CmaCh06G006570 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G006570
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMitochondrial import inner membrane translocase subunit tim22
LocationCma_Chr06 : 3259003 .. 3262876 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATCCGGGAAAGTGATGACACAAACGACAGGTGTGAAAAAAGGCTAAATAATCGCTATCCGTTCATCAAAGAAGAACAAAGAAAGCTTCGAATTCTGCCTTCGGAAGATTGAGATTGAAAAAGGTGTTTAGCAGAGCAGAGTGAGGAAGATAGTGAATCGCGGCCATGGCGGATTCTTCAAGGGACGAGTCATCTGACGCTGAGCTCGAAACCAATCATTCAGACAGCCCTAATTCCTCCGACGCCATAGTTCCCTCCTCTTTTGGTGGCCCTGCTCTTTGTCTTTTCCGGTTTGCCGGTGACTCCGCTGCCGGAGCCTTCATGGGCTCCATTTTCGGCTACGGTCTCTTTCTTTCTCTTTGTGTTAAGAATGTCTCCTTTGTTTTTCGTTTTACATGTTTTGATTGCTCGTTTAGTTTTTGAAATTGGGATTAGCTATGAAAATAAACGAGTTAGTAACCATTGATAGCTAATGCGGTTTAGTAATCTGCTTTAACAGACTAATTATACCAATAGATGGAGAATAAACGCCTAATTTTCTTAACATAGGAAGCCAAGCTGAAGCAGTAAGGGTTTAGTAATCATATTAGCAAGTTGAAACTGGCTCCAAAGTGGAAGGAGCTTAATAAAACCATTCAAAGTAAGAGCACAAAAACAGGACGAGATCAAGGTATGTTAATATCACCTAGTAATATCAGTATGCGTACGATTGGACTTCCAAGAAACCATGGAATTCCAATCATTGGATTGCAAGACTCTAGAGCCAATCAACATCCACAAAAGCTTTTATGAACAACTATTAGATGAGTTGTGAGTGGACGAGCAGTAACACAATGAACAGGGGAAGATATATTTGGCACAAATGTGTACCTATGGTTGTTGATAAGAGAATAATGAATTGAAGAATCATCAACACTTAGGATCACCGTTGGGTACATCGAACTTCAAATTTTTATTACTAGGTATAAAAATTGGGTTAGAGTTGCCGGACTAAGCATAACTCAATTGATTAAGGCATATATTGTTTACTAACAGGTCATAGGTTTGAAGCGTTGTGACACATGAAAAAACAAAAGGGAAAAAATTGACTTAAGTCGAAGAAGCCAATGTTCTCCAATAGTTGCAAACAATAGTTTCTCAAAGAAAGGAAGATGCGACGAGTCTTAAACTACTCGATGCTGAAAAAATAACCGAACAAACCAAGATCTTTAAGCTGAAACTAACTATGGAGCAAAAGTTTAACCGTATAATAGTATCTTGACAAGGACCACTTATGGTAATATCATCAGTGTACACCGGTCACCAACAATGCTACATAGGAGCAAGCTGAACCATGAGTAAGCAAGGACTAATCGGCCGTGGACTAATAAAAAACAAGGGAAAGTAGTACATGAGAAAGAGGCGTATATACCTCCTCAAACATGACTAACTTCAAGTTGTCCAGGTTTCACTAACAAAATTGATTGGAAAACATGTTCAGGAAGAGCAACAAGCATGTTTAGAATGATTCTCTAAGATTGAACAAGTGTTATAGAATACCTGATATGATTTGCACTAGAATCAATTATTCATGTACTAATCGAGTCTCTTTAGAACCACAGTTTTAAAAATATGATCTGCTATATGAGATATGAAGAAGAACTAGCCATATCCTCATTATTGAAGGAAGATAATGATAGATGAGTCTGAAACGGGTGAGTTCCAGTTTATCGAATAGGAAATGTGTGCAAATTGGGGAAGATTTGCGGGCTTCCTTCTCTCCCGAGACTCACCCCAGTCCAATATTACCAAAAAAAAATGTACTAATGGTGTTTCCTACTCCTCATATGTCAGCTATCTAACTAACTCACATTCCATGGGACCCACACTACATTATGCATAATACTAGTGAGTAGGGCCACCCCTCACTTCATTACTGAAAAACATGTTCAGAACTGGGGTCTATCAGAAACGTAGTTATTAGCTGATTATCTTGAATAAGAGTAAGACTACTAAAAAAACTCAAGCTCTGGATTCTTTCAGGAGCCGTACCGATCACATGATTAGTGTAAAAACCTTTTTAAGTATTTAGTAGATTAGGTGAAGAACATTTTTCTTTCTTAGGTGATTTATCAAAATTAGAAGGTTGCTGTTTCTTAATAATCCATAAATTAAGAAAGGAAGGGGCTCTAAATTGATCGTTGAATGAACAATTTGTTGTTGCTTCTCTTATATAACCAGCAAAAAAGCCTTATTTGTTGGCAGTCCGATTGTTAGCATAGGTATCATCGAATCATTAAGAAAAATTATGATACCAATTTTTATTTTCAGTTTTTCTAGTTAGCCATGTACCAATAAAATTTAATGCATTCTGAGTATCCTTCAGGTTCGGGATTGATTAAGAAGAAGGGCTTCAAAGGATCATTTGCAGAGGCTGGATCTTGTGCCAAGGTGTGATTATTGAAAAAGAATACTGGAGTGTTTTACAATGAATAAATTTCATTACTGGTTACTGCTCTTTGAGGCTTTTTAAGGACTAATTTTGTTCGCTAATCTTTTGTTGATTTCAATTTATGAATCAGACATTTGCAGTTTTGTCTGGGGTGCACAGTTTGGTTGTTTGCATGTTAAAGAGATTGAGAGGAAAGGATGATGGTGTGGTAACTTCGCTTCGGAAATATTAGTATTTGGCTGTTTCAATCTCCTTTCTAATGATGTTAACTCATTTTTGTAGTTATTAATGCTGGGGTGGCCGGATGCTGCACTGGTTTAGCTCTAAGTTTTCCAGGTAGTAACCTTTTCGACTGGCATCTCACTTCATTCTGTGATTACGTTTTTGGTGGCATCTGGCCTCTTTCTACGTTTTAATTCCATTCGAACACGTAAGGAAGTAGATAACACCTTATATGCCTCAGTTTCCACCATGGTAGCTCGTTGGCTCAAGCAACTCTTCAATTAATTCATTACGACTTGATTGACGTTGTGTTATTCTGAATATTGCTTTGAGTTAAAGAAGTTGAGTGTGAGTTCCCACATTGGTTGGAGAGGGAAACGAAGCATTCCTTATAAGGACGTGGAAACCTCCTCCTAGTGGACGCATTTTAAAACCTTGAAGGGAAGTTCGGAAGGGAAAATCCAAAGAAGACAATATTTGCTAGCAGTTGACTTGGACGGTTACAGTGAGACATACATCACTGCTCCTTTGAACTTCTGTATGTAAATAGAGGCTTTTGTTTCACAGGCGCTCCACAGGCTCTTCTTCAGAGTTGCATCACTTTTGGAGCGTTTTCCTTTATACTTGAGGGACTTAACAAGCAGCAGCCAGCGTTGGCTCATCCCGATTTCTCGAGAAAGAGAAGTAATATGGAGAGAAATTGTCCTCCCTTAGTTTTGCCGCTTCAATTTGCCATTCCAGTTGAACTTAAAGGTGCATTTTCTGCATTCTGCAAGTCCTTGGAGAAGAGCAGGAGGAGCAGCTGGTAAGACCTCATCCAGCTTTCTTTTAACATCTTTTGCACTAGACAGTCGTATTAATGCAAATTTGTAGCTAATGTTTAAAAGAGTTTGTTGCAATTTGAATGTAATTGTGGACTTTTGGATGGCTTATTTGAAGCAATGTTTTGCTATCTTGTTCGTCAATGCGGTCTAGTTTCTGGCTAAGTTACAGATACTTGTTATGCGTTCATACTTTTTTATATATATATTTTGTGTGTATATACATATATGTTTGGATGTATATTATGTTATGTATGATGTATAAAATGTACATACATGAATAGACATTTTGGCGACTTCGGTGCATATGTTACAAACAAAGCTACTTTTAAGTACTTCGAGTGGAGTTTCAATTATTTTTGGATATATTACAAATATTGTTGTTAATATTAATTGTCT

