Carg05359 (gene) Silver-seed gourd

Overview
NameCarg05359
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionAuxin-responsive protein
LocationCucurbita_argyrosperma_scaffold_010 : 1392256 .. 1392660 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAGGCAAGAAAATGGTCTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGAACAGAGGGCGAATCATCATCGCACAACGAGTGTTTGCTCAGAGATCGATTGGAATCATCGAAGGATCACGATTCTCACTCGCCGTCGCCGACTTCGACTCCGACCGGTTCTTTTGCTGTTTATGTCGGCGACGAACGGCAGCGCTTCGTCGTTCCGACGAGTTTCTTGTCGCATCCACTCTTTAGGATGCTGCTCGATAAAGCTTACAGAGAGTTCGGATTCGAACAGAGGAACGCGCTTGTGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATTGTTAGCGCTGTGGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTTTAG

mRNA sequence

ATGCTAGGCAAGAAAATGGTCTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGAACAGAGGGCGAATCATCATCGCACAACGAGTGTTTGCTCAGAGATCGATTGGAATCATCGAAGGATCACGATTCTCACTCGCCGTCGCCGACTTCGACTCCGACCGGTTCTTTTGCTGTTTATGTCGGCGACGAACGGCAGCGCTTCGTCGTTCCGACGAGTTTCTTGTCGCATCCACTCTTTAGGATGCTGCTCGATAAAGCTTACAGAGAGTTCGGATTCGAACAGAGGAACGCGCTTGTGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATTGTTAGCGCTGTGGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTTTAG

Coding sequence (CDS)

ATGCTAGGCAAGAAAATGGTCTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGAACAGAGGGCGAATCATCATCGCACAACGAGTGTTTGCTCAGAGATCGATTGGAATCATCGAAGGATCACGATTCTCACTCGCCGTCGCCGACTTCGACTCCGACCGGTTCTTTTGCTGTTTATGTCGGCGACGAACGGCAGCGCTTCGTCGTTCCGACGAGTTTCTTGTCGCATCCACTCTTTAGGATGCTGCTCGATAAAGCTTACAGAGAGTTCGGATTCGAACAGAGGAACGCGCTTGTGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATTGTTAGCGCTGTGGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTTTAG

Protein sequence

MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Homology
[Close]
BLAST of Carg05359 vs. NCBI nr
Match: XP_023517185.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.2 bits (679), Expect = 6.2e-68
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0 

Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60
           MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLL DRLESSKDHDSHSPSPTSTPTGSFA
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLSDRLESSKDHDSHSPSPTSTPTGSFA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120
           VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC
Sbjct: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120

Query: 121 NGRFDFGEIVEEFL 135
           NGRFDFGEIVEEFL
Sbjct: 121 NGRFDFGEIVEEFL 134

[Close]
BLAST of Carg05359 vs. NCBI nr
Match: XP_022972619.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 258.1 bits (658), Expect = 1.7e-65
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0 

Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60
           MLGKKMVSFKKLAKKVKVRVGTEGE SSHNE LLRDRLESSKDHDSHSPSPTSTPTGSFA
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGE-SSHNEYLLRDRLESSKDHDSHSPSPTSTPTGSFA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120
           VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC
Sbjct: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120

Query: 121 NGRFDFGEIVEEFL 135
           NGRFDFGEIVEEFL
Sbjct: 121 NGRFDFGEIVEEFL 133

[Close]
BLAST of Carg05359 vs. NCBI nr
Match: XP_022925979.1 (auxin-induced protein 15A [Cucurbita moschata] >XP_023544813.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo] >XP_023544814.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.9 bits (603), Expect = 4.0e-59
Identity = 121/134 (90.30%), Postives = 128/134 (95.52%), Query Frame = 0 

Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60
           MLGKKMVSFKKLAKKVKVRVGTEGE +S+NECLLRD+LE  +DHDS SPS  STPTGSFA
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGE-ASYNECLLRDQLEPPEDHDSQSPS--STPTGSFA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120
           +YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNAL+VPCSVSAFQEIVSAVECC
Sbjct: 61  IYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECC 120

Query: 121 NGRFDFGEIVEEFL 135
           NGRFDFGE+VEEFL
Sbjct: 121 NGRFDFGELVEEFL 131

[Close]
BLAST of Carg05359 vs. NCBI nr
Match: XP_022977936.1 (auxin-induced protein 15A-like [Cucurbita maxima])

HSP 1 Score: 231.9 bits (590), Expect = 1.3e-57
Identity = 119/134 (88.81%), Postives = 127/134 (94.78%), Query Frame = 0 

Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60
           MLGKKMVSFKKLAKKVKVRVGTEGE +S+NECLLRD+LE  +DHDS SPS  +TPTGSFA
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGE-ASYNECLLRDQLEPPEDHDSQSPS--TTPTGSFA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120
           +YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNAL+VPCSVSAFQEIVSAVEC 
Sbjct: 61  IYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECS 120

Query: 121 NGRFDFGEIVEEFL 135
           NGRFDFGE+VEEFL
Sbjct: 121 NGRFDFGELVEEFL 131

[Close]
BLAST of Carg05359 vs. NCBI nr
Match: XP_008462582.1 (PREDICTED: auxin-induced protein X15 [Cucumis melo])

HSP 1 Score: 230.3 bits (586), Expect = 3.8e-57
Identity = 120/136 (88.24%), Postives = 127/136 (93.38%), Query Frame = 0 

Query: 1   MLGKKMVSFKKLAKKVK-VRVGTEGESSSHNECLLRDRLESSKDHDSHSP-SPTSTPTGS 60
           ML KKMVSFKKLAKKVK VRVGT+ E  SHNECLL DRLE ++DHDS+SP SPTSTPTG 
Sbjct: 1   MLAKKMVSFKKLAKKVKAVRVGTDSE-HSHNECLLTDRLELTEDHDSNSPSSPTSTPTGY 60

Query: 61  FAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE 120
           FA+YVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRNALVVPCSVSAF+EIVSAVE
Sbjct: 61  FAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFEQRNALVVPCSVSAFEEIVSAVE 120

Query: 121 CCNGRFDFGEIVEEFL 135
           CCNGRFDFGEIVEEFL
Sbjct: 121 CCNGRFDFGEIVEEFL 135

[Close]
BLAST of Carg05359 vs. TAIR10
Match: AT2G36210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 144.1 bits (362), Expect = 6.4e-35
Identity = 82/141 (58.16%), Postives = 103/141 (73.05%), Query Frame = 0 

Query: 1   MLGKKMVSFKKLAKKVK-----VRVGTEGES-SSHNECLLRDRLESSKDHDSHSPSPTST 60
           MLGK++ SFK LAKK+K      R G EG S S++NE LL +      + D  +   + T
Sbjct: 1   MLGKRIASFKNLAKKMKSINTTTRSGGEGGSESTYNESLLMN------EADEAAMMASKT 60

Query: 61  PTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREF-GFEQRNALVVPCSVSAFQEI 120
           PTG+FAVYVG+ER + VVPTS+L+HPLFRMLLDK++ EF  FEQ+  LVVPCS+S FQ++
Sbjct: 61  PTGTFAVYVGEERVKRVVPTSYLNHPLFRMLLDKSHDEFLCFEQKVMLVVPCSLSVFQDV 120

Query: 121 VSAVECCNGRFDFGEIVEEFL 135
           V+AVE CNG FDFGE VEEFL
Sbjct: 121 VNAVESCNGNFDFGEFVEEFL 135

[Close]
BLAST of Carg05359 vs. TAIR10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 84.3 bits (207), Expect = 6.1e-17
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 0 

Query: 26  SSSHNECLLRDRLESSKDHDSHSPSPT-STPTGSFAVYVGDERQRFVVPTSFLSHPLFRM 85
           S + N+ LL  +   S +    SP P    P G+ AVYVG E +RF++PTS+LSH LF++
Sbjct: 50  SPAINKRLLDVKNGDSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKV 109

Query: 86  LLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE 119
           LL+KA  EFGF+Q  AL +PC V  F+ ++  +E
Sbjct: 110 LLEKAEEEFGFDQSGALTIPCEVETFKYLLKCME 143

[Close]
BLAST of Carg05359 vs. TAIR10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 79.7 bits (195), Expect = 1.5e-15
Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 0 

Query: 39  ESSKDHDSHSPS-PTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQ 98
           +S ++    SP  P   P G  AVYVG E +RF++PT+FLSH LF++LL+KA  E+GF+ 
Sbjct: 63  DSDEETTCQSPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDH 122

Query: 99  RNALVVPCSVSAFQEIVSAVE 119
             AL +PC V  F+ ++  +E
Sbjct: 123 SGALTIPCEVETFKYLLKCIE 143

[Close]
BLAST of Carg05359 vs. TAIR10
Match: AT3G20220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 74.3 bits (181), Expect = 6.3e-14
Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 0 

Query: 23  EGESSSHNECLLRDRLESSKDHDSHSPS--PTSTPTGSFAVYVG-DERQRFVVPTSFLSH 82
           E   +   E  ++DRL S +  D   P+      P G  AVYVG +ERQRFV+PT +L +
Sbjct: 14  ENRRNRRYETNIKDRLVSGELSDGSRPARDQNGVPRGHLAVYVGREERQRFVIPTKYLQY 73

Query: 83  PLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECCN 122
           P FR L+D+   EFG++    + +PC  S F+EI+     C+
Sbjct: 74  PEFRSLMDEVADEFGYDHEGGIHIPCEESVFEEILIRYMSCD 115

[Close]
BLAST of Carg05359 vs. TAIR10
Match: AT5G66260.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 74.3 bits (181), Expect = 6.3e-14
Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 0 

Query: 55  PTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIV 114
           P G F VYVG  R R V+P SFL+HP+F+MLL ++  EFGF Q N L +PC    F+ ++
Sbjct: 35  PKGHFVVYVGHSRSRHVIPISFLTHPIFQMLLQQSEEEFGFFQDNGLTIPCDEHFFRALI 94

Query: 115 SAV 118
           S++
Sbjct: 95  SSI 97

[Close]
BLAST of Carg05359 vs. Swiss-Prot
Match: sp|O65695|SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-12
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0 

Query: 51  PTSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAF 110
           P   P G F VYVG+ R R++VP SFL+HP F+ LL +A  EFGF+    L +PC    F
Sbjct: 40  PLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVF 99

Query: 111 QEIVSAV 118
           Q + S +
Sbjct: 100 QTLTSMI 106

[Close]
BLAST of Carg05359 vs. Swiss-Prot
Match: sp|Q9LTV3|SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.2e-11
Identity = 29/66 (43.94%), Postives = 45/66 (68.18%), Query Frame = 0 

Query: 52  TSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQ 111
           +S P G   VYVGDE +RFVV    L+HP+F  LL+++ +E+G+EQ+  L +PC V  F+
Sbjct: 48  SSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFE 107

Query: 112 EIVSAV 118
            I+ ++
Sbjct: 108 RIMESL 113

[Close]
BLAST of Carg05359 vs. Swiss-Prot
Match: sp|Q9ZUZ3|SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09
Identity = 30/84 (35.71%), Postives = 49/84 (58.33%), Query Frame = 0 

Query: 38  LESSKDHDSHSPSPTSTPTGSFAVYV---GDERQRFVVPTSFLSHPLFRMLLDKAYREFG 97
           L+S + H   S      P G  A+ V   G+E+QRF+VP  + +HPLF  LL +A  E+G
Sbjct: 8   LKSFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYG 67

Query: 98  FEQRNALVVPCSVSAFQEIVSAVE 119
           F+Q+  + +PC V  F+ + + ++
Sbjct: 68  FDQKGTITIPCHVEEFRYVQALID 91

[Close]
BLAST of Carg05359 vs. Swiss-Prot
Match: sp|O64538|SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09
Identity = 25/66 (37.88%), Postives = 47/66 (71.21%), Query Frame = 0 

Query: 52  TSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQ 111
           +S P+G   V VG++++RFVV    L+HP+F  LL+++ +E+G+ Q+  L +PC+V  F+
Sbjct: 46  SSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFE 105

Query: 112 EIVSAV 118
           ++V ++
Sbjct: 106 QVVESL 111

[Close]
BLAST of Carg05359 vs. Swiss-Prot
Match: sp|Q9SA49|SAU41_ARATH (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09
Identity = 29/84 (34.52%), Postives = 47/84 (55.95%), Query Frame = 0 

Query: 44  HDSHSPSP----------TSTPTGSFAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREF 103
           H  H+P P           + P G   VYVG+E +RFVV    ++HP+F  LL+++ +E+
Sbjct: 34  HRLHAPPPPWSICPARRVNTVPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEY 93

Query: 104 GFEQRNALVVPCSVSAFQEIVSAV 118
           G+ Q+  L +PC V  F+ +V  +
Sbjct: 94  GYAQKGVLHIPCHVIVFERVVETL 117

[Close]
BLAST of Carg05359 vs. TrEMBL
Match: tr|A0A1S3CHA6|A0A1S3CHA6_CUCME (auxin-induced protein X15 OS=Cucumis melo OX=3656 GN=LOC103500907 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.5e-57
Identity = 120/136 (88.24%), Postives = 127/136 (93.38%), Query Frame = 0 

Query: 1   MLGKKMVSFKKLAKKVK-VRVGTEGESSSHNECLLRDRLESSKDHDSHSP-SPTSTPTGS 60
           ML KKMVSFKKLAKKVK VRVGT+ E  SHNECLL DRLE ++DHDS+SP SPTSTPTG 
Sbjct: 1   MLAKKMVSFKKLAKKVKAVRVGTDSE-HSHNECLLTDRLELTEDHDSNSPSSPTSTPTGY 60

Query: 61  FAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE 120
           FA+YVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRNALVVPCSVSAF+EIVSAVE
Sbjct: 61  FAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFEQRNALVVPCSVSAFEEIVSAVE 120

Query: 121 CCNGRFDFGEIVEEFL 135
           CCNGRFDFGEIVEEFL
Sbjct: 121 CCNGRFDFGEIVEEFL 135

[Close]
BLAST of Carg05359 vs. TrEMBL
Match: tr|A0A0A0KEY4|A0A0A0KEY4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452710 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.3e-57
Identity = 121/136 (88.97%), Postives = 125/136 (91.91%), Query Frame = 0 

Query: 1   MLGKKMVSFKKLAKKVK-VRVGTEGESSSHNECLLRDRLESSKDHDSHSP-SPTSTPTGS 60
           ML KKMVSFKKLAKKVK VRVGTE E  SHNECLL DR E   DHDS+SP SPTSTPTGS
Sbjct: 1   MLAKKMVSFKKLAKKVKAVRVGTETE-HSHNECLLTDRFELPADHDSNSPSSPTSTPTGS 60

Query: 61  FAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE 120
           FA+YVG+ERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE
Sbjct: 61  FAIYVGEERQRFVVPTSFLSHPLFRMVLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE 120

Query: 121 CCNGRFDFGEIVEEFL 135
           CCNGRFDFGEIVEEFL
Sbjct: 121 CCNGRFDFGEIVEEFL 135

[Close]
BLAST of Carg05359 vs. TrEMBL
Match: tr|D7TJ88|D7TJ88_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g03120 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-43
Identity = 96/134 (71.64%), Postives = 109/134 (81.34%), Query Frame = 0 

Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60
           MLGKKM S KKL KKVKV +G      SH+ECLLR       D++  SPS T TPTGSFA
Sbjct: 1   MLGKKMGSVKKLVKKVKV-IGGGDREPSHHECLLR-------DYEEGSPSGT-TPTGSFA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120
           VYVG+ERQRFVVPTSFLSHPLF+MLL+KAY EFGF+QRN LVVPCSVS FQE+V+AVECC
Sbjct: 61  VYVGEERQRFVVPTSFLSHPLFKMLLEKAYNEFGFDQRNGLVVPCSVSTFQEVVNAVECC 120

