CmaCh05G003950 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh05G003950
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Plant protein of unknown function (DUF247)
Location	Cma_Chr05 : 1730567 .. 1731703 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAACAATTACCTCTGGTTAATGAAGAATGTAGCATCTTTCGAGTTCATAAACTATTACGCAAGATGAATAATATAGCCTATATCCCTCAAGTCATTTCCATAGATCCATTTCATCATCATAGTCAAAAGGATTTGATAGCTACCGAACAATATAAGCTTCGATATTGTATTAATTTTCTAAATCGTTTGGATAACAAGATAGACTCATTAGAATTCCTTGTGAAAACTACTCAAAGTTGGATGAAAGAAGCTCGAAATTGCTATGAAGAACCCATAAACATGAGCGATGAAGATTTCATTCAAATGATGTTGGTGGATAGTTGTTGTGTAGTGGAGTTTTTGATATTGTATTATGTCGAACAACACCGAAATTCCTCACCTCAAACTCGAGACTATTTCAATCTTTACTTCTACCAAAGGGAACATGAGATATGTCTTGATTCGATTAAGCTAGAAAATCAAGTCCCTTTCTTTGTTCTTGAATGTTTGTTCCACCTTATACCACAAAGTGATGACCGCTTCGTCCATATCAACAAAACCTTACATAAGCACTGCAATAGACGATGGAACAAAGCAAAAGCTTCACTCAAACCCAACTATTTCAATACATCATGGGCTATATTCGGTACTATATCTGCATTTCATAGCTAGCCAAATCTATCTATATAATATAGATATGTTTCTTTTAAATTTACTATGTTGCTCCTTACTGTGTTATATGCTATCTTTATATTTTCTAATGTTTTCTAATAAACATTATGTTATATTTAAAACTGTGAGACTAACAGTAATACAGGCAAAAACAGACAATATATACTCACGATCAAGCATACATTCTTAACTTTAACCTCTATAAAGACATTTTTTTCATAACATGGAAAAGAAACATAATGCTTTATTAAAAAGTGCTTTTACAAATGCTTGTATATTCAAATTCAAAGAAATAAAGGGAAGGAGAGAAAACTTCAAAAACTTTAACCCATTTATAAACGAGTTCTTAACTTTACATTCTTCTTTCGAATAGCTGACCATTACAATTATCACAAAAATATTATCGACCCAAATTTGATTAAGTACAATTTTAAATTGTCATATTTTCATGTAATTCTTAGCCTACAAGTATCATTTTAA

mRNA sequence

ATGATGGAACAATTACCTCTGGTTAATGAAGAATGTAGCATCTTTCGAGTTCATAAACTATTACGCAAGATGAATAATATAGCCTATATCCCTCAAGTCATTTCCATAGATCCATTTCATCATCATAGTCAAAAGGATTTGATAGCTACCGAACAATATAAGCTTCGATATTGTATTAATTTTCTAAATCGTTTGGATAACAAGATAGACTCATTAGAATTCCTTGTGAAAACTACTCAAAGTTGGATGAAAGAAGCTCGAAATTGCTATGAAGAACCCATAAACATGAGCGATGAAGATTTCATTCAAATGATGTTGGTGGATAGTTGTTGTGTAGTGGAGTTTTTGATATTGTATTATGTCGAACAACACCGAAATTCCTCACCTCAAACTCGAGACTATTTCAATCTTTACTTCTACCAAAGGGAACATGAGATATGTCTTGATTCGATTAAGCTAGAAAATCAAGTCCCTTTCTTTGTTCTTGAATGTTTGTTCCACCTTATACCACAAAGTGATGACCGCTTCGTCCATATCAACAAAACCTTACATAAGCACTGCAATAGACGATGGAACAAAGCAAAAGCTTCACTCAAACCCAACTATTTCAATACATCATGGGCTATATTCGCTGACCATTACAATTATCACAAAAATATTATCGACCCAAATTTGATTAAGTACAATTTTAAATTGTCATATTTTCATGTAATTCTTAGCCTACAAGTATCATTTTAA

Coding sequence (CDS)

ATGATGGAACAATTACCTCTGGTTAATGAAGAATGTAGCATCTTTCGAGTTCATAAACTATTACGCAAGATGAATAATATAGCCTATATCCCTCAAGTCATTTCCATAGATCCATTTCATCATCATAGTCAAAAGGATTTGATAGCTACCGAACAATATAAGCTTCGATATTGTATTAATTTTCTAAATCGTTTGGATAACAAGATAGACTCATTAGAATTCCTTGTGAAAACTACTCAAAGTTGGATGAAAGAAGCTCGAAATTGCTATGAAGAACCCATAAACATGAGCGATGAAGATTTCATTCAAATGATGTTGGTGGATAGTTGTTGTGTAGTGGAGTTTTTGATATTGTATTATGTCGAACAACACCGAAATTCCTCACCTCAAACTCGAGACTATTTCAATCTTTACTTCTACCAAAGGGAACATGAGATATGTCTTGATTCGATTAAGCTAGAAAATCAAGTCCCTTTCTTTGTTCTTGAATGTTTGTTCCACCTTATACCACAAAGTGATGACCGCTTCGTCCATATCAACAAAACCTTACATAAGCACTGCAATAGACGATGGAACAAAGCAAAAGCTTCACTCAAACCCAACTATTTCAATACATCATGGGCTATATTCGCTGACCATTACAATTATCACAAAAATATTATCGACCCAAATTTGATTAAGTACAATTTTAAATTGTCATATTTTCATGTAATTCTTAGCCTACAAGTATCATTTTAA

Protein sequence

MMEQLPLVNEECSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCINFLNRLDNKIDSLEFLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCVVEFLILYYVEQHRNSSPQTRDYFNLYFYQREHEICLDSIKLENQVPFFVLECLFHLIPQSDDRFVHINKTLHKHCNRRWNKAKASLKPNYFNTSWAIFADHYNYHKNIIDPNLIKYNFKLSYFHVILSLQVSF

Homology

[Close]

BLAST of CmaCh05G003950 vs. Swiss-Prot
Match: Y3720_ARATH (UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.5e-11
Identity = 50/157 (31.85%), Postives = 77/157 (49.04%), Query Frame = 1


Query: 10  EECSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCINFLNRLDNKI 69
           E C IFRV +    +N  AY P+V+SI P+ H+ +K L   +Q+K R    FL+    K 
Sbjct: 44  ESCCIFRVPESFVALNPKAYKPKVVSIGPY-HYGEKHLQMIQQHKPRLLQLFLDEAKKKD 103

Query: 70  DSLEFLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCVVEFLILYYVEQHRNSSP 129
                LVK       + R  Y E +  +  D + MM++D C    F+++ ++    N   
Sbjct: 104 VEENVLVKAVVDLEDKIRKSYSEELK-TGHDLMFMMVLDGC----FILMVFLIMSGNIEL 163

Query: 130 QTRDYFNLYFYQREHEICLDSIKLENQVPFFVLECLF 167
                F++ +      I  D + LENQVPFFVL+ L+
Sbjct: 164 SEDPIFSIPWLL--SSIQSDLLLLENQVPFFVLQTLY 192

[Close]

BLAST of CmaCh05G003950 vs. TrEMBL
Match: A0A0A0K4A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068570 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.0e-39
Identity = 94/178 (52.81%), Postives = 124/178 (69.66%), Query Frame = 1


Query: 2   MEQLPLVNEECSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCINF 61
           +EQLP+VN+EC I+RV KLL +M    Y+PQVISI PFHH S KDL ATE YKL+   NF
Sbjct: 35  LEQLPVVNKECKIYRVPKLLCQMKKTTYVPQVISIGPFHHGS-KDLNATEPYKLQGLRNF 94

Query: 62  LNRLDN-KIDSLEFLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCVVEFLILYY 121
           L RLDN K  SLE LVK  +SW++EAR+CY +PI+M D +F++MMLVD C +VEF IL Y
Sbjct: 95  LRRLDNHKEKSLEELVKIARSWIEEARSCYVDPIDMDDYEFVKMMLVDGCFIVEFFILVY 154

Query: 122 VE---QHRNSSPQTRDYFNLYFYQR-EHEICLDSIKLENQVPFFVLECLFHLIPQSDD 175
            +    + +  PQ      L FYQ    ++  D +KLENQ+PFF+L+ LF L+P+ ++
Sbjct: 155 SQYTTSNDHKFPQIDPNAGLLFYQGIIPDMYFDLLKLENQLPFFILQRLFELMPKENN 211

[Close]

BLAST of CmaCh05G003950 vs. TrEMBL
Match: A0A0A0LQ57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.8e-37
Identity = 89/184 (48.37%), Postives = 125/184 (67.93%), Query Frame = 1


Query: 1   MMEQLPLVNEECS-IFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCI 60
           M+E LP VN +C+ I++V K LR++N+ AY+PQ ISI PFH+ ++KDLIA E YKL+   
Sbjct: 28  MLEGLPRVNPKCNTIYQVPKELREINDKAYVPQFISIGPFHYRTRKDLIANEHYKLQGFF 87

Query: 61  NFLNRL-----------DNKID-SLEFLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLV 120
           NFL R+           +N+++ S + LV+ +  W+KEA NCY EPI M DE+FI MMLV
Sbjct: 88  NFLGRISIINSHIQLLEENQVNISSKVLVEKSHDWVKEAWNCYAEPIKMKDEEFIIMMLV 147

Query: 121 DSCCVVEFLILYYVEQHRNSSPQTRDYFNLYFYQREHEICLDSIKLENQVPFFVLECLFH 172
           D+C +VEF +LYY   H +      +  +L++Y   +EI LD IKLENQVPFF+L+ LF 
Sbjct: 148 DACFIVEFFLLYYGSFHEDGKLFNAE-LSLFYYGVFYEILLDLIKLENQVPFFLLQNLFD 207

[Close]

BLAST of CmaCh05G003950 vs. TrEMBL
Match: A0A0A0LLX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-36
Identity = 93/199 (46.73%), Postives = 126/199 (63.32%), Query Frame = 1


Query: 6   PLVNEECSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCINFLNRL 65
           P +  +CSI+RV K  R+MN  AY+PQ ISI PF++H+ ++L A EQYK +  INFL R+
Sbjct: 48  PALKNQCSIYRVPKQQREMNPKAYVPQHISIGPFYYHADENLRANEQYKFQSVINFLRRV 107

Query: 66  DNKIDSLEFL---------VKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCVVEFL 125
             KI+SLE L         VK  QSW+KEARNCY E I+M+DEDFI+MML+D C +VEF 
Sbjct: 108 -YKIESLEQLLQTRSLEDLVKKAQSWVKEARNCYAESIDMNDEDFIKMMLMDGCFIVEFF 167

Query: 126 ILYYVE---QHRNSSPQTRDYFNLYFY-QREHEICLDSIKLENQVPFFVLECLFHLIPQS 185
           IL Y E      +  P+  +  ++ FY +R  +I  D IKLENQ+PFF+L+ L+ LIP+ 
Sbjct: 168 ILDYEEYKMPDESFFPKIENNVSMSFYKERIPDIDDDLIKLENQLPFFILQHLYDLIPKQ 227

Query: 186 DDRFVHINKTLHKHCNRRW 192
           DD      +   K+    W
Sbjct: 228 DDNPKCFKELTCKYLKMGW 245

[Close]

BLAST of CmaCh05G003950 vs. TrEMBL
Match: A0A0A0LQ64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381630 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.2e-33
Identity = 84/180 (46.67%), Postives = 116/180 (64.44%), Query Frame = 1


Query: 2   MEQLPLVNEECSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCINF 61
           ++QL +VN EC+I+RV KLL +MN  AY+PQVISI P HH S KDL ATE YKL+   NF
Sbjct: 20  LKQLHVVNTECNIYRVPKLLCQMNMTAYVPQVISIGPLHHGS-KDLNATECYKLQGLRNF 79

Query: 62  LNRLDNKIDS--LEFLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCVVEFLILY 121
           L R D+      LE LV+ TQ ++  AR+CY +PI+M D +F++MMLVD C +VE  IL 
Sbjct: 80  LRRFDDSYGEKLLENLVEITQFYVGRARSCYADPIDMDDHEFVKMMLVDGCFIVELFILV 139

Query: 122 Y----VEQHRNSSPQTRDYFNLYFYQREHEICLDSIKLENQVPFFVLECLFHLIPQSDDR 176
           +     + H+ S          Y+     ++  D IKLENQ+PFF+L+ LF LIP+ +++
Sbjct: 140 HNITTSDDHKFSKIDQNVDLLFYYQGIIPDVYFDLIKLENQLPFFILQLLFDLIPRDNNQ 198

