CmaCh06G010000 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGTGGTTAATTTGTTGATAGCAGTTCAAAGTAAATTAGGGGAGAGAGGTGTTCATATGCTTTGAGGGTTTGAGCTTCAAAACATCACCTGAATTCTCTCCCTTTCTTCCTCCTTCGTTTTGCAATATTTTCTGCTCAATTCCGACTTTCTTCAATCAACCATATTGAATGTGTCGTGATTCATTGTAAAAGTTGAAGATTTCAGGGTTTACCGGCGCACCCAGATAGCAAAAACTCTATCAGGTTTAAGGGCCGGCGATTTTCGTTCATGTAATCAATCTATAACGCGGATTAATTTTGTTCTTTGTTGTTTTTGACGAACTTGGGGTTTTTTTTTGGTTCACATTAAGAGTTTTCAATCAATTGTGGGGGTAATCATAACTTGGTTCTTCGGAGGGCCAGGGTTTTGAAGTAATAGCATAGGGTTCGCGTTGGCTAGCGCGTTAAAGAATTGGGGATTTGGGTTTAAAGAGTATGGTTTCGTGTTTGCCTGTGTTTCCATTGTGTTGTCAGGTCAGGGGTGGATTTGGGTTTAAAGAGTATGGTTTCGTGTTTGCCTGTGTTTCCATTGTGTTGTCAGGTCAGGGGTAGCGGTATCTGAGTTTCTGGGATTGGGTAGAACATGAATCGTAGGGTGCGTAGGAAGGTGAGTAGAAAAGGGAAGGAGAAGCTGATTTTGCCAAGCTACCTTGAAATTGAATGTGAGATAGCTGATTTGTAGAAAAGGGAAGGAGAAGCTGATTTTGCCAAGCTACCTTGAAATTGAATGTGAGATAGCTGATTTGGATTTGAAACAGACAGTGGATTGGACTTGTTTGCCTGATGATACAGTCATTCAGCTGTTCTCTTGTTTGAATTATCGTGACCGGGCGAATTTGTCATCGACGTGTAGAACATGGAGAGTTCTTGGTTTATCTTCGTGCTTGTGGACTTCGTTTGATCTTCGAGTCGACGTGTAG ATGCTTGTGGGTTTACCGGCGCACCCAGATAGCAAAAACTCTATCAGGTTTAAGGGCCGGCGATTTTCGTTCATAAAAGGGAAGGAGAAGCTGATTTTGCCAAGCTACCTTGAAATTGAATGTGAGATAGCTGATTTGGATTTGAAACAGACAGTGGATTGGACTTGTTTGCCTGATGATACAGTCATTCAGCTGTTCTCTTGTTTGAATTATCGTGACCGGGCGAATTTGTCATCGACGTGTAGAACATGGAGAGTTCTTGGTTTATCTTCGTGCTTGTGGACTTCGTTTGATCTTCGAGTCGACGTGTAG ATGCTTGTGGGTTTACCGGCGCACCCAGATAGCAAAAACTCTATCAGGTTTAAGGGCCGGCGATTTTCGTTCATAAAAGGGAAGGAGAAGCTGATTTTGCCAAGCTACCTTGAAATTGAATGTGAGATAGCTGATTTGGATTTGAAACAGACAGTGGATTGGACTTGTTTGCCTGATGATACAGTCATTCAGCTGTTCTCTTGTTTGAATTATCGTGACCGGGCGAATTTGTCATCGACGTGTAGAACATGGAGAGTTCTTGGTTTATCTTCGTGCTTGTGGACTTCGTTTGATCTTCGAGTCGACGTGTAG MLVGLPAHPDSKNSIRFKGRRFSFIKGKEKLILPSYLEIECEIADLDLKQTVDWTCLPDDTVIQLFSCLNYRDRANLSSTCRTWRVLGLSSCLWTSFDLRVDV
BLAST of CmaCh06G010000 vs. Swiss-Prot
Match: ADLO1_ARATH (Protein ARABIDILLO 1 OS=Arabidopsis thaliana GN=FBX5 PE=1 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.6e-19 Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 1
BLAST of CmaCh06G010000 vs. Swiss-Prot
Match: ADLO2_ARATH (Protein ARABIDILLO 2 OS=Arabidopsis thaliana GN=At3g60350 PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.7e-16 Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 1
BLAST of CmaCh06G010000 vs. TrEMBL
Match: A0A0A0L302_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118100 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 9.8e-32 Identity = 68/75 (90.67%), Postives = 70/75 (93.33%), Query Frame = 1
BLAST of CmaCh06G010000 vs. TrEMBL
Match: W9QSQ1_9ROSA (Protein ARABIDILLO 1 OS=Morus notabilis GN=L484_021830 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.0e-25 Identity = 57/75 (76.00%), Postives = 64/75 (85.33%), Query Frame = 1
BLAST of CmaCh06G010000 vs. TrEMBL
Match: M5VUY2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001073mg PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 4.4e-24 Identity = 55/75 (73.33%), Postives = 62/75 (82.67%), Query Frame = 1
BLAST of CmaCh06G010000 vs. TrEMBL
Match: M5W7G2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001073mg PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 4.4e-24 Identity = 55/75 (73.33%), Postives = 62/75 (82.67%), Query Frame = 1
BLAST of CmaCh06G010000 vs. TrEMBL
Match: B9RD12_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1608630 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 5.8e-24 Identity = 55/75 (73.33%), Postives = 62/75 (82.67%), Query Frame = 1
BLAST of CmaCh06G010000 vs. TAIR10
Match: AT2G44900.1 (AT2G44900.1 ARABIDILLO-1) HSP 1 Score: 96.7 bits (239), Expect = 9.1e-21 Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 1
BLAST of CmaCh06G010000 vs. TAIR10
Match: AT3G60350.1 (AT3G60350.1 ARABIDILLO-2) HSP 1 Score: 86.7 bits (213), Expect = 9.4e-18 Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 1
BLAST of CmaCh06G010000 vs. NCBI nr
Match: gi|659074835|ref|XP_008437822.1| (PREDICTED: protein ARABIDILLO 1-like [Cucumis melo]) HSP 1 Score: 146.7 bits (369), Expect = 2.2e-32 Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 1
BLAST of CmaCh06G010000 vs. NCBI nr
Match: gi|449431988|ref|XP_004133782.1| (PREDICTED: protein ARABIDILLO 1-like [Cucumis sativus]) HSP 1 Score: 144.1 bits (362), Expect = 1.4e-31 Identity = 68/75 (90.67%), Postives = 70/75 (93.33%), Query Frame = 1
BLAST of CmaCh06G010000 vs. NCBI nr
Match: gi|703072494|ref|XP_010089299.1| (Protein ARABIDILLO 1 [Morus notabilis]) HSP 1 Score: 124.0 bits (310), Expect = 1.5e-25 Identity = 57/75 (76.00%), Postives = 64/75 (85.33%), Query Frame = 1
BLAST of CmaCh06G010000 vs. NCBI nr
Match: gi|1009143855|ref|XP_015889482.1| (PREDICTED: protein ARABIDILLO 1 [Ziziphus jujuba]) HSP 1 Score: 121.7 bits (304), Expect = 7.5e-25 Identity = 56/75 (74.67%), Postives = 63/75 (84.00%), Query Frame = 1
BLAST of CmaCh06G010000 vs. NCBI nr
Match: gi|694441950|ref|XP_009347693.1| (PREDICTED: protein ARABIDILLO 1-like [Pyrus x bretschneideri]) HSP 1 Score: 119.0 bits (297), Expect = 4.8e-24 Identity = 56/75 (74.67%), Postives = 63/75 (84.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |