CmaCh05G003980 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh05G003980
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Plant protein of unknown function (DUF247)
Location	Cma_Chr05 : 1736707 .. 1737359 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAATTCAGCCTACACCCCTCAAGTTATTTCCATCGGTCCATTTCATCATCGTAGTCGAAATAATTTAATAGTCACAGAACAATATAAGCTTCAAGGTCTTAGTAACTTTCTACATCGTCTAGATAACAAAATGAGTTCATTGGAGTTTCTAGTTAAAACTACTCAAGCCTTGATAAAAGAAGCCCGAAATTGCTATGCAGAACCTATAAACATGAGTAATCGAAGATTTTGTTAAGATGATGCTCGTAGATGGTTGTTTCATAGTGGAGTTCTTAATTCTATATTATAAACAATATGACCCGACCGCATTCTTTAAAATTCAAAACAATGTAGATCTTTCCTTCTACAAAAGAATTTCCCATATATATTGATTTGATTAAGCTTGAAAATCAAATCCGTTTCTTTCTTCTTCAACATTTGCTCAACCTCATACCACAAAACTATGCTCCCTTCTCGTTTATAGGACTGATATATGTGTTTTCACAACGTGGATTGATATATAATTATTCTCTTCCTAATGCCTTATCGATAAAACCAAAACACTTTGTTGATTTCTTAAACTTCTACTTTGTCGTGCCCACTATGTCTTTTGAACACACCATTAATAACGAGAAGATTATTAATCATCCATTGATAACTGAGCTTTGA

mRNA sequence

ATGGATAATTCAGCCTACACCCCTCAAGTTATTTCCATCGGTCCATTTCATCATCGTAGTCGAAATAATTTAATAGTCACAGAACAATATAAGCTTCAAGGTCTTAGTAACTTTCTACATCGTCTAGATAACAAAATGAGTTCATTGGAGTTTCTAGTTAAAACTACTCAAGCCTTGATAAAAGAAGCCCGAAATTGCTATGCAGAACCTATAAACATGAAATTTCCCATATATATTGATTTGATTAAGCTTGAAAATCAAATCCGTTTCTTTCTTCTTCAACATTTGCTCAACCTCATACCACAAAACTATGCTCCCTTCTCGTTTATAGGACTGATATATGTGTTTTCACAACGTGGATTGATATATAATTATTCTCTTCCTAATGCCTTATCGATAAAACCAAAACACTTTGTTGATTTCTTAAACTTCTACTTTGTCGTGCCCACTATGTCTTTTGAACACACCATTAATAACGAGAAGATTATTAATCATCCATTGATAACTGAGCTTTGA

Coding sequence (CDS)

ATGGATAATTCAGCCTACACCCCTCAAGTTATTTCCATCGGTCCATTTCATCATCGTAGTCGAAATAATTTAATAGTCACAGAACAATATAAGCTTCAAGGTCTTAGTAACTTTCTACATCGTCTAGATAACAAAATGAGTTCATTGGAGTTTCTAGTTAAAACTACTCAAGCCTTGATAAAAGAAGCCCGAAATTGCTATGCAGAACCTATAAACATGAAATTTCCCATATATATTGATTTGATTAAGCTTGAAAATCAAATCCGTTTCTTTCTTCTTCAACATTTGCTCAACCTCATACCACAAAACTATGCTCCCTTCTCGTTTATAGGACTGATATATGTGTTTTCACAACGTGGATTGATATATAATTATTCTCTTCCTAATGCCTTATCGATAAAACCAAAACACTTTGTTGATTTCTTAAACTTCTACTTTGTCGTGCCCACTATGTCTTTTGAACACACCATTAATAACGAGAAGATTATTAATCATCCATTGATAACTGAGCTTTGA

Protein sequence

MDNSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRLDNKMSSLEFLVKTTQALIKEARNCYAEPINMKFPIYIDLIKLENQIRFFLLQHLLNLIPQNYAPFSFIGLIYVFSQRGLIYNYSLPNALSIKPKHFVDFLNFYFVVPTMSFEHTINNEKIINHPLITEL

Homology

[Close]

BLAST of CmaCh05G003980 vs. TrEMBL
Match: A0A0A0LM96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.6e-34
Identity = 98/199 (49.25%), Postives = 119/199 (59.80%), Query Frame = 1


Query: 1   MDNSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRLDNKMS--------SLEFL 60
           M+  AY PQ+ISIGPF++ +  NLI  EQYKLQG +NFLHR+ NKMS        SL  L
Sbjct: 74  MNPKAYAPQLISIGPFYYHAHKNLIANEQYKLQGFNNFLHRV-NKMSLEQQERTRSLNDL 133

Query: 61  VKTTQALIKEARNCYAEPINMKFPIYI--------------DLIKLENQIRFFLLQHLLN 120
           VK  Q+ +KEARNCYAE INM    +I              DLIKLENQ+ FF+LQHL +
Sbjct: 134 VKKAQSWVKEARNCYAESINMNDEDFIKMMLVDERIPDIDDDLIKLENQLPFFVLQHLFD 193

Query: 121 LIPQ-NYAPFSFIGLIYVFSQRGLIYNYSLPNALSIKPKHFVDFLNFYFVVPTMSFEH-- 172
           LIP+ N  P  F  L Y +   G + NY   + LSIKPKHF+DFL+FYF VP    EH  
Sbjct: 194 LIPKHNDNPNCFKQLTYKYLNMGWLENYEPSDILSIKPKHFIDFLSFYF-VPHHRCEHDQ 253

[Close]

BLAST of CmaCh05G003980 vs. TrEMBL
Match: A0A0A0LQ49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380070 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.0e-22
Identity = 77/176 (43.75%), Postives = 96/176 (54.55%), Query Frame = 1


Query: 3   NSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRL-DNKMSSLEFLVKTTQ-ALI 62
           +S Y PQVISIGPFHH S++ L VTE+YK QGL NFL RL D+K  SLE L K  Q + +
Sbjct: 16  DSLYVPQVISIGPFHHGSKD-LNVTERYKFQGLRNFLRRLNDHKEKSLEELTKIAQLSWV 75

Query: 63  KEARNCYAEPINMKF--------------PIYIDLIKLENQIRFFLLQHLLNLIPQ---- 122
           +EA  CY  PI+M                 +Y DLIKLENQ+ FFLLQ L  LIP+    
Sbjct: 76  EEACGCYIYPIDMDDHEFVKMMCVDGIIPDVYFDLIKLENQLPFFLLQRLFELIPKENNL 135

Query: 123 -------NYAPFSFIGLIYVFSQRGLIYNY-SLPNAL---SIKPKHFVDFLNFYFV 148
                   ++  SF+ L + F   G   NY  L   +      PKH VDFL  Y++
Sbjct: 136 KSLIPNNEFSTISFLELTFQFLHLGCAENYVQLGERIVWSKFDPKHLVDFLKLYYI 190

[Close]

BLAST of CmaCh05G003980 vs. TrEMBL
Match: A0A0A0LKU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G100540 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-16
Identity = 66/197 (33.50%), Postives = 98/197 (49.75%), Query Frame = 1


Query: 1   MDNSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRLDN-------------KMS 60
           M+  AY PQ+ SIGPFH  ++ +LI  EQYKLQ   NFL+ + N             K  
Sbjct: 27  MNTKAYLPQIFSIGPFHSNTQKDLIANEQYKLQAFVNFLYHMINGNDHNIVSLKDILKAG 86

Query: 61  SLEFLVKTTQALIKEARNCYAEPINMK-----FPIYIDLIKLENQI--------RFFLLQ 120
           +L+F+V+ + + +++ R+ YA  INMK       + +D+     Q          FFLLQ
Sbjct: 87  TLKFVVQKSHSWMEQVRDSYASSINMKEEEFFIMMLVDIACFIIQFFRHPSLTGPFFLLQ 146

Query: 121 HLLNLIP-----------QNYAPFSFIGLIYVFSQRGLIYNYSLPNALSIKPKHFVDFLN 161
            LLN +P           Q+ A +S I   Y FS        S+  +  I+PKH VD+LN
Sbjct: 147 RLLNFLPTADPVYLLMCEQDIANYSTIFYGYTFS--------SMDGSRHIEPKHLVDYLN 206

[Close]

BLAST of CmaCh05G003980 vs. TrEMBL
Match: A0A0A0K4A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068570 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14
Identity = 49/96 (51.04%), Postives = 66/96 (68.75%), Query Frame = 1


Query: 1   MDNSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRLDN-KMSSLEFLVKTTQAL 60
           M  + Y PQVISIGPFHH S++ L  TE YKLQGL NFL RLDN K  SLE LVK  ++ 
Sbjct: 57  MKKTTYVPQVISIGPFHHGSKD-LNATEPYKLQGLRNFLRRLDNHKEKSLEELVKIARSW 116

Query: 61  IKEARNCYAEPINMKFPIYIDLIKLEN--QIRFFLL 94
           I+EAR+CY +PI+M    ++ ++ ++    + FF+L
Sbjct: 117 IEEARSCYVDPIDMDDYEFVKMMLVDGCFIVEFFIL 151

[Close]

BLAST of CmaCh05G003980 vs. TrEMBL
Match: A0A0A0LLX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.6e-13
Identity = 74/235 (31.49%), Postives = 103/235 (43.83%), Query Frame = 1


Query: 1   MDNSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRLDN--------KMSSLEFL 60
           M+  AY PQ ISIGPF++ +  NL   EQYK Q + NFL R+          +  SLE L
Sbjct: 66  MNPKAYVPQHISIGPFYYHADENLRANEQYKFQSVINFLRRVYKIESLEQLLQTRSLEDL 125

Query: 61  VKTTQALIKEARNCYAEPINMKFPIYIDLIKLEN--QIRFFLLQHLLNLIP--------Q 120
           VK  Q+ +KEARNCYAE I+M    +I ++ ++    + FF+L +    +P        +
Sbjct: 126 VKKAQSWVKEARNCYAESIDMNDEDFIKMMLMDGCFIVEFFILDYEEYKMPDESFFPKIE 185

Query: 121 NYAPFSFI---------GLIYVFSQRGLIYNYSLPNAL---------------------- 172
           N    SF           LI + +Q        L + +                      
Sbjct: 186 NNVSMSFYKERIPDIDDDLIKLENQLPFFILQHLYDLIPKQDDNPKCFKELTCKYLKMGW 245

[Close]

BLAST of CmaCh05G003980 vs. TAIR10
Match: AT4G31980.1 (AT4G31980.1 unknown protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 46/193 (23.83%), Postives = 84/193 (43.52%), Query Frame = 1


Query: 1   MDNSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRLDNKMSSLEFLVKTTQALI 60
           ++  AYTP+++S GP H R +  L   E  K + L +F+ R +   SSLE LV+  +   
Sbjct: 305 LNPDAYTPRLVSFGPLH-RGKEELQAMEDQKYRYLLSFIPRTN---SSLEDLVRLARTWE 364

Query: 61  KEARNCYAEPINMKFPIYIDLIKLENQIRFFLLQHLLN---------------------- 120
           + AR+CYAE + +    +++++ ++     FL++ LL                       
Sbjct: 365 QNARSCYAEDVKLHSDEFVEMLVVDGS---FLVELLLRSHYPRLRGENDRIFGNSMMITD 424

Query: 121 -----LIPQNYAPFSFIGLIYVFSQRGLIYNYSLPNALSIKPKHFVDFLNFYFVVPTMSF 167
                ++ +N  PF  +  I++       Y    P+ + +  +HF  FL+          
Sbjct: 425 VCRDMILIENQLPFFVVKEIFLLLLN--YYQQGTPSIIQLAQRHFSYFLS---------- 476

[Close]

BLAST of CmaCh05G003980 vs. TAIR10
Match: AT3G50160.1 (AT3G50160.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 51.2 bits (121), Expect = 7.3e-07
Identity = 32/121 (26.45%), Postives = 63/121 (52.07%), Query Frame = 1


Query: 2   DNSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRLDNKMSSLEFLVKTTQALIK 61
           D  +Y PQ++SIGP+HH    +L+  E++K + ++  + R  +    +E  +   + L +
Sbjct: 117 DTKSYMPQIVSIGPYHH-GHKHLMPMERHKWRAVNMVMARAKH---DIEMYIDAMKELEE 176

Query: 62  EARNCYAEPINMKFPIYIDLIKLENQIRFFLLQHLLNLIPQNYAPFSFIGLIYVFSQRGL 121
           +AR CY  PINM    +I+++ L+     F+++ +     + +    +     VF  RGL
Sbjct: 177 KARACYQGPINMNRNEFIEMLVLDG---VFIIE-IFKGTSEGFQEIGYAPNDPVFGMRGL 229

Query: 122 I 123
           +
Sbjct: 237 M 229

[Close]

BLAST of CmaCh05G003980 vs. TAIR10
Match: AT3G50170.1 (AT3G50170.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 49.3 bits (116), Expect = 2.8e-06
Identity = 33/123 (26.83%), Postives = 63/123 (51.22%), Query Frame = 1


Query: 2   DNSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRLDNKMSSLEFLVKTTQALIK 61
           D  +Y PQ +S+GP+HH  +  L   E++K + L+  L RL  +   +E      + L +
Sbjct: 126 DKKSYFPQTVSLGPYHH-GKKRLRPMERHKWRALNKVLKRLKQR---IEMYTNAMRELEE 185

Query: 62  EARNCYAEPINMKFPIYIDLIKLENQIRFFLLQHLLNLIPQNYAPFSFIGLIYVFSQRGL 121
           +AR CY  PI++    + +++ L+     F+L+ L     + +    +     VF+ RGL
Sbjct: 186 KARACYEGPISLSRNEFTEMLVLDG---CFVLE-LFRGTVEGFTEIGYARNDPVFAMRGL 240

Query: 122 IYN 125
           +++
Sbjct: 246 MHS 240

[Close]

BLAST of CmaCh05G003980 vs. TAIR10
Match: AT3G44710.1 (AT3G44710.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 48.5 bits (114), Expect = 4.7e-06
Identity = 25/82 (30.49%), Postives = 46/82 (56.10%), Query Frame = 1


Query: 4   SAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRLDNKMSSLEFLVKTTQALIKEA 63
           +AY P+V+S+GP+HH  + NL + E++KL+ L  F+     K      L+K    L ++ 
Sbjct: 63  AAYEPRVVSLGPYHH-GKKNLQMIEEHKLRFLKIFMDEAKRKGVDTNGLIKAVSVLEEDI 122

Query: 64  RNCYAEPINMKFPIYIDLIKLE 86
           R+ Y+E +       I+++ L+
Sbjct: 123 RDSYSESLYSDGKKLIEMMVLD 143

[Close]

BLAST of CmaCh05G003980 vs. TAIR10
Match: AT3G50150.1 (AT3G50150.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 47.8 bits (112), Expect = 8.0e-06
Identity = 35/124 (28.23%), Postives = 67/124 (54.03%), Query Frame = 1


Query: 2   DNSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRLDNKMSSLEFLVKTTQALIK 61
           D  +Y PQ +SIGP+HH  + +L   E++K + ++  + R  +   ++E  +   + L +
Sbjct: 103 DKKSYLPQTVSIGPYHH-GKVHLRPMERHKWRAVNMIMARTKH---NIEMYIDAMKELEE 162

Query: 62  EARNCYAEPINMK-FPIYIDLIKLENQIRFFLLQHLLNLIPQNYAPFSFIGLIYVFSQRG 121
           EAR CY  PI+MK    + +++ L+     F+L+     I Q +    +     VF++RG
Sbjct: 163 EARACYQGPIDMKNSNEFTEMLVLDG---CFVLELFKGTI-QGFQKIGYARNDPVFAKRG 218

Query: 122 LIYN 125
           L+++
Sbjct: 223 LMHS 218

[Close]

BLAST of CmaCh05G003980 vs. NCBI nr
Match: gi|700207809|gb|KGN62928.1| (hypothetical protein Csa_2G380080 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 2.3e-34
Identity = 98/199 (49.25%), Postives = 119/199 (59.80%), Query Frame = 1


Query: 1   MDNSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRLDNKMS--------SLEFL 60
           M+  AY PQ+ISIGPF++ +  NLI  EQYKLQG +NFLHR+ NKMS        SL  L
Sbjct: 74  MNPKAYAPQLISIGPFYYHAHKNLIANEQYKLQGFNNFLHRV-NKMSLEQQERTRSLNDL 133

Query: 61  VKTTQALIKEARNCYAEPINMKFPIYI--------------DLIKLENQIRFFLLQHLLN 120
           VK  Q+ +KEARNCYAE INM    +I              DLIKLENQ+ FF+LQHL +
Sbjct: 134 VKKAQSWVKEARNCYAESINMNDEDFIKMMLVDERIPDIDDDLIKLENQLPFFVLQHLFD 193

Query: 121 LIPQ-NYAPFSFIGLIYVFSQRGLIYNYSLPNALSIKPKHFVDFLNFYFVVPTMSFEH-- 172
           LIP+ N  P  F  L Y +   G + NY   + LSIKPKHF+DFL+FYF VP    EH  
Sbjct: 194 LIPKHNDNPNCFKQLTYKYLNMGWLENYEPSDILSIKPKHFIDFLSFYF-VPHHRCEHDQ 253

[Close]

BLAST of CmaCh05G003980 vs. NCBI nr
Match: gi|659088834|ref|XP_008445186.1| (PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo])

HSP 1 Score: 114.4 bits (285), Expect = 2.0e-22
Identity = 85/229 (37.12%), Postives = 113/229 (49.34%), Query Frame = 1


Query: 1   MDNSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRLDNKMS--SLEFLVKTTQA 60
           M+  AY PQVISIGPFHH S++ L  TE+YKLQGL NFL RLD+  +  SLE LVK  Q+
Sbjct: 58  MNRIAYVPQVISIGPFHHGSKD-LNATERYKLQGLRNFLRRLDDHKAEKSLEELVKIAQS 117

Query: 61  LIKEARNCYAEPI---------------------------------NMKFP--------- 120
            ++EAR CYA+PI                                 + KFP         
Sbjct: 118 WVEEARRCYADPIDMDDHEFVKMMLVDGCFIVEFFILVHNQYTTSADHKFPQIDPNVDLL 177

Query: 121 --------IYIDLIKLENQIRFFLLQHLLNLIPQ-----------NYAPFSFIGLIYVFS 163
                   +Y DLIKLENQ+ FFLLQ L  LIP+            ++  SF+ L + F 
Sbjct: 178 FYQGIIPDVYFDLIKLENQLPFFLLQRLFELIPKENNPKSLIPDNEFSTISFLELTFEFL 237

[Close]

BLAST of CmaCh05G003980 vs. NCBI nr
Match: gi|700207808|gb|KGN62927.1| (hypothetical protein Csa_2G380070 [Cucumis sativus])

HSP 1 Score: 112.8 bits (281), Expect = 5.8e-22
Identity = 77/176 (43.75%), Postives = 96/176 (54.55%), Query Frame = 1


Query: 3   NSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRL-DNKMSSLEFLVKTTQ-ALI 62
           +S Y PQVISIGPFHH S++ L VTE+YK QGL NFL RL D+K  SLE L K  Q + +
Sbjct: 16  DSLYVPQVISIGPFHHGSKD-LNVTERYKFQGLRNFLRRLNDHKEKSLEELTKIAQLSWV 75

Query: 63  KEARNCYAEPINMKF--------------PIYIDLIKLENQIRFFLLQHLLNLIPQ---- 122
           +EA  CY  PI+M                 +Y DLIKLENQ+ FFLLQ L  LIP+    
Sbjct: 76  EEACGCYIYPIDMDDHEFVKMMCVDGIIPDVYFDLIKLENQLPFFLLQRLFELIPKENNL 135

