CmaCh06G016450 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G016450
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCalcium-binding protein
LocationCma_Chr06 : 10219737 .. 10220189 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCGACGGAACTACGAAGAGTATTCCAGATGTTCGATCGCAATGGCGACGGGCAAATCACGAAGAAGGAACTAAACGACTCGTTGGAGAATTTGGGGATTTTCATCCCGGACAAAGATCTGACTCAAATGATCGAGAAAATTGACGTTAATAACGATGGATACGTGGACATTGACGAGTTCGGAGAGCTGTACCAGTCGATTATGAACGAGAAAGACGAGGAGGAGGACATGAGAGAAGCGTTCAACGTCTTTGACCAGAACGGCGATGGATTCATCACCGTCGAGGAATTGAGGTCAGTTCTAGCTTCCTTGGGGCTTAAGCAAGGGAGAACTGTTGAGGATTGCAAGAAGATGATCATGAAGGTGGATGTCGATGGAGATGGAATGGTCAATTACAAGGAGTTCAAGCAAATGATGAAGGGAGGTGGATTTAGTGCATTAGGTTGA

mRNA sequence

ATGGATCCGACGGAACTACGAAGAGTATTCCAGATGTTCGATCGCAATGGCGACGGGCAAATCACGAAGAAGGAACTAAACGACTCGTTGGAGAATTTGGGGATTTTCATCCCGGACAAAGATCTGACTCAAATGATCGAGAAAATTGACGTTAATAACGATGGATACGTGGACATTGACGAGTTCGGAGAGCTGTACCAGTCGATTATGAACGAGAAAGACGAGGAGGAGGACATGAGAGAAGCGTTCAACGTCTTTGACCAGAACGGCGATGGATTCATCACCGTCGAGGAATTGAGGTCAGTTCTAGCTTCCTTGGGGCTTAAGCAAGGGAGAACTGTTGAGGATTGCAAGAAGATGATCATGAAGGTGGATGTCGATGGAGATGGAATGGTCAATTACAAGGAGTTCAAGCAAATGATGAAGGGAGGTGGATTTAGTGCATTAGGTTGA

Coding sequence (CDS)

ATGGATCCGACGGAACTACGAAGAGTATTCCAGATGTTCGATCGCAATGGCGACGGGCAAATCACGAAGAAGGAACTAAACGACTCGTTGGAGAATTTGGGGATTTTCATCCCGGACAAAGATCTGACTCAAATGATCGAGAAAATTGACGTTAATAACGATGGATACGTGGACATTGACGAGTTCGGAGAGCTGTACCAGTCGATTATGAACGAGAAAGACGAGGAGGAGGACATGAGAGAAGCGTTCAACGTCTTTGACCAGAACGGCGATGGATTCATCACCGTCGAGGAATTGAGGTCAGTTCTAGCTTCCTTGGGGCTTAAGCAAGGGAGAACTGTTGAGGATTGCAAGAAGATGATCATGAAGGTGGATGTCGATGGAGATGGAATGGTCAATTACAAGGAGTTCAAGCAAATGATGAAGGGAGGTGGATTTAGTGCATTAGGTTGA

Protein sequence

MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDIDEFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Homology
[Close]
BLAST of CmaCh06G016450 vs. Swiss-Prot
Match: CML3_ARATH (Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.9e-69
Identity = 129/150 (86.00%), Postives = 141/150 (94.00%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD  EL R+FQMFDRNGDG+ITK+ELNDSLENLGI+IPDKDL QMIEKID+N DGYVDI+
Sbjct: 1   MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIE 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ+IM E+DEEEDMREAFNVFDQN DGFITVEELRSVLASLGLKQGRT+EDCK+M
Sbjct: 61  EFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           I KVDVDGDGMVN+KEFKQMMKGGGF+ALG
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMKGGGFAALG 150

[Close]
BLAST of CmaCh06G016450 vs. Swiss-Prot
Match: CML7_ARATH (Calmodulin-like protein 7 OS=Arabidopsis thaliana GN=CML7 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.1e-64
Identity = 119/150 (79.33%), Postives = 142/150 (94.67%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTEL+RVFQMFD+NGDG IT KEL+++L +LGI+IPDK+LTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMNEKD-EEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKK 120
           EFGELY++IM+E+D EEEDM+EAFNVFDQNGDGFITV+EL++VL+SLGLKQG+T++DCKK
Sbjct: 61  EFGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKK 120

Query: 121 MIMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           MI KVDVDGDG VNYKEF+QMMKGGGF++L
Sbjct: 121 MIKKVDVDGDGRVNYKEFRQMMKGGGFNSL 150

[Close]
BLAST of CmaCh06G016450 vs. Swiss-Prot
Match: CML5_ARATH (Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2)

HSP 1 Score: 234.6 bits (597), Expect = 7.2e-61
Identity = 116/153 (75.82%), Postives = 136/153 (88.89%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           +DP+EL+RVFQMFD+NGDG+ITK+ELNDSLENLGI+IPDKDLTQMI KID N DG VDID
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 61  EFGELYQSIMNE-----KDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVE 120
           EF  LY SI++E     + EEEDM++AFNVFDQ+GDGFITVEEL+SV+ASLGLKQG+T++
Sbjct: 121 EFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLD 180

Query: 121 DCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSA 149
            CKKMIM+VD DGDG VNYKEF QMMKGGGFS+
Sbjct: 181 GCKKMIMQVDADGDGRVNYKEFLQMMKGGGFSS 213

[Close]
BLAST of CmaCh06G016450 vs. Swiss-Prot
Match: CML2_ARATH (Calmodulin-like protein 2 OS=Arabidopsis thaliana GN=CML2 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.5e-58
Identity = 109/149 (73.15%), Postives = 129/149 (86.58%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD  EL RVFQMFD+NGDG+I K EL D  +++GI +P+ ++ +MI K+DVN DG +DID
Sbjct: 1   MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ ++ EK+EEEDMREAF VFDQNGDGFIT EELRSVLAS+GLKQGRT+EDCKKM
Sbjct: 61  EFGSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           I KVDVDGDGMVN+KEFKQMM+GGGF+AL
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMRGGGFAAL 149

[Close]
BLAST of CmaCh06G016450 vs. Swiss-Prot
Match: CML4_ARATH (Calmodulin-like protein 4 OS=Arabidopsis thaliana GN=CML4 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.2e-55
Identity = 109/145 (75.17%), Postives = 126/145 (86.90%), Query Frame = 1 

Query: 3   PTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDIDEF 62
           P +L+RVFQMFD+NGDG+ITK+ELNDSLENLGIF+PDKDL QMI+K+D N DG VDI+EF
Sbjct: 49  PVDLKRVFQMFDKNGDGRITKEELNDSLENLGIFMPDKDLIQMIQKMDANGDGCVDINEF 108

Query: 63  GELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKMIM 122
             LY SI+ EK EE DMR+AFNVFDQ+GDGFITVEEL SV+ SLGLKQG+T+E CK+MIM
Sbjct: 109 ESLYGSIVEEK-EEGDMRDAFNVFDQDGDGFITVEELNSVMTSLGLKQGKTLECCKEMIM 168

Query: 123 KVDVDGDGMVNYKEFKQMMKGGGFS 148
           +VD DGDG VNYKEF QMMK G FS
Sbjct: 169 QVDEDGDGRVNYKEFLQMMKSGDFS 192

[Close]
BLAST of CmaCh06G016450 vs. TrEMBL
Match: D1MWZ5_CITLA (Calcium-binding EF-hand protein OS=Citrullus lanatus subsp. vulgaris GN=CitCaEFh PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.3e-74
Identity = 143/150 (95.33%), Postives = 148/150 (98.67%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDG+ITKKEL+DSLENLGIFIPDKDLTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]
BLAST of CmaCh06G016450 vs. TrEMBL
Match: Q9SCA1_LOTJA (Calcium-binding protein OS=Lotus japonicus GN=cbp1 PE=2 SV=3)