[Close]

BLAST of CmaCh05G003950 vs. TrEMBL
Match: A0A0A0LM96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.7e-32
Identity = 92/216 (42.59%), Postives = 123/216 (56.94%), Query Frame = 1


Query: 1   MMEQLPLVNE-ECSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCI 60
           M++Q+P   E +CSI+RV K L +MN  AY PQ+ISI PF++H+ K+LIA EQYKL+   
Sbjct: 50  MLDQVPSAQEKQCSIYRVPKQLCEMNPKAYAPQLISIGPFYYHAHKNLIANEQYKLQGFN 109

Query: 61  NFLNRLDN-------KIDSLEFLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCV 120
           NFL+R++        +  SL  LVK  QSW+KEARNCY E INM+DEDFI+MMLVD    
Sbjct: 110 NFLHRVNKMSLEQQERTRSLNDLVKKAQSWVKEARNCYAESINMNDEDFIKMMLVD---- 169

Query: 121 VEFLILYYVEQHRNSSPQTRDYFNLYFYQREHEICLDSIKLENQVPFFVLECLFHLIPQS 180
                                       +R  +I  D IKLENQ+PFFVL+ LF LIP+ 
Sbjct: 170 ----------------------------ERIPDIDDDLIKLENQLPFFVLQHLFDLIPKH 229

Query: 181 DDRFVHINKTLHKHCNRRWNKAK-----ASLKPNYF 204
           +D      +  +K+ N  W +        S+KP +F
Sbjct: 230 NDNPNCFKQLTYKYLNMGWLENYEPSDILSIKPKHF 233

[Close]

BLAST of CmaCh05G003950 vs. TAIR10
Match: AT4G31980.1 (AT4G31980.1 unknown protein)

HSP 1 Score: 98.2 bits (243), Expect = 7.4e-21
Identity = 54/165 (32.73%), Postives = 99/165 (60.00%), Query Frame = 1


Query: 5   LPLVNEECSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCINFLNR 64
           L  ++ +C I++V   LR++N  AY P+++S  P H   +++L A E  K RY ++F+ R
Sbjct: 286 LSSLSTKCCIYKVPNKLRRLNPDAYTPRLVSFGPLHR-GKEELQAMEDQKYRYLLSFIPR 345

Query: 65  LDNKIDSLEFLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCVVEFLILYYVEQH 124
            ++   SLE LV+  ++W + AR+CY E + +  ++F++M++VD   +VE L+  +  + 
Sbjct: 346 TNS---SLEDLVRLARTWEQNARSCYAEDVKLHSDEFVEMLVVDGSFLVELLLRSHYPRL 405

Query: 125 RNSSPQTRDYFNLYFYQREHEICLDSIKLENQVPFFVLECLFHLI 170
           R  +   R + N        ++C D I +ENQ+PFFV++ +F L+
Sbjct: 406 RGEN--DRIFGNSMMIT---DVCRDMILIENQLPFFVVKEIFLLL 441

[Close]

BLAST of CmaCh05G003950 vs. TAIR10
Match: AT2G36430.1 (AT2G36430.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 89.0 bits (219), Expect = 4.5e-18
Identity = 59/158 (37.34%), Postives = 87/158 (55.06%), Query Frame = 1


Query: 12  CSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCINFLNRLDNKIDS 71
           CSIFRV + +   N   Y P+V+SI P+H   Q  L   E++K RY    L R  N   +
Sbjct: 45  CSIFRVPQSMIDCNGRCYEPRVVSIGPYHR-GQTQLKMIEEHKWRYLNVLLTRTQNL--T 104

Query: 72  LEFLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCVVE-FLILYYVEQHRNSSPQ 131
           LE  +K+ ++  + AR CY E I+M  E+F +MM++D C ++E F  +  +     + P 
Sbjct: 105 LEDYMKSVKNVEEVARECYSETIHMDSEEFNEMMVLDGCFLLELFRKVNNLVPFEPNDPL 164

Query: 132 TRDYFNLYFYQREHEICLDSIKLENQVPFFVLECLFHL 169
               + L F+ R      D + LENQ+PFFVLE LF+L
Sbjct: 165 VAMAWVLPFFYR------DFLCLENQIPFFVLETLFNL 193

[Close]

BLAST of CmaCh05G003950 vs. TAIR10
Match: AT3G47210.1 (AT3G47210.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-16
Identity = 56/159 (35.22%), Postives = 81/159 (50.94%), Query Frame = 1


Query: 10  EECSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCINFLNRLDNKI 69
           E C IFRV K   +MN  AY P+V+SI P+ HH +K L   +Q+KLR+   FL      +
Sbjct: 91  ESCCIFRVPKSFAEMNPEAYKPKVVSIGPY-HHGRKHLEMIQQHKLRFLHLFLRTA--SV 150

Query: 70  DSLEFLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCVVEFLILY--YVEQHRNS 129
           D  + L      W  E R  Y E +  S  + + MM++D C ++  L++    +E + + 
Sbjct: 151 DR-DVLFNAVVDWEDEIRKSYSEGLEGSPHELVYMMILDGCFILMLLLIVSRKIELYESE 210

Query: 130 SPQTRDYFNLYFYQREHEICLDSIKLENQVPFFVLECLF 167
            P     + L   Q       D + LENQVPFFVL+ LF
Sbjct: 211 DPILTIPWILPSIQS------DLLLLENQVPFFVLQTLF 239

[Close]

BLAST of CmaCh05G003950 vs. TAIR10
Match: AT3G50170.1 (AT3G50170.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 75.9 bits (185), Expect = 3.9e-14
Identity = 55/157 (35.03%), Postives = 80/157 (50.96%), Query Frame = 1


Query: 14  IFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCINFLNRLDNKIDSLE 73
           I+RV   L++ +  +Y PQ +S+ P+HH  +K L   E++K R     L RL  +I   E
Sbjct: 115 IYRVPHYLQENDKKSYFPQTVSLGPYHH-GKKRLRPMERHKWRALNKVLKRLKQRI---E 174

Query: 74  FLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCVVEFLILYYVEQHRNSSPQTRD 133
                 +   ++AR CYE PI++S  +F +M+++D C V+E L    VE          D
Sbjct: 175 MYTNAMRELEEKARACYEGPISLSRNEFTEMLVLDGCFVLE-LFRGTVEGFTEIGYARND 234

Query: 134 YFNLYFYQR--EHEICLDSIKLENQVPFFVLECLFHL 169
                F  R   H I  D I LENQ+P FVL+ L  L
Sbjct: 235 ---PVFAMRGLMHSIQRDMIMLENQLPLFVLDRLLEL 263

[Close]

BLAST of CmaCh05G003950 vs. TAIR10
Match: AT5G22550.2 (AT5G22550.2 Plant protein of unknown function (DUF247))

HSP 1 Score: 74.7 bits (182), Expect = 8.8e-14
Identity = 49/156 (31.41%), Postives = 82/156 (52.56%), Query Frame = 1


Query: 12  CSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKD-LIATEQYKLRYCINFLNRLDNKID 71
           C I+R+   L+++N+ AY P+++SI P+HH S K  L   E++K RY   F+++      
Sbjct: 44  CCIYRIPHTLKQVNDKAYAPKIVSIGPYHHSSDKQHLKMIEEHKKRYLEMFVSKTKENGV 103

Query: 72  SLEFLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCVVEFLILYYVEQHRNSSPQ 131
            L  LV       ++ R+ Y E +  S +  I++ML+D C +   L+L+ V   +     
Sbjct: 104 YLIHLVDLVSGLEQKIRDSYSENLEFSQQKLIKVMLLDGCFI---LMLFLVVSQKIEYTN 163

Query: 132 TRD-YFNLYFYQREHEICLDSIKLENQVPFFVLECL 166
            +D  F L +      +  D + LENQVP F+L+ L
Sbjct: 164 LKDPIFKLRWIL--PTLRSDLLLLENQVPLFLLKVL 194

[Close]

BLAST of CmaCh05G003950 vs. NCBI nr
Match: gi|659088838|ref|XP_008445188.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 177.9 bits (450), Expect = 2.1e-41
Identity = 106/222 (47.75%), Postives = 144/222 (64.86%), Query Frame = 1


Query: 1   MMEQLPLVNE-ECSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCI 60
           M++Q+P  +E +CSI+RV K LR+MN  AY PQ+ISI PFH+H+ K+LIA EQYKL+  I
Sbjct: 48  MLDQVPPTHENQCSIYRVPKQLREMNPKAYAPQLISIGPFHYHTHKNLIANEQYKLQGFI 107

Query: 61  NFLNRLDNKIDSLEFLVKT---------TQSWMKEARNCYEEPINMSDEDFIQMMLVDSC 120
           N+L R+  K++SLE LV+T          QSW++EARNCY E INM+DEDFI+MMLVD C
Sbjct: 108 NYLRRV-YKMESLEQLVRTKSVEDLVKRAQSWVEEARNCYAETINMNDEDFIKMMLVDGC 167

Query: 121 CVVEFLIL---YYVEQHRNSSPQTRDYFNLYFY-QREHEICLDSIKLENQVPFFVLECLF 180
            +VEF IL    Y E H +  PQ  +  ++ FY +R  +I  D IKLENQ+PFFVL+ LF
Sbjct: 168 FIVEFFILDFEEYNESHESLFPQIENNVSMSFYKERIPDIDEDLIKLENQLPFFVLQHLF 227

Query: 181 HLIPQSDDRFVHINKTLHKHCNRRWNKAK-----ASLKPNYF 204
            LIP+  D      +  +++    W +        S+KP +F
Sbjct: 228 DLIPKHKDAPNCFKQLTYEYLTMGWLENYEPSDILSIKPKHF 268

[Close]

BLAST of CmaCh05G003950 vs. NCBI nr
Match: gi|659088834|ref|XP_008445186.1| (PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 3.6e-41
Identity = 99/179 (55.31%), Postives = 124/179 (69.27%), Query Frame = 1


Query: 2   MEQLPLVNEECSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCINF 61
           +EQLP VN ECSI+RV KLL +MN IAY+PQVISI PFHH S KDL ATE+YKL+   NF
Sbjct: 36  LEQLPAVNTECSIYRVPKLLCQMNRIAYVPQVISIGPFHHGS-KDLNATERYKLQGLRNF 95

Query: 62  LNRLDNKI--DSLEFLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCVVEFLIL- 121
           L RLD+     SLE LVK  QSW++EAR CY +PI+M D +F++MMLVD C +VEF IL 
Sbjct: 96  LRRLDDHKAEKSLEELVKIAQSWVEEARRCYADPIDMDDHEFVKMMLVDGCFIVEFFILV 155

Query: 122 --YYVEQHRNSSPQTRDYFNLYFYQR-EHEICLDSIKLENQVPFFVLECLFHLIPQSDD 175
              Y     +  PQ     +L FYQ    ++  D IKLENQ+PFF+L+ LF LIP+ ++
Sbjct: 156 HNQYTTSADHKFPQIDPNVDLLFYQGIIPDVYFDLIKLENQLPFFLLQRLFELIPKENN 213

[Close]

BLAST of CmaCh05G003950 vs. NCBI nr
Match: gi|700188571|gb|KGN43804.1| (hypothetical protein Csa_7G068570 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 1.5e-39
Identity = 94/178 (52.81%), Postives = 124/178 (69.66%), Query Frame = 1


Query: 2   MEQLPLVNEECSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCINF 61
           +EQLP+VN+EC I+RV KLL +M    Y+PQVISI PFHH S KDL ATE YKL+   NF
Sbjct: 35  LEQLPVVNKECKIYRVPKLLCQMKKTTYVPQVISIGPFHHGS-KDLNATEPYKLQGLRNF 94

Query: 62  LNRLDN-KIDSLEFLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCVVEFLILYY 121
           L RLDN K  SLE LVK  +SW++EAR+CY +PI+M D +F++MMLVD C +VEF IL Y
Sbjct: 95  LRRLDNHKEKSLEELVKIARSWIEEARSCYVDPIDMDDYEFVKMMLVDGCFIVEFFILVY 154

Query: 122 VE---QHRNSSPQTRDYFNLYFYQR-EHEICLDSIKLENQVPFFVLECLFHLIPQSDD 175
            +    + +  PQ      L FYQ    ++  D +KLENQ+PFF+L+ LF L+P+ ++
Sbjct: 155 SQYTTSNDHKFPQIDPNAGLLFYQGIIPDMYFDLLKLENQLPFFILQRLFELMPKENN 211

