CmaCh06G004830 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAAGAAAAGGATACCGAGTTTGAAGAAATTGGTTAAGACGAACAAGCATCGACCCGGAAAATGTATACTAGCATCAAAGATGGCAGCAAGTAGTGGTCGGAACACGACGCCGAGAGGGTGTGTGGTTTTGTATGTCGGAGAAGAATATCGGAGATTTGTGGTACCGACCAAGTTTCTTTGTCATCCACTCTTCAAGATGGTGTTGGATAAAGCCTACAACGAGTTTGGGTTTGATCAAAGAAGTGGTCTCGTGGTTCCTTGCAATGCTTTTGCTTTTCAAGAGATTTTGAATACTATTGAAGCTAATCGCGGTAGCTTTCACTTTGGGGAACATGTTCATGAGTTTGTTTGA ATGTTGAAGAAAAGGATACCGAGTTTGAAGAAATTGGTTAAGACGAACAAGCATCGACCCGGAAAATGTATACTAGCATCAAAGATGGCAGCAAGTAGTGGTCGGAACACGACGCCGAGAGGGTGTGTGGTTTTGTATGTCGGAGAAGAATATCGGAGATTTGTGGTACCGACCAAGTTTCTTTGTCATCCACTCTTCAAGATGGTGTTGGATAAAGCCTACAACGAGTTTGGGTTTGATCAAAGAAGTGGTCTCGTGGTTCCTTGCAATGCTTTTGCTTTTCAAGAGATTTTGAATACTATTGAAGCTAATCGCGGTAGCTTTCACTTTGGGGAACATGTTCATGAGTTTGTTTGA ATGTTGAAGAAAAGGATACCGAGTTTGAAGAAATTGGTTAAGACGAACAAGCATCGACCCGGAAAATGTATACTAGCATCAAAGATGGCAGCAAGTAGTGGTCGGAACACGACGCCGAGAGGGTGTGTGGTTTTGTATGTCGGAGAAGAATATCGGAGATTTGTGGTACCGACCAAGTTTCTTTGTCATCCACTCTTCAAGATGGTGTTGGATAAAGCCTACAACGAGTTTGGGTTTGATCAAAGAAGTGGTCTCGTGGTTCCTTGCAATGCTTTTGCTTTTCAAGAGATTTTGAATACTATTGAAGCTAATCGCGGTAGCTTTCACTTTGGGGAACATGTTCATGAGTTTGTTTGA MLKKRIPSLKKLVKTNKHRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRSGLVVPCNAFAFQEILNTIEANRGSFHFGEHVHEFV
BLAST of CmaCh06G004830 vs. Swiss-Prot
Match: SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.4e-11 Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 1
BLAST of CmaCh06G004830 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.5e-10 Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 1
BLAST of CmaCh06G004830 vs. Swiss-Prot
Match: SAU41_ARATH (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana GN=SAUR41 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.6e-10 Identity = 26/66 (39.39%), Postives = 43/66 (65.15%), Query Frame = 1
BLAST of CmaCh06G004830 vs. Swiss-Prot
Match: SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana GN=SAUR72 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 7.8e-10 Identity = 31/95 (32.63%), Postives = 57/95 (60.00%), Query Frame = 1
BLAST of CmaCh06G004830 vs. Swiss-Prot
Match: SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana GN=SAUR40 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 6.6e-09 Identity = 24/68 (35.29%), Postives = 45/68 (66.18%), Query Frame = 1
BLAST of CmaCh06G004830 vs. TrEMBL
Match: A0A0A0LAX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G777530 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 3.5e-41 Identity = 87/120 (72.50%), Postives = 97/120 (80.83%), Query Frame = 1
BLAST of CmaCh06G004830 vs. TrEMBL
Match: D7TJ88_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g03120 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 3.2e-26 Identity = 68/126 (53.97%), Postives = 82/126 (65.08%), Query Frame = 1
BLAST of CmaCh06G004830 vs. TrEMBL
Match: A0A059A5M7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02555 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 4.1e-26 Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 1
BLAST of CmaCh06G004830 vs. TrEMBL
Match: A0A059A4M5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02026 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 5.4e-26 Identity = 66/128 (51.56%), Postives = 83/128 (64.84%), Query Frame = 1
BLAST of CmaCh06G004830 vs. TrEMBL
Match: V7BJR9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G227100g PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 7.0e-26 Identity = 65/126 (51.59%), Postives = 83/126 (65.87%), Query Frame = 1
BLAST of CmaCh06G004830 vs. TAIR10
Match: AT2G36210.1 (AT2G36210.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 90.9 bits (224), Expect = 5.7e-19 Identity = 55/135 (40.74%), Postives = 77/135 (57.04%), Query Frame = 1
BLAST of CmaCh06G004830 vs. TAIR10
Match: AT5G20810.2 (AT5G20810.2 SAUR-like auxin-responsive protein family ) HSP 1 Score: 79.7 bits (195), Expect = 1.3e-15 Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 1
BLAST of CmaCh06G004830 vs. TAIR10
Match: AT3G43120.1 (AT3G43120.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 76.3 bits (186), Expect = 1.5e-14 Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 1
BLAST of CmaCh06G004830 vs. TAIR10
Match: AT3G20220.1 (AT3G20220.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 70.5 bits (171), Expect = 8.0e-13 Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 1
BLAST of CmaCh06G004830 vs. TAIR10
Match: AT5G66260.1 (AT5G66260.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 70.1 bits (170), Expect = 1.0e-12 Identity = 30/77 (38.96%), Postives = 47/77 (61.04%), Query Frame = 1
BLAST of CmaCh06G004830 vs. NCBI nr
Match: gi|700204012|gb|KGN59145.1| (hypothetical protein Csa_3G777530 [Cucumis sativus]) HSP 1 Score: 175.6 bits (444), Expect = 5.0e-41 Identity = 87/120 (72.50%), Postives = 97/120 (80.83%), Query Frame = 1
BLAST of CmaCh06G004830 vs. NCBI nr
Match: gi|1009160991|ref|XP_015898653.1| (PREDICTED: auxin-induced protein 15A [Ziziphus jujuba]) HSP 1 Score: 128.6 bits (322), Expect = 7.0e-27 Identity = 66/126 (52.38%), Postives = 83/126 (65.87%), Query Frame = 1
BLAST of CmaCh06G004830 vs. NCBI nr
Match: gi|225440847|ref|XP_002282286.1| (PREDICTED: auxin-induced protein 15A [Vitis vinifera]) HSP 1 Score: 125.9 bits (315), Expect = 4.5e-26 Identity = 68/126 (53.97%), Postives = 82/126 (65.08%), Query Frame = 1
BLAST of CmaCh06G004830 vs. NCBI nr
Match: gi|629082501|gb|KCW48946.1| (hypothetical protein EUGRSUZ_K02555 [Eucalyptus grandis]) HSP 1 Score: 125.6 bits (314), Expect = 5.9e-26 Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 1
BLAST of CmaCh06G004830 vs. NCBI nr
Match: gi|702496573|ref|XP_010037266.1| (PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Eucalyptus grandis]) HSP 1 Score: 125.6 bits (314), Expect = 5.9e-26 Identity = 66/131 (50.38%), Postives = 86/131 (65.65%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |