CmaCh06G010740 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCTCCAAGCAAACGCCGAGAGATGGACTTGATGAAACTGTTAAGTCTCTTTTTCCTTTTCTGGGTTTATGAACTTGTTTCTTATTGACTGTTCTTGGATGGATTCTTCTGGGTTTTGACAGGATGATGAGCGATTACAAAGTGGAGATGATTAATGATGGGATGCAAGAGTTTTATGTAGATTTTCATGGACCCAGTGAGAGTAAATCTTCTAAACTTTGATCTATAAGTTTCATTACATTTTTGTTTTGTTTTGTTTGTTCATGTTCTTGTTCTTGATGAGTTTGGATCTCTGATGCATGTGGTTTTCTTTATTTGCTGAACTCTGGATTTGATTTGATCTATATATAATTTCCTAAGTTCACTGTTAGCAGATTTTGTCCTTTTTAGGCTTTCTTTTTTGGGTTTTCTCTCAAGGTTTTTAAAACGCGTTTGTTAGGGAGAGGTTTCTACACTCTTATAAGAAATGTTTCGTTCTATTCTCCAACCAGTTTGGACTATTACGAATGGTATAGAGCCGGACACTGGGCGGTGTGTCAGTGAGGACGTTGGCTCTCAAGGGGGTGGATTGTGAGATCCTACATTGGTTGGAGAGGGGAATGAAGCATTCCTTATAAAGGTGTGGAAGCCTCTCATGAGTAGACGCGTTTTAAAACCTTGAGGGGAAGCTCGAGAGGGAAAGCTCAAAGAGGACTATATCTTCGGGCGATGTGCCAATGAGGACACTGGGTCCCCAAGGAGGTGGATTGTGAAATCCCACATTGGTTGGAGAGGGGAACGAAGTATTCTTTATAAGGGTGTGGAAACCTCTCATTAGTAGACGCGTTTTAAAACCTTGAGGGGAAGCTCGAAAGGGAAAGCTCAAAGAGGGCTATATCATCGGGCGGTGTGCCAACGAGGATGCTGGGTCCACAAGGAGTGGACTGTGAGATCCTACATCGGTTGGAGAGGGGAATGAAGTATTCCTTATAAGGGTGTGGAAACCTCTCATTAGTAGACGCGTTTTAAAACTTTGAGGGGAAGCTCGAAAGGGAAAGCTCAAAGAGGGCTATATCATCGGGCGGTGTGCCAACGAGGATGCTGGGTCCACAAGGAGTGGACTGTGAGATCCTACATCGGTTGGAGAGGGGAACGAAGTATTCCTTATAAGGGTGTGGAAACCTCTCATTAGTAGACGCGTTTTAAAACCTTGAGGGAAAGCTCAAAGAGGGCTATATCATCGGGCGGTGTGCCAACGAGGACGCTGGGTCCACAAGGAGTGAACTGTGAGATCCTACATCGGTTGGAGAGGGGAACAAAGTATTCCTTATAAGGGTGTAGAAACCTCTCATTAGTAGACGCGTTTTAAAACCTTGAGGGAAAGCTCGAAAGGGAAAGCTCAAAGAGGGCTGTATCATCGGGCGGTGTGCCAACGAGGATGCTGGGTCCACAAGGAGTGAACTGTGAGATTCTACATCGGTTGGAGAGGGGAACGAAGTATTCCTTATAAGGGTGTGGAAACCTCTCATTAGTCGACACGTTTTAAGAACCTTGAGGGGAAGCCCGAAAGGGAAAACCCAAAAAAGACAATATTTGCTAGCGGTGGGCTTAGGCTGTGGACCTGTCGAGTGTTTTATCATCGGTTTTCAAACATATGAAGTTATGGTTTTGTATTTTCCTTCCTTTTTGTTCCTTTTTTAGTTGCTTTAGCTGATTTTGATCTAAATAATTTGAGAATCTGTTCTTCTGAATGTTCATAGAGTAACAGATTGTTTATCTGGTTATGTTGTGTATGGCTATACTCATTTGAGGGACCTAATTCTCCCATGTTCTTGGAGAACAGAAGGAAATGGATAAAGAAAAGTCACAATGTGATGGGTTGTCTGGCAGGTCCTTATCATGGAGGTGTATGGAGGATACGAGTCGAACTCCCCGATGCTTACCCGTATAAATCGCCTTCGATAGGATTCGTTAACAAAATTTACCACCCCAATGTTGATGAGATGTGAGTTCATCATGTGTTCTTAGCTTAAAATGAAGTCGGTTTCAAGTCGTTTCATGTTTGGTCTTTGTTTCAGGTCGGGTTCGGTTTGTTTGGACGTTATCAATCAAACTTGGAGTCCCATGTTCGGTAGGCAAACTTCTTGGTTTGTTGTTTATTTCCCGTCATCTCGTGTTTTTCGGATTAATCACGCATCTTTATATGCTATACTTTCAGATCTTGTAAATGTTTTTGAAGTGTTCCTACCACAACTTCTTTTGTATCCCAATCCATCAGATCCTTTGAATGGAGAGGCTGCAGCCTTGATGATGCGTGACCGTGTTGCTTATGATCAAAGAGTAAAAGGTATTGATTTTCTTGTTGTTTTCGTGTCGAAGCACGAACGTATCGGAAATGAGCTTTACGAATGATTTTTCTAAAGCTTGCTGTCCATGTATAGCATTAATTTGATAGTTGTGTCGGGATAAGATACTCTTTATCTTTGATGTTTGTTCTCCTATCCTACTAGCCAGCCCTCGCTAGACTTATGGGCGATCCCTAGACTCGTGATTTGTGAGATCCCATATCGGTTAGAGAGGGGAACGAAACATTCCTTATAAGAGGTGTAGAAACCTCTCCCTAGTAGATGCGTTTTAAAACCGTGAGGCTGACGGCGATACGTAACAGGCCAAAGTGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTATAAATGGTATTAGAGTTAGACACTGGACGGTGTGTTAGCAAGGACGTTGGGCCCCCAAGGGGTGTGGGGTGGATTGTGAGATCCCATATCGGTTGGAGAGGGGAACGAAACCTTCCTTATATGGGTGTGGAAACCTCTTCCTAGTAGACGCGTTTTAAAACTGTGAGGCTGACGACGATACGTAACAGGCTAAAGTTGAGAATATTTGCTAGCGGTGGACTTGAGTTGTTATAAATGATATTAGAGCTAGACACTGGACGGTGTGTCAGCGAGGACGCTAGGCGCCCAAGGGGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGGGGAACATAGCATTTCTTATATGGGTGTGAAAACCTCTTCCTAGTAGATGTGTTTTAAAACTGTGAGGTTGATGACGATACGTAACGGGCCCAAGTGGACAATATTTGTTAGCAGTGGACTTGAGCTGTTATAAATGATATTAGGGGTAGACATCGGGTGGTTTGCCTGCGAGGACGTTAGAACCCAAGGGGGGTAGATTATGAGATCTCACATTGGTTGGAGAGCGAAACAAAACCTTCCTTATAAGGGTGTGGAAACCTCTCTCTAGTAAACGCGTTTTAAAACCGTGAGATTGACGACAATGCGTAACGGGTCCAAATGATCTGTTAGCAGTGAGCTTGGGTTGTTAACATTAATAGCGAAGATAGCACATGTGAGTTCTCATGTTATCGTATCTTATTACAGAATACCGTGAAAGATACGCCAAGGCAGAAGAGATAGTAGCTGCACCCGACCAATCAAGCGACGAGGAACTAAGTGAAAATGAATCTGAGTCGAGCGACGAGGAAGTTGCAGGGAAAGCGGACCTCTAAGGGCTCATTTGAAGTAGCTTCCACTGTACAAATTGTGTTTCTGCTTGAATGCTTTCTTCTGTCATGTATATAAGAAAATGAATGCTTTTTGATGTTGCAATCATCATATGGTGTTAGATTATGTGAAGGAAGACTTTGTGATTCAAAACTTGCTATGCTTTGCTTAAGGTTAAAAGCTCTACAACTGACCTTTTAAACTAAAGTTCATATTCAATTTCAATATTACTTGTTTATGTTTTATTCTAA ATGTCTTCTCCAAGCAAACGCCGAGAGATGGACTTGATGAAACTGATGATGAGCGATTACAAAGTGGAGATGATTAATGATGGGATGCAAGAGTTTTATGTAGATTTTCATGGACCCAGTGAGAGTCCTTATCATGGAGGTGTATGGAGGATACGAGTCGAACTCCCCGATGCTTACCCGTATAAATCGCCTTCGATAGGATTCGTTAACAAAATTTACCACCCCAATGTTGATGAGATGTCGGGTTCGGTTTGTTTGGACGTTATCAATCAAACTTGGAGTCCCATGTTCGATCTTGTAAATGTTTTTGAAGTGTTCCTACCACAACTTCTTTTGTATCCCAATCCATCAGATCCTTTGAATGGAGAGGCTGCAGCCTTGATGATGCGTGACCGTGTTGCTTATGATCAAAGAGTAAAAGAATACCGTGAAAGATACGCCAAGGCAGAAGAGATAGTAGCTGCACCCGACCAATCAAGCGACGAGGAACTAAGTGAAAATGAATCTGAGTCGAGCGACGAGGAAGTTGCAGGGAAAGCGGACCTCTAAGGGCTCATTTGAAGTAGCTTCCACTGTACAAATTGTGTTTCTGCTTGAATGCTTTCTTCTGTCATGTATATAAGAAAATGAATGCTTTTTGATGTTGCAATCATCATATGGTGTTAGATTATGTGAAGGAAGACTTTGTGATTCAAAACTTGCTATGCTTTGCTTAAGGTTAAAAGCTCTACAACTGACCTTTTAAACTAAAGTTCATATTCAATTTCAATATTACTTGTTTATGTTTTATTCTAA ATGTCTTCTCCAAGCAAACGCCGAGAGATGGACTTGATGAAACTGATGATGAGCGATTACAAAGTGGAGATGATTAATGATGGGATGCAAGAGTTTTATGTAGATTTTCATGGACCCAGTGAGAGTCCTTATCATGGAGGTGTATGGAGGATACGAGTCGAACTCCCCGATGCTTACCCGTATAAATCGCCTTCGATAGGATTCGTTAACAAAATTTACCACCCCAATGTTGATGAGATGTCGGGTTCGGTTTGTTTGGACGTTATCAATCAAACTTGGAGTCCCATGTTCGATCTTGTAAATGTTTTTGAAGTGTTCCTACCACAACTTCTTTTGTATCCCAATCCATCAGATCCTTTGAATGGAGAGGCTGCAGCCTTGATGATGCGTGACCGTGTTGCTTATGATCAAAGAGTAAAAGAATACCGTGAAAGATACGCCAAGGCAGAAGAGATAGTAGCTGCACCCGACCAATCAAGCGACGAGGAACTAAGTGAAAATGAATCTGAGTCGAGCGACGAGGAAGTTGCAGGGAAAGCGGACCTCTAA MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVDFHGPSESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVKEYRERYAKAEEIVAAPDQSSDEELSENESESSDEEVAGKADL
BLAST of CmaCh06G010740 vs. Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 287.3 bits (734), Expect = 1.1e-76 Identity = 147/188 (78.19%), Postives = 162/188 (86.17%), Query Frame = 1
BLAST of CmaCh06G010740 vs. Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 283.5 bits (724), Expect = 1.6e-75 Identity = 145/186 (77.96%), Postives = 160/186 (86.02%), Query Frame = 1
BLAST of CmaCh06G010740 vs. Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 3.7e-75 Identity = 142/183 (77.60%), Postives = 159/183 (86.89%), Query Frame = 1
BLAST of CmaCh06G010740 vs. Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 273.5 bits (698), Expect = 1.7e-72 Identity = 133/184 (72.28%), Postives = 159/184 (86.41%), Query Frame = 1
BLAST of CmaCh06G010740 vs. Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ubc8 PE=3 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 5.5e-63 Identity = 116/182 (63.74%), Postives = 147/182 (80.77%), Query Frame = 1
BLAST of CmaCh06G010740 vs. TrEMBL
Match: W9QP82_9ROSA (Ubiquitin-conjugating enzyme E2 5 OS=Morus notabilis GN=L484_012389 PE=3 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 4.5e-88 Identity = 166/182 (91.21%), Postives = 175/182 (96.15%), Query Frame = 1
BLAST of CmaCh06G010740 vs. TrEMBL
Match: A0A067HEH4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030092mg PE=3 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 2.5e-86 Identity = 162/182 (89.01%), Postives = 174/182 (95.60%), Query Frame = 1
BLAST of CmaCh06G010740 vs. TrEMBL
Match: A5AU32_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00070 PE=3 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 2.5e-86 Identity = 164/182 (90.11%), Postives = 172/182 (94.51%), Query Frame = 1
BLAST of CmaCh06G010740 vs. TrEMBL
Match: V7AN49_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G100200g PE=3 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 9.3e-86 Identity = 161/182 (88.46%), Postives = 174/182 (95.60%), Query Frame = 1
BLAST of CmaCh06G010740 vs. TrEMBL
Match: I1MKV3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G035000 PE=3 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 1.2e-85 Identity = 161/182 (88.46%), Postives = 173/182 (95.05%), Query Frame = 1
BLAST of CmaCh06G010740 vs. TAIR10
Match: AT5G41340.1 (AT5G41340.1 ubiquitin conjugating enzyme 4) HSP 1 Score: 287.3 bits (734), Expect = 6.4e-78 Identity = 147/188 (78.19%), Postives = 162/188 (86.17%), Query Frame = 1
BLAST of CmaCh06G010740 vs. TAIR10
Match: AT1G63800.1 (AT1G63800.1 ubiquitin-conjugating enzyme 5) HSP 1 Score: 283.5 bits (724), Expect = 9.2e-77 Identity = 145/186 (77.96%), Postives = 160/186 (86.02%), Query Frame = 1
BLAST of CmaCh06G010740 vs. TAIR10
Match: AT2G46030.1 (AT2G46030.1 ubiquitin-conjugating enzyme 6) HSP 1 Score: 273.5 bits (698), Expect = 9.6e-74 Identity = 133/184 (72.28%), Postives = 159/184 (86.41%), Query Frame = 1
BLAST of CmaCh06G010740 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11) HSP 1 Score: 100.9 bits (250), Expect = 8.5e-22 Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 1
BLAST of CmaCh06G010740 vs. TAIR10
Match: AT5G56150.1 (AT5G56150.1 ubiquitin-conjugating enzyme 30) HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21 Identity = 45/121 (37.19%), Postives = 72/121 (59.50%), Query Frame = 1
BLAST of CmaCh06G010740 vs. NCBI nr
Match: gi|449432142|ref|XP_004133859.1| (PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus]) HSP 1 Score: 337.0 bits (863), Expect = 2.0e-89 Identity = 168/183 (91.80%), Postives = 179/183 (97.81%), Query Frame = 1
BLAST of CmaCh06G010740 vs. NCBI nr
Match: gi|659075220|ref|XP_008438028.1| (PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis melo]) HSP 1 Score: 335.5 bits (859), Expect = 5.8e-89 Identity = 168/183 (91.80%), Postives = 178/183 (97.27%), Query Frame = 1
BLAST of CmaCh06G010740 vs. NCBI nr
Match: gi|1009170954|ref|XP_015866477.1| (PREDICTED: ubiquitin-conjugating enzyme E2 4-like [Ziziphus jujuba]) HSP 1 Score: 334.7 bits (857), Expect = 9.9e-89 Identity = 166/182 (91.21%), Postives = 177/182 (97.25%), Query Frame = 1
BLAST of CmaCh06G010740 vs. NCBI nr
Match: gi|703067318|ref|XP_010087938.1| (Ubiquitin-conjugating enzyme E2 5 [Morus notabilis]) HSP 1 Score: 332.0 bits (850), Expect = 6.4e-88 Identity = 166/182 (91.21%), Postives = 175/182 (96.15%), Query Frame = 1
BLAST of CmaCh06G010740 vs. NCBI nr
Match: gi|225426200|ref|XP_002279927.1| (PREDICTED: ubiquitin-conjugating enzyme E2 4 isoform X1 [Vitis vinifera]) HSP 1 Score: 326.2 bits (835), Expect = 3.5e-86 Identity = 164/182 (90.11%), Postives = 172/182 (94.51%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|