CmaCh04G029610 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G029610
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Blue copper protein
Location	Cma_Chr04 : 19461309 .. 19462237 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATACACAATCATAGCATTTTTTTAACTTTTGAAGGGCAGAAAAGAAAGGGATCCTTTAAAATGGTGTGAATAAATGTGTATATAAAGAGGAGAAGGCATCAAAAACAGAGCAGGAGCAGCTAAGAAGATAGAGATGGAGGGATTAGGGAGAGGCTTGTTTGTTGTTATAGCTGCTGCAGCTTCAATGCTGGAAATGGGTTTGGCCGATCAAAGACATGTGGTTGGGGGAACCCAAGGTTGGCAACAATCCATTGATTTCGACTCGTGGGCAGAAGCTCAGACCTTCAAAGTTGGCGACCAACTCGGTACATATACATATCTCTCTTCATCATCTTTTCAATTCCAAACCATATTTCATTGCATATTTCTCTTCATATGTGTAACAAAATTTGGTCAGTTTTCAACTACGCTTCGGGGCTGCACAGCGTGGTAGAGCTTCCGGACGAGAGTGCGTATGAGAACTGCGATATTGGGAGCGCCATCGAGTCGAAGAGCAGCGGGAAGGATGGCATCAAGTTGACGAAGGCGGGAACACGATACTTCGCGTGCGGCACCATGGGGCATTGCAGCCAAGGCATGAAGGTCAAGATCAAAATAGCCACTGGCACAGCTTCCTCTACTCCATCTCATCCTTCTTCTTCTGCCTCTTCTTCTTTTTCTTCACATTATTCTCTTCTGGGTTGCTTCCTCATCATGGCTTTTTACGCCTTGAGATTCATGTGAAATAGTTATTATGATCAAATCCCCTTAACCAGTTCATTCTTTTAAACCAGTTCGTTCTTTTAAACCAGTTTTTGGGTTTTGTTGTGGGGTTGTTTGTAACCCTTGTTCTGTTTTCATTATTTTCCTTTTTTGATTGCTAAGATATTATTTGGCATATTTACGTGGATTATTAAATAAATGAGGACAAGTTTTTTTGGGTCCTGG

mRNA sequence

ATATACACAATCATAGCATTTTTTTAACTTTTGAAGGGCAGAAAAGAAAGGGATCCTTTAAAATGGTGTGAATAAATGTGTATATAAAGAGGAGAAGGCATCAAAAACAGAGCAGGAGCAGCTAAGAAGATAGAGATGGAGGGATTAGGGAGAGGCTTGTTTGTTGTTATAGCTGCTGCAGCTTCAATGCTGGAAATGGGTTTGGCCGATCAAAGACATGTGGTTGGGGGAACCCAAGGTTGGCAACAATCCATTGATTTCGACTCGTGGGCAGAAGCTCAGACCTTCAAAGTTGGCGACCAACTCGTTTTCAACTACGCTTCGGGGCTGCACAGCGTGGTAGAGCTTCCGGACGAGAGTGCGTATGAGAACTGCGATATTGGGAGCGCCATCGAGTCGAAGAGCAGCGGGAAGGATGGCATCAAGTTGACGAAGGCGGGAACACGATACTTCGCGTGCGGCACCATGGGGCATTGCAGCCAAGGCATGAAGGTCAAGATCAAAATAGCCACTGGCACAGCTTCCTCTACTCCATCTCATCCTTCTTCTTCTGCCTCTTCTTCTTTTTCTTCACATTATTCTCTTCTGGGTTGCTTCCTCATCATGGCTTTTTACGCCTTGAGATTCATGTGAAATAGTTATTATGATCAAATCCCCTTAACCAGTTCATTCTTTTAAACCAGTTCGTTCTTTTAAACCAGTTTTTGGGTTTTGTTGTGGGGTTGTTTGTAACCCTTGTTCTGTTTTCATTATTTTCCTTTTTTGATTGCTAAGATATTATTTGGCATATTTACGTGGATTATTAAATAAATGAGGACAAGTTTTTTTGGGTCCTGG

Coding sequence (CDS)