mRNA sequence

TTATCCGGGAAAGTGATGACACAAACGACAGGTGTGAAAAAAGGCTAAATAATCGCTATCCGTTCATCAAAGAAGAACAAAGAAAGCTTCGAATTCTGCCTTCGGAAGATTGAGATTGAAAAAGGTGTTTAGCAGAGCAGAGTGAGGAAGATAGTGAATCGCGGCCATGGCGGATTCTTCAAGGGACGAGTCATCTGACGCTGAGCTCGAAACCAATCATTCAGACAGCCCTAATTCCTCCGACGCCATAGTTCCCTCCTCTTTTGGTGGCCCTGCTCTTTGTCTTTTCCGGTTTGCCGGTGACTCCGCTGCCGGAGCCTTCATGGGCTCCATTTTCGGCTACGGTTCGGGATTGATTAAGAAGAAGGGCTTCAAAGGATCATTTGCAGAGGCTGGATCTTGTGCCAAGACATTTGCAGTTTTGTCTGGGGTGCACAGTTTGGTTGTTTGCATGTTAAAGAGATTGAGAGGAAAGGATGATGTTATTAATGCTGGGGTGGCCGGATGCTGCACTGGTTTAGCTCTAAGTTTTCCAGGCGCTCCACAGGCTCTTCTTCAGAGTTGCATCACTTTTGGAGCGTTTTCCTTTATACTTGAGGGACTTAACAAGCAGCAGCCAGCGTTGGCTCATCCCGATTTCTCGAGAAAGAGAAGTAATATGGAGAGAAATTGTCCTCCCTTAGTTTTGCCGCTTCAATTTGCCATTCCAGTTGAACTTAAAGGTGCATTTTCTGCATTCTGCAAGTCCTTGGAGAAGAGCAGGAGGAGCAGCTGGTAAGACCTCATCCAGCTTTCTTTTAACATCTTTTGCACTAGACAGTCGTATTAATGCAAATTTGTAGCTAATGTTTAAAAGAGTTTGTTGCAATTTGAATGTAATTGTGGACTTTTGGATGGCTTATTTGAAGCAATGTTTTGCTATCTTGTTCGTCAATGCGGTCTAGTTTCTGGCTAAGTTACAGATACTTGTTATGCGTTCATACTTTTTTATATATATATTTTGTGTGTATATACATATATGTTTGGATGTATATTATGTTATGTATGATGTATAAAATGTACATACATGAATAGACATTTTGGCGACTTCGGTGCATATGTTACAAACAAAGCTACTTTTAAGTACTTCGAGTGGAGTTTCAATTATTTTTGGATATATTACAAATATTGTTGTTAATATTAATTGTCT

