ClCG01G025710 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGCGACGCTGTTGTCTTATTGCAATCCAAGTCTAGCTTGTAATTACGGGAGGGTGGATTTGAAACGCATGGCTTTCGGACATTTACGGTCTATTGGAAGGAGAAACAATGGCTATCGCAAGCTTACTGTGTTTTCCGTTACAGAAGGATCTGCAAAATCGAGCGAGTCTGAAGAAACAATTCCTTCTTGGGCCAAACCTGATTCGGAGGAGCCCCCTCCTTGGACAAGGGAAGAAGGCAAGGAAAGTGGAAACAATCAGGGCTTTCAGGTCCCTTTCTATATTTACTTGCTCGCCTCATCTATCACTGCAATTGCAGCTGTAAGCTTCCCTCTAACTGGAGACTTGTTTTTGGTATTTTTGAAAGTGTTATTGCTACTAACTGCTGCAGTACTCCAGTTCGCTCAGAATTTAATAGAAGCAAACGACTTCATCACCTCCTGTTAACACAATCATTTATATGAAAAAAGGAGAACTTGTAACGCTGTAATTTGATATCCTTTTAAATCACTACTAACTACGATCAAAAGAATGCATTAATGGCTCTTGCAGACTGGATTGTGAATAGAATGAACTTTTTTGTTTTTTTGGAAACATTTGTCAACTTCTTGGAAAACTGTGGCCTATTTGGCAACCATTTGTTTGATGGCAGTCTCTAGTCGTTCCTTTATCTTGTATTGCATATTTGTTCATATCTAGAATTAAGAGAGTGATATGTTAATTGCCAATCAAATTATATTAATATTTTAATACATTCTTACCTTTTAGGAGGCTCAACAAGTGAAAATCAATATTAATTAGAGAGAAAAGAACATTACATTGTTTGAACATAAAACCTTCTATTTTGATGTCATGTTAAATCTCCAATTAACTTCAACAGCGGTTATAAAAAAGAAAGAAAATCTTGACAAGTTATGGTAAATTTAATTATATCAATAAACATGATTAAAAAATCAATTTAATGCAGTAATGCGGTAGAGGTGATTGTATGTAATTAATTTATTTCTTCAGCAATGTATGATAAAGTTTGGTGCTGCGGATACTAATTCTAATCGAAGCGGTTTGTATGTTTATTGGAACGACTTCGAAATCTGCAGATAGGTTCCATATTCGAGTACGTCAACCAGAAGCCTGTCTTTGGACTTATAAATTCAGACAGCATATTGTACGCTCCAGTGCTTGGATTTTTCGCATTTACTGGCATTCCTACTGCTGTAAGTTCCTCTGTCCCCAAGTTTTGACATTTGTGAAGGGATTATTACATCTCTTCGTATGCGTTTATCATAGCATGAAATTATAACATTAACCTTTTGCGTCTCTCTAATGAACGATCATAAATAGGAAGTATCCATCTTTCTGTGTTTTTTGTTGAGGGGAGCGGAAAATTGAATATAAAAATTTAAAAATCAAACATGGTGTCCTCTTCTCTGAGTTGCATCAATTCTTAGCTAGAAACGTTGCACACAAGGTACCGTATACTGTGTCAACTGCAAAGGGAGTAATAAGAAGAATGACAATACCATTGCAAAAACACGAACTCCCGCTTACAAGGCTCTCTATCTAATTTCTCGAGACAGGCATTCCTTTGGTTCAAATCTGTTGAAGTTGCTAATAAGGAAGCTGAGGATCAGGACAGAAGGGATGGTTACTTGTAGAGTATTTTTCTCTAACACGAATTTGTTGTCCTTTGAATACTCTTCCCC ATGTCTGCGACGCTGTTGTCTTATTGCAATCCAAGTCTAGCTTGTAATTACGGGAGGGTGGATTTGAAACGCATGGCTTTCGGACATTTACGGTCTATTGGAAGGAGAAACAATGGCTATCGCAAGCTTACTGTGTTTTCCGTTACAGAAGGATCTGCAAAATCGAGCGAGTCTGAAGAAACAATTCCTTCTTGGGCCAAACCTGATTCGGAGGAGCCCCCTCCTTGGACAAGGGAAGAAGGCAAGGAAAGTGGAAACAATCAGGGCTTTCAGGTCCCTTTCTATATTTACTTGCTCGCCTCATCTATCACTGCAATTGCAGCTGTAAGCTTCCCTCTAACTGGAGACTTGTTTTTGATAGGTTCCATATTCGAGTACGTCAACCAGAAGCCTGTCTTTGGACTTATAAATTCAGACAGCATATTGTACGCTCCAGTGCTTGGATTTTTCGCATTTACTGGCATTCCTACTGCTGCATTCCTTTGGTTCAAATCTGTTGAAGTTGCTAATAAGGAAGCTGAGGATCAGGACAGAAGGGATGGTTACTTGTAGAGTATTTTTCTCTAACACGAATTTGTTGTCCTTTGAATACTCTTCCCC ATGTCTGCGACGCTGTTGTCTTATTGCAATCCAAGTCTAGCTTGTAATTACGGGAGGGTGGATTTGAAACGCATGGCTTTCGGACATTTACGGTCTATTGGAAGGAGAAACAATGGCTATCGCAAGCTTACTGTGTTTTCCGTTACAGAAGGATCTGCAAAATCGAGCGAGTCTGAAGAAACAATTCCTTCTTGGGCCAAACCTGATTCGGAGGAGCCCCCTCCTTGGACAAGGGAAGAAGGCAAGGAAAGTGGAAACAATCAGGGCTTTCAGGTCCCTTTCTATATTTACTTGCTCGCCTCATCTATCACTGCAATTGCAGCTGTAAGCTTCCCTCTAACTGGAGACTTGTTTTTGATAGGTTCCATATTCGAGTACGTCAACCAGAAGCCTGTCTTTGGACTTATAAATTCAGACAGCATATTGTACGCTCCAGTGCTTGGATTTTTCGCATTTACTGGCATTCCTACTGCTGCATTCCTTTGGTTCAAATCTGTTGAAGTTGCTAATAAGGAAGCTGAGGATCAGGACAGAAGGGATGGTTACTTGTAG MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
BLAST of ClCG01G025710 vs. TrEMBL
Match: A0A0A0KIJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G527080 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 3.3e-83 Identity = 156/183 (85.25%), Postives = 163/183 (89.07%), Query Frame = 1
BLAST of ClCG01G025710 vs. TrEMBL
Match: A0A059AHK4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02573 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 4.7e-53 Identity = 108/196 (55.10%), Postives = 140/196 (71.43%), Query Frame = 1
BLAST of ClCG01G025710 vs. TrEMBL
Match: M5W3J2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011983mg PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 8.0e-53 Identity = 112/198 (56.57%), Postives = 140/198 (70.71%), Query Frame = 1
BLAST of ClCG01G025710 vs. TrEMBL
Match: A9PCJ0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s46010g PE=2 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 5.2e-52 Identity = 109/189 (57.67%), Postives = 136/189 (71.96%), Query Frame = 1
BLAST of ClCG01G025710 vs. TrEMBL
Match: A0A061EZQ5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_025280 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 5.2e-52 Identity = 99/142 (69.72%), Postives = 119/142 (83.80%), Query Frame = 1
BLAST of ClCG01G025710 vs. TAIR10
Match: AT3G51510.1 (AT3G51510.1 unknown protein) HSP 1 Score: 186.0 bits (471), Expect = 2.0e-47 Identity = 93/156 (59.62%), Postives = 111/156 (71.15%), Query Frame = 1
BLAST of ClCG01G025710 vs. NCBI nr
Match: gi|449473313|ref|XP_004153846.1| (PREDICTED: uncharacterized protein LOC101218426 isoform X2 [Cucumis sativus]) HSP 1 Score: 315.8 bits (808), Expect = 4.8e-83 Identity = 156/183 (85.25%), Postives = 163/183 (89.07%), Query Frame = 1
BLAST of ClCG01G025710 vs. NCBI nr
Match: gi|659077922|ref|XP_008439458.1| (PREDICTED: uncharacterized protein LOC103484254 [Cucumis melo]) HSP 1 Score: 315.1 bits (806), Expect = 8.2e-83 Identity = 156/183 (85.25%), Postives = 165/183 (90.16%), Query Frame = 1
BLAST of ClCG01G025710 vs. NCBI nr
Match: gi|778721804|ref|XP_011658355.1| (PREDICTED: uncharacterized protein LOC101218426 isoform X1 [Cucumis sativus]) HSP 1 Score: 272.3 bits (695), Expect = 6.1e-70 Identity = 137/180 (76.11%), Postives = 150/180 (83.33%), Query Frame = 1
BLAST of ClCG01G025710 vs. NCBI nr
Match: gi|702482897|ref|XP_010033625.1| (PREDICTED: uncharacterized protein LOC104422872 isoform X2 [Eucalyptus grandis]) HSP 1 Score: 215.7 bits (548), Expect = 6.7e-53 Identity = 108/196 (55.10%), Postives = 140/196 (71.43%), Query Frame = 1
BLAST of ClCG01G025710 vs. NCBI nr
Match: gi|702482892|ref|XP_010033624.1| (PREDICTED: uncharacterized protein LOC104422872 isoform X1 [Eucalyptus grandis]) HSP 1 Score: 215.7 bits (548), Expect = 6.7e-53 Identity = 108/196 (55.10%), Postives = 140/196 (71.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |