Carg24655 (gene) Silver-seed gourd

Overview
NameCarg24655
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUbiquitin-conjugating enzyme, E2
LocationCucurbita_argyrosperma_scaffold_269 : 129537 .. 134190 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTCTCTCTCTCTCCTCTGTTATTTTCCCCTTCTTTTCTCTCTCTCTCTCTCTAGACTTGTGAAGAACCCTTTTAAGCTTTTTCATTTCAAATTTTGAAGCAAAAATTTCCGTTCATCTTTATTCAAAATCCAAAAGAAACCATGTCTTCTCCAAGCAAACGCCGAGAGATGGACTTGATGAAACTGTTAAGTCTCTTTTTCCTTTTCTGGGTTTATGAACTTGTTTCTTATTGACTGTTCTTGGATGGATTCTTCTGGGTTTTGACAGGATGATGAGCGATTACAAAGTGGAGATGATTAATGATGGGATGCAAGAGTTTTATGTAGAGTTTCATGGACCCAGTGAGAGTAAATCTTCAATACTCTGATCTAGAAGTTTCATTACATTTTTGTTTTGTTTTGTTTGTTCGTGTTTGTGTTCGTGTTCATGTTCTTGTTCTTGTTCTTGATGAGTTTGGATCTCTGATGCATGGGGTTTTCTGTATTTGCTGAACTCTGGATTTGATTTGATCTATATGTAATAGTCTATGTTAACGGTCAGCAGATATTGTTCTTTTTAGGCTTTCTTTTACGGCGTATGTTAGGGAGAGGTTTCCACACCCTTATAAGAAATGTTTTGTTCTATTCTCCAACCAGTTTGGGCTATTACAAATGGTATAGAGCTAGACACTAAGCGGTGTGTCAGTGAGGACGTTGGCCCCCAAGAAGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCATTAGTAGACGTGTTTTAAAACCTTGAGAGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACTATATCATCGGGTGGTGTGCCAATGAGGATGTTGGATCCACAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAATGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCATTAGTAGACGTGTTTTAAAACCTTGAGAGGAAGCCTGAAAGGGAAAACTCAAAGAGGACTATATCATCGGGTGGTGTGTCAATGAGGACGTTGGGTCCACAAGGGAGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTGTAAGGGTGTGGAAACCTCTCATTAGTAGACGTGTTTTAAAACCTTGAGAGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACTATCTCATCGGGTGGTGTGTCAATGAGGACGTTGGGTCCACAAGGGAGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTCGTTGTAAGGGTGTGGAAACCTCTCATTAGTAGACGTGTTTTAAAACCTTGAGAGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACTATCTCATCGGGTGGTGTGTCAATGAGGACGTTGGGTCCACAAGGGAGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTCGTTGTAAGGGTGTGGAAACCTCTCATTAGTAGACGTGTTTTAAAACCTTGAGAGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACTATATCATCGGGCGGTGTGCCAATGAGGACGCTGGGTTCACAACGGGGTGGACTGTGAGATCTCACATTGGTTGGAGAGGGAAATGAAGCAAGGGTGTGGAAACCTCTCATTAGTAGACGCGTTTTAAAACCTTGAGGGGAAGCCTGAAAGGGAAAGCTCAAAGAGGACTATATCATCGGGTGTGTGTCAATGAGGACGCTGGGTCCACAAGGGGGTGGACTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCACTCCTTATAAGGGTGTGAAAATCTCTCATTAGTAGACGCGTTTTAAGACTTTGAGGGGAAACTCTAAAGGGAAAGCTCAAAGAATACTATATCATCGGGCGGTGTGCCAATGAGGACGCTGGATCCACAAGGGGGTGGACTGTGAGATCCCATATCAGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCCAGTAGATGCGTTTTAAAAACCTTGAGGTGAAGCCCGAAAGGGAAAGCTCAAAAAGGACTATATCATCGAACGGTGTGCCAATGAGGACGTTGGGTCTACAAGGGAGTGGATTGTGAGATCCTACGTCTGTTGGAGAGGGGAACAAAACATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATACGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGAAAAACCCAAAGAGGACAATATTTGCTAGCGGTGGGCTTGGATTGTGGACCTGTCGAGTGTTTTATCATCGGTTCTCGAACATATGAAGTTATAGTTTAGTATTTGCCATCCTTTTTGTTCCTTTTTTTAGTTGCTTAAGCTGATGTTGATCTAAATAACGTGAGAATCTGTTCTTCTGAATGTTCATAGAGTAACAGGTTGTTTATCTGGTCATGTTGTGTATGGCTATACTCATTTGAGGGACCTAATTCTCCCATGTTCTTGGAGAACAGAAGGAAATGGATAAAGAAAAGTCACATTGTCATGGGTTGTCTGGCAGGTCCTTATCATGGAGGTGTATGGAGGATACGAGTCGAACTCCCGGACGCTTACCCGTATAAATCGCCTTCGATAGGATTCGTTAACAAAATTTACCACCCCAATGTTGATGAGATGTGAGTTCATCATGTGTTCTTAGCTTAAAATGAAGTCGGTTTCAGGTCGTTTCATGTTTGGTCTTTGTTTTAGGTCGGGTTCGGTTTGTTTGGACGTTATCAATCAAACTTGGAGTCCCATGTTCGGTAGGTGAACTTCTTGGTTTGTTGTTTATTTCCCGTCATCTCGTGTTTTTCGGATTAATCACGCATCTTTATATGCTATACTTTCAGATCTTGTAAATGTTTTTGAAGTGTTCCTACCACAACTTCTTTTGTATCCCAATCCATCAGATCCTTTGAATGGAGAGGCTGCAGCCTTGATGATGCGTGACCGTGTTGCTTATGATCAAAGAGTAAAAGGTATTGATTTTCTCGTTGTTTTTGTGCGTCGGAAACGAGCTTTACGAATGGTTTTTCTAATGCTTGCTGTCCATGTATAGCATTAATTTGATAGTTGTGTCGAACGTTTGGGATAGGATACTCTTTATCTTTGATGTTTGTTCCCTAGGCTCGTGATTTGTGAGATCCCACATTGGTTGGAGAGGAGAACGAAACATTCCTTATAAGGGTGTGGAAACGTCTCCCTAGTAGACGTGTTTTAAAATCGTGAGGCTGATGGCGATATGTAACGGGCCAAAGTGGACAATATCTGCTAGCGGTGGGCTTGGGCTATTATAAATGGTATTAGAGCTAGACACTGGATGGTGTGTTAGCAAGGACGTTGGGCCCCCAAGAGGGGTGCGGTGGATTGTGAGATCCCTTATCAGTTGGAGAGAGGAACGAAGCATTCCTTATATGGGTGTTGAAACCTCTTCCTAGTAGATGTGTTTTAAAACCGTGAGGCTGACGGCGATACGTAACGGGCCAAAGTGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTATAAATGGTATTAGAGCTAGACACTGGACAGTGTGTCAGCGAGGACGTTGGGCCTCCAAGGGGGTGGATTGTGAGATCTCACATCAGTTGGAGAGGGGAACAGAGCATTCCTTATATGGGTGTGGAAACCTCTTCCTAGTAGACGCGTTTTAAAACTGTGAGGCTGACGACAATACGTAACGGGCTAAAGTGGAGAATATCTGCTAGCGGTGGACTTGAGCTGATATAAATTTTATTAGAGCTAGACACTGGACAGTGTGTTAACGAGGACACTGGGCCCCCAAGGGGGGTGGATTGAGATCCCACCTCGGTTGGAAAGGGGAACGAAACATTCCTTATATGGGTGTGGAAACTTCTTCTTAGTATACGCGTTTTAAAACTGTGAGGCTGATGACGATATGTAACGGACTCAAGCGGACAATATTTGTTAGCAGTGGGCTTGAGCTGTTATAAATGGTATCAGAGGCAGACACCGGGCAGTTTGTCAGTGAGGACGTTGGAACCCGGGGGGTGGATTGTGAGATTTCACATTGGTTGGAGAGCGAAACGAAACCTTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAAACGCATTTTAAAACCGTGAGGCTGATGACAATACGTAACGGGCCCAAACGATCTGTTAGCGGTGGGCTTGGGTTGTTAACATTAATAGCAGAGATAGTACATATGAGTTCTCATCATATCTTATCTTATTACAGAATACCGTGAAAGATACGCCAAGGCAGAAGACATAGTAGCTGCACCCGACCAATCAAGCGACGAGGAACTAAGTGAAAATGAATCCGAGTCGAGCGAGGAGGAAGTTGCAGGGAAAGCGGACCTCTAAGGGCTCATTTGAAGTACCTTCCACTGTACAAATTGTGTCTCTGCTTGAATGCTTTCTCCTGTCATGTATATAAGAAAATGAATGCTCTTTTTACGTTGCAATCATCATATGGTGTTAGATTATGTCAAGGAAGGACTTGGTGATTCTAAACTTGTTATGCTTTGCTTACAACTGACCTTTTAAACTAAAGTTCATATTCAATTTCAATATTACTTGTTTATGCTTTATTCTAACAAAAAA

mRNA sequence

TCTCTCTCTCTCTCTCCTCTGTTATTTTCCCCTTCTTTTCTCTCTCTCTCTCTCTAGACTTGTGAAGAACCCTTTTAAGCTTTTTCATTTCAAATTTTGAAGCAAAAATTTCCGTTCATCTTTATTCAAAATCCAAAAGAAACCATGTCTTCTCCAAGCAAACGCCGAGAGATGGACTTGATGAAACTGATGATGAGCGATTACAAAGTGGAGATGATTAATGATGGGATGCAAGAGTTTTATGTAGAGTTTCATGGACCCAGTGAGAGTCCTTATCATGGAGGTGTATGGAGGATACGAGTCGAACTCCCGGACGCTTACCCGTATAAATCGCCTTCGATAGGATTCGTTAACAAAATTTACCACCCCAATGTTGATGAGATGTGAGTTCATCATGTGTTCTTAGCTTAAAATGAAGTCGGTTTCAGGTCGTTTCATGTTTGGTCTTTGTTTTAGGTCGGGTTCGGTTTGTTTGGACGTTATCAATCAAACTTGGAGTCCCATGTTCGATCTTGTAAATGTTTTTGAAGTGTTCCTACCACAACTTCTTTTGTATCCCAATCCATCAGATCCTTTGAATGGAGAGGCTGCAGCCTTGATGATGCGTGACCGTGTTGCTTATGATCAAAGAGTAAAAGAATACCGTGAAAGATACGCCAAGGCAGAAGACATAGTAGCTGCACCCGACCAATCAAGCGACGAGGAACTAAGTGAAAATGAATCCGAGTCGAGCGAGGAGGAAGTTGCAGGGAAAGCGGACCTCTAAGGGCTCATTTGAAGTACCTTCCACTGTACAAATTGTGTCTCTGCTTGAATGCTTTCTCCTGTCATGTATATAAGAAAATGAATGCTCTTTTTACGTTGCAATCATCATATGGTGTTAGATTATGTCAAGGAAGGACTTGGTGATTCTAAACTTGTTATGCTTTGCTTACAACTGACCTTTTAAACTAAAGTTCATATTCAATTTCAATATTACTTGTTTATGCTTTATTCTAACAAAAAA

Coding sequence (CDS)

ATGAAGTCGGTTTCAGGTCGTTTCATGTTTGGTCTTTGTTTTAGGTCGGGTTCGGTTTGTTTGGACGTTATCAATCAAACTTGGAGTCCCATGTTCGATCTTGTAAATGTTTTTGAAGTGTTCCTACCACAACTTCTTTTGTATCCCAATCCATCAGATCCTTTGAATGGAGAGGCTGCAGCCTTGATGATGCGTGACCGTGTTGCTTATGATCAAAGAGTAAAAGAATACCGTGAAAGATACGCCAAGGCAGAAGACATAGTAGCTGCACCCGACCAATCAAGCGACGAGGAACTAAGTGAAAATGAATCCGAGTCGAGCGAGGAGGAAGTTGCAGGGAAAGCGGACCTCTAA

Protein sequence

MKSVSGRFMFGLCFRSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKADL
Homology
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BLAST of Carg24655 vs. NCBI nr
Match: XP_022935469.1 (ubiquitin-conjugating enzyme E2 4-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 196.8 bits (499), Expect = 4.0e-47
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK
Sbjct: 45  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 104

Query: 76  EYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKADL 118
           EYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKADL
Sbjct: 105 EYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKADL 146

[Close]
BLAST of Carg24655 vs. NCBI nr
Match: XP_022935452.1 (ubiquitin-conjugating enzyme E2 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 196.8 bits (499), Expect = 4.0e-47
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK
Sbjct: 81  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 140

Query: 76  EYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKADL 118
           EYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKADL
Sbjct: 141 EYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKADL 182

[Close]
BLAST of Carg24655 vs. NCBI nr
Match: XP_023541017.1 (ubiquitin-conjugating enzyme E2 4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.7 bits (496), Expect = 9.0e-47
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK
Sbjct: 45  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 104