ATGGAGGGATTAGGGAGAGGCTTGTTTGTTGTTATAGCTGCTGCAGCTTCAATGCTGGAAATGGGTTTGGCCGATCAAAGACATGTGGTTGGGGGAACCCAAGGTTGGCAACAATCCATTGATTTCGACTCGTGGGCAGAAGCTCAGACCTTCAAAGTTGGCGACCAACTCGTTTTCAACTACGCTTCGGGGCTGCACAGCGTGGTAGAGCTTCCGGACGAGAGTGCGTATGAGAACTGCGATATTGGGAGCGCCATCGAGTCGAAGAGCAGCGGGAAGGATGGCATCAAGTTGACGAAGGCGGGAACACGATACTTCGCGTGCGGCACCATGGGGCATTGCAGCCAAGGCATGAAGGTCAAGATCAAAATAGCCACTGGCACAGCTTCCTCTACTCCATCTCATCCTTCTTCTTCTGCCTCTTCTTCTTTTTCTTCACATTATTCTCTTCTGGGTTGCTTCCTCATCATGGCTTTTTACGCCTTGAGATTCATGTGA

Protein sequence

MEGLGRGLFVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGLHSVVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKIKIATGTASSTPSHPSSSASSSFSSHYSLLGCFLIMAFYALRFM

Homology

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BLAST of CmaCh04G029610 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.3e-20
Identity = 54/121 (44.63%), Postives = 77/121 (63.64%), Query Frame = 1


Query: 28  HVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGLHSVVELPDESAYENCDIGSAIE 87
           + VG T GW    D+ +WA  +TF VGD LVFNY +G H+V E+  ES Y++C  G++I 
Sbjct: 27  YTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVK-ESDYKSCTSGNSIS 86

Query: 88  SKSSGKDGIKLTKAGTRYFACGTMGHCSQGMK--VKIKIATGTASSTPSHPSSSASSSFS 147
           + S+G   I L KAG  YF CG  GH + GMK  +K+K ++G++++  + PSSS   S S
Sbjct: 87  TDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKASSGSSAAPSATPSSSGKGSPS 146

[Close]

BLAST of CmaCh04G029610 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.4e-17
Identity = 43/106 (40.57%), Postives = 65/106 (61.32%), Query Frame = 1


Query: 28  HVVGGTQGWQQSIDFD--SWAEAQTFKVGDQLVFNYASGLHSVVELPDESAYENCDIGSA 87
           H VG + GW   + +D   WA +  F VGD L+FNY +  H+V+++ D+  +++C+  S 
Sbjct: 4   HKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQV-DQEQFKSCNSSSP 63

Query: 88  IESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKIKIATGTASS 132
             S +SG D I L + GT YF CG  GHC  G KV+IK+  G++S+
Sbjct: 64  AASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSSA 108

[Close]

BLAST of CmaCh04G029610 vs. Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.2e-17
Identity = 47/117 (40.17%), Postives = 66/117 (56.41%), Query Frame = 1


Query: 30  VGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGLHSVVELPDESAYENCDIGSAIESK 89
           VG   GW  ++D+  W   +TF+VGD L F Y  GL   V + D++ Y+NCD   A ++ 
Sbjct: 26  VGDISGWTSNLDYTVWLTGKTFRVGDTLEFVY--GLSHSVSVVDKAGYDNCDSSGATQNF 85

Query: 90  SSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKIKI-ATGTASSTPSHPSSSASSSFS 146
           + G   I LT  GT +F C T GHC  GMK+ + + A   + STPS P S+ S+  S
Sbjct: 86  ADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAAPSPSTPSSPPSTPSTPSS 140

[Close]

BLAST of CmaCh04G029610 vs. Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.5e-16
Identity = 52/143 (36.36%), Postives = 75/143 (52.45%), Query Frame = 1


Query: 1   MEGLGRGLFVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFN 60
           M GL +    V AA A +L + +      V  T  W   +D+  WA  +TF+VGD L F 
Sbjct: 3   MNGLSK--MAVAAATALLLVLTIVPGAVAVTYTIEWTTGVDYSGWATGKTFRVGDILEFK 62

Query: 61  YASGLHSVVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHC--SQGM 120
           Y S     V++ D++ Y+ CD  S+ E+ S G   I L   G  YF C T GHC  + GM
Sbjct: 63  YGSS--HTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGM 122

Query: 121 KVKIKIATGTAS--STPSHPSSS 140
           K+ + +  G+A   +TP+ PSS+
Sbjct: 123 KLAVNVVAGSAGPPATPTPPSST 141

[Close]

BLAST of CmaCh04G029610 vs. Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-12
Identity = 36/95 (37.89%), Postives = 58/95 (61.05%), Query Frame = 1


Query: 28  HVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGLHSVVELPDESAYENCDIGSAIE 87
           +VVGG+ GW  + + +SW + + F+ GD L+FNY   +H+VV + ++  +  C+  +  +
Sbjct: 3   YVVGGSGGW--TFNTESWPKGKRFRAGDILLFNYNPXMHNVV-VVNQGGFSTCNTPAGAK 62

Query: 88  SKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKI 123
             +SG+D IKL K G  YF C   GHC  GMK+ +
Sbjct: 63  VYTSGRDQIKLPK-GQSYFICNFPGHCQSGMKIAV 93

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BLAST of CmaCh04G029610 vs. TrEMBL
Match: A0A0A0LQ69_CUCSA (Blue copper protein OS=Cucumis sativus GN=Csa_2G406720 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.3e-57
Identity = 118/159 (74.21%), Postives = 138/159 (86.79%), Query Frame = 1


Query: 8   LFVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGLHS 67
           L ++I  AA M EM LADQRH+VGG+QGWQ+S+DFDSWA +QTFKVGDQ+VF Y S LHS
Sbjct: 16  LVMMIVGAALMAEMSLADQRHMVGGSQGWQESVDFDSWASSQTFKVGDQIVFKYDSSLHS 75

Query: 68  VVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKIKIATG 127
           VVEL DES+Y+NCDIG++IESKSSG D IKLTK+GTRYFACGT+GHCSQGMKVKIKIATG
Sbjct: 76  VVELSDESSYKNCDIGNSIESKSSGNDAIKLTKSGTRYFACGTIGHCSQGMKVKIKIATG 135

Query: 128 TASSTPSHPSSSASSSFSSHYSLLGCFL-IMAFYALRFM 166
           +ASSTPS PSSS+SSS +S YSL+G  L ++ FYALR M
Sbjct: 136 SASSTPSSPSSSSSSSSNSPYSLMGFILTLLPFYALRSM 174

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BLAST of CmaCh04G029610 vs. TrEMBL
Match: A0A0D2M3S8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G270000 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.8e-40
Identity = 80/148 (54.05%), Postives = 114/148 (77.03%), Query Frame = 1


Query: 1   MEGLGRGLFVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFN 60
           MEG+ + +F V+     ++   ++  +HVVGG+QGW++S+D +SWA AQTFKVGDQLVF 
Sbjct: 4   MEGMCK-IFFVLVIVLPLIAKQVSATQHVVGGSQGWEESVDLNSWASAQTFKVGDQLVFK 63

Query: 61  YASGLHSVVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKV 120
           Y+SGLHSVVEL  E+AY+NCD+G++++SK++GKD +KL K GTRYFACGT+GHC QGMK+
Sbjct: 64  YSSGLHSVVELGSETAYKNCDLGTSLDSKNTGKDVVKLNKVGTRYFACGTLGHCDQGMKM 123

Query: 121 KIKIATGTASSTPSHPSSSASSSFSSHY 149
           K+    G A STP+  S +++++F   Y
Sbjct: 124 KVTTVAGNAPSTPASDSDTSAAAFFPRY 150

[Close]

BLAST of CmaCh04G029610 vs. TrEMBL
Match: A0A0B0M606_GOSAR (Blue copper OS=Gossypium arboreum GN=F383_16202 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39
Identity = 79/144 (54.86%), Postives = 112/144 (77.78%), Query Frame = 1


Query: 1   MEGLGRGLFVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFN 60
           MEG+ + +F V+     ++   ++  +HVVGG+QGW++S+D +SWA AQTFKVGDQLVF 
Sbjct: 4   MEGVCK-IFFVLIIVLPLIAKQVSATQHVVGGSQGWEESVDLNSWASAQTFKVGDQLVFK 63

Query: 61  YASGLHSVVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKV 120
           Y+SGLHSVVEL  E+AY+NCD+G++++SK++G D +KL K GTRYFACGT+GHC QGMK+
Sbjct: 64  YSSGLHSVVELGSETAYKNCDLGTSLDSKNTGNDVVKLNKVGTRYFACGTLGHCDQGMKM 123

Query: 121 KIKIATGTASSTPSHPSSSASSSF 145
           KI    G A STP+  S +++++F
Sbjct: 124 KITTVAGNAPSTPASDSDTSAAAF 146

[Close]

BLAST of CmaCh04G029610 vs. TrEMBL
Match: M5WUJ6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017323mg PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39
Identity = 85/139 (61.15%), Postives = 108/139 (77.70%), Query Frame = 1


Query: 8   LFVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGLHS 67
           + +V+     + + G A Q   VGG+QGW +S DF+SWA AQ FKVGDQLVF Y+SGLHS
Sbjct: 7   ILLVLVFVGLITKKGFAAQL-TVGGSQGWDESTDFNSWASAQKFKVGDQLVFKYSSGLHS 66

Query: 68  VVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKIKIATG 127
           +VELP+ESAY++CD+G A++SK+SG D +KLTKAGTRYFACGT+GHC QGMKVKI    G
Sbjct: 67  LVELPNESAYKSCDLGGALDSKNSGNDVVKLTKAGTRYFACGTLGHCGQGMKVKITTVDG 126

Query: 128 TASSTPSHPSSSASSSFSS 147
            A S+P+  SSS+SSS +S
Sbjct: 127 NAPSSPASASSSSSSSDAS 144

[Close]

BLAST of CmaCh04G029610 vs. TrEMBL
Match: B9RBK2_RICCO (Blue copper protein, putative OS=Ricinus communis GN=RCOM_1677760 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.6e-39
Identity = 86/152 (56.58%), Postives = 112/152 (73.68%), Query Frame = 1


Query: 9   FVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGLHSV 68
           F+++   A  ++ G+A  +HVVGG+QGW +S DF SW  ++ FKVGDQL F Y SGLHSV
Sbjct: 6   FLMLFFVALFVKEGMA-AQHVVGGSQGWDESADFSSWTSSKKFKVGDQLAFKYTSGLHSV 65

Query: 69  VELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKIKIATGT 128
           VEL  ESAY+NCD+GS ++S S+G D +KL+K GTRYFACGT+GHC QGMKVKI   TGT
Sbjct: 66  VELASESAYKNCDLGSPLDSLSTGNDVVKLSKEGTRYFACGTLGHCDQGMKVKITTETGT 125

Query: 129 ASSTPSHPSSSASSSFSSHYSL--LGCFLIMA 159
           A STP   SSS +S+  + YS+   G F+++A
Sbjct: 126 APSTPDSSSSSHASASMASYSIRPFGSFVLVA 156

[Close]

BLAST of CmaCh04G029610 vs. TAIR10
Match: AT3G27200.1 (AT3G27200.1 Cupredoxin superfamily protein)

HSP 1 Score: 151.0 bits (380), Expect = 6.5e-37
Identity = 75/138 (54.35%), Postives = 103/138 (74.64%), Query Frame = 1


Query: 8   LFVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGLHS 67
           L +++ +    ++  LA  RHV+GG+QGW+QS+DFDSW+  Q+FKVGDQ+VF Y S LHS
Sbjct: 7   LVILVFSGLLSVKTALA-ARHVIGGSQGWEQSVDFDSWSSDQSFKVGDQIVFKY-SELHS 66

Query: 68  VVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKIKIATG 127
           VVEL  E+AY++CD+G+++ S SSG D +KL+K GTRYFACGT+GHC QGMK+K+ + + 
Sbjct: 67  VVELGSETAYKSCDLGTSVNSLSSGNDVVKLSKTGTRYFACGTVGHCEQGMKIKVNVVSS 126

