CmaCh06G014580 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G014580
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionChromatin structure-remodeling complex subunit snf21
LocationCma_Chr06 : 9321835 .. 9326067 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTTCCATCATCCTTTCGAGGGCTGGGTAATTTCTTCAGCTTCTAACCAGAATTTTGTTTCATGCAGTTCATCATCAGCTGCCAGTTTCTTCGCGGATATCGTTTCAGGTGTTGTATGCTTCTTCTTCTTTACTCGTCCATGAAGATTTTCTACTCTGTCAATTTCATTTCCCGACTTGGAAATGTTGCCCATTTGATAAAGCACCTTTTTTAATTTTCTTCGTGCTGTTTTTTTTAGACTCAAGAACTTTCCAACATACATTGATGTCGTTGTTCTAGCTTAAGTATCTATCTTTTTTTGATTCAATTGTAAAGTCTGTTCTGGTTTTCAACTGCCGCTGGTGAAACTTGAGCTGAACTGATATTGAAATAGCTCACAGCTAGCAGACTTGTTTGAGCTTTCCTTTCCGGCTCACGCTCAAGGTTTTTAAAATTCATGTGTTAGGGAGAGGTTTCCACAATGTTTCGTTCCCTCTTCAACCGATGTAGGATCACACAATCCACCCCTTTGGAGCCCAATGCCCTTGCTTGCACACTGCCTGGTGTCCACCCCTTTGGGGCTCAGCGTCCTCGCTGGCACATCGCCTGATGTCTGGCTTTGATACCATTTGTAACAGCCTATCCCCTTCGGGGCCTAGCGTTCTCGCTAACACATCGTCCGGTGTCTGGTTTTGATATCATTTGTAACAGTCCACCTCCCTTTGGGGCTTAGCGTTCTTGCTGGCACATAGCCCAGTGTCTAGCTTTGATACCATTTGTAACAGCCCCAAGCCCACCACTAGTAGATATTGTCCTCTTTTGGCTTTTCCTTTCGAGTTTCCTCTCAAGGTTTTTAAAACTCATATGCTAGGGAGAGGTTTTACACCCTTATAAAGAATGTTTCGTTCCCCTCTCCAACCGATGTGAGATCTCACTGGATTGTAAAATTGTAATAGTTATAGTATTATGGATGATCTTATTGGAAATATTTCATGCGACTATCTTTCGTGGTTGTTTTAGAGGATAGTTATGAGTAGTGTTTGCTTGCGCTGTCCATTTTTGTCTTCCCTTCATTCAAGCATTTTCCCTTTCAGCTATCGCTAGTTACTTGATATCCATCGAAGAAAAATATGGGAAAAATTCACACAATTGGATAGAACGTGCATTTCCTGTTTGTATTACCAGTGAATTGTTTTTATGTTAGGATCACTTTGTCCATTTTAGTGTCTAGTTGTTTTAAGTTAAATTGGTCTTTTTGTTCGTCGTCTTATCAATGTCACGATTATGATTTTCACATTTTAGGTTGCTGTCTTGGACAATATGGCGTCCGCACAAAATGTTGAGTTGGAGGCAGCAAAGTTTCTGCACAAACTAATTCAAGAATCTAGAGACGAGCCAGCAAAATTGGCTACAAAACTCTATGTGGTGTGTAATGCATTTCTTGCTTTCATTTTGTCTGCTCAATGAATGGCACGCAGAATTTTCATATTTATGATTTCATGCTTGTGTGAGTTTCAGATATTGCAACACATGAAGTCAAGTGGGAAAGAACATTCCATGCCATATCAAGTAATATCAAGGTAAAGAATGATGGTTCCATACTTTAGTGAATCAGCGATTATGTTTCCCCCTTATAATTGTTGCAGTTCCTAATGATTGTATTTTCCCGATACCGAACCGTCATTTGTTCTAATTTGGGGAAAAAAACAAACCACCTGCATTAATATGCATGATGATAGGTTATAGTTCACTATATGACTGATATCCAAAAGGCATCTATGATGCAATGGTCACCGAGGCCAAGGGTTTCTTGCAATTGGATAATCATCTATTTGGCTTTGTTTTAGTTAGATACACGAGAAATCAATTTTAATTTTTTGTAATTTAAGTAAATGCCAAATGTAACGGCCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGACTTTCCCTTTCGGCTTCCCCTTTTGGGCCCCTTTAGGAGTGAATTGTGAGATCCCACATCGGTTGGAAGGGTGTGGAAATCTCTCCCTAGCATATGTGATTTAAAACCTTGAGGGGAAGCCCAAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGGGGTGGGCTTGGTCCCTTACATAAAAAGGGTGGAAGGCCAATAGAGGAATGGTGGAAAAAGAAACTTATGGTTTGCTTTTTCATTCGTCACATCTATTGACACTTAATCCATGAAGAAGCTCTATATTGATGCCAAATTTGATTAGAAATCCTGTTTTTAAAATTCTTTTTACTGTGTAATATGTCTCTGTTAGGTTGTTGGTCTTGAATGGCATTTTGATGCAATTCTACCTCTTTACAGAATAAATGTTCATTACTTTAATCCTACCATTGTTTCTTTAGATTGCTATTCTTATTTATTTCCTTTCTGTTAACCGATACTTTTTAATCTAGAGCCATGGAGACTGTCATCAATCAACATGGTCTTGATATTGAAGCTTTGAGGGCTTCACGCCTTCCTCTCACTGGTGGAACTCAGATGAGTGATTCTACCACTGCACAATATGCGGGTACAATGATCTTCTATTTGGTACTGGTTATAAGTGAATCTGGTTTGCAAGTGCACTCGTGATTGTTTGCATAATGTTTGTCTACAAATGCACATGCTATACTTTGTTCGGAATAAATCATTGTAGAAATAATTGCAGGCTCCTCCAGTGTTGTTGGTACAGCTAAAGATTCCAAAATGGGTATATCTGGAAGTGACACCAGAAGTGGCCCACTTGCTCCAAGAAAGCCACCTGTTGCCCCAAGTAGTACAGATCATGATTACTACCAAGGACCTGCAACTCATCGGAGTGGTCAATATTTTGATCAAGGAAGTCCTTCTAGTTTGGATTCGAGGTCTGCCAACTCACAGTCACAAGAGAAGCATGATTCAGTGAGTTGGGACAAACAATTAAATGATAAGGATGGTAAGAAGGGCACCAAGAAGAGGAAGAAGGTGGATACATCAGTTATGGAACCATCTAGTGACGATACCCATCAACCTGATTCCCGCAATCCGTCGGTTAATCCTAGGAATGCGAAGACAAATAGGGTCGAACCACCGGCATATCTAGTTAAGGGAGGTATGTGCCTTTTCTTTTGTTTTTAAAGTTAGTTGGAAAGCTAGCAATGGCTTGGCCATCTAGGTCCATTTAGTCATAGTGGAAAAGTATCATGTTTATATAGGATGAACCATGGAGCATACAGTGTTTCCAACTTATATTACCAATTTACCACTATCTCCAAGCCTCTTCTACTGCTCACTGACTCTTTTATATGGTGCAGGCAATATTGAGCAGGTGAAGCATGGATTATCAAAAGCTGCTGAAAAGCATATTGACCCTCAAATGTATTCTGTGAACAGAGGTGATGGGATATCTACCTCGGGCGAAAAAGTTTTGGAGAGTGAACTACCTATATCTAGCACATCATCAGTTGATGCTGCGAAAATGATTCAGGTGCTTAATAGTTTCTTGATAATGCTAGTTTTTTTTGTTAAAAAATAGTTCCTCTGATAACTTCACTTTACCTTGGGTCACATCTCTTTTTTCTTTCTTTATAACGTTTGTGTTGTGGAAGTATAAACCTGGGTACAAATATCCAGCTACTTCAATTGATCTTCTCCTTGTACTACTTTTGTTTGTTATTCTTCTCTTTTCTTTTATTAGGGTTGATTTTCCGTTGCGTATCTTTTGCATATGACTTGAAACACCTTAGGTGCATGACGTTTGGCTTATTGCATATCCTTTCTACTCGCCTTATTGACGTTTGGCTCTCATTTCAAAATCGAAACAAAATTTGTATAGTACACTTTTCAGTACAACCACTACTTGGACTATGCAAACAGCTTTATTTGGGAACTATACTAAGAATGCCTATCCATAACGAGATATTAACTTGGCATATATTGTTAACAGGGTACATGGCGGAACAACGGACCAGAAATGAGTATGTTACGTAACCCAGTTTCTAGAGAAGCAGGAAAGCTTCCTGTTTCTCAGGTTCCTACCTCATCCCAATCTCGCTTGCCTTTCAAGGAACAACAATTAAAGCAACTTAGGGCTCAGTGCCTTGTGTTTTTAGCATTCAGGTTGCTTATTTTTCTTAATCTGCATGTTGAGTTAAAATAATATCAATATTTGTTCTAGTTGGTTGTTTAATTTTATGTTTCGTTCCTTTTTTTTCAGAAATGGTTTAATGCCAAAGAAACTGCATCTTGA

mRNA sequence

ATGGCAGTTCCATCATCCTTTCGAGGGCTGGTTCATCATCAGCTGCCAGTTTCTTCGCGGATATCGTTTCAGGTTGCTGTCTTGGACAATATGGCGTCCGCACAAAATGTTGAGTTGGAGGCAGCAAAGTTTCTGCACAAACTAATTCAAGAATCTAGAGACGAGCCAGCAAAATTGGCTACAAAACTCTATGTGATATTGCAACACATGAAGTCAAGTGGGAAAGAACATTCCATGCCATATCAAGTAATATCAAGAGCCATGGAGACTGTCATCAATCAACATGGTCTTGATATTGAAGCTTTGAGGGCTTCACGCCTTCCTCTCACTGGTGGAACTCAGATGAGTGATTCTACCACTGCACAATATGCGGGCTCCTCCAGTGTTGTTGGTACAGCTAAAGATTCCAAAATGGGTATATCTGGAAGTGACACCAGAAGTGGCCCACTTGCTCCAAGAAAGCCACCTGTTGCCCCAAGTAGTACAGATCATGATTACTACCAAGGACCTGCAACTCATCGGAGTGGTCAATATTTTGATCAAGGAAGTCCTTCTAGTTTGGATTCGAGGTCTGCCAACTCACAGTCACAAGAGAAGCATGATTCAGTGAGTTGGGACAAACAATTAAATGATAAGGATGGTAAGAAGGGCACCAAGAAGAGGAAGAAGGTGGATACATCAGTTATGGAACCATCTAGTGACGATACCCATCAACCTGATTCCCGCAATCCGTCGGTTAATCCTAGGAATGCGAAGACAAATAGGGTCGAACCACCGGCATATCTAGTTAAGGGAGGCAATATTGAGCAGGTGAAGCATGGATTATCAAAAGCTGCTGAAAAGCATATTGACCCTCAAATGTATTCTGTGAACAGAGGTGATGGGATATCTACCTCGGGCGAAAAAGTTTTGGAGAGTGAACTACCTATATCTAGCACATCATCAGTTGATGCTGCGAAAATGATTCAGGGTACATGGCGGAACAACGGACCAGAAATGAGTATGTTACGTAACCCAGTTTCTAGAGAAGCAGGAAAGCTTCCTGTTTCTCAGAAATGGTTTAATGCCAAAGAAACTGCATCTTGA

Coding sequence (CDS)

ATGGCAGTTCCATCATCCTTTCGAGGGCTGGTTCATCATCAGCTGCCAGTTTCTTCGCGGATATCGTTTCAGGTTGCTGTCTTGGACAATATGGCGTCCGCACAAAATGTTGAGTTGGAGGCAGCAAAGTTTCTGCACAAACTAATTCAAGAATCTAGAGACGAGCCAGCAAAATTGGCTACAAAACTCTATGTGATATTGCAACACATGAAGTCAAGTGGGAAAGAACATTCCATGCCATATCAAGTAATATCAAGAGCCATGGAGACTGTCATCAATCAACATGGTCTTGATATTGAAGCTTTGAGGGCTTCACGCCTTCCTCTCACTGGTGGAACTCAGATGAGTGATTCTACCACTGCACAATATGCGGGCTCCTCCAGTGTTGTTGGTACAGCTAAAGATTCCAAAATGGGTATATCTGGAAGTGACACCAGAAGTGGCCCACTTGCTCCAAGAAAGCCACCTGTTGCCCCAAGTAGTACAGATCATGATTACTACCAAGGACCTGCAACTCATCGGAGTGGTCAATATTTTGATCAAGGAAGTCCTTCTAGTTTGGATTCGAGGTCTGCCAACTCACAGTCACAAGAGAAGCATGATTCAGTGAGTTGGGACAAACAATTAAATGATAAGGATGGTAAGAAGGGCACCAAGAAGAGGAAGAAGGTGGATACATCAGTTATGGAACCATCTAGTGACGATACCCATCAACCTGATTCCCGCAATCCGTCGGTTAATCCTAGGAATGCGAAGACAAATAGGGTCGAACCACCGGCATATCTAGTTAAGGGAGGCAATATTGAGCAGGTGAAGCATGGATTATCAAAAGCTGCTGAAAAGCATATTGACCCTCAAATGTATTCTGTGAACAGAGGTGATGGGATATCTACCTCGGGCGAAAAAGTTTTGGAGAGTGAACTACCTATATCTAGCACATCATCAGTTGATGCTGCGAAAATGATTCAGGGTACATGGCGGAACAACGGACCAGAAATGAGTATGTTACGTAACCCAGTTTCTAGAGAAGCAGGAAAGCTTCCTGTTTCTCAGAAATGGTTTAATGCCAAAGAAACTGCATCTTGA

Protein sequence

MAVPSSFRGLVHHQLPVSSRISFQVAVLDNMASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMETVINQHGLDIEALRASRLPLTGGTQMSDSTTAQYAGSSSVVGTAKDSKMGISGSDTRSGPLAPRKPPVAPSSTDHDYYQGPATHRSGQYFDQGSPSSLDSRSANSQSQEKHDSVSWDKQLNDKDGKKGTKKRKKVDTSVMEPSSDDTHQPDSRNPSVNPRNAKTNRVEPPAYLVKGGNIEQVKHGLSKAAEKHIDPQMYSVNRGDGISTSGEKVLESELPISSTSSVDAAKMIQGTWRNNGPEMSMLRNPVSREAGKLPVSQKWFNAKETAS
Homology
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BLAST of CmaCh06G014580 vs. Swiss-Prot
Match: SYD_ARATH (Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana GN=SYD PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.0e-40
Identity = 110/249 (44.18%), Postives = 158/249 (63.45%), Query Frame = 1 

Query: 32  ASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMETV 91
           +S+ N+ELEAAKFLHKLIQ+S+DEPAKLATKLYVILQHMK+SGKE++MPYQVISRAM+TV
Sbjct: 3   SSSHNIELEAAKFLHKLIQDSKDEPAKLATKLYVILQHMKTSGKENTMPYQVISRAMDTV 62

Query: 92  INQHGLDIEALRASRLPLTGGTQMSDSTTAQYAGSSSVVGTAKDSKMGISGSD-TRSGPL 151
           +NQHGLDIEAL++S LP  GGTQ  DS +A  AGSS  VG + + K  +  ++ T+    
Sbjct: 63  VNQHGLDIEALKSSCLPHPGGTQTEDSGSAHLAGSSQAVGVSNEGKATLVENEMTKYDAF 122

Query: 152 APRKPPVAPSSTDHDYYQGPATHRSGQYFDQGSPSSLDSRSANSQSQEKHDSVSWDKQLN 211
              +     +S    +YQG  T +S + FD+ SPS+LDS S  SQ   + ++      +N
Sbjct: 123 TSGRQLGGSNSASQTFYQGSGT-QSNRSFDRESPSNLDSTSGISQPHNRSET------MN 182

Query: 212 DKDGKKGTKKRKKVDTSVMEPSSDDTHQPDSRNPSVNPRNAKTNRVEPPAYLVKGGNIEQ 271
            +D K   K+++   +   + + D++   DS    ++ +  + +++E P      G+I  
Sbjct: 183 QRDVKSSGKRKRGESSLSWDQNMDNSQIFDSH--KIDDQTGEVSKIEMPG---NSGDIRN 239

Query: 272 VKHGLSKAA 280
           +  GLS  A
Sbjct: 243 LHVGLSSDA 239

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BLAST of CmaCh06G014580 vs. TrEMBL
Match: A0A0A0L8X3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151390 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 2.6e-148
Identity = 284/328 (86.59%), Postives = 299/328 (91.16%), Query Frame = 1 

Query: 25  VAVLDNMASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVI 84
           VA+LD MA++QNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVI
Sbjct: 72  VAILDKMAASQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVI 131

Query: 85  SRAMETVINQHGLDIEALRASRLPLTGGTQMSDSTTAQYAGSSSVVGTAKDSKMGISGSD 144
           SRAMETVINQHGLDIEALRASRLPLTGGTQM DS+TAQYAGSSSVVG  KDSKMGISGS+
Sbjct: 132 SRAMETVINQHGLDIEALRASRLPLTGGTQMGDSSTAQYAGSSSVVGAGKDSKMGISGSE 191

Query: 145 -TRSGPLAPRKPPVAPSSTDHDYYQGPATHRSGQYFDQGSPSSLDSRSANSQSQEKHDSV 204
            ++S PLA  KPPV PSSTDHDYY G ATHRSGQ FDQ SPSSLDSRSANSQSQEKHDSV
Sbjct: 192 MSKSSPLASSKPPVGPSSTDHDYYPGSATHRSGQSFDQESPSSLDSRSANSQSQEKHDSV 251

Query: 205 SWDKQLNDKDGKKGTKKRKKVDTSVMEPSSDDTHQPDSRNPSVNPRNAKTNRVEPPAYLV 264
           +W KQLNDKDGKKG+KKRKKVDTSV+EP SD+THQ D+RN  VN RN KTNRVEP AYL 
Sbjct: 252 NWAKQLNDKDGKKGSKKRKKVDTSVVEPPSDNTHQLDTRNSLVNSRNVKTNRVEPTAYLA 311

Query: 265 KGGNIEQVKHGLSKAAEKHIDPQMYSVNRGDGISTSGEKVLESELPISSTSSVDAAKMIQ 324
           KGGNIEQVKHGL+KA EK IDPQ+YSVNRGDG STS EKVLESELP+ STSSVDA KMIQ
Sbjct: 312 KGGNIEQVKHGLTKATEKPIDPQLYSVNRGDGTSTSNEKVLESELPMPSTSSVDATKMIQ 371

Query: 325 GTWRNNGPEMSMLRNPVSREAGKLPVSQ 352
           GTWRNNGPEMSMLRN VSREAGKLPVSQ
Sbjct: 372 GTWRNNGPEMSMLRNSVSREAGKLPVSQ 399

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BLAST of CmaCh06G014580 vs. TrEMBL
Match: U5G6B8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s20050g PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.3e-74
Identity = 185/354 (52.26%), Postives = 226/354 (63.84%), Query Frame = 1 

Query: 33  SAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMETVI 92
           S+QNVE EAAKFLHKLIQ+S+DEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMETVI
Sbjct: 6   SSQNVEFEAAKFLHKLIQDSKDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMETVI 65

Query: 93  NQHGLDIEALRASRLPLTGGTQMSDSTTAQYAGSSSVVGTAKDSKMGISGSD-TRSGPLA 152
           NQHGLDIEALR+SRLPLT GTQM DS+TAQY GSS  VG  KDSK G + ++ ++    A
Sbjct: 66  NQHGLDIEALRSSRLPLTSGTQMGDSSTAQYGGSSQAVGVGKDSKAGSAENEISKIDTFA 125

Query: 153 PRKPPVAPSSTDHDYYQGPATHRSGQYFDQGSPSSLDSRSANSQSQEKHDSVSWDKQLND 212
             +PPV P +  HDYYQG  T RS Q FD  SPSSLD+RSANSQSQE+         +N 
Sbjct: 126 SSRPPVGPGTAGHDYYQGSGTQRSSQSFDHESPSSLDTRSANSQSQERG--------VNQ 185

Query: 213 KDGKKGTKKRKKVDTSV-MEPSSDDTHQPDSRNPSVNPRNAKTNRVEPPA---YLVKGG- 272
           KDGKK   KRK+VD+S+  E   D+  Q + RN  VNPR  K N+V+ P      V GG 
Sbjct: 186 KDGKKAAAKRKRVDSSLHSEMHGDNPQQLNPRNTIVNPRRGKMNKVDSPGGAFSKVHGGM 245

Query: 273 ----------------------NIEQVKHGLSK-----AAEKHIDPQMYSVNRGDGIST- 332
                                 + E  KHGL+K     +AEK  +   ++ NR D   T 
Sbjct: 246 PVTSNPTGPMGELGFAGPVQYSSSEHQKHGLTKGAVASSAEKTSEGHFFAANRVDDFPTS 305

Query: 333 -SGEKVLESELPISSTSSVDAAKMIQGTWRNNGPEMSMLRNPVSREAGKLPVSQ 352
            S  K+LE+    SS    +A+K++QG  + +  E++M+R+   R+ GK PV Q
Sbjct: 306 LSTGKILEN--GGSSNMFAEASKIVQGGRQTSNSELTMIRSTSPRDVGKSPVFQ 349

[Close]
BLAST of CmaCh06G014580 vs. TrEMBL
Match: M5XIB1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015204mg PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.4e-72
Identity = 173/321 (53.89%), Postives = 211/321 (65.73%), Query Frame = 1 

Query: 31  MASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 90
           MAS+ NVELEAAKFLHKLIQ+S+DEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET
Sbjct: 1   MASSHNVELEAAKFLHKLIQDSKDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 60

Query: 91  VINQHGLDIEALRASRLPLTGGTQMSDSTTAQYAGSSSVVGTAKDSKMGISGSD-TRSGP 150
           VI+QHGLDIEAL++SRLPL+GG Q          GSS  VG +KDSK G++ ++ +   P
Sbjct: 61  VISQHGLDIEALKSSRLPLSGGAQ---------TGSSQAVGVSKDSKTGLAENEMSNMDP 120

Query: 151 LAPRKPPVAPSSTDHDYYQGPATHRSGQYFDQGSPSSLDSRSANSQSQEKHDSVSWDKQL 210
            +  +PPV PSST  DYYQG  THRS Q FD  SPSSLDSRSANSQSQE+ D+ +WDKQ+
Sbjct: 121 FSTSRPPVGPSSTGQDYYQGSTTHRSSQSFDHESPSSLDSRSANSQSQERRDTANWDKQV 180

Query: 211 NDKDGKKGTKKRKKVDTSV-MEPSSDDTHQPDSRNPSVNPRNAKTNRVEPPAYLVKGGNI 270
           N KDGKK T KRK+ DTS+  EP  D+    D+RN  VN R  K N+VEPPA     G+ 
Sbjct: 181 NRKDGKKATTKRKRGDTSIPTEPHLDNPQHLDTRNAIVNTRKGKINKVEPPA-----GSF 240

Query: 271 EQVKHGLSKAAEKHIDPQMYSVNRGDGISTSGEKVLESELPISSTSSVDAAKMIQGTWRN 330
            +++ G+                    +++S  +V E         S       +   +N
Sbjct: 241 GKIQGGVP-------------------VTSSSYQVAEPRFSSPMQYSGAMPSTGKAGRQN 288

Query: 331 NGPEMSMLRNPVSREAGKLPV 350
           +  EMSMLR+   R+ GK PV
Sbjct: 301 SALEMSMLRSAAVRDTGKTPV 288

[Close]
BLAST of CmaCh06G014580 vs. TrEMBL
Match: W9R714_9ROSA (Chromatin structure-remodeling complex subunit snf21 OS=Morus notabilis GN=L484_023563 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.7e-70
Identity = 156/238 (65.55%), Postives = 182/238 (76.47%), Query Frame = 1 

Query: 32  ASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMETV 91
           A + NVELEAAKFLHKLIQ+S+DEP+KLATKLYVILQHMKSSGKEHSMPYQVISRAMETV
Sbjct: 5   APSHNVELEAAKFLHKLIQDSKDEPSKLATKLYVILQHMKSSGKEHSMPYQVISRAMETV 64

Query: 92  INQHGLDIEALRASRLPLTGGTQMSDSTTAQYAGSSSVVGTAKDSKMGISGSD-TRSGPL 151
           INQHGLDIEAL++SRLP   GTQ +DS T Q+ GSS  VG AKDSK+G+  ++ ++  P 
Sbjct: 65  INQHGLDIEALKSSRLPAASGTQAADSATTQFGGSSQTVGAAKDSKVGLPENEVSKMDPF 124

Query: 152 APRKPPVAPSSTDHDYYQGPATHRSGQYFDQGSPSSLDSRSANSQSQEKHDSVSWDKQLN 211
           A  +PPV PSST HDY+QGP THRS Q FD  SPSSLDSRSANSQSQE+          N
Sbjct: 125 ASSRPPVGPSSTGHDYFQGPGTHRSSQSFDHESPSSLDSRSANSQSQERQ---------N 184

Query: 212 DKDGKKGTKKRKKVDTSV-MEPSSDDTHQPDSRNPSVNPRNAKTNRVEPPA-YLVKGG 267
            KDGKK T KRK+ DTSV  EP +D+  Q D+RN  VNPR  K ++VE  + + +KGG
Sbjct: 185 QKDGKKTTTKRKRGDTSVTAEPQNDNAQQLDARNTGVNPRKGKMSKVESSSGFAIKGG 233

[Close]
BLAST of CmaCh06G014580 vs. TrEMBL
Match: F6HDI3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02000 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.7e-70
Identity = 162/272 (59.56%), Postives = 199/272 (73.16%), Query Frame = 1 

Query: 31  MASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 90
           MAS QNVELEAAKFLHKLIQ+S DEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET
Sbjct: 1   MASQQNVELEAAKFLHKLIQDSTDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 60

Query: 91  VINQHGLDIEALRASRLPLTGGTQMSDSTTAQYAGSSSVVGTAKDSKMGISGSD-TRSGP 150
           VINQHGLDIEAL++SRLP +GGT + DS+ A+ AGSSS  G AKD++ G++ ++  +   
Sbjct: 61  VINQHGLDIEALKSSRLPSSGGTHVGDSSAARLAGSSSAAGVAKDTQAGLAENEMAKIDA 120

Query: 151 LAPRKPPVAPSSTDHDYYQGPATHRS-GQYFDQGSPSSLDSRSANSQSQEKHDSVSWDKQ 210
            A  +PPV PSS  HD YQG  +H+S G+ FD  SPSSLD+RSANSQSQE+ DS +W+KQ
Sbjct: 121 FASSRPPVGPSSAGHDIYQGSVSHKSGGKSFDHESPSSLDTRSANSQSQERRDSANWEKQ 180

Query: 211 LNDKDGKKGTKKRKKVDTS-VMEPSSDDTHQPDSRNPSVNPRNAK-TNRVEPP-AYLVKG 270
           +N KD KK   KRK+ D S  MEP  D+ + PD+RN  VNPR  K  N+VE P ++ VK 
Sbjct: 181 VNQKDSKKSNAKRKRTDPSPAMEPHVDNPNHPDTRNSVVNPRKGKLMNKVESPGSFSVKS 240

Query: 271 GNIEQVKHGLSKAAEKHIDPQMYSVNRGDGIS 298
           G   ++ HG   ++   ++P   S  +  G S
Sbjct: 241 GAAAKI-HGGMPSSYPVVEPGFSSSMQFSGSS 271

[Close]
BLAST of CmaCh06G014580 vs. TAIR10
Match: AT2G28290.1 (AT2G28290.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-41
Identity = 110/249 (44.18%), Postives = 158/249 (63.45%), Query Frame = 1 

Query: 32  ASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMETV 91
           +S+ N+ELEAAKFLHKLIQ+S+DEPAKLATKLYVILQHMK+SGKE++MPYQVISRAM+TV
Sbjct: 3   SSSHNIELEAAKFLHKLIQDSKDEPAKLATKLYVILQHMKTSGKENTMPYQVISRAMDTV 62

Query: 92  INQHGLDIEALRASRLPLTGGTQMSDSTTAQYAGSSSVVGTAKDSKMGISGSD-TRSGPL 151
           +NQHGLDIEAL++S LP  GGTQ  DS +A  AGSS  VG + + K  +  ++ T+    
Sbjct: 63  VNQHGLDIEALKSSCLPHPGGTQTEDSGSAHLAGSSQAVGVSNEGKATLVENEMTKYDAF 122

Query: 152 APRKPPVAPSSTDHDYYQGPATHRSGQYFDQGSPSSLDSRSANSQSQEKHDSVSWDKQLN 211
              +     +S    +YQG  T +S + FD+ SPS+LDS S  SQ   + ++      +N
Sbjct: 123 TSGRQLGGSNSASQTFYQGSGT-QSNRSFDRESPSNLDSTSGISQPHNRSET------MN 182

Query: 212 DKDGKKGTKKRKKVDTSVMEPSSDDTHQPDSRNPSVNPRNAKTNRVEPPAYLVKGGNIEQ 271
            +D K   K+++   +   + + D++   DS    ++ +  + +++E P      G+I  
Sbjct: 183 QRDVKSSGKRKRGESSLSWDQNMDNSQIFDSH--KIDDQTGEVSKIEMPG---NSGDIRN 239

Query: 272 VKHGLSKAA 280
           +  GLS  A
Sbjct: 243 LHVGLSSDA 239

[Close]
BLAST of CmaCh06G014580 vs. NCBI nr
Match: gi|700201929|gb|KGN57062.1| (hypothetical protein Csa_3G151390 [Cucumis sativus])

HSP 1 Score: 533.1 bits (1372), Expect = 3.8e-148
Identity = 284/328 (86.59%), Postives = 299/328 (91.16%), Query Frame = 1 

Query: 25  VAVLDNMASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVI 84
           VA+LD MA++QNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVI
Sbjct: 72  VAILDKMAASQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVI 131

Query: 85  SRAMETVINQHGLDIEALRASRLPLTGGTQMSDSTTAQYAGSSSVVGTAKDSKMGISGSD 144
           SRAMETVINQHGLDIEALRASRLPLTGGTQM DS+TAQYAGSSSVVG  KDSKMGISGS+
Sbjct: 132 SRAMETVINQHGLDIEALRASRLPLTGGTQMGDSSTAQYAGSSSVVGAGKDSKMGISGSE 191

Query: 145 -TRSGPLAPRKPPVAPSSTDHDYYQGPATHRSGQYFDQGSPSSLDSRSANSQSQEKHDSV 204
            ++S PLA  KPPV PSSTDHDYY G ATHRSGQ FDQ SPSSLDSRSANSQSQEKHDSV
Sbjct: 192 MSKSSPLASSKPPVGPSSTDHDYYPGSATHRSGQSFDQESPSSLDSRSANSQSQEKHDSV 251

Query: 205 SWDKQLNDKDGKKGTKKRKKVDTSVMEPSSDDTHQPDSRNPSVNPRNAKTNRVEPPAYLV 264
           +W KQLNDKDGKKG+KKRKKVDTSV+EP SD+THQ D+RN  VN RN KTNRVEP AYL 
Sbjct: 252 NWAKQLNDKDGKKGSKKRKKVDTSVVEPPSDNTHQLDTRNSLVNSRNVKTNRVEPTAYLA 311

Query: 265 KGGNIEQVKHGLSKAAEKHIDPQMYSVNRGDGISTSGEKVLESELPISSTSSVDAAKMIQ 324
           KGGNIEQVKHGL+KA EK IDPQ+YSVNRGDG STS EKVLESELP+ STSSVDA KMIQ
Sbjct: 312 KGGNIEQVKHGLTKATEKPIDPQLYSVNRGDGTSTSNEKVLESELPMPSTSSVDATKMIQ 371

Query: 325 GTWRNNGPEMSMLRNPVSREAGKLPVSQ 352
           GTWRNNGPEMSMLRN VSREAGKLPVSQ
Sbjct: 372 GTWRNNGPEMSMLRNSVSREAGKLPVSQ 399

[Close]
BLAST of CmaCh06G014580 vs. NCBI nr
Match: gi|659076630|ref|XP_008438784.1| (PREDICTED: chromatin structure-remodeling complex protein SYD isoform X3 [Cucumis melo])

HSP 1 Score: 531.6 bits (1368), Expect = 1.1e-147
Identity = 282/322 (87.58%), Postives = 296/322 (91.93%), Query Frame = 1 

Query: 31  MASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 90
           MA++QNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET
Sbjct: 1   MAASQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 60

Query: 91  VINQHGLDIEALRASRLPLTGGTQMSDSTTAQYAGSSSVVGTAKDSKMGISGSD-TRSGP 150
           VINQHGLDIEALRASRLPLTGGTQM DS+TAQYAGSSSVVG AKDSKMGISGS+ ++S P
Sbjct: 61  VINQHGLDIEALRASRLPLTGGTQMGDSSTAQYAGSSSVVGAAKDSKMGISGSEMSKSSP 120

Query: 151 LAPRKPPVAPSSTDHDYYQGPATHRSGQYFDQGSPSSLDSRSANSQSQEKHDSVSWDKQL 210
           LA  KPPV PSSTDHDYY G ATHRSGQ FDQ SPSSLDSRSANSQSQEKHDSV+WDKQL
Sbjct: 121 LASSKPPVGPSSTDHDYYPGSATHRSGQSFDQESPSSLDSRSANSQSQEKHDSVNWDKQL 180

Query: 211 NDKDGKKGTKKRKKVDTSVMEPSSDDTHQPDSRNPSVNPRNAKTNRVEPPAYLVKGGNIE 270
           NDKDGKKG+KKRKKVDTSV+EP SD+THQ D+RN  VNPRN KTNRVEPPAYL KGGNIE
Sbjct: 181 NDKDGKKGSKKRKKVDTSVVEPPSDNTHQLDTRNSLVNPRNVKTNRVEPPAYLAKGGNIE 240

Query: 271 QVKHGLSKAAEKHIDPQMYSVNRGDGISTSGEKVLESELPISSTSSVDAAKMIQGTWRNN 330
           QVKHGL+KA EK IDPQ+YSVNRGDG STS EKVLESELP+ STSSVDA KMIQGTWRNN
Sbjct: 241 QVKHGLTKATEKPIDPQLYSVNRGDGTSTSNEKVLESELPMPSTSSVDATKMIQGTWRNN 300

Query: 331 GPEMSMLRNPVSREAGKLPVSQ 352
            PEMSMLRN  SREAGKLPVSQ
Sbjct: 301 APEMSMLRNSASREAGKLPVSQ 322

[Close]
BLAST of CmaCh06G014580 vs. NCBI nr
Match: gi|659076622|ref|XP_008438779.1| (PREDICTED: chromatin structure-remodeling complex protein SYD isoform X1 [Cucumis melo])

HSP 1 Score: 526.6 bits (1355), Expect = 3.5e-146
Identity = 282/324 (87.04%), Postives = 296/324 (91.36%), Query Frame = 1 

Query: 31  MASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 90
           MA++QNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET
Sbjct: 1   MAASQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 60

Query: 91  VINQHGLDIEALRASRLPLTGGTQMSDSTTAQYA--GSSSVVGTAKDSKMGISGSD-TRS 150
           VINQHGLDIEALRASRLPLTGGTQM DS+TAQYA  GSSSVVG AKDSKMGISGS+ ++S
Sbjct: 61  VINQHGLDIEALRASRLPLTGGTQMGDSSTAQYAVAGSSSVVGAAKDSKMGISGSEMSKS 120

Query: 151 GPLAPRKPPVAPSSTDHDYYQGPATHRSGQYFDQGSPSSLDSRSANSQSQEKHDSVSWDK 210
            PLA  KPPV PSSTDHDYY G ATHRSGQ FDQ SPSSLDSRSANSQSQEKHDSV+WDK
Sbjct: 121 SPLASSKPPVGPSSTDHDYYPGSATHRSGQSFDQESPSSLDSRSANSQSQEKHDSVNWDK 180

Query: 211 QLNDKDGKKGTKKRKKVDTSVMEPSSDDTHQPDSRNPSVNPRNAKTNRVEPPAYLVKGGN 270
           QLNDKDGKKG+KKRKKVDTSV+EP SD+THQ D+RN  VNPRN KTNRVEPPAYL KGGN
Sbjct: 181 QLNDKDGKKGSKKRKKVDTSVVEPPSDNTHQLDTRNSLVNPRNVKTNRVEPPAYLAKGGN 240

Query: 271 IEQVKHGLSKAAEKHIDPQMYSVNRGDGISTSGEKVLESELPISSTSSVDAAKMIQGTWR 330
           IEQVKHGL+KA EK IDPQ+YSVNRGDG STS EKVLESELP+ STSSVDA KMIQGTWR
Sbjct: 241 IEQVKHGLTKATEKPIDPQLYSVNRGDGTSTSNEKVLESELPMPSTSSVDATKMIQGTWR 300

Query: 331 NNGPEMSMLRNPVSREAGKLPVSQ 352
           NN PEMSMLRN  SREAGKLPVSQ
Sbjct: 301 NNAPEMSMLRNSASREAGKLPVSQ 324

[Close]
BLAST of CmaCh06G014580 vs. NCBI nr
Match: gi|659076628|ref|XP_008438783.1| (PREDICTED: chromatin structure-remodeling complex protein SYD isoform X2 [Cucumis melo])

HSP 1 Score: 526.6 bits (1355), Expect = 3.5e-146
Identity = 282/324 (87.04%), Postives = 296/324 (91.36%), Query Frame = 1 

Query: 31  MASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 90
           MA++QNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET
Sbjct: 1   MAASQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 60

Query: 91  VINQHGLDIEALRASRLPLTGGTQMSDSTTAQYA--GSSSVVGTAKDSKMGISGSD-TRS 150
           VINQHGLDIEALRASRLPLTGGTQM DS+TAQYA  GSSSVVG AKDSKMGISGS+ ++S
Sbjct: 61  VINQHGLDIEALRASRLPLTGGTQMGDSSTAQYAVAGSSSVVGAAKDSKMGISGSEMSKS 120

Query: 151 GPLAPRKPPVAPSSTDHDYYQGPATHRSGQYFDQGSPSSLDSRSANSQSQEKHDSVSWDK 210
            PLA  KPPV PSSTDHDYY G ATHRSGQ FDQ SPSSLDSRSANSQSQEKHDSV+WDK
Sbjct: 121 SPLASSKPPVGPSSTDHDYYPGSATHRSGQSFDQESPSSLDSRSANSQSQEKHDSVNWDK 180

Query: 211 QLNDKDGKKGTKKRKKVDTSVMEPSSDDTHQPDSRNPSVNPRNAKTNRVEPPAYLVKGGN 270
           QLNDKDGKKG+KKRKKVDTSV+EP SD+THQ D+RN  VNPRN KTNRVEPPAYL KGGN
Sbjct: 181 QLNDKDGKKGSKKRKKVDTSVVEPPSDNTHQLDTRNSLVNPRNVKTNRVEPPAYLAKGGN 240

Query: 271 IEQVKHGLSKAAEKHIDPQMYSVNRGDGISTSGEKVLESELPISSTSSVDAAKMIQGTWR 330
           IEQVKHGL+KA EK IDPQ+YSVNRGDG STS EKVLESELP+ STSSVDA KMIQGTWR
Sbjct: 241 IEQVKHGLTKATEKPIDPQLYSVNRGDGTSTSNEKVLESELPMPSTSSVDATKMIQGTWR 300

Query: 331 NNGPEMSMLRNPVSREAGKLPVSQ 352
           NN PEMSMLRN  SREAGKLPVSQ
Sbjct: 301 NNAPEMSMLRNSASREAGKLPVSQ 324

[Close]
BLAST of CmaCh06G014580 vs. NCBI nr
Match: gi|778678724|ref|XP_011651022.1| (PREDICTED: chromatin structure-remodeling complex protein SYD isoform X2 [Cucumis sativus])

HSP 1 Score: 524.6 bits (1350), Expect = 1.3e-145
Identity = 280/322 (86.96%), Postives = 294/322 (91.30%), Query Frame = 1 

Query: 31  MASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 90
           MA++QNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET
Sbjct: 1   MAASQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 60

Query: 91  VINQHGLDIEALRASRLPLTGGTQMSDSTTAQYAGSSSVVGTAKDSKMGISGSD-TRSGP 150
           VINQHGLDIEALRASRLPLTGGTQM DS+TAQYAGSSSVVG  KDSKMGISGS+ ++S P
Sbjct: 61  VINQHGLDIEALRASRLPLTGGTQMGDSSTAQYAGSSSVVGAGKDSKMGISGSEMSKSSP 120

Query: 151 LAPRKPPVAPSSTDHDYYQGPATHRSGQYFDQGSPSSLDSRSANSQSQEKHDSVSWDKQL 210
           LA  KPPV PSSTDHDYY G ATHRSGQ FDQ SPSSLDSRSANSQSQEKHDSV+W KQL
Sbjct: 121 LASSKPPVGPSSTDHDYYPGSATHRSGQSFDQESPSSLDSRSANSQSQEKHDSVNWAKQL 180