Query: 123 -------NYAPFSFIGLIYVFSQRGLIYNY-SLPNAL---SIKPKHFVDFLNFYFV 148
                   ++  SF+ L + F   G   NY  L   +      PKH VDFL  Y++
Sbjct: 136 KSLIPNNEFSTISFLELTFQFLHLGCAENYVQLGERIVWSKFDPKHLVDFLKLYYI 190

[Close]

BLAST of CmaCh05G003980 vs. NCBI nr
Match: gi|659088842|ref|XP_008445190.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-17
Identity = 65/181 (35.91%), Postives = 96/181 (53.04%), Query Frame = 1


Query: 1   MDNSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRL---DNKMSSLE------- 60
           +++ AY PQ ISIGPFH+R+R +LI  E YKLQG  NFL R+   + ++ SLE       
Sbjct: 65  INDKAYVPQFISIGPFHYRTRKDLIANEHYKLQGFYNFLRRININEKQVESLEEDQVKIS 124

Query: 61  --FLVKTTQALIKEARNCYAEPINMKFPIYIDLIKLEN--QIRFFLLQHLLNLIPQNYAP 120
              LV+ + + +KEA NCYAEPI M+   +I ++ ++    + FFLL +          P
Sbjct: 125 SKVLVEKSHSWMKEAWNCYAEPIKMEEEEFIIMMLVDACFIVEFFLLCYGSFQEDYEAGP 184

Query: 121 FSFIGLIYV-FSQRGLIYNYSLPNALSIKPKHFVDFLNFYFVV-----PTMSFEHTINNE 162
            S I L Y+     G +  Y + N     P+H +D L+FYF+      P M+ +H     
Sbjct: 185 ISLIDLTYMALKAFGFVREYEINNLYHKNPEHILDLLSFYFLPVPHNDPDMNKQHDKRKN 244

[Close]

BLAST of CmaCh05G003980 vs. NCBI nr
Match: gi|659088838|ref|XP_008445188.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 97.1 bits (240), Expect = 3.3e-17
Identity = 86/236 (36.44%), Postives = 114/236 (48.31%), Query Frame = 1


Query: 1   MDNSAYTPQVISIGPFHHRSRNNLIVTEQYKLQGLSNFLHRLDNKMSSLEFLVKT----- 60
           M+  AY PQ+ISIGPFH+ +  NLI  EQYKLQG  N+L R+  KM SLE LV+T     
Sbjct: 72  MNPKAYAPQLISIGPFHYHTHKNLIANEQYKLQGFINYLRRV-YKMESLEQLVRTKSVED 131

Query: 61  ----TQALIKEARNCYAEPINMKFPIYIDLIKLEN--QIRFFLL------QHLLNLIPQ- 120
                Q+ ++EARNCYAE INM    +I ++ ++    + FF+L      +   +L PQ 
Sbjct: 132 LVKRAQSWVEEARNCYAETINMNDEDFIKMMLVDGCFIVEFFILDFEEYNESHESLFPQI 191

Query: 121 -NYAPFSFI---------GLIYVFSQRGLIYNYSL----------PNA------------ 172
            N    SF           LI + +Q        L          PN             
Sbjct: 192 ENNVSMSFYKERIPDIDEDLIKLENQLPFFVLQHLFDLIPKHKDAPNCFKQLTYEYLTMG 251

The following BLAST results are available for this feature:

BLAST of CmaCh05G003980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh05G003980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM96_CUCSA	1.6e-34	49.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1	[more]
A0A0A0LQ49_CUCSA	4.0e-22	43.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380070 PE=4 SV=1	[more]
A0A0A0LKU4_CUCSA	1.9e-16	33.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G100540 PE=4 SV=1	[more]
A0A0A0K4A0_CUCSA	1.4e-14	51.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068570 PE=4 SV=1	[more]
A0A0A0LLX1_CUCSA	7.6e-13	31.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1	[more]

BLAST of CmaCh05G003980 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31980.1	1.1e-07	23.83	unknown protein	[more]
AT3G50160.1	7.3e-07	26.45	Plant protein of unknown function (DUF247)	[more]
AT3G50170.1	2.8e-06	26.83	Plant protein of unknown function (DUF247)	[more]
AT3G44710.1	4.7e-06	30.49	Plant protein of unknown function (DUF247)	[more]
AT3G50150.1	8.0e-06	28.23	Plant protein of unknown function (DUF247)	[more]

