CmaCh05G002250 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGGGCAGAAACGGGCAATGCCCGGCAATAACGGGCAGCAGGGGAAGAGGGTCCACCCACCGGGACACATTCACTCGCAACTCCACAACGACTGAGCTGGGGGCAATGACGAAGCGCTGTGTGAATCCAATTCGTCATTTGACCACCACGTTCGGTTTAATTAGAACTGTTAACTGTGTGCGGGAGTTTAGGGTAACCATGGTTGGGTTTTGACGGCCATTCTGCCGTTCCAAACCCTATATATGCATCCTCCCGCTCTCTCCCACTCTTGGGACAAACGAGGAGACTTCAGCGACTCATCTTTCCTTCTCTCTGATCGACGATCTTCCAGGTTGGGATTCTCTGATCCGCCCCCATTTTGTGAATATTTGTACTCGTATCTACTATTCTCTCAATCTTTACTTGATTTTTCCGTTCTGTTTGATTCTTCGCTGAAAATCATATTTGGATGGTGATTGTTGAAGGATCGAGTGGTGGGTTTAGGGTTTAGGGTTTATTTCTTGTAGTTGATCGGTGTGTTTGTTTCCTCTCTGTCTTTATGATTGAAATTATGTAATGTAATGTAATGATCGGCTAACTCGTTGTTGATTTTGAACGATACGTGATTTGGGTTTTATGAACCCCAAGCTGTAGCCTGCAATTGTTGGGTGGGAACATTTATATCTGATCTTCTGTGTCGCTTATATTACAGCTCGTTGCAGCTATTTTTTCAATTAACAGAGTGATTTTTGGACCTTTTTTTTTATTCTCTTGTTTCTTTCTTTACGGATGAATCGATATGTACGCGCTGTGTGGCTTGATCATTTGTGCCCCATCATTTGAATTATTTGTTCATGTAAGAGAGATTCCATTTATAGGTGATCAATTCGTAGTCGAGATTGGATTGATTTGATTTGAAGCTTAATTGAGTTTCGTTTTGTGATATCTTTTGGAACAGCTCTAGACAAAATTAGACGAGAGTTCTGTCTTCTCCTTGTTACCATGACTCCTTCAACGGTCACCTCTTCGACTATACTTGATTTATTTTCTACTGACGATGAGACTTTTTTAGCATTATGGAGAATAAGGAGTGGAGGATCTTTTCCTGCAAATGTTCATGATATAAATCCTTACCAGTGTAAACCTGAAAATTTACCAGGTACTTTTTTCACAAGAATTCATGTTGTTAATTTCCCAAGTTTTCCAGAAAATGTTCATGATATGATGATGTTCTTCAAGGCTCAGGCCTCTTGAATTGCTGCGTGTCGAACATTGTATTTTCAGTTTATATCATAAAACAATTTCAATGTTGATTCCTTGCTTCAATTTTCAAAACAGTGTCAAAGTTACGAATTACAAATTTACAGCTGAGACATGCTTGTTTAGTTTCAATGAAGCTTAAGGTACTTTTTATGTCCAGATGGAGTTTGGTATTACGTTGAGGGCAACGTGGATGCTGGCTCAAGTTTTGGTCGCTGGAAGCTGAAAGATGGAGACTGTAAACTGTATACAAACTCTTCCTTCACTGGAGGGAGAACAAGTTATGAATATTATGAAGGTCAAGCACCTTATGAGAGTAAAACAGCCTGGGTTATGCAAAAGTACTGGATGAATCAGATGGACCTGCGTGCAACCATCGAGCAAGAGGTATATCCTGCAAAATCTATTTGCCAAAAGGTTCATTGGCTGACATTGCCCTTTTTTCTTTTCCTACCCAGCCTATTAGTCAATTGCTTGTTTGGTTGGGCAATATGCAGGAGACCAGCTCACTTTGCAAAGTCTTTCTTGGAGATGAACAATTTCAAAACAATGAAATGATTCAGAAAACCGAATTTTCTAGTATTCTCAATTCAGAACCAGTCCTAAATCATCAGTTGGTTGTTACAGATGGTTCGACTTCGAATAACATGGCGAATGGATTGACAAGCAAGTCTAAGGTTGTAATCACTATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCACACACACACCCCACCCCACCCCGATGTCCATGCATTTCTTTCTTAAAGTTGATATGAGACCAGTTTTGTATATCCATTTGGTGTTCTCTTTTTTAACTGTTCTTACTGTCACCGGAAACTGATTGCTCCCATCTTCTCTCCATTTCCTTCTCTGCTCGGTTCAGAGTCGCAAATGGTGTCTTTGTTTTCAGTTAATGACAAATGATGTTTTGTAGATGAATGAAGATGACAAGATGATAGAATTGGCAGATGCAGGAAAACGTTTGGATAATCATTTAGAAGATATCCATCCTGAGATGGATTATTGTTTAGGTGACGACTACTTGGAATTGCTGGATTTAGATAACCCAACATCTTCGTCATCGAGCTCTGAAAATTCTAGTTGCTTGTCCATGTCATCGAATGAAGATTTTGTTACAATGGATGTTCTATGTGATGTAGAACGTGAAATTAACCATGACAGGGGACGAAGAGATGCTGCCTGCATCCGTTCCTCTGCACCCTTCAAACTAAAGAAGGAGGTGGTGCATCAAGTGGCTTCAGGTTTGTCCACTTATTTTTTGCATCCTCCTGTTGTTTAACTTTCATTTTATGCAGAACAGTACATTCTGCTACGTGGTTACTGAATGGAACCATATGGGTTTTGCTATTCTTTCGTATGTTCTCCAAAAAACCGATCATGATAGAGAGAATTATTCTGATTTTATGCCCATGCTGTTAATATTTCTCTTTATATATATCCGTGCCCTTTTGTTTGTCAATTATAGTCTCAGTGAGATCTCACATTGGTTGGAGAGGAAAATGAAACATCCTTTATAATGGTATGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAGCTTTAAGGGGAAGGCTACCAAGGACACAATATCGGTTAGCAGTGGACTTGAGAAGTTACAAATGGTATCAGAGCCATACATCAGGCAGCGTGCTAGTGAGGACGCTGAACCTTCAAGGGGAGTGGATTATAAGATCCCACATCAATTGGATAAAAGAATGAAACATTCCTTATAAGGGTGTAACAATCTTTCCTTACTAGAAGCCTTTTAAAATCCTTGAGGTAATGTTTGCACAAAGAGAATAATATCTGCTAGCCGTAGGTTTCTGTTGTTATAGTCTCTCATATGCATGCTCGAGTAGAGTTATTTAGACGAAAATGTAAAATTGTCATCGTGGTTTCAACCATAGATTCACAGTTACGAAATGCATATTCACTTCAGATCTAAACACACAACGTCTCGTTTTCCCTCTCGAAAATGCAGCAGGAAAATTACATCGCTTACTCATAATAACTATCCTTGTACACAGATTCTCTTGTCACCATCATAAGAAGCCACCCAGCGGCCAAAGAGACTCCCAAAACCGATTCCTCGGCGAACATGAAACTCCCAAGCCAAAGTAAGAAAGAAGGGTACAGAATGAAAGGTGCATCATCAAGTTGTCACAACAAGGTCTCAAATGGTGAAGAAACAGGTGTGGATGGAGGAAAGAAGAGGGTTGGCAGAAGGGGGAAGAGTCCAAAGAAGAAGTACTTTTGCTTCTTTGCTCTTTAGATCTTCCTCCGCATCAGTTAGAGTAAGTAAGTTAGTGATGGGATTAGACAAGATTAACAATGGTTTTGAGCAGACTACTGAAGCCTTTCCTTTCAAGTCTGCAACATCATACCTTAAAAATTATCCTGTTTGATTAAGTTCAGTTCAGTTTGGTTCGGTTCGAACTGGGTTTCTAGAGATGATGTTCTGTAATTGTAATTGTAATTCAAATGAGTTGACTTGACTTCATTCATAGCTTGCTGAAGTCAATGTAATTGTAGAGGGTCCCACTCGTCTTTTGGGGAGTAACCAGCCCACCATTGTAACTAGTTCATGTTTCTTGAGTTGAAGTAAATGTTTTCGTTTATCTTTTCTTGTCG GTGGGCAGAAACGGGCAATGCCCGGCAATAACGGGCAGCAGGGGAAGAGGGTCCACCCACCGGGACACATTCACTCGCAACTCCACAACGACTGAGCTGGGGGCAATGACGAAGCGCTGTGTGAATCCAATTCGTCATTTGACCACCACGTTCGGTTTAATTAGAACTGTTAACTGTGTGCGGGAGTTTAGGGTAACCATGGTTGGGTTTTGACGGCCATTCTGCCGTTCCAAACCCTATATATGCATCCTCCCGCTCTCTCCCACTCTTGGGACAAACGAGGAGACTTCAGCGACTCATCTTTCCTTCTCTCTGATCGACGATCTTCCAGCTCTAGACAAAATTAGACGAGAGTTCTGTCTTCTCCTTGTTACCATGACTCCTTCAACGGTCACCTCTTCGACTATACTTGATTTATTTTCTACTGACGATGAGACTTTTTTAGCATTATGGAGAATAAGGAGTGGAGGATCTTTTCCTGCAAATGTTCATGATATAAATCCTTACCAGTGTAAACCTGAAAATTTACCAGATGGAGTTTGGTATTACGTTGAGGGCAACGTGGATGCTGGCTCAAGTTTTGGTCGCTGGAAGCTGAAAGATGGAGACTGTAAACTGTATACAAACTCTTCCTTCACTGGAGGGAGAACAAGTTATGAATATTATGAAGGTCAAGCACCTTATGAGAGTAAAACAGCCTGGGTTATGCAAAAGTACTGGATGAATCAGATGGACCTGCGTGCAACCATCGAGCAAGAGGTATATCCTGCAAAATCTATTTGCCAAAAGGAGACCAGCTCACTTTGCAAAGTCTTTCTTGGAGATGAACAATTTCAAAACAATGAAATGATTCAGAAAACCGAATTTTCTAGTATTCTCAATTCAGAACCAGTCCTAAATCATCAGTTGGTTGTTACAGATGGTTCGACTTCGAATAACATGGCGAATGGATTGACAAGCAAGTCTAAGATGAATGAAGATGACAAGATGATAGAATTGGCAGATGCAGGAAAACGTTTGGATAATCATTTAGAAGATATCCATCCTGAGATGGATTATTGTTTAGGTGACGACTACTTGGAATTGCTGGATTTAGATAACCCAACATCTTCGTCATCGAGCTCTGAAAATTCTAGTTGCTTGTCCATGTCATCGAATGAAGATTTTGTTACAATGGATGTTCTATGTGATGTAGAACGTGAAATTAACCATGACAGGGGACGAAGAGATGCTGCCTGCATCCGTTCCTCTGCACCCTTCAAACTAAAGAAGGAGGTGGTGCATCAAGTGGCTTCAGATTCTCTTGTCACCATCATAAGAAGCCACCCAGCGGCCAAAGAGACTCCCAAAACCGATTCCTCGGCGAACATGAAACTCCCAAGCCAAAGTAAGAAAGAAGGGTACAGAATGAAAGGTGCATCATCAAGTTGTCACAACAAGGTCTCAAATGGTGAAGAAACAGGTGTGGATGGAGGAAAGAAGAGGGTTGGCAGAAGGGGGAAGAGTCCAAAGAAGAAGTACTTTTGCTTCTTTGCTCTTTAGATCTTCCTCCGCATCAGTTAGAGTAAGTAAGTTAGTGATGGGATTAGACAAGATTAACAATGGTTTTGAGCAGACTACTGAAGCCTTTCCTTTCAAGTCTGCAACATCATACCTTAAAAATTATCCTGTTTGATTAAGTTCAGTTCAGTTTGGTTCGGTTCGAACTGGGTTTCTAGAGATGATGTTCTGTAATTGTAATTGTAATTCAAATGAGTTGACTTGACTTCATTCATAGCTTGCTGAAGTCAATGTAATTGTAGAGGGTCCCACTCGTCTTTTGGGGAGTAACCAGCCCACCATTGTAACTAGTTCATGTTTCTTGAGTTGAAGTAAATGTTTTCGTTTATCTTTTCTTGTCG ATGACTCCTTCAACGGTCACCTCTTCGACTATACTTGATTTATTTTCTACTGACGATGAGACTTTTTTAGCATTATGGAGAATAAGGAGTGGAGGATCTTTTCCTGCAAATGTTCATGATATAAATCCTTACCAGTGTAAACCTGAAAATTTACCAGATGGAGTTTGGTATTACGTTGAGGGCAACGTGGATGCTGGCTCAAGTTTTGGTCGCTGGAAGCTGAAAGATGGAGACTGTAAACTGTATACAAACTCTTCCTTCACTGGAGGGAGAACAAGTTATGAATATTATGAAGGTCAAGCACCTTATGAGAGTAAAACAGCCTGGGTTATGCAAAAGTACTGGATGAATCAGATGGACCTGCGTGCAACCATCGAGCAAGAGGTATATCCTGCAAAATCTATTTGCCAAAAGGAGACCAGCTCACTTTGCAAAGTCTTTCTTGGAGATGAACAATTTCAAAACAATGAAATGATTCAGAAAACCGAATTTTCTAGTATTCTCAATTCAGAACCAGTCCTAAATCATCAGTTGGTTGTTACAGATGGTTCGACTTCGAATAACATGGCGAATGGATTGACAAGCAAGTCTAAGATGAATGAAGATGACAAGATGATAGAATTGGCAGATGCAGGAAAACGTTTGGATAATCATTTAGAAGATATCCATCCTGAGATGGATTATTGTTTAGGTGACGACTACTTGGAATTGCTGGATTTAGATAACCCAACATCTTCGTCATCGAGCTCTGAAAATTCTAGTTGCTTGTCCATGTCATCGAATGAAGATTTTGTTACAATGGATGTTCTATGTGATGTAGAACGTGAAATTAACCATGACAGGGGACGAAGAGATGCTGCCTGCATCCGTTCCTCTGCACCCTTCAAACTAAAGAAGGAGGTGGTGCATCAAGTGGCTTCAGATTCTCTTGTCACCATCATAAGAAGCCACCCAGCGGCCAAAGAGACTCCCAAAACCGATTCCTCGGCGAACATGAAACTCCCAAGCCAAAGTAAGAAAGAAGGGTACAGAATGAAAGGTGCATCATCAAGTTGTCACAACAAGGTCTCAAATGGTGAAGAAACAGGTGTGGATGGAGGAAAGAAGAGGGTTGGCAGAAGGGGGAAGAGTCCAAAGAAGAAGTACTTTTGCTTCTTTGCTCTTTAG MTPSTVTSSTILDLFSTDDETFLALWRIRSGGSFPANVHDINPYQCKPENLPDGVWYYVEGNVDAGSSFGRWKLKDGDCKLYTNSSFTGGRTSYEYYEGQAPYESKTAWVMQKYWMNQMDLRATIEQEVYPAKSICQKETSSLCKVFLGDEQFQNNEMIQKTEFSSILNSEPVLNHQLVVTDGSTSNNMANGLTSKSKMNEDDKMIELADAGKRLDNHLEDIHPEMDYCLGDDYLELLDLDNPTSSSSSSENSSCLSMSSNEDFVTMDVLCDVEREINHDRGRRDAACIRSSAPFKLKKEVVHQVASDSLVTIIRSHPAAKETPKTDSSANMKLPSQSKKEGYRMKGASSSCHNKVSNGEETGVDGGKKRVGRRGKSPKKKYFCFFAL
BLAST of CmaCh05G002250 vs. TrEMBL
Match: A0A0A0LRG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361420 PE=4 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 3.5e-106 Identity = 224/353 (63.46%), Postives = 267/353 (75.64%), Query Frame = 1
BLAST of CmaCh05G002250 vs. TrEMBL
Match: A0A0M4FLN5_MANES (NAC transcription factors 12 OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 9.7e-48 Identity = 143/401 (35.66%), Postives = 211/401 (52.62%), Query Frame = 1
BLAST of CmaCh05G002250 vs. TrEMBL
Match: W9S3M1_9ROSA (NAC domain-containing protein 78 OS=Morus notabilis GN=L484_021211 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.1e-46 Identity = 140/409 (34.23%), Postives = 210/409 (51.34%), Query Frame = 1
BLAST of CmaCh05G002250 vs. TrEMBL
Match: M5XEE4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007090mg PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 5.3e-46 Identity = 143/397 (36.02%), Postives = 210/397 (52.90%), Query Frame = 1
BLAST of CmaCh05G002250 vs. TrEMBL
Match: U5FNU9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s04080g PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45 Identity = 136/396 (34.34%), Postives = 213/396 (53.79%), Query Frame = 1
BLAST of CmaCh05G002250 vs. TAIR10
Match: AT1G65910.1 (AT1G65910.1 NAC domain containing protein 28) HSP 1 Score: 51.2 bits (121), Expect = 1.6e-06 Identity = 42/171 (24.56%), Postives = 79/171 (46.20%), Query Frame = 1
BLAST of CmaCh05G002250 vs. NCBI nr
Match: gi|659087883|ref|XP_008444686.1| (PREDICTED: uncharacterized protein LOC103487948 [Cucumis melo]) HSP 1 Score: 448.7 bits (1153), Expect = 1.0e-122 Identity = 257/403 (63.77%), Postives = 302/403 (74.94%), Query Frame = 1
BLAST of CmaCh05G002250 vs. NCBI nr
Match: gi|778671265|ref|XP_011649606.1| (PREDICTED: uncharacterized protein LOC101220327 [Cucumis sativus]) HSP 1 Score: 447.6 bits (1150), Expect = 2.2e-122 Identity = 255/405 (62.96%), Postives = 303/405 (74.81%), Query Frame = 1
BLAST of CmaCh05G002250 vs. NCBI nr
Match: gi|700207457|gb|KGN62576.1| (hypothetical protein Csa_2G361420 [Cucumis sativus]) HSP 1 Score: 393.3 bits (1009), Expect = 5.0e-106 Identity = 224/353 (63.46%), Postives = 267/353 (75.64%), Query Frame = 1
BLAST of CmaCh05G002250 vs. NCBI nr
Match: gi|925170145|gb|ALC78989.1| (NAC transcription factors 12 [Manihot esculenta]) HSP 1 Score: 199.1 bits (505), Expect = 1.4e-47 Identity = 143/401 (35.66%), Postives = 211/401 (52.62%), Query Frame = 1
BLAST of CmaCh05G002250 vs. NCBI nr
Match: gi|703135983|ref|XP_010106034.1| (NAC domain-containing protein 78 [Morus notabilis]) HSP 1 Score: 194.1 bits (492), Expect = 4.5e-46 Identity = 140/409 (34.23%), Postives = 210/409 (51.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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