[Close]

BLAST of CmaCh05G003950 vs. NCBI nr
Match: gi|700207813|gb|KGN62932.1| (hypothetical protein Csa_2G380610 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 4.1e-37
Identity = 89/184 (48.37%), Postives = 125/184 (67.93%), Query Frame = 1


Query: 1   MMEQLPLVNEECS-IFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCI 60
           M+E LP VN +C+ I++V K LR++N+ AY+PQ ISI PFH+ ++KDLIA E YKL+   
Sbjct: 28  MLEGLPRVNPKCNTIYQVPKELREINDKAYVPQFISIGPFHYRTRKDLIANEHYKLQGFF 87

Query: 61  NFLNRL-----------DNKID-SLEFLVKTTQSWMKEARNCYEEPINMSDEDFIQMMLV 120
           NFL R+           +N+++ S + LV+ +  W+KEA NCY EPI M DE+FI MMLV
Sbjct: 88  NFLGRISIINSHIQLLEENQVNISSKVLVEKSHDWVKEAWNCYAEPIKMKDEEFIIMMLV 147

Query: 121 DSCCVVEFLILYYVEQHRNSSPQTRDYFNLYFYQREHEICLDSIKLENQVPFFVLECLFH 172
           D+C +VEF +LYY   H +      +  +L++Y   +EI LD IKLENQVPFF+L+ LF 
Sbjct: 148 DACFIVEFFLLYYGSFHEDGKLFNAE-LSLFYYGVFYEILLDLIKLENQVPFFLLQNLFD 207

[Close]

BLAST of CmaCh05G003950 vs. NCBI nr
Match: gi|778674379|ref|XP_011650197.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 2.0e-36
Identity = 93/199 (46.73%), Postives = 126/199 (63.32%), Query Frame = 1


Query: 6   PLVNEECSIFRVHKLLRKMNNIAYIPQVISIDPFHHHSQKDLIATEQYKLRYCINFLNRL 65
           P +  +CSI+RV K  R+MN  AY+PQ ISI PF++H+ ++L A EQYK +  INFL R+
Sbjct: 48  PALKNQCSIYRVPKQQREMNPKAYVPQHISIGPFYYHADENLRANEQYKFQSVINFLRRV 107

Query: 66  DNKIDSLEFL---------VKTTQSWMKEARNCYEEPINMSDEDFIQMMLVDSCCVVEFL 125
             KI+SLE L         VK  QSW+KEARNCY E I+M+DEDFI+MML+D C +VEF 
Sbjct: 108 -YKIESLEQLLQTRSLEDLVKKAQSWVKEARNCYAESIDMNDEDFIKMMLMDGCFIVEFF 167

Query: 126 ILYYVE---QHRNSSPQTRDYFNLYFY-QREHEICLDSIKLENQVPFFVLECLFHLIPQS 185
           IL Y E      +  P+  +  ++ FY +R  +I  D IKLENQ+PFF+L+ L+ LIP+ 
Sbjct: 168 ILDYEEYKMPDESFFPKIENNVSMSFYKERIPDIDDDLIKLENQLPFFILQHLYDLIPKQ 227

Query: 186 DDRFVHINKTLHKHCNRRW 192
           DD      +   K+    W
Sbjct: 228 DDNPKCFKELTCKYLKMGW 245

The following BLAST results are available for this feature:

BLAST of CmaCh05G003950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3720_ARATH	8.5e-11	31.85	UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=1	[more]

BLAST of CmaCh05G003950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4A0_CUCSA	1.0e-39	52.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068570 PE=4 SV=1	[more]
A0A0A0LQ57_CUCSA	2.8e-37	48.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1	[more]
A0A0A0LLX1_CUCSA	1.4e-36	46.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1	[more]
A0A0A0LQ64_CUCSA	3.2e-33	46.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381630 PE=4 SV=1	[more]
A0A0A0LM96_CUCSA	4.7e-32	42.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1	[more]