BLAST of CmaCh05G003980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207809\|gb\|KGN62928.1\|	2.3e-34	49.25	hypothetical protein Csa_2G380080 [Cucumis sativus]	[more]
gi\|659088834\|ref\|XP_008445186.1\|	2.0e-22	37.12	PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo]	[more]
gi\|700207808\|gb\|KGN62927.1\|	5.8e-22	43.75	hypothetical protein Csa_2G380070 [Cucumis sativus]	[more]
gi\|659088842\|ref\|XP_008445190.1\|	1.1e-17	35.91	PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]	[more]
gi\|659088838\|ref\|XP_008445188.1\|	3.3e-17	36.44	PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004158	DUF247_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G003980.1	CmaCh05G003980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004158	Protein of unknown function DUF247, plant	PFAM	PF03140	DUF247	coord: 2..73 score: 3.3E-13coord: 77..148 score: 5.
None	No IPR available	PANTHER	PTHR31549	FAMILY NOT NAMED	coord: 1..147 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh05G003980	Lsi08G011830	Bottle gourd (USVL1VR-Ls)	cmalsiB739

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh05G003980	Cucurbita pepo (Zucchini)	cmacpeB766
CmaCh05G003980	Cucurbita pepo (Zucchini)	cmacpeB778
CmaCh05G003980	Cucurbita pepo (Zucchini)	cmacpeB797
CmaCh05G003980	Bottle gourd (USVL1VR-Ls)	cmalsiB727
CmaCh05G003980	Cucumber (Gy14) v2	cgybcmaB258
CmaCh05G003980	Cucumber (Gy14) v2	cgybcmaB422
CmaCh05G003980	Melon (DHL92) v3.6.1	cmamedB818
CmaCh05G003980	Melon (DHL92) v3.6.1	cmamedB828
CmaCh05G003980	Silver-seed gourd	carcmaB0189
CmaCh05G003980	Silver-seed gourd	carcmaB1357
CmaCh05G003980	Cucumber (Chinese Long) v3	cmacucB0935
CmaCh05G003980	Cucumber (Chinese Long) v3	cmacucB0940
CmaCh05G003980	Watermelon (97103) v2	cmawmbB818
CmaCh05G003980	Watermelon (97103) v2	cmawmbB829
CmaCh05G003980	Watermelon (97103) v2	cmawmbB832
CmaCh05G003980	Wax gourd	cmawgoB0939
CmaCh05G003980	Wax gourd	cmawgoB0964
CmaCh05G003980	Cucurbita maxima (Rimu)	cmacmaB199
CmaCh05G003980	Cucurbita maxima (Rimu)	cmacmaB434
CmaCh05G003980	Cucumber (Gy14) v1	cgycmaB0462
CmaCh05G003980	Cucumber (Gy14) v1	cgycmaB0874
CmaCh05G003980	Cucurbita moschata (Rifu)	cmacmoB770
CmaCh05G003980	Cucurbita moschata (Rifu)	cmacmoB783
CmaCh05G003980	Cucurbita moschata (Rifu)	cmacmoB786
CmaCh05G003980	Wild cucumber (PI 183967)	cmacpiB801
CmaCh05G003980	Wild cucumber (PI 183967)	cmacpiB806
CmaCh05G003980	Cucumber (Chinese Long) v2	cmacuB792
CmaCh05G003980	Cucumber (Chinese Long) v2	cmacuB797
CmaCh05G003980	Melon (DHL92) v3.5.1	cmameB725
CmaCh05G003980	Melon (DHL92) v3.5.1	cmameB733
CmaCh05G003980	Watermelon (Charleston Gray)	cmawcgB700
CmaCh05G003980	Watermelon (Charleston Gray)	cmawcgB712
CmaCh05G003980	Watermelon (97103) v1	cmawmB753
CmaCh05G003980	Watermelon (97103) v1	cmawmB756