HSP 1 Score: 279.6 bits (714), Expect = 2.2e-72
Identity = 138/149 (92.62%), Postives = 147/149 (98.66%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTEL+RVFQMFDRNGDG+ITKKELNDSLENLGIFIPDK+LTQMIE+IDVN DG VDID
Sbjct: 81  MDPTELKRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKELTQMIERIDVNGDGCVDID 140

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEEDMREAFNVFDQNGDGFITVEELR+VLASLG+KQGRTVEDCKKM
Sbjct: 141 EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVEELRTVLASLGIKQGRTVEDCKKM 200

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           IMKVDVDGDGMV+YKEFKQMMKGGGFSAL
Sbjct: 201 IMKVDVDGDGMVDYKEFKQMMKGGGFSAL 229

[Close]
BLAST of CmaCh06G016450 vs. TrEMBL
Match: A0A072UWV9_MEDTR (EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_4g067270 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 1.8e-71
Identity = 137/150 (91.33%), Postives = 145/150 (96.67%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDP EL+RVFQMFDRNGDG+ITKKEL DSLENLGIFIPDK+LTQMIEKIDVN DG VD+D
Sbjct: 1   MDPNELKRVFQMFDRNGDGRITKKELTDSLENLGIFIPDKELTQMIEKIDVNGDGCVDLD 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+EKDEEEDMREAFNVFDQNGDGFITVEELR VL+SLGLKQGRTVE+CK+M
Sbjct: 61  EFGELYQSIMDEKDEEEDMREAFNVFDQNGDGFITVEELRVVLSSLGLKQGRTVEECKRM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]
BLAST of CmaCh06G016450 vs. TrEMBL
Match: A0A061DNU9_THECC (RNA-binding CRS1 / YhbY domain protein OS=Theobroma cacao GN=TCM_002655 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.0e-70
Identity = 133/149 (89.26%), Postives = 145/149 (97.32%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDP ELRRVFQMFDRNGDG+ITKKEL+DSLENLGIFIPDK+L+QMIEKIDVN DGYVDID
Sbjct: 4   MDPAELRRVFQMFDRNGDGKITKKELSDSLENLGIFIPDKELSQMIEKIDVNGDGYVDID 63

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG LY+SIMNE+DEEEDM+EAFNVFDQNGDGFITVEELRSVLASLGLKQGRT+E+CK+M
Sbjct: 64  EFGALYESIMNERDEEEDMKEAFNVFDQNGDGFITVEELRSVLASLGLKQGRTIEECKRM 123

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           I KVDVDGDGMVN+KEFKQMMKGGGF+AL
Sbjct: 124 IKKVDVDGDGMVNFKEFKQMMKGGGFAAL 152

[Close]
BLAST of CmaCh06G016450 vs. TrEMBL
Match: B9HH51_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s01960g PE=4 SV=2)

HSP 1 Score: 269.6 bits (688), Expect = 2.2e-69
Identity = 132/150 (88.00%), Postives = 145/150 (96.67%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD  EL+RVFQMFDRNGDG+IT+KELNDSLEN+GIFIPDK+LTQMIEKIDVN DG VDID
Sbjct: 64  MDQAELKRVFQMFDRNGDGRITQKELNDSLENIGIFIPDKELTQMIEKIDVNGDGCVDID 123

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQS+M+EKDEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRT EDCK+M
Sbjct: 124 EFGELYQSLMDEKDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTFEDCKRM 183

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMV+Y+EFK+MMKGGGFSA+G
Sbjct: 184 IMKVDVDGDGMVDYREFKKMMKGGGFSAVG 213

[Close]
BLAST of CmaCh06G016450 vs. TAIR10
Match: AT3G07490.1 (AT3G07490.1 ARF-GAP domain 11)

