Carg15446 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15446
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transmembrane protein
Location	Cucurbita_argyrosperma_scaffold_069 : 218265 .. 220973 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATCCGAACTGAAATTCTAGGAAATTGTGAACGAGAGCTTTCTGGGTGAACGGAAAAGGGTTCTTTAGTTCAATATTTGAGTTGGGTTTTCACCGTTCTATGTGTTTGTGTGTGTGTGTGAATGCATTTAGTTGTGTGTTGAATTCTTAAGAAACAAACAAAAGTTTTGCCTATCAGACTTATCCACTCGCTGTTGTGGTTGCTGTTGAGGGGTTTTAGTCTTGCCAATCCAATCACGGACCCCCCCAGTTCCATAAAGTTCCTTAGATTTATCGATTTCCCTTGAATCATTCAACAAAAGCGTTTTTGGGTTTTCGTTCTCGACGTTGAGAGGATTTTCCCTTTTGGAGATTTGGAGATTTTTTGACCGAAGAATTATGATGCGGCGGCAGCAGCAGCGGAATTCCCAATCGAGTGTTTTCTACGAGCTTTCTTCTCTTGCCATGAATATTCTCCGATCGCCTCCGTCGTCAATCCCGTTTTCCGATCACTCACCGGTGGTGCCGACGCAGATGACCCCGGCCGGGTTTGCGTCGCTTCTTCTAGGGATGTCTCTGGCTCTGATGCTCTGTGGATCGGTTACGTTCTTCATCGGCTTCATGATGATGCCTTGGGTTATTGGATTGGTTATGTTTTTCTTTGTCGCCGCCGTTGTTTCGAGCCTCTTCATGATCGGACGTTCGATCTTATACTACGTTACGGCTCAGCCTGCGCCCAGAAAGGACATCCCAGGTACGCCGATTCGTTTAGATGATTTTCTCACGATTATTGATTTCTCTTTGATGCGATTTTCTTGTTTCTGAATGATATCTTATTCATTAGTTTCAGATCTTAGATCTAAATTTGTGTTCAATTTATATGTTGAATCTGTTCAAAGAAAATTGCCCACATGATTCAAATTCTACTTGTCTTTTAGGACTCTGTTTTTTTCTTTTAAGAATCAACGATGGGATGGCTTTTAGGTCCAAATTTCTGAAGATAAACCATGATTGTTCATTGTATTCAAGAACAACCCATTTGGGGAAATAAGATTTTCTCTTCCAAAACAGAGAGAAGAAAGCTTCCAAACGACCTCTAACATTGAAACCGTACAATCACAGCGTTGAAACCAATTTTGTTTCTTTTGAAGGGTCGGTTCAGGCTGATCTTTCCAAAAGTGTCTATTTCACATTAGCTTTGTCGTGCAAGGCACGATGACATAGACGAAATATCTCACATTTTTCTTCTTGATAAACAGGACGTTCAGGTCCCGTTCCTTGCTTTTGTGCTCACCAGGCTTTGACAAACAGCGATGCTCACCAGGCTTTAAAATTACCTCCAGACGTCCCAATCCTTTACTATTATTAAGCCCACCAAACTTGTCAAGGCTTTATTTACCTTATACTTTACTATTAGGCCGCCCAAACTTGTCAAGGCGTTGGAAAAGGTCTTTGTGAGGATGTCAACCTCTTTTAGGCCCACAAGCTTGTCAAGCCATGGGTTAAAAAGACGGTGTGTGGATGCCAACCTCTATTTGGCTTATACTTTACTGTTAGGGCCACCAAACTTGTTTGCCTTGTAGGCGTGGAGTTCTATTTTCATTCACACTACACAACTTAGCTTGTGAACCCATCAATATGCTCGAGCTGCCTATGCTCTACAACTTCTGATGAGGGTCGAGTTCAGGGAGTTTTGGTGTAATACCCCAAGCACACCGTTAACGGATATTATCCTCTTTGGGCTTTTCCTTCTGGGCTTTCCCTTAAGGTTTTAAAACGCATCTGCTAGGAAGAGGTTTCCACACCCTCATAGAGGGTGTTTTGTTTCACTGTCCAACCTACGTGGGATCTCACATTGGAGTTGGTTGCTCTAGTTTGAAATTGAGTTGAAAAAATGTATATGGCTGTTCTTCGTACTCGAGAATGGTTCGTTGTATCCACATCCTTGGACATGTATATATACTAGAATCTTTAGAGAATGTCAACTTTGGTACCAATAGAAACAGGAAAAAGTCTCTTCTGGTCTGCAACTCTGAGTTTTTTGGGCTGTTAATACTCCTAAATGGAGTCTAATTGTCTTCTTTGTTACCAACGTTTCTTGCTCGATCTTGAAGTAAAAGCTGGATGATTCAATGCTGCATTTTATTACTTGTCTCTCTTACCATAAGCACTTCATTGGTTAATACTTATAAATGCCTTGCATTTCATCATTAGTAGAGTGATAGGACTAAGAAGATTAGCTAACCTCTCAATGACCTCCCTTCCGAATTAGTTGTTTTAATCAACCGCTATCTCGTCTTTCGCTCGTGTTTTTTTGTTTGTAACAATCAACACATGTACTTTTGTGGCTGCAGCTTGGAAGTTAATGTGAAGAGGACGCTGATGTTTGAAACTAGCAATTATTGTTTATGGTGGTTGTGGAGGGCTCTAATATCCTCGGTGCTGTGCTGCGCTGCCCGTTGGCTTTCTTCTCGACTCGACTCGGCTGAGAAGAAGTGTTTGTTAATATTATATTTCAAACTGGATCCTGTTCATATTGTTTCTGTTAAATTGAAGGGAGCAAACTGTTGGAGGTGGGGACGTTGCTCCATTTCATTTCCTCCTCTTGGTGTATCCCATAGGCCATAGCCATACCTTTAGAGGTAAATTTGTTTTGATTATAGAAGAAGTAATTAGCAGCTACTGAATTCTCAAAGATCTCGAGCTAGCCTCGCCCCTTCTTCGTTGAAG

mRNA sequence

CAATCCGAACTGAAATTCTAGGAAATTGTGAACGAGAGCTTTCTGGGTGAACGGAAAAGGGTTCTTTAGTTCAATATTTGAGTTGGGTTTTCACCGTTCTATGTGTTTGTGTGTGTGTGTGAATGCATTTAGTTGTGTGTTGAATTCTTAAGAAACAAACAAAAGTTTTGCCTATCAGACTTATCCACTCGCTGTTGTGGTTGCTGTTGAGGGGTTTTAGTCTTGCCAATCCAATCACGGACCCCCCCAGTTCCATAAAGTTCCTTAGATTTATCGATTTCCCTTGAATCATTCAACAAAAGCGTTTTTGGGTTTTCGTTCTCGACGTTGAGAGGATTTTCCCTTTTGGAGATTTGGAGATTTTTTGACCGAAGAATTATGATGCGGCGGCAGCAGCAGCGGAATTCCCAATCGAGTGTTTTCTACGAGCTTTCTTCTCTTGCCATGAATATTCTCCGATCGCCTCCGTCGTCAATCCCGTTTTCCGATCACTCACCGGTGGTGCCGACGCAGATGACCCCGGCCGGGTTTGCGTCGCTTCTTCTAGGGATGTCTCTGGCTCTGATGCTCTGTGGATCGGTTACGTTCTTCATCGGCTTCATGATGATGCCTTGGGTTATTGGATTGGTTATGTTTTTCTTTGTCGCCGCCGTTGTTTCGAGCCTCTTCATGATCGGACGTTCGATCTTATACTACGTTACGGCTCAGCCTGCGCCCAGAAAGGACATCCCAGGACGTTCAGGTCCCGTTCCTTGCTTTTGTGCTCACCAGGCTTTGACAAACAGCGATGCTCACCAGGCTTTAAAATTACCTCCAGACGTCCCAATCCTTTACTATTATTAAGCCCACCAAACTTGTCAAGGCTTTATTTACCTTATACTTTACTATTAGGCCGCCCAAACTTGTCAAGGCGTTGGAAAAGGTCTTTGTGAGGATGTCAACCTCTTTTAGGCCCACAAGCTTGTCAAGCCATGGGTTAAAAAGACGGTGTGTGGATGCCAACCTCTATTTGGCTTATACTTTACTGTTAGGGCCACCAAACTTGTTTGCCTTGTAGGCGTGGAGTTCTATTTTCATTCACACTACACAACTTAGCTTGTGAACCCATCAATATGCTCGAGCTGCCTATGCTCTACAACTTCTGATGAGGGTCGAGTTCAGGGAGTTTTGGTGTAATACCCCAAGCACACCGTTAACGGATATTATCCTCTTTGGGCTTTTCCTTCTGGGCTTTCCCTTAAGGTTTTAAAACGCATCTGCTAGGAAGAGGTTTCCACACCCTCATAGAGGGTGTTTTGTTTCACTGTCCAACCTACGTGGGATCTCACATTGGAGTTGGTTGCTCTAGTTTGAAATTGAGTTGAAAAAATGTATATGGCTGTTCTTCGTACTCGAGAATGGTTCGTTGTATCCACATCCTTGGACATGTATATATACTAGAATCTTTAGAGAATGTCAACTTTGGTACCAATAGAAACAGGAAAAAGTCTCTTCTGGTCTGCAACTCTGAGTTTTTTGGGCTGTTAATACTCCTAAATGGAGTCTAATTGTCTTCTTTGTTACCAACGTTTCTTGCTCGATCTTGAAGTAAAAGCTGGATGATTCAATGCTGCATTTTATTACTTGTCTCTCTTACCATAAGCACTTCATTGGTTAATACTTATAAATGCCTTGCATTTCATCATTAGTAGAGTGATAGGACTAAGAAGATTAGCTAACCTCTCAATGACCTCCCTTCCGAATTAGTTGTTTTAATCAACCGCTATCTCGTCTTTCGCTCGTGTTTTTTTGTTTGTAACAATCAACACATGTACTTTTGTGGCTGCAGCTTGGAAGTTAATGTGAAGAGGACGCTGATGTTTGAAACTAGCAATTATTGTTTATGGTGGTTGTGGAGGGCTCTAATATCCTCGGTGCTGTGCTGCGCTGCCCGTTGGCTTTCTTCTCGACTCGACTCGGCTGAGAAGAAGTGTTTGTTAATATTATATTTCAAACTGGATCCTGTTCATATTGTTTCTGTTAAATTGAAGGGAGCAAACTGTTGGAGGTGGGGACGTTGCTCCATTTCATTTCCTCCTCTTGGTGTATCCCATAGGCCATAGCCATACCTTTAGAGGTAAATTTGTTTTGATTATAGAAGAAGTAATTAGCAGCTACTGAATTCTCAAAGATCTCGAGCTAGCCTCGCCCCTTCTTCGTTGAAG

