CmaCh06G016860 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G016860
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transmembrane protein, putative
Location	Cma_Chr06 : 10389756 .. 10392921 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACACCCCCAGAGAGGCCAAAGAAAACCTCCGCCAAATTGCCGCACAAACAGCGCCAAATCCCAAAAGATCAGAACTGTATGCCATATGCCAAGAAGCTATTAGGCGATCTAAAGGCCGTCGTTATCCATTGCCCAACTCCCAATTCCTCTCCATTACGTGTAACCCGCCAAATCTTCCCTCTCATTTCACCGCCCTCTTTTCAATCCCTAATCCTTTCCTCATGTTTATCCCAATACTAATTCACTTTCTTCACTCTGTTTCTCTCAATCCGAACTGAAATTGGAGGAAATTGTGAACAAGAACTTTCTGGGAGACCGGAAAAGGGTTCGTTAGTTCAATATTTGAGTTGGGTTTTCACCGTTCTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATGCATTTAGTCGTGTGTTGAATTCTTAAGAAACAAACAAAAGTTTGCTTATCAGACTTATCCACTCGCTGTTGTGGTTGCTGTTGAGGGGTTTTAGTGTTGCCAATCCAATCACGGACCCCCCCCCCAGTTCCATAAAGTTCCTTAGATTTATCAATTTCCCTTCAATCTTTCAACAAAAGCGTTTCTGGGTTTTCGTTCTCGACGTTGAGAGGATTTTCCCTTTTGGAGATTTGGAGATTTTTTGACCGAAGAATTATGATGCGGCGGCAGCAGCGGCGGAATTCGCAATCGAGTGTTTTCTACGAGCTTTCTTCTCTTGCCATGAATATTCTCCGATCGCCTCCGTCGTCAATCCCGTTTGCCGATCACTCGCCGGTGGTGCCGACGCAGATGACCCCGGCGCGGTTTGCGTCGCTTCTTCTAGGGATGTCTCTGGCTCTGATGCTCTGTGGATCGGTTACGTTCTTCATCGGCTTCATGATGATGCCTTGGGTTATTGGATTGGTTATGTTTTTCTTTGCCGCCGCCGTTGTTTCGAGCCTCTTCATGATCGGACGTTCGATTTTATACTACGTTACGGCTCAGCCTGCGCCCAGAAAGGACATCCCAGGTACGGCGATTCGTTTTGATGATTTTCTCACGATTATTGATTTCTCTTTGATGCGATTTTCTTGTTTCTGAATGATGCCTTATTCATTAGTTTCGGATCTTAGATGTAAATCTCTGTTCGATTTATATGTTGAATCTGTTCAAAGCAAATTGCCCACATGATTCAAATTCTACTTGTCTTTTAAGAATCAACGATGGGATGGCTTTTAGGTCCAAATTTCTGAAGATAAACCATGATTGTTCATTGTATTCAAGAACAACCCATTTGTGGAAATAAGATTTTCTCTTCCAAAACAGAGAGAAGAAAGCTTCCAAACGACCTCTAACATTGAAACCGTACAATCTCAGAGTTTAAACCAATTTTGCTTCTTTTGAAGGGTCGGTTCAGGTTGATCTTTCCAAAAGTGTCTATTTCACATTAGCTTTGTCGTGCAAGGCACCATGACATAGACGAAATATCTCACATTTTTCTTCTTGAAAAACAGGACGTTCAGGTCCCATTCCTTGCTTTTGTGCTCACCAGGCTTTGACAAACAGCGATGCTCACCAGGCTTTAAAATTACCTCCAGACGTCCCAATCCTTTACTATTATTAAGCCCACCAAACTTGTCAAGGCTTTATACTTTACTATTAGGCCGCCCAAACTTGTCAAGGCGTTGGAAAAGGTCATTGTGAGATGTCAAGCTCTTTTAGGCCCACAAGCTTGTCAAGCCATGGGTTAAGCATTGGAAAAAGACATTGCGAGGATGCCAACCTCTATTTGGCTTATACTTTACTGTTAGGGCCACCAAACTTGTTTGCCTCGTAGGGGTGGAGTTCTATTTTCATTCACACTCAACAACTTGCTTGTGAACCCATCAATATGCTCGAGCTGCCTATGCTCTACAACTTCTGATGAGGATCGAGTTCAGGGAGTTTTGGTGTAATAGCCCAAACCCACCGTTAACCGATATTATCCTCTTTGGGTTTTTCCTTCTGAACTTTTCCTCTTAAGGTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTAATAAAGGATGTTTCGTTTCACTATCCAACCTATGTGGGATCTCAAATTTTGAGTTGTTTGTTCTAGTTTGAAATTGAGTTGAAAAAATGTATATGGCTGCTTCCTAATCGAGAATGGTTCATTGCATCGCCGTCCTTGGACATGTATATATACTAGAATCTTTAGAGAATGTCAACTTGGTACCAATAGAAACAGGAAAAAGTTCCTCTTCTGGTCTGCAACTCCGAGTTTTTTGGGCTGTTTATACTCCTAAATGGAGTCTAATTGTCTTCTTTGTTACCTTGTAAGCTGTCTCTAGCATTTCATAATTTCATTTAAATGTCTCGAGGGGCAAAACTCATTGGAACTTTTTTAAGTGACTTCTTAGCCAAGGAGTTATATCAATTGTCAAAACGTTTCTTGCTCGATCTTGAAGTAAAAGCTGGATGATTCAATGCTGCATTTTATTACTTGTCTCTCTGCTTTATTAGTTAATACTTATAAATGCCTTGCATTTCATCGTTGGTAGAGTGATAGGAGGACTAAGAAGATTAGCTAGCCTCTCAATTATCTCCCTTTCGAATTAGATGTTTTAATCAACAGCTATCTCGTCTTTCGTTCGTGTTTTTTTGTTTGTAACAATCATAACATTTACTTTTGTGGCTGCAGCTTGGAAGTTAATGTGAAGAGGACGCTGATGTTTGAAACTAGCAATTATTGTTTATGGTGGTTGTGGAGGGCTCTAATATCCTCGGTGCTGTGCTGCGCTGCCTGTTGGCTTTCTTCTCGACTCGACTCGGCTGAGAAGAAGTGTTTGTTAATATTATATTTCATACTGGATCCTGTTCATATTGTTTCTGTTAAATTGAAGGGAGCAAACTTCTGTTGGAGGTGGGGACGTTGCTCCATTTCATTTCCTCCTCTTGGTATCCCATAGGCCATAGCCATACCTTTAGAGGTAAATTGTGTTTTGATTATAGAAGAAGTAATTAGCAGCTACTGAATTCTCTCCTGATTATCTTCCTAGCATTACTGAATTCTCAAAGATCGCGAGCTGGCCTCGTCCCTTCTTCGTTGAAGGTTTATGTTGCCTTGCTCGGGTCCGGGATGGGGAAGGCTTTAGCAAAAAATGCCTAG

mRNA sequence

TCACACCCCCAGAGAGGCCAAAGAAAACCTCCGCCAAATTGCCGCACAAACAGCGCCAAATCCCAAAAGATCAGAACTGTATGCCATATGCCAAGAAGCTATTAGGCGATCTAAAGGCCGTCGTTATCCATTGCCCAACTCCCAATTCCTCTCCATTACGTGTAACCCGCCAAATCTTCCCTCTCATTTCACCGCCCTCTTTTCAATCCCTAATCCTTTCCTCATGTTTATCCCAATACTAATTCACTTTCTTCACTCTGTTTCTCTCAATCCGAACTGAAATTGGAGGAAATTGTGAACAAGAACTTTCTGGGAGACCGGAAAAGGGTTCGTTAGTTCAATATTTGAGTTGGGTTTTCACCGTTCTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATGCATTTAGTCGTGTGTTGAATTCTTAAGAAACAAACAAAAGTTTGCTTATCAGACTTATCCACTCGCTGTTGTGGTTGCTGTTGAGGGGTTTTAGTGTTGCCAATCCAATCACGGACCCCCCCCCCAGTTCCATAAAGTTCCTTAGATTTATCAATTTCCCTTCAATCTTTCAACAAAAGCGTTTCTGGGTTTTCGTTCTCGACGTTGAGAGGATTTTCCCTTTTGGAGATTTGGAGATTTTTTGACCGAAGAATTATGATGCGGCGGCAGCAGCGGCGGAATTCGCAATCGAGTGTTTTCTACGAGCTTTCTTCTCTTGCCATGAATATTCTCCGATCGCCTCCGTCGTCAATCCCGTTTGCCGATCACTCGCCGGTGGTGCCGACGCAGATGACCCCGGCGCGGTTTGCGTCGCTTCTTCTAGGGATGTCTCTGGCTCTGATGCTCTGTGGATCGGTTACGTTCTTCATCGGCTTCATGATGATGCCTTGGGTTATTGGATTGGTTATGTTTTTCTTTGCCGCCGCCGTTGTTTCGAGCCTCTTCATGATCGGACGTTCGATTTTATACTACGTTACGGCTCAGCCTGCGCCCAGAAAGGACATCCCAGGGAGCAAACTTCTGTTGGAGGTGGGGACGTTGCTCCATTTCATTTCCTCCTCTTGGTATCCCATAGGCCATAGCCATACCTTTAGAGCATTACTGAATTCTCAAAGATCGCGAGCTGGCCTCGTCCCTTCTTCGTTGAAGGTTTATGTTGCCTTGCTCGGGTCCGGGATGGGGAAGGCTTTAGCAAAAAATGCCTAG

Coding sequence (CDS)

ATGATGCGGCGGCAGCAGCGGCGGAATTCGCAATCGAGTGTTTTCTACGAGCTTTCTTCTCTTGCCATGAATATTCTCCGATCGCCTCCGTCGTCAATCCCGTTTGCCGATCACTCGCCGGTGGTGCCGACGCAGATGACCCCGGCGCGGTTTGCGTCGCTTCTTCTAGGGATGTCTCTGGCTCTGATGCTCTGTGGATCGGTTACGTTCTTCATCGGCTTCATGATGATGCCTTGGGTTATTGGATTGGTTATGTTTTTCTTTGCCGCCGCCGTTGTTTCGAGCCTCTTCATGATCGGACGTTCGATTTTATACTACGTTACGGCTCAGCCTGCGCCCAGAAAGGACATCCCAGGGAGCAAACTTCTGTTGGAGGTGGGGACGTTGCTCCATTTCATTTCCTCCTCTTGGTATCCCATAGGCCATAGCCATACCTTTAGAGCATTACTGAATTCTCAAAGATCGCGAGCTGGCCTCGTCCCTTCTTCGTTGAAGGTTTATGTTGCCTTGCTCGGGTCCGGGATGGGGAAGGCTTTAGCAAAAAATGCCTAG

Protein sequence

MMRRQQRRNSQSSVFYELSSLAMNILRSPPSSIPFADHSPVVPTQMTPARFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFAAAVVSSLFMIGRSILYYVTAQPAPRKDIPGSKLLLEVGTLLHFISSSWYPIGHSHTFRALLNSQRSRAGLVPSSLKVYVALLGSGMGKALAKNA

Homology

[Close]

BLAST of CmaCh06G016860 vs. TrEMBL
Match: A0A0A0KW01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011660 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.3e-38
Identity = 96/133 (72.18%), Postives = 104/133 (78.20%), Query Frame = 1