Query: 76  EYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKADL 118
           EYRERYAKAEDIVAAPDQSSDEELSENESESS+EEVAGKADL
Sbjct: 105 EYRERYAKAEDIVAAPDQSSDEELSENESESSDEEVAGKADL 146

[Close]
BLAST of Carg24655 vs. NCBI nr
Match: XP_023541016.1 (ubiquitin-conjugating enzyme E2 4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.7 bits (496), Expect = 9.0e-47
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK
Sbjct: 81  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 140

Query: 76  EYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKADL 118
           EYRERYAKAEDIVAAPDQSSDEELSENESESS+EEVAGKADL
Sbjct: 141 EYRERYAKAEDIVAAPDQSSDEELSENESESSDEEVAGKADL 182

[Close]
BLAST of Carg24655 vs. NCBI nr
Match: XP_022147339.1 (ubiquitin-conjugating enzyme E2 4 isoform X2 [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 3.9e-42
Identity = 92/101 (91.09%), Postives = 98/101 (97.03%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAY+QRVK
Sbjct: 60  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYEQRVK 119

Query: 76  EYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKAD 117
           EY ERYAK EDI+AAPD+SSDEELSE+ES+S +EEVAGKAD
Sbjct: 120 EYCERYAKPEDIIAAPDKSSDEELSEDESDSCDEEVAGKAD 160

[Close]
BLAST of Carg24655 vs. TAIR10
Match: AT5G41340.1 (ubiquitin conjugating enzyme 4)

HSP 1 Score: 132.5 bits (332), Expect = 1.7e-31
Identity = 63/68 (92.65%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPLNGEAAALMMRDR AY+QRVK
Sbjct: 81  SGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVK 140

Query: 76  EYRERYAK 84
           EY E+YAK
Sbjct: 141 EYCEKYAK 148

[Close]
BLAST of Carg24655 vs. TAIR10
Match: AT1G63800.1 (ubiquitin-conjugating enzyme 5)

HSP 1 Score: 125.2 bits (313), Expect = 2.7e-29
Identity = 67/104 (64.42%), Postives = 77/104 (74.04%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPLNGEAAALMMRDR  Y+QRVK
Sbjct: 81  SGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVK 140

Query: 76  EYRERYAKAE---DIVAAPDQSSDEELSENESESSEEEVAGKAD 117
           EY E+YAK     + +++ D         +  +  +  +AGK D
Sbjct: 141 EYCEKYAKPRADTEEMSSDDXXXXXXXXXDGDDEDDVAIAGKLD 184

[Close]
BLAST of Carg24655 vs. TAIR10
Match: AT2G46030.1 (ubiquitin-conjugating enzyme 6)

HSP 1 Score: 124.8 bits (312), Expect = 3.5e-29
Identity = 57/71 (80.28%), Postives = 65/71 (91.55%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SG+VCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDP NGEAA+L+MRDR AY+ +VK
Sbjct: 81  SGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVK 140

Query: 76  EYRERYAKAED 87
           EY E+YAK E+
Sbjct: 141 EYCEKYAKPEE 151

[Close]
BLAST of Carg24655 vs. TAIR10
Match: AT2G02760.1 (ubiquiting-conjugating enzyme 2)

HSP 1 Score: 56.2 bits (134), Expect = 1.5e-08
Identity = 24/67 (35.82%), Postives = 40/67 (59.70%), Query Frame = 0 

Query: 14  FRSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQR 73
           +  GS+CLD++   WSP++D+  +    +  LL  PNP+ P N EAA +    +  Y++R
Sbjct: 82  YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARMFSESKREYNRR 141

Query: 74  VKEYRER 81
           V+E  E+
Sbjct: 142 VREVVEQ 147

[Close]
BLAST of Carg24655 vs. TAIR10
Match: AT1G14400.1 (ubiquitin carrier protein 1)

HSP 1 Score: 54.7 bits (130), Expect = 4.5e-08
Identity = 23/67 (34.33%), Postives = 40/67 (59.70%), Query Frame = 0 

Query: 14  FRSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQR 73
           +  GS+CLD++   WSP++D+  +    +  LL  PNP+ P N EAA +    +  Y++R
Sbjct: 82  YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARMYSESKREYNRR 141

Query: 74  VKEYRER 81
           V++  E+
Sbjct: 142 VRDVVEQ 147

[Close]
BLAST of Carg24655 vs. Swiss-Prot
Match: sp|P16577|UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.0e-30
Identity = 63/72 (87.50%), Postives = 68/72 (94.44%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVN+FEVFLPQLLLYPNPSDPLNGEAA+LMMRD+ AY+ +VK
Sbjct: 81  SGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVK 140

Query: 76  EYRERYAKAEDI 88
           EY ERYAK EDI
Sbjct: 141 EYCERYAKPEDI 152

[Close]
BLAST of Carg24655 vs. Swiss-Prot
Match: sp|P42748|UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 3.1e-30
Identity = 63/68 (92.65%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPLNGEAAALMMRDR AY+QRVK
Sbjct: 81  SGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVK 140

Query: 76  EYRERYAK 84
           EY E+YAK
Sbjct: 141 EYCEKYAK 148

[Close]
BLAST of Carg24655 vs. Swiss-Prot
Match: sp|P42749|UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 4.9e-28
Identity = 67/104 (64.42%), Postives = 77/104 (74.04%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPLNGEAAALMMRDR  Y+QRVK
Sbjct: 81  SGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVK 140

Query: 76  EYRERYAKAE---DIVAAPDQSSDEELSENESESSEEEVAGKAD 117
           EY E+YAK     + +++ D         +  +  +  +AGK D
Sbjct: 141 EYCEKYAKPRADTEEMSSDDXXXXXXXXXDGDDEDDVAIAGKLD 184

[Close]
BLAST of Carg24655 vs. Swiss-Prot
Match: sp|P42750|UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 6.4e-28
Identity = 57/71 (80.28%), Postives = 65/71 (91.55%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SG+VCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDP NGEAA+L+MRDR AY+ +VK
Sbjct: 81  SGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVK 140

Query: 76  EYRERYAKAED 87
           EY E+YAK E+
Sbjct: 141 EYCEKYAKPEE 151

[Close]
BLAST of Carg24655 vs. Swiss-Prot
Match: sp|Q9P7R4|UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc8 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.0e-25
Identity = 59/101 (58.42%), Postives = 74/101 (73.27%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFD++N+FEVFLPQLL YPN SDPLNGEAAAL++R+   Y  +V+
Sbjct: 81  SGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTYYAKVR 140

Query: 76  EYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKAD 117
           +Y  RYA  ED     + SSD++   +    S +E+AG  D
Sbjct: 141 DYIARYANKEDADITLNDSSDDDTMSSIDTESGDEIAGPMD 181

[Close]
BLAST of Carg24655 vs. TrEMBL
Match: tr|A0A2I4FU58|A0A2I4FU58_9ROSI (ubiquitin-conjugating enzyme E2 4-like OS=Juglans regia OX=51240 GN=LOC109002049 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.6e-39
Identity = 88/102 (86.27%), Postives = 96/102 (94.12%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDR AY+QRVK
Sbjct: 81  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRAAYEQRVK 140

Query: 76  EYRERYAKAEDIVAAPDQ-SSDEELSENESESSEEEVAGKAD 117
           EY E+YAK EDI A P++ SSDEELS+NES+SS+E+VAGKAD
Sbjct: 141 EYCEKYAKPEDIGAVPEEKSSDEELSDNESDSSDEQVAGKAD 182

[Close]
BLAST of Carg24655 vs. TrEMBL
Match: tr|W9QP82|W9QP82_9ROSA (Ubiquitin-conjugating enzyme E2 5 OS=Morus notabilis OX=981085 GN=L484_012389 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.0e-38
Identity = 87/102 (85.29%), Postives = 95/102 (93.14%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDR AY+QRVK
Sbjct: 81  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRAAYEQRVK 140

Query: 76  EYRERYAKAEDIVA-APDQSSDEELSENESESSEEEVAGKAD 117
           EYRE+YAK EDI A A D+SSDEELSE+ES+S +E+V G+AD
Sbjct: 141 EYREKYAKPEDIGATAKDKSSDEELSEDESDSGDEQVVGQAD 182

[Close]
BLAST of Carg24655 vs. TrEMBL
Match: tr|A0A2J6K4X9|A0A2J6K4X9_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_3X6320 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.3e-37
Identity = 87/102 (85.29%), Postives = 92/102 (90.20%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNG+AAALMMRDR AY+Q+VK
Sbjct: 81  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGDAAALMMRDRTAYEQKVK 140

Query: 76  EYRERYAKAEDIVAAP-DQSSDEELSENESESSEEEVAGKAD 117
           EY ERYAK ED  A P +QSSDEELSE E  SS+EEVAGKAD
Sbjct: 141 EYCERYAKPEDAGAVPEEQSSDEELSEAEYASSDEEVAGKAD 182

[Close]
BLAST of Carg24655 vs. TrEMBL
Match: tr|M5XDV0|M5XDV0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G173000 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.6e-37
Identity = 84/102 (82.35%), Postives = 95/102 (93.14%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDR AY+QRVK
Sbjct: 81  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRAAYEQRVK 140

Query: 76  EYRERYAKAEDIVAAP-DQSSDEELSENESESSEEEVAGKAD 117
           E+ ++YAK EDI A P D+SSDEELSE+ES+S +++VAG+AD
Sbjct: 141 EFCQKYAKPEDIGAVPEDKSSDEELSEDESDSCDDQVAGQAD 182

[Close]
BLAST of Carg24655 vs. TrEMBL
Match: tr|A0A251QIA9|A0A251QIA9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G173000 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.6e-37
Identity = 84/102 (82.35%), Postives = 95/102 (93.14%), Query Frame = 0 

Query: 16  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVK 75
           SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDR AY+QRVK
Sbjct: 69  SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRAAYEQRVK 128

Query: 76  EYRERYAKAEDIVAAP-DQSSDEELSENESESSEEEVAGKAD 117
           E+ ++YAK EDI A P D+SSDEELSE+ES+S +++VAG+AD
Sbjct: 129 EFCQKYAKPEDIGAVPEDKSSDEELSEDESDSCDDQVAGQAD 170

The following BLAST results are available for this feature:
BLAST of Carg24655 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022935469.14.0e-47100.00ubiquitin-conjugating enzyme E2 4-like isoform X3 [Cucurbita moschata][more]
XP_022935452.14.0e-47100.00ubiquitin-conjugating enzyme E2 4-like isoform X1 [Cucurbita moschata][more]
XP_023541017.19.0e-4799.02ubiquitin-conjugating enzyme E2 4-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023541016.19.0e-4799.02ubiquitin-conjugating enzyme E2 4-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022147339.13.9e-4291.09ubiquitin-conjugating enzyme E2 4 isoform X2 [Momordica charantia][more]
BLAST of Carg24655 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G41340.11.7e-3192.65ubiquitin conjugating enzyme 4[more]
AT1G63800.12.7e-2964.42ubiquitin-conjugating enzyme 5[more]
AT2G46030.13.5e-2980.28ubiquitin-conjugating enzyme 6[more]
AT2G02760.11.5e-0835.82ubiquiting-conjugating enzyme 2[more]
AT1G14400.14.5e-0834.33ubiquitin carrier protein 1[more]
BLAST of Carg24655 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P16577|UBC4_WHEAT1.0e-3087.50Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1... [more]
sp|P42748|UBC4_ARATH3.1e-3092.65Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 S... [more]
sp|P42749|UBC5_ARATH4.9e-2864.42Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 S... [more]
sp|P42750|UBC6_ARATH6.4e-2880.28Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 S... [more]
sp|Q9P7R4|UBC8_SCHPO3.0e-2558.42Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATC... [more]
BLAST of Carg24655 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2I4FU58|A0A2I4FU58_9ROSI4.6e-3986.27ubiquitin-conjugating enzyme E2 4-like OS=Juglans regia OX=51240 GN=LOC109002049... [more]
tr|W9QP82|W9QP82_9ROSA3.0e-3885.29Ubiquitin-conjugating enzyme E2 5 OS=Morus notabilis OX=981085 GN=L484_012389 PE... [more]
tr|A0A2J6K4X9|A0A2J6K4X9_LACSA3.3e-3785.29Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_3X6320 PE=3 SV=1[more]
tr|M5XDV0|M5XDV0_PRUPE5.6e-3782.35Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G173000 PE=3 SV=1[more]
tr|A0A251QIA9|A0A251QIA9_PRUPE5.6e-3782.35Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G173000 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24655-RACarg24655-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..117
NoneNo IPR availablePANTHERPTHR43946:SF3SUBFAMILY NOT NAMEDcoord: 16..116
NoneNo IPR availablePANTHERPTHR43946FAMILY NOT NAMEDcoord: 16..116
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 10..87
e-value: 1.2E-22
score: 82.0
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILYSSF54495UBC-likecoord: 6..83
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 15..77
e-value: 1.1E-13
score: 51.0
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 1..72
score: 15.087