Query: 128 TASSTPSHPSSSASSSFS 146
            + S  S PS S S S S
Sbjct: 127 DSKSA-SSPSGSGSGSDS 141

[Close]

BLAST of CmaCh04G029610 vs. TAIR10
Match: AT2G32300.1 (AT2G32300.1 uclacyanin 1)

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18
Identity = 51/147 (34.69%), Postives = 79/147 (53.74%), Query Frame = 1


Query: 6   RGLFVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGL 65
           R + ++I+  A+ L        H +GG  GW       +WA  QTF VGD LVF+Y +  
Sbjct: 4   REMLIIISVLATTLIGLTVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAF 63

Query: 66  HSVVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKIKIA 125
           H VVE+  +  +++C     + + ++G   + LT  G RYF CG  GHCSQGMK+++ + 
Sbjct: 64  HDVVEV-TKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVV 123

Query: 126 -TGTASSTPSHPSSSASSSFSSHYSLL 152
            T T + T   P++  S +  S  S+L
Sbjct: 124 PTATVAPTAPLPNTVPSLNAPSPSSVL 149

[Close]

BLAST of CmaCh04G029610 vs. TAIR10
Match: AT3G60280.1 (AT3G60280.1 uclacyanin 3)

HSP 1 Score: 88.2 bits (217), Expect = 5.2e-18
Identity = 47/117 (40.17%), Postives = 66/117 (56.41%), Query Frame = 1


Query: 30  VGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGLHSVVELPDESAYENCDIGSAIESK 89
           VG   GW  ++D+  W   +TF+VGD L F Y  GL   V + D++ Y+NCD   A ++ 
Sbjct: 26  VGDISGWTSNLDYTVWLTGKTFRVGDTLEFVY--GLSHSVSVVDKAGYDNCDSSGATQNF 85

Query: 90  SSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKIKI-ATGTASSTPSHPSSSASSSFS 146
           + G   I LT  GT +F C T GHC  GMK+ + + A   + STPS P S+ S+  S
Sbjct: 86  ADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAAPSPSTPSSPPSTPSTPSS 140

[Close]

BLAST of CmaCh04G029610 vs. TAIR10
Match: AT2G44790.1 (AT2G44790.1 uclacyanin 2)

HSP 1 Score: 86.3 bits (212), Expect = 2.0e-17
Identity = 52/143 (36.36%), Postives = 75/143 (52.45%), Query Frame = 1


Query: 1   MEGLGRGLFVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFN 60
           M GL +    V AA A +L + +      V  T  W   +D+  WA  +TF+VGD L F 
Sbjct: 3   MNGLSK--MAVAAATALLLVLTIVPGAVAVTYTIEWTTGVDYSGWATGKTFRVGDILEFK 62

Query: 61  YASGLHSVVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHC--SQGM 120
           Y S     V++ D++ Y+ CD  S+ E+ S G   I L   G  YF C T GHC  + GM
Sbjct: 63  YGSS--HTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGM 122

Query: 121 KVKIKIATGTAS--STPSHPSSS 140
           K+ + +  G+A   +TP+ PSS+
Sbjct: 123 KLAVNVVAGSAGPPATPTPPSST 141

[Close]

BLAST of CmaCh04G029610 vs. TAIR10
Match: AT1G22480.1 (AT1G22480.1 Cupredoxin superfamily protein)

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-16
Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 1


Query: 33  TQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGLHSVVELPDESAYENCDIGSAIESKSSG 92
           T  W    D+      +TF VGD +VFNY +G H+V E+  E+ Y++C +G++I S SSG
Sbjct: 24  TVNWSLGTDYTPLTTGKTFSVGDTIVFNYGAG-HTVDEV-SENDYKSCTLGNSITSDSSG 83

Query: 93  KDGIKLTKAGTRYFACGTMGHCSQGMKVKIKIAT--------GTASSTP 134
              I LT  G RYF CG  GHC+ GMK+ + +A+        GT + TP
Sbjct: 84  TTTIALTTTGPRYFICGIPGHCAAGMKLAVTVASNSSNGVAGGTTTPTP 130

[Close]

BLAST of CmaCh04G029610 vs. NCBI nr
Match: gi|659081467|ref|XP_008441346.1| (PREDICTED: mavicyanin-like [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 4.2e-62
Identity = 126/162 (77.78%), Postives = 145/162 (89.51%), Query Frame = 1


Query: 6   RGLFVV-IAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASG 65
           RG+FV+ I  AA M EMGLADQRH+VGG+QGWQ+S+DFDSWA +QTFKVGDQ+VF Y S 
Sbjct: 11  RGVFVMMIVGAALMAEMGLADQRHMVGGSQGWQESVDFDSWASSQTFKVGDQIVFKYDSS 70

Query: 66  LHSVVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKIKI 125
           LHSVVELP+ES+Y+NCDIG++IESKSSG D IKLTK+GTRYFACGT+GHCSQGMKVKIKI
Sbjct: 71  LHSVVELPEESSYKNCDIGNSIESKSSGNDVIKLTKSGTRYFACGTIGHCSQGMKVKIKI 130

Query: 126 ATGTASSTPSHPSSSASSSFSSHYSLLGCFL-IMAFYALRFM 166
           ATGTASSTPS PSSS+SSS SSHYSL+G FL ++ FY LRFM
Sbjct: 131 ATGTASSTPSSPSSSSSSSSSSHYSLMGFFLMLLPFYVLRFM 172

[Close]

BLAST of CmaCh04G029610 vs. NCBI nr
Match: gi|778673274|ref|XP_004138792.2| (PREDICTED: mavicyanin-like [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 1.8e-57
Identity = 118/159 (74.21%), Postives = 138/159 (86.79%), Query Frame = 1


Query: 8   LFVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGLHS 67
           L ++I  AA M EM LADQRH+VGG+QGWQ+S+DFDSWA +QTFKVGDQ+VF Y S LHS
Sbjct: 16  LVMMIVGAALMAEMSLADQRHMVGGSQGWQESVDFDSWASSQTFKVGDQIVFKYDSSLHS 75

Query: 68  VVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKIKIATG 127
           VVEL DES+Y+NCDIG++IESKSSG D IKLTK+GTRYFACGT+GHCSQGMKVKIKIATG
Sbjct: 76  VVELSDESSYKNCDIGNSIESKSSGNDAIKLTKSGTRYFACGTIGHCSQGMKVKIKIATG 135

Query: 128 TASSTPSHPSSSASSSFSSHYSLLGCFL-IMAFYALRFM 166
           +ASSTPS PSSS+SSS +S YSL+G  L ++ FYALR M
Sbjct: 136 SASSTPSSPSSSSSSSSNSPYSLMGFILTLLPFYALRSM 174

[Close]

BLAST of CmaCh04G029610 vs. NCBI nr
Match: gi|694392368|ref|XP_009371662.1| (PREDICTED: mavicyanin [Pyrus x bretschneideri])

HSP 1 Score: 175.3 bits (443), Expect = 9.1e-41
Identity = 87/136 (63.97%), Postives = 107/136 (78.68%), Query Frame = 1


Query: 8   LFVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGLHS 67
           + +V+  AA + +  LA Q HV GG+QGW+QS + +SWA AQ FKVGDQLVF Y SGLHS
Sbjct: 7   VLLVLVFAALLTKETLASQHHV-GGSQGWEQSTELNSWASAQKFKVGDQLVFKYTSGLHS 66

Query: 68  VVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKIKIATG 127
           VVELP+ESAY++CD GSA+++KSSG D +KLTKAGTRYFACGT GHC QGMK+KI    G
Sbjct: 67  VVELPNESAYKSCDAGSALDTKSSGNDVVKLTKAGTRYFACGTSGHCDQGMKMKITTVDG 126

Query: 128 TASSTPSHPSSSASSS 144
            A S+PS PSSS+S +
Sbjct: 127 NAPSSPSSPSSSSSDA 141

[Close]

BLAST of CmaCh04G029610 vs. NCBI nr
Match: gi|823129003|ref|XP_012445686.1| (PREDICTED: mavicyanin-like [Gossypium raimondii])

HSP 1 Score: 173.7 bits (439), Expect = 2.7e-40
Identity = 80/148 (54.05%), Postives = 114/148 (77.03%), Query Frame = 1