Query: 121 NGRFDFGEIVEEFL 135
           NG+FDFG +VEEF+
Sbjct: 121 NGKFDFGNLVEEFV 125

[Close]
BLAST of Carg05359 vs. TrEMBL
Match: tr|A0A2P6RC34|A0A2P6RC34_ROSCH (Putative small auxin-up RNA OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0474301 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.3e-42
Identity = 95/134 (70.90%), Postives = 106/134 (79.10%), Query Frame = 0 

Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60
           MLGKKMVSFK LAKKVK  VG  G   SH ECLLRD           SP PT  PTG  A
Sbjct: 1   MLGKKMVSFKNLAKKVKA-VGATGREPSHYECLLRD------SEQGGSP-PTKPPTGFLA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120
           VYVG+ERQRFVVPTSFLSHPLF+MLL+KAY EFGF+QRN LVVPCSVSAF+E+VSA+EC 
Sbjct: 61  VYVGEERQRFVVPTSFLSHPLFKMLLEKAYNEFGFQQRNGLVVPCSVSAFEEVVSAMECS 120

Query: 121 NGRFDFGEIVEEFL 135
           +G+FDFGE+VEEF+
Sbjct: 121 HGQFDFGELVEEFI 126

[Close]
BLAST of Carg05359 vs. TrEMBL
Match: tr|A0A2C9VE67|A0A2C9VE67_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G026900 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 5.0e-42
Identity = 95/135 (70.37%), Postives = 110/135 (81.48%), Query Frame = 0 

Query: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSS-HNECLLRDRLESSKDHDSHSPSPTSTPTGSF 60
           MLGKKMVSFKKLAKKVKV +G  G+S S   E LLRD        D+ S + ++TPTG F
Sbjct: 1   MLGKKMVSFKKLAKKVKV-IGKLGDSESPQQEYLLRD------FEDASSGNLSTTPTGFF 60

Query: 61  AVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVEC 120
           AVYVG+ER+RFVVPT FLSHPLF+MLL+K+Y EFGFEQRN LVVPCSVS FQE+V+AVEC
Sbjct: 61  AVYVGEERERFVVPTRFLSHPLFKMLLEKSYNEFGFEQRNKLVVPCSVSTFQEVVNAVEC 120

Query: 121 CNGRFDFGEIVEEFL 135
           CNGRFDFG +VEEF+
Sbjct: 121 CNGRFDFGNLVEEFI 128

The following BLAST results are available for this feature:
BLAST of Carg05359 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023517185.16.2e-6899.25auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo][more]
XP_022972619.11.7e-6598.51auxin-responsive protein SAUR50-like [Cucurbita maxima][more]
XP_022925979.14.0e-5990.30auxin-induced protein 15A [Cucurbita moschata] >XP_023544813.1 auxin-induced pro... [more]
XP_022977936.11.3e-5788.81auxin-induced protein 15A-like [Cucurbita maxima][more]
XP_008462582.13.8e-5788.24PREDICTED: auxin-induced protein X15 [Cucumis melo][more]
BLAST of Carg05359 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G36210.16.4e-3558.16SAUR-like auxin-responsive protein family [more]
AT5G20810.26.1e-1744.68SAUR-like auxin-responsive protein family [more]
AT3G43120.11.5e-1544.44SAUR-like auxin-responsive protein family [more]
AT3G20220.16.3e-1438.24SAUR-like auxin-responsive protein family [more]
AT5G66260.16.3e-1449.21SAUR-like auxin-responsive protein family [more]
BLAST of Carg05359 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O65695|SAU50_ARATH3.3e-1246.27Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S... [more]
sp|Q9LTV3|SAU72_ARATH6.2e-1143.94Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 S... [more]
sp|Q9ZUZ3|SAU32_ARATH1.2e-0935.71Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S... [more]
sp|O64538|SAU40_ARATH1.5e-0937.88Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S... [more]
sp|Q9SA49|SAU41_ARATH1.5e-0934.52Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S... [more]
BLAST of Carg05359 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CHA6|A0A1S3CHA6_CUCME2.5e-5788.24auxin-induced protein X15 OS=Cucumis melo OX=3656 GN=LOC103500907 PE=4 SV=1[more]
tr|A0A0A0KEY4|A0A0A0KEY4_CUCSA4.3e-5788.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452710 PE=4 SV=1[more]
tr|D7TJ88|D7TJ88_VITVI1.2e-4371.64Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g03120 PE=4 SV=... [more]
tr|A0A2P6RC34|A0A2P6RC34_ROSCH1.3e-4270.90Putative small auxin-up RNA OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0474301 ... [more]
tr|A0A2C9VE67|A0A2C9VE67_MANES5.0e-4270.37Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G026900 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009733response to auxin
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05359-RACarg05359-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 34..116
e-value: 4.4E-26
score: 90.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..58
NoneNo IPR availablePANTHERPTHR31374:SF28SUBFAMILY NOT NAMEDcoord: 1..134
NoneNo IPR availablePANTHERPTHR31374FAMILY NOT NAMEDcoord: 1..134

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg05359Cla017679Watermelon (97103) v1carwmB0800
Carg05359Cla018405Watermelon (97103) v1carwmB0807
Carg05359Csa6G452710Cucumber (Chinese Long) v2carcuB0826
Carg05359Csa3G777530Cucumber (Chinese Long) v2carcuB0822
Carg05359MELO3C024553Melon (DHL92) v3.5.1carmeB0805
Carg05359MELO3C009483Melon (DHL92) v3.5.1carmeB0803
Carg05359ClCG04G010130Watermelon (Charleston Gray)carwcgB0789
Carg05359ClCG10G018840Watermelon (Charleston Gray)carwcgB0776
Carg05359CSPI03G35030Wild cucumber (PI 183967)carcpiB0842
Carg05359CSPI06G25560Wild cucumber (PI 183967)carcpiB0847
Carg05359Cucsa.083450Cucumber (Gy14) v1carcgyB0916
Carg05359Cucsa.241260Cucumber (Gy14) v1carcgyB0923
Carg05359CmaCh07G008470Cucurbita maxima (Rimu)carcmaB1130
Carg05359CmaCh06G004830Cucurbita maxima (Rimu)carcmaB1129
Carg05359CmaCh03G011490Cucurbita maxima (Rimu)carcmaB1125
Carg05359CmoCh06G004860Cucurbita moschata (Rifu)carcmoB1099
Carg05359CmoCh07G008790Cucurbita moschata (Rifu)carcmoB1100
Carg05359Lsi03G018800Bottle gourd (USVL1VR-Ls)carlsiB744
Carg05359Lsi01G012140Bottle gourd (USVL1VR-Ls)carlsiB742
Carg05359Cp4.1LG10g04060Cucurbita pepo (Zucchini)carcpeB1128
Carg05359Cp4.1LG08g10010Cucurbita pepo (Zucchini)carcpeB1141
Carg05359Cp4.1LG19g05030Cucurbita pepo (Zucchini)carcpeB1135
Carg05359CsGy3G032490Cucumber (Gy14) v2carcgybB0796
Carg05359CsGy6G025010Cucumber (Gy14) v2carcgybB0799
Carg05359MELO3C024553.2Melon (DHL92) v3.6.1carmedB0816
Carg05359MELO3C009483.2Melon (DHL92) v3.6.1carmedB0815
Carg05359CsaV3_6G040760Cucumber (Chinese Long) v3carcucB0850
Carg05359Cla97C10G201870Watermelon (97103) v2carwmbB0840
Carg05359Cla97C04G076960Watermelon (97103) v2carwmbB0849
Carg05359Bhi11G001932Wax gourdcarwgoB0939
Carg05359Bhi03G001413Wax gourdcarwgoB0945
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg05359Carg10488Silver-seed gourdcarcarB280
The following block(s) are covering this gene:
GeneOrganismBlock
Carg05359Silver-seed gourdcarcarB292
Carg05359Cucurbita maxima (Rimu)carcmaB1117
Carg05359Cucurbita moschata (Rifu)carcmoB1088
Carg05359Cucurbita moschata (Rifu)carcmoB1095
Carg05359Cucurbita pepo (Zucchini)carcpeB1138
Carg05359Cucumber (Chinese Long) v3carcucB0846
Carg05359Watermelon (Charleston Gray)carwcgB0787
Carg05359Watermelon (97103) v1carwmB0814