2.0e-67 Identity = 135/169 (79.88%), Postives = 146/169 (86.39%), Query Frame = 1
BLAST of CmaCh07G000170 vs. NCBI nr
Match: gi|702482897|ref|XP_010033625.1| (PREDICTED: uncharacterized protein LOC104422872 isoform X2 [Eucalyptus grandis]) HSP 1 Score: 223.0 bits (567), Expect = 4.0e-55 Identity = 117/185 (63.24%), Postives = 143/185 (77.30%), Query Frame = 1
BLAST of CmaCh07G000170 vs. NCBI nr
Match: gi|702482892|ref|XP_010033624.1| (PREDICTED: uncharacterized protein LOC104422872 isoform X1 [Eucalyptus grandis]) HSP 1 Score: 223.0 bits (567), Expect = 4.0e-55 Identity = 117/185 (63.24%), Postives = 143/185 (77.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |