Carg15478 (gene) Silver-seed gourd

Overview
NameCarg15478
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCalmodulin-like protein
LocationCucurbita_argyrosperma_scaffold_069 : 367718 .. 368170 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCGACGGAACTACGAAGAGTATTCCAGATGTTCGATCGCAATGGCGACGGGCGAATCACGAAGAAGGAACTAAACGACTCGTTAGAGAATTTGGGGATTTTCATCCCGGACAAAGATCTGACTCAAATGATCGAGAAAATTGATGTTAATAACGATGGATACGTGGACATTGACGAGTTCGGAGAGCTGTACCAGTCGATTATGAACGAGAAAGACGAGGAGGAGGACATGAGAGAAGCGTTCAACGTCTTTGACCAGAACGGCGATGGATTCATCACCGTCGAGGAATTGAGGTCAGTTCTAGCTTCCTTGGGGCTTAAGCAAGGGAGAACTGTTGAGGATTGCAAGAAGATGATCATGAAGGTGGATGTCGATGGAGATGGAATGGTCAATTACAAGGAGTTCAAGCAAATGATGAAGGGAGGTGGATTTAGTGCATTAGGTTGA

mRNA sequence

ATGGATCCGACGGAACTACGAAGAGTATTCCAGATGTTCGATCGCAATGGCGACGGGCGAATCACGAAGAAGGAACTAAACGACTCGTTAGAGAATTTGGGGATTTTCATCCCGGACAAAGATCTGACTCAAATGATCGAGAAAATTGATGTTAATAACGATGGATACGTGGACATTGACGAGTTCGGAGAGCTGTACCAGTCGATTATGAACGAGAAAGACGAGGAGGAGGACATGAGAGAAGCGTTCAACGTCTTTGACCAGAACGGCGATGGATTCATCACCGTCGAGGAATTGAGGTCAGTTCTAGCTTCCTTGGGGCTTAAGCAAGGGAGAACTGTTGAGGATTGCAAGAAGATGATCATGAAGGTGGATGTCGATGGAGATGGAATGGTCAATTACAAGGAGTTCAAGCAAATGATGAAGGGAGGTGGATTTAGTGCATTAGGTTGA

Coding sequence (CDS)

ATGGATCCGACGGAACTACGAAGAGTATTCCAGATGTTCGATCGCAATGGCGACGGGCGAATCACGAAGAAGGAACTAAACGACTCGTTAGAGAATTTGGGGATTTTCATCCCGGACAAAGATCTGACTCAAATGATCGAGAAAATTGATGTTAATAACGATGGATACGTGGACATTGACGAGTTCGGAGAGCTGTACCAGTCGATTATGAACGAGAAAGACGAGGAGGAGGACATGAGAGAAGCGTTCAACGTCTTTGACCAGAACGGCGATGGATTCATCACCGTCGAGGAATTGAGGTCAGTTCTAGCTTCCTTGGGGCTTAAGCAAGGGAGAACTGTTGAGGATTGCAAGAAGATGATCATGAAGGTGGATGTCGATGGAGATGGAATGGTCAATTACAAGGAGTTCAAGCAAATGATGAAGGGAGGTGGATTTAGTGCATTAGGTTGA

Protein sequence

MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDIDEFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Homology
[Close]
BLAST of Carg15478 vs. NCBI nr
Match: XP_022932721.1 (calmodulin-like protein 3 [Cucurbita moschata])

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]
BLAST of Carg15478 vs. NCBI nr
Match: XP_022972114.1 (calmodulin-like protein 3 [Cucurbita maxima] >XP_023540679.1 calmodulin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.9 bits (629), Expect = 4.4e-62
Identity = 149/150 (99.33%), Postives = 150/150 (100.00%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDG+ITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGQITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]
BLAST of Carg15478 vs. NCBI nr
Match: XP_022145111.1 (calmodulin-like protein 3 [Momordica charantia])

HSP 1 Score: 236.5 bits (602), Expect = 5.9e-59
Identity = 123/150 (82.00%), Postives = 126/150 (84.00%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDGRITKKEL+DSLENLGIFIPDKDLTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNCDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEE                      RSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]
BLAST of Carg15478 vs. NCBI nr
Match: XP_015886996.1 (calmodulin-like protein 3 [Ziziphus jujuba])