Query: 1   MMRRQQRRNSQSSVFYELSSLAMNILRSPPSSIPFADHSPVV----------PTQMTPAR 60
           MM+R QR   +SSVFYELSSL MNILRSPP SIPF DHSPVV          P Q+TPA 
Sbjct: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFAAAVVSSLFMIGRSILYYVTAQ 120
           FASLLLG+SLALMLCGSVTFFIGFMMMPWVIGL+MFF+ AAVVS L MIGRSI+ Y TA 
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATA- 120

Query: 121 PAPRKDIPGSKLL 124
             PRKDIP  KL+
Sbjct: 121 -PPRKDIPAWKLM 131

[Close]

BLAST of CmaCh06G016860 vs. TrEMBL
Match: M5XFV1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013147mg PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-33
Identity = 82/137 (59.85%), Postives = 106/137 (77.37%), Query Frame = 1


Query: 1   MMRRQQRRNSQSSVFYELSSLAMNILRSPPSSIPFADHSPVVP--------------TQM 60
           MMRRQ +++ QS VFYELS+L +N+LRSPP+ I F+DHSPVVP              TQ+
Sbjct: 1   MMRRQDQQDQQSRVFYELSALVLNLLRSPPTPIQFSDHSPVVPSSSPSSSRRPPAAATQI 60

Query: 61  TPARFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFAAAVVSSLFMIGRSILYY 120
           +PA FASL+LG+S+ALMLCGSVTFFIGF++MPWV+GLVM F+ A +VSSL ++G+SIL Y
Sbjct: 61  SPAGFASLMLGISMALMLCGSVTFFIGFILMPWVLGLVMVFYVAGIVSSLSVLGKSILCY 120

Query: 121 VTAQPAPRKDIPGSKLL 124
            +A  +PRK+IP  KLL
Sbjct: 121 ASAPSSPRKEIPAWKLL 137

[Close]

BLAST of CmaCh06G016860 vs. TrEMBL
Match: A0A059B7F4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04620 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-32
Identity = 82/138 (59.42%), Postives = 100/138 (72.46%), Query Frame = 1


Query: 1   MMRRQQRRNSQSSVFYELSSLAMNILRSPPSSIPFADHSPVVPT---------------Q 60
           MMRRQQ+++ QS  FYELS+L +N+LRSPP+  PF D SP   +               Q
Sbjct: 1   MMRRQQQQDHQSRPFYELSALVLNLLRSPPAPPPFPDQSPAAASSSSRRSSAAVAAAAAQ 60

Query: 61  MTPARFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFAAAVVSSLFMIGRSILY 120
           +TPA FASL+LG+SLALMLCGSVTFFIGFM+MPWV+GLVMF + A +VSSL ++GRSIL 
Sbjct: 61  ITPAGFASLMLGISLALMLCGSVTFFIGFMLMPWVLGLVMFLYVAGIVSSLSVLGRSILC 120

Query: 121 YVTAQPAPRKDIPGSKLL 124
           Y T  P PRK+IP  KLL
Sbjct: 121 YATGPPTPRKEIPSWKLL 138

[Close]

BLAST of CmaCh06G016860 vs. TrEMBL
Match: A0A164THQ7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024672 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-31
Identity = 76/119 (63.87%), Postives = 96/119 (80.67%), Query Frame = 1


Query: 7   RRNSQSSVFYELSSLAMNILRSPPSSIPFADHSPVVPT-----QMTPARFASLLLGMSLA 66
           R++ QS VF+ELS+L +NILRSPP+ I F+DHSP  P      Q+TPA FASLLLG+SLA
Sbjct: 4   RQDQQSRVFHELSALILNILRSPPTPIHFSDHSPASPRRPSLPQLTPAGFASLLLGISLA 63

Query: 67  LMLCGSVTFFIGFMMMPWVIGLVMFFFAAAVVSSLFMIGRSILYYVTAQPAPRKDIPGS 121
           +MLCGSVTFFIGF++MPWVIGLV+ F+   +VSSL MIGR+IL Y  + P+PRKD+PG+
Sbjct: 64  MMLCGSVTFFIGFLLMPWVIGLVLVFYFVGIVSSLSMIGRAILCYTLSPPSPRKDVPGT 122