Coding sequence (CDS)

ATGGCGGATTCTTCAAGGGACGAGTCATCTGACGCTGAGCTCGAAACCAATCATTCAGACAGCCCTAATTCCTCCGACGCCATAGTTCCCTCCTCTTTTGGTGGCCCTGCTCTTTGTCTTTTCCGGTTTGCCGGTGACTCCGCTGCCGGAGCCTTCATGGGCTCCATTTTCGGCTACGGTTCGGGATTGATTAAGAAGAAGGGCTTCAAAGGATCATTTGCAGAGGCTGGATCTTGTGCCAAGACATTTGCAGTTTTGTCTGGGGTGCACAGTTTGGTTGTTTGCATGTTAAAGAGATTGAGAGGAAAGGATGATGTTATTAATGCTGGGGTGGCCGGATGCTGCACTGGTTTAGCTCTAAGTTTTCCAGGCGCTCCACAGGCTCTTCTTCAGAGTTGCATCACTTTTGGAGCGTTTTCCTTTATACTTGAGGGACTTAACAAGCAGCAGCCAGCGTTGGCTCATCCCGATTTCTCGAGAAAGAGAAGTAATATGGAGAGAAATTGTCCTCCCTTAGTTTTGCCGCTTCAATTTGCCATTCCAGTTGAACTTAAAGGTGCATTTTCTGCATTCTGCAAGTCCTTGGAGAAGAGCAGGAGGAGCAGCTGGTAA

Protein sequence

MADSSRDESSDAELETNHSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGSGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQFAIPVELKGAFSAFCKSLEKSRRSSW
Homology
[Close]
BLAST of CmaCh06G006570 vs. Swiss-Prot
Match: TI222_ARATH (Mitochondrial import inner membrane translocase subunit TIM22-2 OS=Arabidopsis thaliana GN=TIM22-2 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 8.0e-63
Identity = 130/199 (65.33%), Postives = 154/199 (77.39%), Query Frame = 1 

Query: 3   DSSRDESSDAELETNHSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGSG 62
           D + D  S+   + + +   +SS A+V  +   PA+CLFRFAGD+A GA MGSIFGYGSG
Sbjct: 13  DGNLDSDSNLNTDGDEATDNDSSKALV--TIPAPAVCLFRFAGDAAGGAVMGSIFGYGSG 72

Query: 63  LIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSF 122
           L KKKGFKGSFA+AG  AKTFAVLSGVHSLVVC+LK++RGKDD IN GVAGCCTGLALSF
Sbjct: 73  LFKKKGFKGSFADAGQSAKTFAVLSGVHSLVVCLLKQIRGKDDAINVGVAGCCTGLALSF 132

Query: 123 PGAPQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNM-ERNCPPLVLPLQFAIP 182
           PGAPQALLQSC+TFGAFSFILEGLNK+Q ALAH    R ++ + + +   L L L   IP
Sbjct: 133 PGAPQALLQSCLTFGAFSFILEGLNKRQTALAHSVSLRHQTGLFQDHHRALPLSLALPIP 192

Query: 183 VELKGAFSAFCKSLEKSRR 201
            E+KGAFS+FCKSL K R+
Sbjct: 193 EEIKGAFSSFCKSLAKPRK 209

[Close]
BLAST of CmaCh06G006570 vs. Swiss-Prot
Match: TI223_ARATH (Mitochondrial import inner membrane translocase subunit TIM22-3 OS=Arabidopsis thaliana GN=TIM22-3 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.6e-61
Identity = 129/201 (64.18%), Postives = 155/201 (77.11%), Query Frame = 1 

Query: 3   DSSRDESSDAELETNH-SDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGS 62
           D+S D  S    + N  +D  +SS A+V      PA+CL RFAGD+A+GAFMGS+FGYGS
Sbjct: 13  DTSLDSDSKPNRDANDMTDHDSSSKALV---IPAPAVCLVRFAGDAASGAFMGSVFGYGS 72

Query: 63  GLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALS 122
           GL KKKGFKGSF +AG  AKTFAVLSGVHSLVVC+LK++RGKDD IN GVAGCCTGLALS
Sbjct: 73  GLFKKKGFKGSFVDAGQSAKTFAVLSGVHSLVVCLLKQIRGKDDAINVGVAGCCTGLALS 132

Query: 123 FPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQFAIP 182
           FPGAPQA+LQSC+TFGAFSFILEGLNK+Q ALAH    R+++   ++  PL   L  AIP
Sbjct: 133 FPGAPQAMLQSCLTFGAFSFILEGLNKRQTALAHSVSFRQQTRSPQHDLPL---LSLAIP 192

Query: 183 V--ELKGAFSAFCKSLEKSRR 201
           +  E+KGAFS+FC SL K ++
Sbjct: 193 IHDEIKGAFSSFCNSLTKPKK 207

[Close]
BLAST of CmaCh06G006570 vs. Swiss-Prot
Match: TIM22_ASPOR (Mitochondrial import inner membrane translocase subunit tim22 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=tim22 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.2e-07
Identity = 27/79 (34.18%), Postives = 44/79 (55.70%), Query Frame = 1 

Query: 66  KKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSFPGA 125
           ++GFK   + + S AK F ++  ++S   C ++ LR K+D+ N+ ++GC TG  L     
Sbjct: 97  RRGFKDMGSRSWSSAKNFGIVGALYSGTECCVEGLRAKNDLSNSVISGCITGGILGAKAG 156

Query: 126 PQALLQSCITFGAFSFILE 145
           PQA    C  F AFS  ++
Sbjct: 157 PQAAAAGCAGFAAFSAAID 175

[Close]
BLAST of CmaCh06G006570 vs. Swiss-Prot
Match: TIM22_NEUCR (Mitochondrial import inner membrane translocase subunit tim22 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tim22 PE=3 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 8.1e-07
Identity = 31/79 (39.24%), Postives = 42/79 (53.16%), Query Frame = 1 

Query: 66  KKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSFPGA 125
           K GFK     + S AK FA +  + S + C ++ LR K+D+ N   AGC TG  L+  G 
Sbjct: 106 KHGFKDMGQRSYSTAKNFAKVGALFSGIECGIEGLRAKNDLGNGVAAGCLTGAILAKNGG 165

Query: 126 PQALLQSCITFGAFSFILE 145
           PQA    C  F AFS  ++
Sbjct: 166 PQAAAVGCAGFAAFSAAID 184

[Close]
BLAST of CmaCh06G006570 vs. TrEMBL
Match: A0A0A0L4X2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G062610 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 4.8e-91
Identity = 181/205 (88.29%), Postives = 186/205 (90.73%), Query Frame = 1 

Query: 1   MADSSRDESSDAE-LETNHSDSPNSSDAIVPSS-FGGPALCLFRFAGDSAAGAFMGSIFG 60
           MADSS+D S DA+ L TN SDSPNSSDAIVPS  F GPALCLFRFAGDS AGAFMGSIFG
Sbjct: 1   MADSSKDVSPDADNLLTNSSDSPNSSDAIVPSPPFTGPALCLFRFAGDSVAGAFMGSIFG 60

Query: 61  YGSGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGL 120
           YGSGLIKK GFKGSFAEAGSCAKTFAVLSGVHSLV CMLK LRGKDDVIN GVAGCCTGL
Sbjct: 61  YGSGLIKKNGFKGSFAEAGSCAKTFAVLSGVHSLVACMLKTLRGKDDVINHGVAGCCTGL 120

Query: 121 ALSFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQF 180
           ALSFPGAPQALLQSCITFGAFSFILE LNK+QPALAHP FSR RS MERN PPLVLPLQF
Sbjct: 121 ALSFPGAPQALLQSCITFGAFSFILESLNKRQPALAHPIFSRTRSEMERNRPPLVLPLQF 180

Query: 181 AIPVELKGAFSAFCKSLEKSRRSSW 204
           A+PVELKGAFS+FCKSLEKSRR SW
Sbjct: 181 ALPVELKGAFSSFCKSLEKSRRCSW 205

[Close]
BLAST of CmaCh06G006570 vs. TrEMBL
Match: M5WV89_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011495mg PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.2e-73
Identity = 146/198 (73.74%), Postives = 169/198 (85.35%), Query Frame = 1 

Query: 7   DESSDAELETNHS--DSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGSGLI 66
           D  +D EL+TN +   +PNSS+++VP+S  GPA+CL RFAGDSA GAFMGS+FGYG+GL+
Sbjct: 11  DTDTDTELDTNPNLNPNPNSSNSLVPASSNGPAVCLLRFAGDSAGGAFMGSVFGYGAGLV 70

Query: 67  KKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSFPG 126
           KKKGFKGSFAEAGS AKTFAVLSGVHSLVVC+LKRLRGKDDVINAGVAGCCTGLALSFPG
Sbjct: 71  KKKGFKGSFAEAGSYAKTFAVLSGVHSLVVCILKRLRGKDDVINAGVAGCCTGLALSFPG 130

Query: 127 APQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQFAIPVEL 186
           APQALLQSC+TFGAFSFI+EGLNKQQPALAHP   RK+S      PPLVLPLQ ++P EL
Sbjct: 131 APQALLQSCLTFGAFSFIIEGLNKQQPALAHPLSVRKKS---EQLPPLVLPLQLSLPGEL 190

Query: 187 KGAFSAFCKSLEKSRRSS 203
           K  F++FC SL+  + +S
Sbjct: 191 KAGFTSFCNSLKNHKGTS 205

[Close]
BLAST of CmaCh06G006570 vs. TrEMBL
Match: W9RCA8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009525 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.5e-73
Identity = 144/191 (75.39%), Postives = 163/191 (85.34%), Query Frame = 1 

Query: 7   DESSDAELETNHSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGSGLIKK 66
           D  +D +   N   + N S+A+VPS   GPA+CL RFAGDSAAGAFMGSIFGYG+GL+KK
Sbjct: 11  DSDTDFDTFPNPKPTSNPSNALVPS---GPAVCLLRFAGDSAAGAFMGSIFGYGAGLVKK 70

Query: 67  KGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSFPGAP 126
           KGFKGSF+EAGS AKTFAVLSGVHSLVVC+LKR+RGKDDVINAGVAGCCTGLALSFPGAP
Sbjct: 71  KGFKGSFSEAGSSAKTFAVLSGVHSLVVCILKRIRGKDDVINAGVAGCCTGLALSFPGAP 130

Query: 127 QALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQFAIPVELKG 186
           QALLQSC+TFGAFSFI+EGLNKQQPALAHP  +R +S      PP+ LPLQF +P ELKG
Sbjct: 131 QALLQSCLTFGAFSFIIEGLNKQQPALAHPFSARTKSQRHDIHPPMALPLQFPLPNELKG 190

Query: 187 AFSAFCKSLEK 198
           AFS+FCKSL+K
Sbjct: 191 AFSSFCKSLQK 198

[Close]
BLAST of CmaCh06G006570 vs. TrEMBL
Match: A0A0B0NT47_GOSAR (Mitochondrial import inner membrane translocase subunit tim22 OS=Gossypium arboreum GN=F383_19253 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 6.6e-72
Identity = 148/198 (74.75%), Postives = 165/198 (83.33%), Query Frame = 1 

Query: 5   SRDESSDAELETNHSDSPNSSDAIVP--SSFGGPALCLFRFAGDSAAGAFMGSIFGYGSG 64
           S + S+++++ETN   +PNSS AI+P  S+   PA+CLF+FAGDSAAGAFMGSIFGYGSG
Sbjct: 6   SPNTSAESDIETN--PNPNSSKAIIPTPSNSNSPAVCLFQFAGDSAAGAFMGSIFGYGSG 65

Query: 65  LIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSF 124
           LIKKKGFKGSF EAGS AKTFAVLSGVHSLVVC LKRLRGKDDVINAGVAGCCTGLALSF
Sbjct: 66  LIKKKGFKGSFVEAGSYAKTFAVLSGVHSLVVCFLKRLRGKDDVINAGVAGCCTGLALSF 125

Query: 125 PGAPQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQFAIPV 184
           PGAPQALLQSC+TFGAFSFI+EGLNKQQPALAH   +R  S   +   PL LPL   IP 
Sbjct: 126 PGAPQALLQSCLTFGAFSFIIEGLNKQQPALAHSFSARNESAHHKGPHPLALPLSIPIPD 185

Query: 185 ELKGAFSAFCKSLEKSRR 201
           ELKGAFS+FCKSL K  +
Sbjct: 186 ELKGAFSSFCKSLVKPNK 201

[Close]
BLAST of CmaCh06G006570 vs. TrEMBL
Match: A0A0D2SEU7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G156500 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 8.6e-72
Identity = 148/198 (74.75%), Postives = 165/198 (83.33%), Query Frame = 1 

Query: 5   SRDESSDAELETNHSDSPNSSDAIV--PSSFGGPALCLFRFAGDSAAGAFMGSIFGYGSG 64
           S + S+ +++ETN   +PNSS AI+  PS+   PA+CLF+FAGDSAAGAFMGSIFGYGSG
Sbjct: 31  SPNTSAGSDIETN--PNPNSSKAIILTPSNSNSPAVCLFQFAGDSAAGAFMGSIFGYGSG 90

Query: 65  LIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSF 124
           LIKKKGFKGSF EAGS AKTFAVLSGVHSLVVC LKRLRGKDDVINAGVAGCCTGLALSF
Sbjct: 91  LIKKKGFKGSFVEAGSYAKTFAVLSGVHSLVVCFLKRLRGKDDVINAGVAGCCTGLALSF 150

Query: 125 PGAPQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQFAIPV 184
           PGAPQALLQSC+TFGAFSFI+EGLNKQQPALAH   +R +S   +   PL LPL   IP 
Sbjct: 151 PGAPQALLQSCLTFGAFSFIIEGLNKQQPALAHSFSARNKSAHHKGPRPLALPLSIPIPD 210

Query: 185 ELKGAFSAFCKSLEKSRR 201
           ELKGAFS+FCKSL K  +
Sbjct: 211 ELKGAFSSFCKSLVKPNK 226

[Close]
BLAST of CmaCh06G006570 vs. TAIR10
Match: AT4G26670.1 (AT4G26670.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein)