BLAST of CmaCh05G003950 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31980.1	7.4e-21	32.73	unknown protein	[more]
AT2G36430.1	4.5e-18	37.34	Plant protein of unknown function (DUF247)	[more]
AT3G47210.1	1.9e-16	35.22	Plant protein of unknown function (DUF247)	[more]
AT3G50170.1	3.9e-14	35.03	Plant protein of unknown function (DUF247)	[more]
AT5G22550.2	8.8e-14	31.41	Plant protein of unknown function (DUF247)	[more]

BLAST of CmaCh05G003950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088838\|ref\|XP_008445188.1\|	2.1e-41	47.75	PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]	[more]
gi\|659088834\|ref\|XP_008445186.1\|	3.6e-41	55.31	PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo]	[more]
gi\|700188571\|gb\|KGN43804.1\|	1.5e-39	52.81	hypothetical protein Csa_7G068570 [Cucumis sativus]	[more]
gi\|700207813\|gb\|KGN62932.1\|	4.1e-37	48.37	hypothetical protein Csa_2G380610 [Cucumis sativus]	[more]
gi\|778674379\|ref\|XP_011650197.1\|	2.0e-36	46.73	PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004158	DUF247_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G003950.1	CmaCh05G003950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004158	Protein of unknown function DUF247, plant	PFAM	PF03140	DUF247	coord: 14..169 score: 2.1
None	No IPR available	PANTHER	PTHR31549	FAMILY NOT NAMED	coord: 1..191 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh05G003950	Csa2G380070	Cucumber (Chinese Long) v2	cmacuB792
CmaCh05G003950	CmoCh05G004070	Cucurbita moschata (Rifu)	cmacmoB786
CmaCh05G003950	Lsi08G011840	Bottle gourd (USVL1VR-Ls)	cmalsiB739

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh05G003950	Cucumber (Gy14) v2	cgybcmaB258
CmaCh05G003950	Cucumber (Gy14) v2	cgybcmaB422
CmaCh05G003950	Melon (DHL92) v3.6.1	cmamedB818
CmaCh05G003950	Melon (DHL92) v3.6.1	cmamedB828
CmaCh05G003950	Silver-seed gourd	carcmaB0189
CmaCh05G003950	Silver-seed gourd	carcmaB1357
CmaCh05G003950	Cucumber (Chinese Long) v3	cmacucB0935
CmaCh05G003950	Cucumber (Chinese Long) v3	cmacucB0940
CmaCh05G003950	Watermelon (97103) v2	cmawmbB818
CmaCh05G003950	Watermelon (97103) v2	cmawmbB829
CmaCh05G003950	Watermelon (97103) v2	cmawmbB832
CmaCh05G003950	Wax gourd	cmawgoB0939
CmaCh05G003950	Wax gourd	cmawgoB0964
CmaCh05G003950	Cucurbita maxima (Rimu)	cmacmaB199
CmaCh05G003950	Cucurbita maxima (Rimu)	cmacmaB434
CmaCh05G003950	Cucumber (Gy14) v1	cgycmaB0462
CmaCh05G003950	Cucumber (Gy14) v1	cgycmaB0874
CmaCh05G003950	Cucurbita moschata (Rifu)	cmacmoB770
CmaCh05G003950	Cucurbita moschata (Rifu)	cmacmoB783
CmaCh05G003950	Wild cucumber (PI 183967)	cmacpiB801
CmaCh05G003950	Wild cucumber (PI 183967)	cmacpiB806
CmaCh05G003950	Cucumber (Chinese Long) v2	cmacuB797
CmaCh05G003950	Melon (DHL92) v3.5.1	cmameB725
CmaCh05G003950	Melon (DHL92) v3.5.1	cmameB733
CmaCh05G003950	Watermelon (Charleston Gray)	cmawcgB700
CmaCh05G003950	Watermelon (Charleston Gray)	cmawcgB712
CmaCh05G003950	Watermelon (97103) v1	cmawmB753
CmaCh05G003950	Watermelon (97103) v1	cmawmB756
CmaCh05G003950	Cucurbita pepo (Zucchini)	cmacpeB766
CmaCh05G003950	Cucurbita pepo (Zucchini)	cmacpeB778
CmaCh05G003950	Cucurbita pepo (Zucchini)	cmacpeB797
CmaCh05G003950	Bottle gourd (USVL1VR-Ls)	cmalsiB727