[Close]

BLAST of CmaCh06G016860 vs. TrEMBL
Match: W9QTR9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017445 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.3e-31
Identity = 83/132 (62.88%), Postives = 98/132 (74.24%), Query Frame = 1


Query: 1   MMRRQQRRNSQSSVFYELSSLAMNILRSPPSSIPFADHSPVVPT------------QMTP 60
           MMRRQQ  + QS V YELSSL +NILRSPPS IPF+DHS   P             Q++P
Sbjct: 1   MMRRQQ--DQQSGVLYELSSLVLNILRSPPSPIPFSDHSLPAPAPASVQSSRRSLQQISP 60

Query: 61  ARFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFAAAVVSSLFMIGRSILYYVT 120
           A FASLLLG+SLALMLCGSVTFFIGF++MPWV+GLVM F+ A +VSSL M+GRS+L Y T
Sbjct: 61  AGFASLLLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGIVSSLSMLGRSLLCYAT 120

[Close]

BLAST of CmaCh06G016860 vs. TAIR10
Match: AT1G27290.1 (AT1G27290.1 unknown protein)

HSP 1 Score: 119.4 bits (298), Expect = 2.3e-27
Identity = 71/142 (50.00%), Postives = 93/142 (65.49%), Query Frame = 1


Query: 2   MRRQQRRNSQSSVFYELSSLAMNILRSPPSSIPFADHSPVVPTQM--------------- 61
           M R+QR   QS VFY+LSSL +N+LRSPP  I   DH P  P ++               
Sbjct: 1   MMRRQRDEQQSRVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSSPS 60

Query: 62  ----TPARFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFAAAVVSSLFMIGRS 121
               +P+ FASLLLG+S+ALMLCGSVTFFIGF++MPWV+ L++ F+ A +VS++ M+GRS
Sbjct: 61  LAHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISMVGRS 120

Query: 122 ILYYVTAQPAPR-KDIPGSKLL 124
           IL YV   P+P  K+I   KLL
Sbjct: 121 ILCYVLTPPSPSGKEISEWKLL 142

[Close]

BLAST of CmaCh06G016860 vs. NCBI nr
Match: gi|659108162|ref|XP_008454049.1| (PREDICTED: uncharacterized protein LOC103494590 isoform X1 [Cucumis melo])

HSP 1 Score: 170.2 bits (430), Expect = 3.3e-39
Identity = 98/134 (73.13%), Postives = 108/134 (80.60%), Query Frame = 1


Query: 1   MMRRQQRRNSQSSVFYELSSLAMNILRSPPSSIPFADHSPVV----------PTQMTPAR 60
           MM+RQQR   +SSVFYELSSL MNILR+PPSSIPF+DHSPVV          P Q+TPA 
Sbjct: 1   MMQRQQRDGGESSVFYELSSLVMNILRTPPSSIPFSDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFAAAVVSSLFMIGRSILYYVTAQ 120
           FASLLLG+SLALMLCGSVTFFIGFMMMPWVIGLVMFF+ AAVVS L MIGRSI+ Y TA 
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVVSCLSMIGRSIICYATA- 120

Query: 121 PAPRKDIPGSKLLL 125
             PRKDIPG + L+
Sbjct: 121 -PPRKDIPGPRSLI 132

[Close]

BLAST of CmaCh06G016860 vs. NCBI nr
Match: gi|659108164|ref|XP_008454051.1| (PREDICTED: uncharacterized protein LOC103494590 isoform X2 [Cucumis melo])

HSP 1 Score: 169.1 bits (427), Expect = 7.2e-39
Identity = 98/133 (73.68%), Postives = 107/133 (80.45%), Query Frame = 1


Query: 1   MMRRQQRRNSQSSVFYELSSLAMNILRSPPSSIPFADHSPVV----------PTQMTPAR 60
           MM+RQQR   +SSVFYELSSL MNILR+PPSSIPF+DHSPVV          P Q+TPA 
Sbjct: 1   MMQRQQRDGGESSVFYELSSLVMNILRTPPSSIPFSDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFAAAVVSSLFMIGRSILYYVTAQ 120
           FASLLLG+SLALMLCGSVTFFIGFMMMPWVIGLVMFF+ AAVVS L MIGRSI+ Y TA 
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVVSCLSMIGRSIICYATA- 120

Query: 121 PAPRKDIPGSKLL 124
             PRKDIP  KL+
Sbjct: 121 -PPRKDIPAWKLM 131

[Close]

BLAST of CmaCh06G016860 vs. NCBI nr
Match: gi|778689898|ref|XP_004152133.2| (PREDICTED: uncharacterized protein LOC101218967 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 1.0e-37
Identity = 96/133 (72.18%), Postives = 104/133 (78.20%), Query Frame = 1


Query: 1   MMRRQQRRNSQSSVFYELSSLAMNILRSPPSSIPFADHSPVV----------PTQMTPAR 60
           MM+R QR   +SSVFYELSSL MNILRSPP SIPF DHSPVV          P Q+TPA 
Sbjct: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFAAAVVSSLFMIGRSILYYVTAQ 120
           FASLLLG+SLALMLCGSVTFFIGFMMMPWVIGL+MFF+ AAVVS L MIGRSI+ Y TA 
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATA- 120

Query: 121 PAPRKDIPGSKLL 124
             PRKDIP  KL+
Sbjct: 121 -PPRKDIPAWKLM 131

[Close]

BLAST of CmaCh06G016860 vs. NCBI nr
Match: gi|1009152850|ref|XP_015894320.1| (PREDICTED: uncharacterized protein LOC107428312 [Ziziphus jujuba])

HSP 1 Score: 153.3 bits (386), Expect = 4.1e-34
Identity = 87/135 (64.44%), Postives = 103/135 (76.30%), Query Frame = 1


Query: 1   MMRRQQRRNSQSSVFYELSSLAMNILRSPPSSIPFADHSPVVP------------TQMTP 60
           MMRRQQ  + QS VFYELS+L +NILRSPPS IPF+DHSPV P             Q++P
Sbjct: 1   MMRRQQ--DQQSRVFYELSALVLNILRSPPSPIPFSDHSPVTPPPPVSSTRRSPAAQISP 60

Query: 61  ARFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFAAAVVSSLFMIGRSILYYVT 120
           A FASLLLG+SLALMLCGSVTFFIGF++MPWV+GLVM F+ A ++S+L M+GRSIL Y T
Sbjct: 61  AGFASLLLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGMISALSMLGRSILCYAT 120

Query: 121 AQPAPRKDIPGSKLL 124
           A   PRK+IP  KLL
Sbjct: 121 APSTPRKEIPAWKLL 133

[Close]

BLAST of CmaCh06G016860 vs. NCBI nr
Match: gi|596205668|ref|XP_007223778.1| (hypothetical protein PRUPE_ppa013147mg [Prunus persica])

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-33
Identity = 82/137 (59.85%), Postives = 106/137 (77.37%), Query Frame = 1


Query: 1   MMRRQQRRNSQSSVFYELSSLAMNILRSPPSSIPFADHSPVVP--------------TQM 60
           MMRRQ +++ QS VFYELS+L +N+LRSPP+ I F+DHSPVVP              TQ+
Sbjct: 1   MMRRQDQQDQQSRVFYELSALVLNLLRSPPTPIQFSDHSPVVPSSSPSSSRRPPAAATQI 60

Query: 61  TPARFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFAAAVVSSLFMIGRSILYY 120
           +PA FASL+LG+S+ALMLCGSVTFFIGF++MPWV+GLVM F+ A +VSSL ++G+SIL Y
Sbjct: 61  SPAGFASLMLGISMALMLCGSVTFFIGFILMPWVLGLVMVFYVAGIVSSLSVLGKSILCY 120

Query: 121 VTAQPAPRKDIPGSKLL 124
            +A  +PRK+IP  KLL
Sbjct: 121 ASAPSSPRKEIPAWKLL 137

The following BLAST results are available for this feature:

BLAST of CmaCh06G016860 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh06G016860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW01_CUCSA	7.3e-38	72.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011660 PE=4 SV=1	[more]
M5XFV1_PRUPE	1.1e-33	59.85	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013147mg PE=4 SV=1	[more]
A0A059B7F4_EUCGR	2.1e-32	59.42	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04620 PE=4 SV=1	[more]
A0A164THQ7_DAUCA	1.7e-31	63.87	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024672 PE=4 SV=1	[more]
W9QTR9_9ROSA	2.3e-31	62.88	Uncharacterized protein OS=Morus notabilis GN=L484_017445 PE=4 SV=1	[more]

BLAST of CmaCh06G016860 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27290.1	2.3e-27	50.00	unknown protein	[more]

BLAST of CmaCh06G016860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659108162\|ref\|XP_008454049.1\|	3.3e-39	73.13	PREDICTED: uncharacterized protein LOC103494590 isoform X1 [Cucumis melo]	[more]
gi\|659108164\|ref\|XP_008454051.1\|	7.2e-39	73.68	PREDICTED: uncharacterized protein LOC103494590 isoform X2 [Cucumis melo]	[more]
gi\|778689898\|ref\|XP_004152133.2\|	1.0e-37	72.18	PREDICTED: uncharacterized protein LOC101218967 [Cucumis sativus]	[more]
gi\|1009152850\|ref\|XP_015894320.1\|	4.1e-34	64.44	PREDICTED: uncharacterized protein LOC107428312 [Ziziphus jujuba]	[more]
gi\|596205668\|ref\|XP_007223778.1\|	1.6e-33	59.85	hypothetical protein PRUPE_ppa013147mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G016860.1	CmaCh06G016860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34781	FAMILY NOT NAMED	coord: 1..123 score: 5.5
None	No IPR available	PANTHER	PTHR34781:SF2	SUBFAMILY NOT NAMED	coord: 1..123 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh06G016860	Cucsa.095300	Cucumber (Gy14) v1	cgycmaB0205
CmaCh06G016860	Cla010893	Watermelon (97103) v1	cmawmB794
CmaCh06G016860	Csa4G011660	Cucumber (Chinese Long) v2	cmacuB835
CmaCh06G016860	MELO3C017764	Melon (DHL92) v3.5.1	cmameB774
CmaCh06G016860	ClCG07G015190	Watermelon (Charleston Gray)	cmawcgB747
CmaCh06G016860	CSPI04G02830	Wild cucumber (PI 183967)	cmacpiB850
CmaCh06G016860	CmoCh06G016780	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G016860	CmoCh14G014720	Cucurbita moschata (Rifu)	cmacmoB797
CmaCh06G016860	Cp4.1LG03g13080	Cucurbita pepo (Zucchini)	cmacpeB837
CmaCh06G016860	MELO3C017764.2	Melon (DHL92) v3.6.1	cmamedB875
CmaCh06G016860	CsaV3_4G002780	Cucumber (Chinese Long) v3	cmacucB0987
CmaCh06G016860	Cla97C07G142170	Watermelon (97103) v2	cmawmbB867
CmaCh06G016860	Bhi01G002865	Wax gourd	cmawgoB1018
CmaCh06G016860	CsGy4G002700	Cucumber (Gy14) v2	cgybcmaB560
CmaCh06G016860	Carg15446	Silver-seed gourd	carcmaB0974
CmaCh06G016860	Carg06586	Silver-seed gourd	carcmaB0158

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh06G016860	CmaCh14G014360	Cucurbita maxima (Rimu)	cmacmaB284

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh06G016860	Cucurbita pepo (Zucchini)	cmacpeB853
CmaCh06G016860	Bottle gourd (USVL1VR-Ls)	cmalsiB773