HSP 1 Score: 241.5 bits (615), Expect = 4.5e-64
Identity = 130/199 (65.33%), Postives = 154/199 (77.39%), Query Frame = 1 

Query: 3   DSSRDESSDAELETNHSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGSG 62
           D + D  S+   + + +   +SS A+V  +   PA+CLFRFAGD+A GA MGSIFGYGSG
Sbjct: 13  DGNLDSDSNLNTDGDEATDNDSSKALV--TIPAPAVCLFRFAGDAAGGAVMGSIFGYGSG 72

Query: 63  LIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSF 122
           L KKKGFKGSFA+AG  AKTFAVLSGVHSLVVC+LK++RGKDD IN GVAGCCTGLALSF
Sbjct: 73  LFKKKGFKGSFADAGQSAKTFAVLSGVHSLVVCLLKQIRGKDDAINVGVAGCCTGLALSF 132

Query: 123 PGAPQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNM-ERNCPPLVLPLQFAIP 182
           PGAPQALLQSC+TFGAFSFILEGLNK+Q ALAH    R ++ + + +   L L L   IP
Sbjct: 133 PGAPQALLQSCLTFGAFSFILEGLNKRQTALAHSVSLRHQTGLFQDHHRALPLSLALPIP 192

Query: 183 VELKGAFSAFCKSLEKSRR 201
            E+KGAFS+FCKSL K R+
Sbjct: 193 EEIKGAFSSFCKSLAKPRK 209

[Close]
BLAST of CmaCh06G006570 vs. TAIR10
Match: AT5G55510.1 (AT5G55510.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein)

HSP 1 Score: 236.5 bits (602), Expect = 1.4e-62
Identity = 129/201 (64.18%), Postives = 155/201 (77.11%), Query Frame = 1 

Query: 3   DSSRDESSDAELETNH-SDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGS 62
           D+S D  S    + N  +D  +SS A+V      PA+CL RFAGD+A+GAFMGS+FGYGS
Sbjct: 13  DTSLDSDSKPNRDANDMTDHDSSSKALV---IPAPAVCLVRFAGDAASGAFMGSVFGYGS 72

Query: 63  GLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALS 122
           GL KKKGFKGSF +AG  AKTFAVLSGVHSLVVC+LK++RGKDD IN GVAGCCTGLALS
Sbjct: 73  GLFKKKGFKGSFVDAGQSAKTFAVLSGVHSLVVCLLKQIRGKDDAINVGVAGCCTGLALS 132

Query: 123 FPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQFAIP 182
           FPGAPQA+LQSC+TFGAFSFILEGLNK+Q ALAH    R+++   ++  PL   L  AIP
Sbjct: 133 FPGAPQAMLQSCLTFGAFSFILEGLNKRQTALAHSVSFRQQTRSPQHDLPL---LSLAIP 192

Query: 183 V--ELKGAFSAFCKSLEKSRR 201
           +  E+KGAFS+FC SL K ++
Sbjct: 193 IHDEIKGAFSSFCNSLTKPKK 207

[Close]
BLAST of CmaCh06G006570 vs. NCBI nr
Match: gi|778675921|ref|XP_011650497.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-2-like [Cucumis sativus])

HSP 1 Score: 342.0 bits (876), Expect = 6.9e-91
Identity = 181/205 (88.29%), Postives = 186/205 (90.73%), Query Frame = 1 

Query: 1   MADSSRDESSDAE-LETNHSDSPNSSDAIVPSS-FGGPALCLFRFAGDSAAGAFMGSIFG 60
           MADSS+D S DA+ L TN SDSPNSSDAIVPS  F GPALCLFRFAGDS AGAFMGSIFG
Sbjct: 1   MADSSKDVSPDADNLLTNSSDSPNSSDAIVPSPPFTGPALCLFRFAGDSVAGAFMGSIFG 60

Query: 61  YGSGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGL 120
           YGSGLIKK GFKGSFAEAGSCAKTFAVLSGVHSLV CMLK LRGKDDVIN GVAGCCTGL
Sbjct: 61  YGSGLIKKNGFKGSFAEAGSCAKTFAVLSGVHSLVACMLKTLRGKDDVINHGVAGCCTGL 120

Query: 121 ALSFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQF 180
           ALSFPGAPQALLQSCITFGAFSFILE LNK+QPALAHP FSR RS MERN PPLVLPLQF
Sbjct: 121 ALSFPGAPQALLQSCITFGAFSFILESLNKRQPALAHPIFSRTRSEMERNRPPLVLPLQF 180

Query: 181 AIPVELKGAFSAFCKSLEKSRRSSW 204
           A+PVELKGAFS+FCKSLEKSRR SW
Sbjct: 181 ALPVELKGAFSSFCKSLEKSRRCSW 205

[Close]
BLAST of CmaCh06G006570 vs. NCBI nr
Match: gi|659096622|ref|XP_008449195.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-2, partial [Cucumis melo])

HSP 1 Score: 332.8 bits (852), Expect = 4.2e-88
Identity = 164/171 (95.91%), Postives = 168/171 (98.25%), Query Frame = 1 

Query: 33  FGGPALCLFRFAGDSAAGAFMGSIFGYGSGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSL 92
           F GPALCLFRFAGDSAAGAFMGS+FGYGSGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSL
Sbjct: 11  FTGPALCLFRFAGDSAAGAFMGSVFGYGSGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSL 70

Query: 93  VVCMLKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCITFGAFSFILEGLNKQQPA 152
           VVCMLKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCITFGAFSFILEGLNKQQPA
Sbjct: 71  VVCMLKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCITFGAFSFILEGLNKQQPA 130

Query: 153 LAHPDFSRKRSNMERNCPPLVLPLQFAIPVELKGAFSAFCKSLEKSRRSSW 204
           LAHP FSR RSN+ERNCPPLVLPLQFA+PVELKGAFSAFCKSLEKSR+SSW
Sbjct: 131 LAHPVFSRTRSNIERNCPPLVLPLQFALPVELKGAFSAFCKSLEKSRKSSW 181

[Close]
BLAST of CmaCh06G006570 vs. NCBI nr
Match: gi|595873886|ref|XP_007212059.1| (hypothetical protein PRUPE_ppa011495mg [Prunus persica])

HSP 1 Score: 284.3 bits (726), Expect = 1.7e-73
Identity = 146/198 (73.74%), Postives = 169/198 (85.35%), Query Frame = 1 

Query: 7   DESSDAELETNHS--DSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGSGLI 66
           D  +D EL+TN +   +PNSS+++VP+S  GPA+CL RFAGDSA GAFMGS+FGYG+GL+
Sbjct: 11  DTDTDTELDTNPNLNPNPNSSNSLVPASSNGPAVCLLRFAGDSAGGAFMGSVFGYGAGLV 70

Query: 67  KKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSFPG 126
           KKKGFKGSFAEAGS AKTFAVLSGVHSLVVC+LKRLRGKDDVINAGVAGCCTGLALSFPG
Sbjct: 71  KKKGFKGSFAEAGSYAKTFAVLSGVHSLVVCILKRLRGKDDVINAGVAGCCTGLALSFPG 130

Query: 127 APQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQFAIPVEL 186
           APQALLQSC+TFGAFSFI+EGLNKQQPALAHP   RK+S      PPLVLPLQ ++P EL
Sbjct: 131 APQALLQSCLTFGAFSFIIEGLNKQQPALAHPLSVRKKS---EQLPPLVLPLQLSLPGEL 190

Query: 187 KGAFSAFCKSLEKSRRSS 203
           K  F++FC SL+  + +S
Sbjct: 191 KAGFTSFCNSLKNHKGTS 205

[Close]
BLAST of CmaCh06G006570 vs. NCBI nr
Match: gi|703101838|ref|XP_010097293.1| (hypothetical protein L484_009525 [Morus notabilis])

HSP 1 Score: 282.3 bits (721), Expect = 6.5e-73
Identity = 144/191 (75.39%), Postives = 163/191 (85.34%), Query Frame = 1 

Query: 7   DESSDAELETNHSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGSGLIKK 66
           D  +D +   N   + N S+A+VPS   GPA+CL RFAGDSAAGAFMGSIFGYG+GL+KK
Sbjct: 11  DSDTDFDTFPNPKPTSNPSNALVPS---GPAVCLLRFAGDSAAGAFMGSIFGYGAGLVKK 70

Query: 67  KGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSFPGAP 126
           KGFKGSF+EAGS AKTFAVLSGVHSLVVC+LKR+RGKDDVINAGVAGCCTGLALSFPGAP
Sbjct: 71  KGFKGSFSEAGSSAKTFAVLSGVHSLVVCILKRIRGKDDVINAGVAGCCTGLALSFPGAP 130

Query: 127 QALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQFAIPVELKG 186
           QALLQSC+TFGAFSFI+EGLNKQQPALAHP  +R +S      PP+ LPLQF +P ELKG
Sbjct: 131 QALLQSCLTFGAFSFIIEGLNKQQPALAHPFSARTKSQRHDIHPPMALPLQFPLPNELKG 190

Query: 187 AFSAFCKSLEK 198
           AFS+FCKSL+K
Sbjct: 191 AFSSFCKSLQK 198

[Close]
BLAST of CmaCh06G006570 vs. NCBI nr
Match: gi|728834813|gb|KHG14256.1| (mitochondrial import inner membrane translocase subunit tim22 [Gossypium arboreum])

HSP 1 Score: 278.5 bits (711), Expect = 9.4e-72
Identity = 148/198 (74.75%), Postives = 165/198 (83.33%), Query Frame = 1 

Query: 5   SRDESSDAELETNHSDSPNSSDAIVP--SSFGGPALCLFRFAGDSAAGAFMGSIFGYGSG 64
           S + S+++++ETN   +PNSS AI+P  S+   PA+CLF+FAGDSAAGAFMGSIFGYGSG
Sbjct: 6   SPNTSAESDIETN--PNPNSSKAIIPTPSNSNSPAVCLFQFAGDSAAGAFMGSIFGYGSG 65

Query: 65  LIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSF 124
           LIKKKGFKGSF EAGS AKTFAVLSGVHSLVVC LKRLRGKDDVINAGVAGCCTGLALSF
Sbjct: 66  LIKKKGFKGSFVEAGSYAKTFAVLSGVHSLVVCFLKRLRGKDDVINAGVAGCCTGLALSF 125

Query: 125 PGAPQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQFAIPV 184
           PGAPQALLQSC+TFGAFSFI+EGLNKQQPALAH   +R  S   +   PL LPL   IP 
Sbjct: 126 PGAPQALLQSCLTFGAFSFIIEGLNKQQPALAHSFSARNESAHHKGPHPLALPLSIPIPD 185

Query: 185 ELKGAFSAFCKSLEKSRR 201
           ELKGAFS+FCKSL K  +
Sbjct: 186 ELKGAFSSFCKSLVKPNK 201

The following BLAST results are available for this feature:
BLAST of CmaCh06G006570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TI222_ARATH8.0e-6365.33Mitochondrial import inner membrane translocase subunit TIM22-2 OS=Arabidopsis t... [more]
TI223_ARATH2.6e-6164.18Mitochondrial import inner membrane translocase subunit TIM22-3 OS=Arabidopsis t... [more]
TIM22_ASPOR6.2e-0734.18Mitochondrial import inner membrane translocase subunit tim22 OS=Aspergillus ory... [more]
TIM22_NEUCR8.1e-0739.24Mitochondrial import inner membrane translocase subunit tim22 OS=Neurospora cras... [more]
BLAST of CmaCh06G006570 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4X2_CUCSA4.8e-9188.29Uncharacterized protein OS=Cucumis sativus GN=Csa_3G062610 PE=4 SV=1[more]
M5WV89_PRUPE1.2e-7373.74Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011495mg PE=4 SV=1[more]
W9RCA8_9ROSA4.5e-7375.39Uncharacterized protein OS=Morus notabilis GN=L484_009525 PE=4 SV=1[more]
A0A0B0NT47_GOSAR6.6e-7274.75Mitochondrial import inner membrane translocase subunit tim22 OS=Gossypium arbor... [more]
A0A0D2SEU7_GOSRA8.6e-7274.75Uncharacterized protein OS=Gossypium raimondii GN=B456_013G156500 PE=4 SV=1[more]
BLAST of CmaCh06G006570 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G26670.14.5e-6465.33 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/... [more]
AT5G55510.11.4e-6264.18 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/... [more]
BLAST of CmaCh06G006570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778675921|ref|XP_011650497.1|6.9e-9188.29PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-2-like ... [more]
gi|659096622|ref|XP_008449195.1|4.2e-8895.91PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-2, part... [more]
gi|595873886|ref|XP_007212059.1|1.7e-7373.74hypothetical protein PRUPE_ppa011495mg [Prunus persica][more]
gi|703101838|ref|XP_010097293.1|6.5e-7375.39hypothetical protein L484_009525 [Morus notabilis][more]
gi|728834813|gb|KHG14256.1|9.4e-7274.75mitochondrial import inner membrane translocase subunit tim22 [Gossypium arboreu... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003397Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045039 protein import into mitochondrial inner membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0042721 mitochondrial inner membrane protein insertion complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G006570.1CmaCh06G006570.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003397Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24PFAMPF02466Tim17coord: 39..140
score: 1.3
NoneNo IPR availablePANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 1..203
score: 3.0
NoneNo IPR availablePANTHERPTHR14110:SF1MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22-2-RELATEDcoord: 1..203
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G006570ClCG10G004660Watermelon (Charleston Gray)cmawcgB730
CmaCh06G006570CmoCh06G006640Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G006570Cp4.1LG08g08530Cucurbita pepo (Zucchini)cmacpeB852
CmaCh06G006570Bhi11G000399Wax gourdcmawgoB0995
CmaCh06G006570Carg23561Silver-seed gourdcarcmaB0013
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G006570Watermelon (97103) v1cmawmB783
CmaCh06G006570Cucurbita pepo (Zucchini)cmacpeB814
CmaCh06G006570Bottle gourd (USVL1VR-Ls)cmalsiB767
CmaCh06G006570Cucumber (Gy14) v2cgybcmaB438
CmaCh06G006570Melon (DHL92) v3.6.1cmamedB869
CmaCh06G006570Silver-seed gourdcarcmaB0821
CmaCh06G006570Cucumber (Chinese Long) v3cmacucB0975
CmaCh06G006570Watermelon (97103) v2cmawmbB845
CmaCh06G006570Wax gourdcmawgoB0988
CmaCh06G006570Cucurbita maxima (Rimu)cmacmaB354
CmaCh06G006570Cucumber (Gy14) v1cgycmaB0033
CmaCh06G006570Cucurbita moschata (Rifu)cmacmoB804
CmaCh06G006570Wild cucumber (PI 183967)cmacpiB838
CmaCh06G006570Cucumber (Chinese Long) v2cmacuB825
CmaCh06G006570Melon (DHL92) v3.5.1cmameB764
CmaCh06G006570Watermelon (Charleston Gray)cmawcgB727