Coding sequence (CDS)

ATGATGCGGCGGCAGCAGCAGCGGAATTCCCAATCGAGTGTTTTCTACGAGCTTTCTTCTCTTGCCATGAATATTCTCCGATCGCCTCCGTCGTCAATCCCGTTTTCCGATCACTCACCGGTGGTGCCGACGCAGATGACCCCGGCCGGGTTTGCGTCGCTTCTTCTAGGGATGTCTCTGGCTCTGATGCTCTGTGGATCGGTTACGTTCTTCATCGGCTTCATGATGATGCCTTGGGTTATTGGATTGGTTATGTTTTTCTTTGTCGCCGCCGTTGTTTCGAGCCTCTTCATGATCGGACGTTCGATCTTATACTACGTTACGGCTCAGCCTGCGCCCAGAAAGGACATCCCAGGACGTTCAGGTCCCGTTCCTTGCTTTTGTGCTCACCAGGCTTTGACAAACAGCGATGCTCACCAGGCTTTAAAATTACCTCCAGACGTCCCAATCCTTTACTATTATTAA

Protein sequence

MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIGRSILYYVTAQPAPRKDIPGRSGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY

Homology

[Close]

BLAST of Carg15446 vs. NCBI nr
Match: XP_022972186.1 (uncharacterized protein LOC111470796 [Cucurbita maxima])

HSP 1 Score: 290.8 bits (743), Expect = 2.7e-75
Identity = 149/154 (96.75%), Postives = 152/154 (98.70%), Query Frame = 0


Query: 1   MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSL 60
           MMRRQQ+RNSQSSVFYELSSLAMNILRSPPSSIPF+DHSPVVPTQMTPA FASLLLGMSL
Sbjct: 1   MMRRQQRRNSQSSVFYELSSLAMNILRSPPSSIPFADHSPVVPTQMTPARFASLLLGMSL 60