HSP 1 Score: 263.1 bits (671), Expect = 1.1e-70
Identity = 129/150 (86.00%), Postives = 141/150 (94.00%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD  EL R+FQMFDRNGDG+ITK+ELNDSLENLGI+IPDKDL QMIEKID+N DGYVDI+
Sbjct: 1   MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIE 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ+IM E+DEEEDMREAFNVFDQN DGFITVEELRSVLASLGLKQGRT+EDCK+M
Sbjct: 61  EFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           I KVDVDGDGMVN+KEFKQMMKGGGF+ALG
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMKGGGFAALG 150

[Close]
BLAST of CmaCh06G016450 vs. TAIR10
Match: AT1G05990.1 (AT1G05990.1 EF hand calcium-binding protein family)

HSP 1 Score: 245.4 bits (625), Expect = 2.3e-65
Identity = 119/150 (79.33%), Postives = 142/150 (94.67%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTEL+RVFQMFD+NGDG IT KEL+++L +LGI+IPDK+LTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMNEKD-EEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKK 120
           EFGELY++IM+E+D EEEDM+EAFNVFDQNGDGFITV+EL++VL+SLGLKQG+T++DCKK
Sbjct: 61  EFGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKK 120

Query: 121 MIMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           MI KVDVDGDG VNYKEF+QMMKGGGF++L
Sbjct: 121 MIKKVDVDGDGRVNYKEFRQMMKGGGFNSL 150

[Close]
BLAST of CmaCh06G016450 vs. TAIR10
Match: AT2G43290.1 (AT2G43290.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 234.6 bits (597), Expect = 4.1e-62
Identity = 116/153 (75.82%), Postives = 136/153 (88.89%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           +DP+EL+RVFQMFD+NGDG+ITK+ELNDSLENLGI+IPDKDLTQMI KID N DG VDID
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 61  EFGELYQSIMNE-----KDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVE 120
           EF  LY SI++E     + EEEDM++AFNVFDQ+GDGFITVEEL+SV+ASLGLKQG+T++
Sbjct: 121 EFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLD 180

Query: 121 DCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSA 149
            CKKMIM+VD DGDG VNYKEF QMMKGGGFS+
Sbjct: 181 GCKKMIMQVDADGDGRVNYKEFLQMMKGGGFSS 213

[Close]
BLAST of CmaCh06G016450 vs. TAIR10
Match: AT4G12860.1 (AT4G12860.1 EF hand calcium-binding protein family)

HSP 1 Score: 226.9 bits (577), Expect = 8.5e-60
Identity = 109/149 (73.15%), Postives = 129/149 (86.58%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD  EL RVFQMFD+NGDG+I K EL D  +++GI +P+ ++ +MI K+DVN DG +DID
Sbjct: 1   MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ ++ EK+EEEDMREAF VFDQNGDGFIT EELRSVLAS+GLKQGRT+EDCKKM
Sbjct: 61  EFGSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           I KVDVDGDGMVN+KEFKQMM+GGGF+AL
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMRGGGFAAL 149

[Close]
BLAST of CmaCh06G016450 vs. TAIR10
Match: AT3G59440.1 (AT3G59440.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 217.2 bits (552), Expect = 6.7e-57
Identity = 109/145 (75.17%), Postives = 126/145 (86.90%), Query Frame = 1 

Query: 3   PTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDIDEF 62
           P +L+RVFQMFD+NGDG+ITK+ELNDSLENLGIF+PDKDL QMI+K+D N DG VDI+EF
Sbjct: 49  PVDLKRVFQMFDKNGDGRITKEELNDSLENLGIFMPDKDLIQMIQKMDANGDGCVDINEF 108

Query: 63  GELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKMIM 122
             LY SI+ EK EE DMR+AFNVFDQ+GDGFITVEEL SV+ SLGLKQG+T+E CK+MIM
Sbjct: 109 ESLYGSIVEEK-EEGDMRDAFNVFDQDGDGFITVEELNSVMTSLGLKQGKTLECCKEMIM 168

Query: 123 KVDVDGDGMVNYKEFKQMMKGGGFS 148
           +VD DGDG VNYKEF QMMK G FS
Sbjct: 169 QVDEDGDGRVNYKEFLQMMKSGDFS 192

[Close]
BLAST of CmaCh06G016450 vs. NCBI nr
Match: gi|449468778|ref|XP_004152098.1| (PREDICTED: calmodulin-like protein 3 [Cucumis sativus])

HSP 1 Score: 286.2 bits (731), Expect = 3.3e-74
Identity = 143/150 (95.33%), Postives = 148/150 (98.67%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDG+ITKKEL+DSLENLGIFIPDKDLTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]
BLAST of CmaCh06G016450 vs. NCBI nr
Match: gi|1009139197|ref|XP_015886996.1| (PREDICTED: calmodulin-like protein 3 [Ziziphus jujuba])

HSP 1 Score: 282.3 bits (721), Expect = 4.8e-73
Identity = 140/149 (93.96%), Postives = 147/149 (98.66%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTEL+RVFQMFDRNGDG+ITKKELNDSLENLGIFIPDK+LTQMIEKIDVN DG VD+D
Sbjct: 93  MDPTELKRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKELTQMIEKIDVNGDGCVDMD 152

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+EKDEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCK+M
Sbjct: 153 EFGELYQSIMDEKDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKRM 212

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           IMKVDVDGDGMVNYKEFKQMMKGGGFSAL
Sbjct: 213 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 241

[Close]
BLAST of CmaCh06G016450 vs. NCBI nr
Match: gi|28301674|emb|CAB63264.3| (calcium-binding protein [Lotus japonicus])

HSP 1 Score: 279.6 bits (714), Expect = 3.1e-72
Identity = 138/149 (92.62%), Postives = 147/149 (98.66%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTEL+RVFQMFDRNGDG+ITKKELNDSLENLGIFIPDK+LTQMIE+IDVN DG VDID
Sbjct: 81  MDPTELKRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKELTQMIERIDVNGDGCVDID 140

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEEDMREAFNVFDQNGDGFITVEELR+VLASLG+KQGRTVEDCKKM
Sbjct: 141 EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVEELRTVLASLGIKQGRTVEDCKKM 200

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           IMKVDVDGDGMV+YKEFKQMMKGGGFSAL
Sbjct: 201 IMKVDVDGDGMVDYKEFKQMMKGGGFSAL 229

[Close]
BLAST of CmaCh06G016450 vs. NCBI nr
Match: gi|502148960|ref|XP_004507338.1| (PREDICTED: calmodulin-like protein 3 [Cicer arietinum])

HSP 1 Score: 276.9 bits (707), Expect = 2.0e-71
Identity = 137/150 (91.33%), Postives = 146/150 (97.33%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDP+EL+RVFQMFDRNGDG+ITKKEL DSLENLGIFIPDK+LTQMIEKIDVN DG VD+D
Sbjct: 1   MDPSELKRVFQMFDRNGDGRITKKELTDSLENLGIFIPDKELTQMIEKIDVNGDGCVDLD 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEEDMREAFNVFDQNGDGFITVEELR VL+SLGLKQGRTVE+CKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVEELRVVLSSLGLKQGRTVEECKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]
BLAST of CmaCh06G016450 vs. NCBI nr
Match: gi|922368269|ref|XP_013456299.1| (EF hand calcium-binding family protein [Medicago truncatula])

HSP 1 Score: 276.6 bits (706), Expect = 2.6e-71
Identity = 137/150 (91.33%), Postives = 145/150 (96.67%), Query Frame = 1 

Query: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDP EL+RVFQMFDRNGDG+ITKKEL DSLENLGIFIPDK+LTQMIEKIDVN DG VD+D
Sbjct: 1   MDPNELKRVFQMFDRNGDGRITKKELTDSLENLGIFIPDKELTQMIEKIDVNGDGCVDLD 60

Query: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+EKDEEEDMREAFNVFDQNGDGFITVEELR VL+SLGLKQGRTVE+CK+M
Sbjct: 61  EFGELYQSIMDEKDEEEDMREAFNVFDQNGDGFITVEELRVVLSSLGLKQGRTVEECKRM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

The following BLAST results are available for this feature:
BLAST of CmaCh06G016450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML3_ARATH1.9e-6986.00Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1[more]
CML7_ARATH4.1e-6479.33Calmodulin-like protein 7 OS=Arabidopsis thaliana GN=CML7 PE=2 SV=1[more]
CML5_ARATH7.2e-6175.82Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2[more]
CML2_ARATH1.5e-5873.15Calmodulin-like protein 2 OS=Arabidopsis thaliana GN=CML2 PE=2 SV=1[more]
CML4_ARATH1.2e-5575.17Calmodulin-like protein 4 OS=Arabidopsis thaliana GN=CML4 PE=2 SV=1[more]
BLAST of CmaCh06G016450 vs. TrEMBL
Match NameE-valueIdentityDescription
D1MWZ5_CITLA2.3e-7495.33Calcium-binding EF-hand protein OS=Citrullus lanatus subsp. vulgaris GN=CitCaEFh... [more]
Q9SCA1_LOTJA2.2e-7292.62Calcium-binding protein OS=Lotus japonicus GN=cbp1 PE=2 SV=3[more]
A0A072UWV9_MEDTR1.8e-7191.33EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_4g067270 PE... [more]
A0A061DNU9_THECC2.0e-7089.26RNA-binding CRS1 / YhbY domain protein OS=Theobroma cacao GN=TCM_002655 PE=4 SV=... [more]
B9HH51_POPTR2.2e-6988.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s01960g PE=4 SV=2[more]
BLAST of CmaCh06G016450 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07490.11.1e-7086.00 ARF-GAP domain 11[more]
AT1G05990.12.3e-6579.33 EF hand calcium-binding protein family[more]
AT2G43290.14.1e-6275.82 Calcium-binding EF-hand family protein[more]
AT4G12860.18.5e-6073.15 EF hand calcium-binding protein family[more]
AT3G59440.16.7e-5775.17 Calcium-binding EF-hand family protein[more]
BLAST of CmaCh06G016450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449468778|ref|XP_004152098.1|3.3e-7495.33PREDICTED: calmodulin-like protein 3 [Cucumis sativus][more]
gi|1009139197|ref|XP_015886996.1|4.8e-7393.96PREDICTED: calmodulin-like protein 3 [Ziziphus jujuba][more]
gi|28301674|emb|CAB63264.3|3.1e-7292.62calcium-binding protein [Lotus japonicus][more]
gi|502148960|ref|XP_004507338.1|2.0e-7191.33PREDICTED: calmodulin-like protein 3 [Cicer arietinum][more]
gi|922368269|ref|XP_013456299.1|2.6e-7191.33EF hand calcium-binding family protein [Medicago truncatula][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000272 polysaccharide catabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G016450.1CmaCh06G016450.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 76..142
score: 3.2E-13coord: 5..67
score: 2.1
IPR002048EF-hand domainSMARTSM00054efh_1coord: 5..33
score: 8.1E-5coord: 41..69
score: 1.3E-4coord: 78..106
score: 4.2E-7coord: 116..144
score: 4.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 37..72
score: 13.035coord: 74..109
score: 17.359coord: 1..36
score: 14.569coord: 112..147
score: 15
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 89..142
score: 2.0E-23coord: 5..88
score: 6.2
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 5..144
score: 8.15
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 50..62
score: -coord: 125..137
score: -coord: 14..26
score: -coord: 87..99
scor
NoneNo IPR availablePRINTSPR01697PARVALBUMINcoord: 87..103
score: 3.0E-5coord: 65..83
score: 3.0E-5coord: 124..137
score: 3.
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 1..150
score: 1.6E
NoneNo IPR availablePANTHERPTHR10891:SF586CALMODULIN-LIKE PROTEIN 6-RELATEDcoord: 1..150
score: 1.6E