Query: 1   MEGLGRGLFVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFN 60
           MEG+ + +F V+     ++   ++  +HVVGG+QGW++S+D +SWA AQTFKVGDQLVF 
Sbjct: 4   MEGMCK-IFFVLVIVLPLIAKQVSATQHVVGGSQGWEESVDLNSWASAQTFKVGDQLVFK 63

Query: 61  YASGLHSVVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKV 120
           Y+SGLHSVVEL  E+AY+NCD+G++++SK++GKD +KL K GTRYFACGT+GHC QGMK+
Sbjct: 64  YSSGLHSVVELGSETAYKNCDLGTSLDSKNTGKDVVKLNKVGTRYFACGTLGHCDQGMKM 123

Query: 121 KIKIATGTASSTPSHPSSSASSSFSSHY 149
           K+    G A STP+  S +++++F   Y
Sbjct: 124 KVTTVAGNAPSTPASDSDTSAAAFFPRY 150

[Close]

BLAST of CmaCh04G029610 vs. NCBI nr
Match: gi|657974574|ref|XP_008379120.1| (PREDICTED: mavicyanin [Malus domestica])

HSP 1 Score: 173.7 bits (439), Expect = 2.7e-40
Identity = 87/139 (62.59%), Postives = 109/139 (78.42%), Query Frame = 1


Query: 8   LFVVIAAAASMLEMGLADQRHVVGGTQGWQQSIDFDSWAEAQTFKVGDQLVFNYASGLHS 67
           + +V+  AA   +  LA  +HVVGG+QGW++S D +SWA  + FKVGDQLVF Y SGLHS
Sbjct: 7   VLLVLVFAALFTKETLA-AQHVVGGSQGWEESTDLNSWASGEKFKVGDQLVFKYTSGLHS 66

Query: 68  VVELPDESAYENCDIGSAIESKSSGKDGIKLTKAGTRYFACGTMGHCSQGMKVKIKIATG 127
           VVELP+ESAY++C+ GSA++SKSSG D +KLTKAGTRYFACGT+GHC QGMK+KI    G
Sbjct: 67  VVELPNESAYKSCNTGSALDSKSSGNDVVKLTKAGTRYFACGTLGHCGQGMKMKITTVAG 126

Query: 128 TASSTPSHPSSSASSSFSS 147
              S+PS PSSSA++S SS
Sbjct: 127 NTPSSPSSPSSSAAASSSS 144

The following BLAST results are available for this feature:

BLAST of CmaCh04G029610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BCP_PEA	2.3e-20	44.63	Blue copper protein OS=Pisum sativum PE=2 SV=1	[more]
MAVI_CUCPE	5.4e-17	40.57	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	[more]
BCB3_ARATH	9.2e-17	40.17	Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1	[more]
BCB2_ARATH	3.5e-16	36.36	Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1	[more]
BABL_CUCSA	1.0e-12	37.89	Basic blue protein OS=Cucumis sativus PE=1 SV=1	[more]

BLAST of CmaCh04G029610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ69_CUCSA	1.3e-57	74.21	Blue copper protein OS=Cucumis sativus GN=Csa_2G406720 PE=4 SV=1	[more]
A0A0D2M3S8_GOSRA	1.8e-40	54.05	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G270000 PE=4 SV=1	[more]
A0A0B0M606_GOSAR	1.6e-39	54.86	Blue copper OS=Gossypium arboreum GN=F383_16202 PE=4 SV=1	[more]
M5WUJ6_PRUPE	1.6e-39	61.15	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017323mg PE=4 SV=1	[more]
B9RBK2_RICCO	4.6e-39	56.58	Blue copper protein, putative OS=Ricinus communis GN=RCOM_1677760 PE=4 SV=1	[more]

BLAST of CmaCh04G029610 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G27200.1	6.5e-37	54.35	Cupredoxin superfamily protein	[more]
AT2G32300.1	1.8e-18	34.69	uclacyanin 1	[more]
AT3G60280.1	5.2e-18	40.17	uclacyanin 3	[more]
AT2G44790.1	2.0e-17	36.36	uclacyanin 2	[more]
AT1G22480.1	1.3e-16	41.28	Cupredoxin superfamily protein	[more]