HSP 1 Score: 233.8 bits (595), Expect = 3.8e-58
Identity = 136/149 (91.28%), Postives = 141/149 (94.63%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTEL+RVFQMFDRNGDGRITKKELNDSLENLGIFIPDK+LTQMIEKIDVN DG VD+D
Sbjct: 93  MDPTELKRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKELTQMIEKIDVNGDGCVDMD 152

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+EKDEEE      XXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCK+M
Sbjct: 153 EFGELYQSIMDEKDEEEDMREAFXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKRM 212

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           IMKVDVDGDGMVNYKEFKQMMKGGGFSAL
Sbjct: 213 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 241

[Close]
BLAST of Carg15478 vs. NCBI nr
Match: XP_023890833.1 (calmodulin-like protein 3 [Quercus suber] >POE62623.1 calmodulin-like protein 5 [Quercus suber])

HSP 1 Score: 230.7 bits (587), Expect = 3.2e-57
Identity = 132/150 (88.00%), Postives = 138/150 (92.00%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDP EL+RVFQ+FDRNGDGRITKKELNDSLENLGIFIPDK+L QMIEKID+N DG VDID
Sbjct: 1   MDPMELKRVFQLFDRNGDGRITKKELNDSLENLGIFIPDKELIQMIEKIDINGDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEE        XXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMKEAFNVXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]
BLAST of Carg15478 vs. TAIR10
Match: AT3G07490.1 (ARF-GAP domain 11)

HSP 1 Score: 215.3 bits (547), Expect = 2.5e-56
Identity = 120/150 (80.00%), Postives = 132/150 (88.00%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD  EL R+FQMFDRNGDG+ITK+ELNDSLENLGI+IPDKDL QMIEKID+N DGYVDI+
Sbjct: 1   MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIE 60

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ+IM E+DEEE         XXXXXXXXXXXX RSVLASLGLKQGRT+EDCK+M
Sbjct: 61  EFGGLYQTIMEERDEEEDMREAFNVFXXXXXXXXXXXXLRSVLASLGLKQGRTLEDCKRM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           I KVDVDGDGMVN+KEFKQMMKGGGF+ALG
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMKGGGFAALG 150

[Close]
BLAST of Carg15478 vs. TAIR10
Match: AT4G12860.1 (EF hand calcium-binding protein family)

HSP 1 Score: 181.0 bits (458), Expect = 5.3e-46
Identity = 89/149 (59.73%), Postives = 109/149 (73.15%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD  EL RVFQMFD+NGDG+I K EL D  +++GI +P+ ++ +MI K+DVN DG +DID
Sbjct: 1   MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDID 60

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ ++ EK+EEE                      RSVLAS+GLKQGRT+EDCKKM
Sbjct: 61  EFGSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           I KVDVDGDGMVN+KEFKQMM+GGGF+AL
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMRGGGFAAL 149

[Close]
BLAST of Carg15478 vs. TAIR10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 176.8 bits (447), Expect = 1.0e-44
Identity = 115/153 (75.16%), Postives = 129/153 (84.31%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           +DP+EL+RVFQMFD+NGDGRITK+ELNDSLENLGI+IPDKDLTQMI KID N DG VDID
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 61  EFGELYQSIMNE-----KDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVE 120
           EF  LY SI++E     + EE XXXXXXXXXXXXXXXXXXXXXX      LGLKQG+T++
Sbjct: 121 EFESLYSSIVDEHHNDGETEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLKQGKTLD 180

Query: 121 DCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSA 149
            CKKMIM+VD DGDG VNYKEF QMMKGGGFS+
Sbjct: 181 GCKKMIMQVDADGDGRVNYKEFLQMMKGGGFSS 213

[Close]
BLAST of Carg15478 vs. TAIR10
Match: AT4G03290.1 (EF hand calcium-binding protein family)

HSP 1 Score: 114.4 bits (285), Expect = 6.1e-26
Identity = 80/149 (53.69%), Postives = 97/149 (65.10%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD TEL RVFQMFD++GDG+IT KELN+S +NLGI IP+                     
Sbjct: 1   MDSTELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  EFGELYQSIMNEKDE---EEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDC 120
                    M E ++   EE       XXXXXXXXXXXXXX ++VL+SLGLKQG+T+E+C
Sbjct: 61  XXXXXXXXXMVEDEDEVGEEDMKEAFNXXXXXXXXXXXXXXLKAVLSSLGLKQGKTLEEC 120

Query: 121 KKMIMKVDVDGDGMVNYKEFKQMMKGGGF 147
           +KMIM+VDVDGDG VNY EF+QMMK G F
Sbjct: 121 RKMIMQVDVDGDGRVNYMEFRQMMKKGRF 149

[Close]
BLAST of Carg15478 vs. TAIR10
Match: AT3G59440.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 105.5 bits (262), Expect = 2.8e-23
Identity = 86/145 (59.31%), Postives = 95/145 (65.52%), Query Frame = 0 

Query: 3   PTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDIDEF 62
           P +L+RVFQMFD+NGDGRITK+ELNDSLENLGIF+PDK                      
Sbjct: 49  PVDLKRVFQMFDKNGDGRITKEELNDSLENLGIFMPDK-XXXXXXXXXXXXXXXXXXXXX 108

Query: 63  GELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKMIM 122
                          XXXXXXXXXXXXXXXXXXXXXX      LGLKQG+T+E CK+MIM
Sbjct: 109 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLKQGKTLECCKEMIM 168

Query: 123 KVDVDGDGMVNYKEFKQMMKGGGFS 148
           +VD DGDG VNYKEF QMMK G FS
Sbjct: 169 QVDEDGDGRVNYKEFLQMMKSGDFS 192

[Close]
BLAST of Carg15478 vs. Swiss-Prot
Match: sp|Q9SRR7|CML3_ARATH (Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.6e-55
Identity = 120/150 (80.00%), Postives = 132/150 (88.00%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD  EL R+FQMFDRNGDG+ITK+ELNDSLENLGI+IPDKDL QMIEKID+N DGYVDI+
Sbjct: 1   MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIE 60

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ+IM E+DEEE         XXXXXXXXXXXX RSVLASLGLKQGRT+EDCK+M
Sbjct: 61  EFGGLYQTIMEERDEEEDMREAFNVFXXXXXXXXXXXXLRSVLASLGLKQGRTLEDCKRM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           I KVDVDGDGMVN+KEFKQMMKGGGF+ALG
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMKGGGFAALG 150

[Close]
BLAST of Carg15478 vs. Swiss-Prot
Match: sp|Q9SU00|CML2_ARATH (Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 9.6e-45
Identity = 89/149 (59.73%), Postives = 109/149 (73.15%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD  EL RVFQMFD+NGDG+I K EL D  +++GI +P+ ++ +MI K+DVN DG +DID
Sbjct: 1   MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDID 60

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ ++ EK+EEE                      RSVLAS+GLKQGRT+EDCKKM
Sbjct: 61  EFGSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           I KVDVDGDGMVN+KEFKQMM+GGGF+AL
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMRGGGFAAL 149

[Close]
BLAST of Carg15478 vs. Swiss-Prot
Match: sp|O22845|CML5_ARATH (Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2)

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-43
Identity = 115/153 (75.16%), Postives = 129/153 (84.31%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           +DP+EL+RVFQMFD+NGDGRITK+ELNDSLENLGI+IPDKDLTQMI KID N DG VDID
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 61  EFGELYQSIMNE-----KDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVE 120
           EF  LY SI++E     + EE XXXXXXXXXXXXXXXXXXXXXX      LGLKQG+T++
Sbjct: 121 EFESLYSSIVDEHHNDGETEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLKQGKTLD 180

Query: 121 DCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSA 149
            CKKMIM+VD DGDG VNYKEF QMMKGGGFS+
Sbjct: 181 GCKKMIMQVDADGDGRVNYKEFLQMMKGGGFSS 213

[Close]
BLAST of Carg15478 vs. Swiss-Prot
Match: sp|Q2QVI1|CML28_ORYSJ (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica OX=39947 GN=CML28 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-39
Identity = 86/171 (50.29%), Postives = 108/171 (63.16%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MD TELR+VF+MFD+NGDGRITKKEL +S +N GIFIPD +L   ++KID N DG VD++
Sbjct: 1   MDSTELRKVFKMFDKNGDGRITKKELGESFKNFGIFIPDDELDATMDKIDANGDGCVDVE 60

Query: 61  EFGELYQSIMNE---------------------KDEEEXXXXXXXXXXXXXXXXXXXXXX 120
           EFG LY+SI+ +                      DE+E                      
Sbjct: 61  EFGLLYRSILGDDAAGRAPRTAAAAIGGEGGAPDDEDEGMREAFNVFDQNGDGFITVDEL 120

Query: 121 RSVLASLGLKQGRTVEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           RSVL+SLGLK GRT +DC++MI  VD DGDG V++KEFKQMM+GGGF+ALG
Sbjct: 121 RSVLSSLGLKHGRTADDCRRMISMVDADGDGRVDFKEFKQMMRGGGFAALG 171

[Close]
BLAST of Carg15478 vs. Swiss-Prot
Match: sp|Q0DZP5|CML17_ORYSJ (Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica OX=39947 GN=CML17 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.5e-29
Identity = 71/156 (45.51%), Postives = 96/156 (61.54%), Query Frame = 0 

Query: 5   ELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDIDEFGE 64
           ELRRVF++FDR+GDGRIT++EL +SLE LG+ +  ++L   I +ID N DG VD+DEF +
Sbjct: 8   ELRRVFELFDRDGDGRITREELTESLERLGMPVHREELAATIARIDANGDGCVDMDEFTQ 67

Query: 65  LYQSIMNEKD-----------EEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRT 124
           LY+++M               +E                        +VLASLG+KQGRT
Sbjct: 68  LYETVMRVDGXXXXXXXXCDVDEASMREAFDVFDRNGDGFITVDELGAVLASLGIKQGRT 127

Query: 125 VEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
            EDC +MI +VD DGDG V++ EFKQMM+GG F+ L
Sbjct: 128 AEDCGRMIGQVDRDGDGRVDFLEFKQMMRGGAFATL 163

[Close]
BLAST of Carg15478 vs. TrEMBL
Match: tr|A0A2N9ITR2|A0A2N9ITR2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55657 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.1e-57
Identity = 137/150 (91.33%), Postives = 143/150 (95.33%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTEL+RVFQMFDRNGDGRITKKELNDSLENLGIFIPDK+LTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELKRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKELTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEE   XXXXXXXXXXXXXXXXXXX +VLASLGLKQGRT+EDCK M
Sbjct: 61  EFGELYQSIMDERDEEEDMKXXXXXXXXXXXXXXXXXXXXAVLASLGLKQGRTIEDCKMM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]
BLAST of Carg15478 vs. TrEMBL
Match: tr|A0A2P4I279|A0A2P4I279_QUESU (Calmodulin-like protein 5 OS=Quercus suber OX=58331 GN=CFP56_19918 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.1e-57
Identity = 132/150 (88.00%), Postives = 138/150 (92.00%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDP EL+RVFQ+FDRNGDGRITKKELNDSLENLGIFIPDK+L QMIEKID+N DG VDID
Sbjct: 1   MDPMELKRVFQLFDRNGDGRITKKELNDSLENLGIFIPDKELIQMIEKIDINGDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEE        XXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMKEAFNVXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]
BLAST of Carg15478 vs. TrEMBL
Match: tr|Q9SCA1|Q9SCA1_LOTJA (Calcium-binding protein OS=Lotus japonicus OX=34305 GN=cbp1 PE=2 SV=3)

HSP 1 Score: 229.9 bits (585), Expect = 3.6e-57
Identity = 117/149 (78.52%), Postives = 125/149 (83.89%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTEL+RVFQMFDRNGDGRITKKELNDSLENLGIFIPDK+LTQMIE+IDVN DG VDID
Sbjct: 81  MDPTELKRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKELTQMIERIDVNGDGCVDID 140

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEEE                      R+VLASLG+KQGRTVEDCKKM
Sbjct: 141 EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVEELRTVLASLGIKQGRTVEDCKKM 200

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           IMKVDVDGDGMV+YKEFKQMMKGGGFSAL
Sbjct: 201 IMKVDVDGDGMVDYKEFKQMMKGGGFSAL 229

[Close]
BLAST of Carg15478 vs. TrEMBL
Match: tr|D1MWZ5|D1MWZ5_CITLA (Calcium-binding EF-hand protein OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitCaEFh PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.4e-56
Identity = 140/150 (93.33%), Postives = 143/150 (95.33%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDGRITKKEL+DSLENLGIFIPDKDLTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEE XXXXXXXXXXXXXXXXXXXXXX    ASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]
BLAST of Carg15478 vs. TrEMBL
Match: tr|A0A1S3BXJ7|A0A1S3BXJ7_CUCME (calmodulin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103494537 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.4e-56
Identity = 140/150 (93.33%), Postives = 143/150 (95.33%), Query Frame = 0 

Query: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60
           MDPTELRRVFQMFDRNGDGRITKKEL+DSLENLGIFIPDKDLTQMIEKIDVN DG VDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMNEKDEEEXXXXXXXXXXXXXXXXXXXXXXRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIM+E+DEE XXXXXXXXXXXXXXXXXXXXXX    ASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

The following BLAST results are available for this feature:
BLAST of Carg15478 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022932721.11.5e-62100.00calmodulin-like protein 3 [Cucurbita moschata][more]
XP_022972114.14.4e-6299.33calmodulin-like protein 3 [Cucurbita maxima] >XP_023540679.1 calmodulin-like pro... [more]
XP_022145111.15.9e-5982.00calmodulin-like protein 3 [Momordica charantia][more]
XP_015886996.13.8e-5891.28calmodulin-like protein 3 [Ziziphus jujuba][more]
XP_023890833.13.2e-5788.00calmodulin-like protein 3 [Quercus suber] >POE62623.1 calmodulin-like protein 5 ... [more]
BLAST of Carg15478 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07490.12.5e-5680.00ARF-GAP domain 11[more]
AT4G12860.15.3e-4659.73EF hand calcium-binding protein family[more]
AT2G43290.11.0e-4475.16Calcium-binding EF-hand family protein[more]
AT4G03290.16.1e-2653.69EF hand calcium-binding protein family[more]
AT3G59440.12.8e-2359.31Calcium-binding EF-hand family protein[more]
BLAST of Carg15478 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SRR7|CML3_ARATH4.6e-5580.00Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1[more]
sp|Q9SU00|CML2_ARATH9.6e-4559.73Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1[more]
sp|O22845|CML5_ARATH1.8e-4375.16Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2[more]
sp|Q2QVI1|CML28_ORYSJ2.1e-3950.29Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q0DZP5|CML17_ORYSJ2.5e-2945.51Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
BLAST of Carg15478 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2N9ITR2|A0A2N9ITR2_FAGSY2.1e-5791.33Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55657 PE=4 SV=1[more]
tr|A0A2P4I279|A0A2P4I279_QUESU2.1e-5788.00Calmodulin-like protein 5 OS=Quercus suber OX=58331 GN=CFP56_19918 PE=4 SV=1[more]
tr|Q9SCA1|Q9SCA1_LOTJA3.6e-5778.52Calcium-binding protein OS=Lotus japonicus OX=34305 GN=cbp1 PE=2 SV=3[more]
tr|D1MWZ5|D1MWZ5_CITLA2.4e-5693.33Calcium-binding EF-hand protein OS=Citrullus lanatus subsp. vulgaris OX=260674 G... [more]
tr|A0A1S3BXJ7|A0A1S3BXJ7_CUCME2.4e-5693.33calmodulin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103494537 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15478-RACarg15478-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01697PARVALBUMINcoord: 87..103
score: 44.85
coord: 65..83
score: 15.39
coord: 124..137
score: 49.64
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 109..142
e-value: 1.3E-10
score: 43.0
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 2..74
e-value: 5.5E-20
score: 74.0
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 75..108
e-value: 1.3E-13
score: 52.1
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 1..149
NoneNo IPR availablePANTHERPTHR10891:SF546SUBFAMILY NOT NAMEDcoord: 1..149
IPR002048EF-hand domainSMARTSM00054efh_1coord: 5..33
e-value: 1.4E-4
score: 31.3
coord: 116..144
e-value: 4.5E-5
score: 32.9
coord: 78..106
e-value: 4.2E-7
score: 39.6
coord: 41..69
e-value: 1.3E-4
score: 31.3
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 5..67
e-value: 2.5E-12
score: 47.0
coord: 76..142
e-value: 4.0E-13
score: 49.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 37..72
score: 13.035
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 112..147
score: 15.071
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..36
score: 14.541
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 74..109
score: 17.359
IPR002048EF-hand domainCDDcd00051EFhcoord: 78..142
e-value: 1.17675E-15
score: 66.4173
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 87..99
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 50..62
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 125..137
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 14..26
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 5..144