Query: 211 NDKDGKKGTKKRKKVDTSVMEPSSDDTHQPDSRNPSVNPRNAKTNRVEPPAYLVKGGNIE 270
           NDKDGKKG+KKRKKVDTSV+EP SD+THQ D+RN  VN RN KTNRVEP AYL KGGNIE
Sbjct: 181 NDKDGKKGSKKRKKVDTSVVEPPSDNTHQLDTRNSLVNSRNVKTNRVEPTAYLAKGGNIE 240

Query: 271 QVKHGLSKAAEKHIDPQMYSVNRGDGISTSGEKVLESELPISSTSSVDAAKMIQGTWRNN 330
           QVKHGL+KA EK IDPQ+YSVNRGDG STS EKVLESELP+ STSSVDA KMIQGTWRNN
Sbjct: 241 QVKHGLTKATEKPIDPQLYSVNRGDGTSTSNEKVLESELPMPSTSSVDATKMIQGTWRNN 300

Query: 331 GPEMSMLRNPVSREAGKLPVSQ 352
           GPEMSMLRN VSREAGKLPVSQ
Sbjct: 301 GPEMSMLRNSVSREAGKLPVSQ 322

The following BLAST results are available for this feature:
BLAST of CmaCh06G014580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SYD_ARATH2.0e-4044.18Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana GN=SY... [more]
BLAST of CmaCh06G014580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8X3_CUCSA2.6e-14886.59Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151390 PE=4 SV=1[more]
U5G6B8_POPTR3.3e-7452.26Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s20050g PE=4 SV=1[more]
M5XIB1_PRUPE1.4e-7253.89Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015204mg PE=4 S... [more]
W9R714_9ROSA1.7e-7065.55Chromatin structure-remodeling complex subunit snf21 OS=Morus notabilis GN=L484_... [more]
F6HDI3_VITVI1.7e-7059.56Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02000 PE=4 SV=... [more]
BLAST of CmaCh06G014580 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28290.11.1e-4144.18 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
BLAST of CmaCh06G014580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201929|gb|KGN57062.1|3.8e-14886.59hypothetical protein Csa_3G151390 [Cucumis sativus][more]
gi|659076630|ref|XP_008438784.1|1.1e-14787.58PREDICTED: chromatin structure-remodeling complex protein SYD isoform X3 [Cucumi... [more]
gi|659076622|ref|XP_008438779.1|3.5e-14687.04PREDICTED: chromatin structure-remodeling complex protein SYD isoform X1 [Cucumi... [more]
gi|659076628|ref|XP_008438783.1|3.5e-14687.04PREDICTED: chromatin structure-remodeling complex protein SYD isoform X2 [Cucumi... [more]
gi|778678724|ref|XP_011651022.1|1.3e-14586.96PREDICTED: chromatin structure-remodeling complex protein SYD isoform X2 [Cucumi... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048583 regulation of response to stimulus
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0044699 single-organism process
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0042393 histone binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G014580.1CmaCh06G014580.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G014580Carg20146Silver-seed gourdcarcmaB1155
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G014580Cucurbita maxima (Rimu)cmacmaB284
CmaCh06G014580Cucurbita maxima (Rimu)cmacmaB369
CmaCh06G014580Cucurbita maxima (Rimu)cmacmaB554
CmaCh06G014580Cucurbita maxima (Rimu)cmacmaB555
CmaCh06G014580Cucumber (Gy14) v1cgycmaB0727
CmaCh06G014580Cucurbita moschata (Rifu)cmacmoB797
CmaCh06G014580Cucurbita moschata (Rifu)cmacmoB810
CmaCh06G014580Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G014580Cucurbita moschata (Rifu)cmacmoB837
CmaCh06G014580Cucurbita moschata (Rifu)cmacmoB838
CmaCh06G014580Wild cucumber (PI 183967)cmacpiB826
CmaCh06G014580Cucumber (Chinese Long) v2cmacuB814
CmaCh06G014580Melon (DHL92) v3.5.1cmameB747
CmaCh06G014580Melon (DHL92) v3.5.1cmameB763
CmaCh06G014580Watermelon (Charleston Gray)cmawcgB737
CmaCh06G014580Watermelon (Charleston Gray)cmawcgB745
CmaCh06G014580Watermelon (97103) v1cmawmB798
CmaCh06G014580Watermelon (97103) v1cmawmB811
CmaCh06G014580Cucurbita pepo (Zucchini)cmacpeB837
CmaCh06G014580Cucurbita pepo (Zucchini)cmacpeB810
CmaCh06G014580Cucurbita pepo (Zucchini)cmacpeB824
CmaCh06G014580Cucurbita pepo (Zucchini)cmacpeB853
CmaCh06G014580Bottle gourd (USVL1VR-Ls)cmalsiB741
CmaCh06G014580Bottle gourd (USVL1VR-Ls)cmalsiB757
CmaCh06G014580Cucumber (Gy14) v2cgybcmaB427
CmaCh06G014580Cucumber (Gy14) v2cgybcmaB857
CmaCh06G014580Cucumber (Gy14) v2cgybcmaB971
CmaCh06G014580Melon (DHL92) v3.6.1cmamedB846
CmaCh06G014580Melon (DHL92) v3.6.1cmamedB863
CmaCh06G014580Silver-seed gourdcarcmaB0094
CmaCh06G014580Silver-seed gourdcarcmaB0457
CmaCh06G014580Silver-seed gourdcarcmaB0849
CmaCh06G014580Cucumber (Chinese Long) v3cmacucB0965
CmaCh06G014580Cucumber (Chinese Long) v3cmacucB0999
CmaCh06G014580Watermelon (97103) v2cmawmbB856
CmaCh06G014580Watermelon (97103) v2cmawmbB865
CmaCh06G014580Wax gourdcmawgoB1002
CmaCh06G014580Wax gourdcmawgoB1003
CmaCh06G014580Wax gourdcmawgoB1006