Query: 61  ALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIGRSILYYVTAQPAPRKDIPGR 120
           ALMLCGSVTFFIGFMMMPWVIGLVMFFF AAVVSSLFMIGRSILYYVTAQPAPRKDIPGR
Sbjct: 61  ALMLCGSVTFFIGFMMMPWVIGLVMFFFAAAVVSSLFMIGRSILYYVTAQPAPRKDIPGR 120

Query: 121 SGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY 155
           SGP+PCFCAHQALTNSDAHQALKLPPDVPILYYY
Sbjct: 121 SGPIPCFCAHQALTNSDAHQALKLPPDVPILYYY 154

[Close]

BLAST of Carg15446 vs. NCBI nr
Match: XP_023538787.1 (uncharacterized protein LOC111799610 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.0 bits (728), Expect = 1.5e-73
Identity = 149/154 (96.75%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSL 60
           MMRR  QRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSL
Sbjct: 1   MMRR--QRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSL 60

Query: 61  ALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIGRSILYYVTAQPAPRKDIPGR 120
           ALMLCGSVTFFIGFMMMPWVIGLVMFFFVAA VSSLFMIGRSILYYVTAQPAPRKDIPGR
Sbjct: 61  ALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAAVSSLFMIGRSILYYVTAQPAPRKDIPGR 120

Query: 121 SGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY 155
           SGP+PCFCAHQALTNSDA QALKLPPDVPILYYY
Sbjct: 121 SGPIPCFCAHQALTNSDARQALKLPPDVPILYYY 152

[Close]

BLAST of Carg15446 vs. NCBI nr
Match: XP_022932613.1 (uncharacterized protein LOC111439117 isoform X1 [Cucurbita moschata])

HSP 1 Score: 268.1 bits (684), Expect = 1.9e-68
Identity = 141/154 (91.56%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSL 60
           MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPV+PTQMTPAGFASLLLGMSL
Sbjct: 1   MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVLPTQMTPAGFASLLLGMSL 60

Query: 61  ALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIGRSILYYVTAQPAPRKDIPGR 120
           ALMLCGSVTFFIGFMMMPWVIGLVMFFFVAA+VSSLFMIGRSILYYVTAQP PRKDIPGR
Sbjct: 61  ALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAIVSSLFMIGRSILYYVTAQPEPRKDIPGR 120

Query: 121 SGPVPCFCAHQALTNSDAHQALKLPPDVPILYYY 155
           SGP+PCFC         AHQALKLPPDVPILYYY
Sbjct: 121 SGPIPCFC---------AHQALKLPPDVPILYYY 145

[Close]

BLAST of Carg15446 vs. NCBI nr
Match: XP_022932614.1 (uncharacterized protein LOC111439117 isoform X2 [Cucurbita moschata])

HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52
Identity = 115/118 (97.46%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSL 60
           MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPV+PTQMTPAGFASLLLGMSL
Sbjct: 1   MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVLPTQMTPAGFASLLLGMSL 60

Query: 61  ALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIGRSILYYVTAQPAPRKDIP 119
           ALMLCGSVTFFIGFMMMPWVIGLVMFFFVAA+VSSLFMIGRSILYYVTAQP PRKDIP
Sbjct: 61  ALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAIVSSLFMIGRSILYYVTAQPEPRKDIP 118

[Close]

BLAST of Carg15446 vs. NCBI nr
Match: XP_023538788.1 (uncharacterized protein LOC111799610 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.5 bits (532), Expect = 7.9e-51
Identity = 115/118 (97.46%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSL 60
           MMRR  QRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSL
Sbjct: 1   MMRR--QRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQMTPAGFASLLLGMSL 60

Query: 61  ALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIGRSILYYVTAQPAPRKDIP 119
           ALMLCGSVTFFIGFMMMPWVIGLVMFFFVAA VSSLFMIGRSILYYVTAQPAPRKDIP
Sbjct: 61  ALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAAVSSLFMIGRSILYYVTAQPAPRKDIP 116

[Close]

BLAST of Carg15446 vs. TAIR10
Match: AT1G27290.1 (unknown protein)

HSP 1 Score: 118.6 bits (296), Expect = 3.3e-27
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 0


Query: 2   MRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVPTQ---------------- 61
           M R+Q+   QS VFY+LSSL +N+LRSPP  I   DH P  P +                
Sbjct: 1   MMRRQRDEQQSRVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSSPS 60

Query: 62  ---MTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIGRS 114
              ++P+GFASLLLG+S+ALMLCGSVTFFIGF++MPWV+ L++ F+VA +VS++ M+GRS
Sbjct: 61  LAHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISMVGRS 120

[Close]

BLAST of Carg15446 vs. TrEMBL
Match: tr|A0A1S3BYH6|A0A1S3BYH6_CUCME (uncharacterized protein LOC103494590 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494590 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-39
Identity = 99/129 (76.74%), Postives = 107/129 (82.95%), Query Frame = 0


Query: 1   MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVV----------PTQMTPAG 60
           MM+RQQ+   +SSVFYELSSL MNILR+PPSSIPFSDHSPVV          P Q+TPAG
Sbjct: 1   MMQRQQRDGGESSVFYELSSLVMNILRTPPSSIPFSDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIGRSILYYVTAQ 120
           FASLLLG+SLALMLCGSVTFFIGFMMMPWVIGLVMFF+VAAVVS L MIGRSI+ Y TA 
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVVSCLSMIGRSIICYATA- 120

[Close]

BLAST of Carg15446 vs. TrEMBL
Match: tr|A0A1S3BX78|A0A1S3BX78_CUCME (uncharacterized protein LOC103494590 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494590 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 7.8e-39
Identity = 98/128 (76.56%), Postives = 106/128 (82.81%), Query Frame = 0


Query: 1   MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVV----------PTQMTPAG 60
           MM+RQQ+   +SSVFYELSSL MNILR+PPSSIPFSDHSPVV          P Q+TPAG
Sbjct: 1   MMQRQQRDGGESSVFYELSSLVMNILRTPPSSIPFSDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIGRSILYYVTAQ 119
           FASLLLG+SLALMLCGSVTFFIGFMMMPWVIGLVMFF+VAAVVS L MIGRSI+ Y TA 
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVVSCLSMIGRSIICYATA- 120

[Close]

BLAST of Carg15446 vs. TrEMBL
Match: tr|A0A0A0KW01|A0A0A0KW01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011660 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.5e-37
Identity = 95/128 (74.22%), Postives = 103/128 (80.47%), Query Frame = 0


Query: 1   MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVV----------PTQMTPAG 60
           MM+R Q+   +SSVFYELSSL MNILRSPP SIPF DHSPVV          P Q+TPAG
Sbjct: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIGRSILYYVTAQ 119
           FASLLLG+SLALMLCGSVTFFIGFMMMPWVIGL+MFF+VAAVVS L MIGRSI+ Y TA 
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATA- 120

[Close]

BLAST of Carg15446 vs. TrEMBL
Match: tr|A0A251R1S3|A0A251R1S3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G223700 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.3e-35
Identity = 84/134 (62.69%), Postives = 107/134 (79.85%), Query Frame = 0


Query: 1   MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPVVP--------------TQM 60
           MMRRQ Q++ QS VFYELS+L +N+LRSPP+ I FSDHSPVVP              TQ+
Sbjct: 1   MMRRQDQQDQQSRVFYELSALVLNLLRSPPTPIQFSDHSPVVPSSXXXXXXXXXXXATQI 60

Query: 61  TPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIGRSILYY 120
           +PAGFASL+LG+S+ALMLCGSVTFFIGF++MPWV+GLVM F+VA +VSSL ++G+SIL Y
Sbjct: 61  SPAGFASLMLGISMALMLCGSVTFFIGFILMPWVLGLVMVFYVAGIVSSLSVLGKSILCY 120

[Close]

BLAST of Carg15446 vs. TrEMBL
Match: tr|A0A2N9HDZ5|A0A2N9HDZ5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38284 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.9e-35
Identity = 88/140 (62.86%), Postives = 105/140 (75.00%), Query Frame = 0


Query: 1   MMRRQQQRNSQSSVFYELSSLAMNILRSPPSSIPFSDHSPV------------------- 60
           MMRRQQ  + QS VFYELS+L +NILRSPPSS+PFSD SP                    
Sbjct: 1   MMRRQQ--DQQSRVFYELSALVLNILRSPPSSVPFSDQSPATXXXXXXXXXXXXXXXXXX 60

Query: 61  -VPTQMTPAGFASLLLGMSLALMLCGSVTFFIGFMMMPWVIGLVMFFFVAAVVSSLFMIG 120
              TQ++P GFASL+LG+SLALMLCGSVTFFIGF++MPWV+GLVM F+VA +VSSL M+G
Sbjct: 61  XATTQISPVGFASLMLGISLALMLCGSVTFFIGFLLMPWVLGLVMVFYVAGIVSSLSMLG 120

The following BLAST results are available for this feature:

BLAST of Carg15446 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022972186.1	2.7e-75	96.75	uncharacterized protein LOC111470796 [Cucurbita maxima]	[more]
XP_023538787.1	1.5e-73	96.75	uncharacterized protein LOC111799610 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022932613.1	1.9e-68	91.56	uncharacterized protein LOC111439117 isoform X1 [Cucurbita moschata]	[more]
XP_022932614.1	1.1e-52	97.46	uncharacterized protein LOC111439117 isoform X2 [Cucurbita moschata]	[more]
XP_023538788.1	7.9e-51	97.46	uncharacterized protein LOC111799610 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg15446 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27290.1	3.3e-27	51.15	unknown protein	[more]

BLAST of Carg15446 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg15446 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BYH6\|A0A1S3BYH6_CUCME	1.6e-39	76.74	uncharacterized protein LOC103494590 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BX78\|A0A1S3BX78_CUCME	7.8e-39	76.56	uncharacterized protein LOC103494590 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KW01\|A0A0A0KW01_CUCSA	2.5e-37	74.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011660 PE=4 SV=1	[more]
tr\|A0A251R1S3\|A0A251R1S3_PRUPE	5.3e-35	62.69	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G223700 PE=4 SV=1	[more]
tr\|A0A2N9HDZ5\|A0A2N9HDZ5_FAGSY	6.9e-35	62.86	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38284 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15446-RA	Carg15446-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34781	FAMILY NOT NAMED	coord: 2..118
None	No IPR available	PANTHER	PTHR34781:SF2	SUBFAMILY NOT NAMED	coord: 2..118

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15446	Cla010893	Watermelon (97103) v1	carwmB0690
Carg15446	Csa4G011660	Cucumber (Chinese Long) v2	carcuB0716
Carg15446	MELO3C017764	Melon (DHL92) v3.5.1	carmeB0694
Carg15446	ClCG07G015190	Watermelon (Charleston Gray)	carwcgB0670
Carg15446	CSPI04G02830	Wild cucumber (PI 183967)	carcpiB0730
Carg15446	Cucsa.095300	Cucumber (Gy14) v1	carcgyB0775
Carg15446	CmaCh06G016860	Cucurbita maxima (Rimu)	carcmaB0974
Carg15446	CmaCh14G014360	Cucurbita maxima (Rimu)	carcmaB0972
Carg15446	CmoCh14G014720	Cucurbita moschata (Rifu)	carcmoB0946
Carg15446	CmoCh06G016780	Cucurbita moschata (Rifu)	carcmoB0947
Carg15446	Lsi07G003400	Bottle gourd (USVL1VR-Ls)	carlsiB635
Carg15446	Cp4.1LG03g13080	Cucurbita pepo (Zucchini)	carcpeB0973
Carg15446	CsGy4G002700	Cucumber (Gy14) v2	carcgybB0693
Carg15446	MELO3C017764.2	Melon (DHL92) v3.6.1	carmedB0707
Carg15446	CsaV3_4G002780	Cucumber (Chinese Long) v3	carcucB0733
Carg15446	Cla97C07G142170	Watermelon (97103) v2	carwmbB0722
Carg15446	Bhi01G002865	Wax gourd	carwgoB0814

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15446	Carg06586	Silver-seed gourd	carcarB142

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15446	Silver-seed gourd	carcarB013
Carg15446	Cucumber (Gy14) v1	carcgyB0778
Carg15446	Cucurbita maxima (Rimu)	carcmaB0973
Carg15446	Cucurbita pepo (Zucchini)	carcpeB0974
Carg15446	Wild cucumber (PI 183967)	carcpiB0731
Carg15446	Cucumber (Chinese Long) v3	carcucB0734
Carg15446	Bottle gourd (USVL1VR-Ls)	carlsiB631
Carg15446	Melon (DHL92) v3.5.1	carmeB0691
Carg15446	Melon (DHL92) v3.6.1	carmedB0704
Carg15446	Watermelon (Charleston Gray)	carwcgB0669
Carg15446	Watermelon (97103) v1	carwmB0693
Carg15446	Watermelon (97103) v2	carwmbB0721
Carg15446	Wax gourd	carwgoB0813