BLAST of CmaCh04G029610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081467\|ref\|XP_008441346.1\|	4.2e-62	77.78	PREDICTED: mavicyanin-like [Cucumis melo]	[more]
gi\|778673274\|ref\|XP_004138792.2\|	1.8e-57	74.21	PREDICTED: mavicyanin-like [Cucumis sativus]	[more]
gi\|694392368\|ref\|XP_009371662.1\|	9.1e-41	63.97	PREDICTED: mavicyanin [Pyrus x bretschneideri]	[more]
gi\|823129003\|ref\|XP_012445686.1\|	2.7e-40	54.05	PREDICTED: mavicyanin-like [Gossypium raimondii]	[more]
gi\|657974574\|ref\|XP_008379120.1\|	2.7e-40	62.59	PREDICTED: mavicyanin [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045491	xylan metabolic process
biological_process	GO:0010413	glucuronoxylan metabolic process
biological_process	GO:0045492	xylan biosynthetic process
biological_process	GO:0022900	electron transport chain
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G029610.1	CmaCh04G029610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 58..124 score: 9.0
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 36..118 score: 2.2
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 26..126 score: 35
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 27..126 score: 1.8
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 27..124 score: 4.06
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 1..146 score: 1.3
None	No IPR available	PANTHER	PTHR33021:SF50	SUBFAMILY NOT NAMED	coord: 1..146 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G029610	Cucsa.087690	Cucumber (Gy14) v1	cgycmaB0172
CmaCh04G029610	Cla006511	Watermelon (97103) v1	cmawmB729
CmaCh04G029610	Csa2G406720	Cucumber (Chinese Long) v2	cmacuB693
CmaCh04G029610	MELO3C008198	Melon (DHL92) v3.5.1	cmameB677
CmaCh04G029610	ClCG11G007050	Watermelon (Charleston Gray)	cmawcgB630
CmaCh04G029610	CSPI02G25670	Wild cucumber (PI 183967)	cmacpiB701
CmaCh04G029610	CmoCh04G030820	Cucurbita moschata (Rifu)	cmacmoB729
CmaCh04G029610	Lsi03G003900	Bottle gourd (USVL1VR-Ls)	cmalsiB663
CmaCh04G029610	Cp4.1LG01g25800	Cucurbita pepo (Zucchini)	cmacpeB721
CmaCh04G029610	MELO3C008198.2	Melon (DHL92) v3.6.1	cmamedB760
CmaCh04G029610	CsaV3_2G034170	Cucumber (Chinese Long) v3	cmacucB0824
CmaCh04G029610	Cla97C11G213980	Watermelon (97103) v2	cmawmbB737
CmaCh04G029610	Bhi04G001981	Wax gourd	cmawgoB0870
CmaCh04G029610	CsGy2G025300	Cucumber (Gy14) v2	cgybcmaB246
CmaCh04G029610	Carg06035	Silver-seed gourd	carcmaB0033

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G029610	Melon (DHL92) v3.6.1	cmamedB762
CmaCh04G029610	Silver-seed gourd	carcmaB1403
CmaCh04G029610	Cucumber (Chinese Long) v3	cmacucB0906
CmaCh04G029610	Watermelon (97103) v2	cmawmbB724
CmaCh04G029610	Wax gourd	cmawgoB0860
CmaCh04G029610	Wax gourd	cmawgoB0868
CmaCh04G029610	Cucurbita maxima (Rimu)	cmacmaB320
CmaCh04G029610	Cucurbita maxima (Rimu)	cmacmaB324
CmaCh04G029610	Cucumber (Gy14) v1	cgycmaB0374
CmaCh04G029610	Cucurbita moschata (Rifu)	cmacmoB690
CmaCh04G029610	Cucurbita moschata (Rifu)	cmacmoB692
CmaCh04G029610	Wild cucumber (PI 183967)	cmacpiB777
CmaCh04G029610	Cucumber (Chinese Long) v2	cmacuB768
CmaCh04G029610	Melon (DHL92) v3.5.1	cmameB679
CmaCh04G029610	Watermelon (Charleston Gray)	cmawcgB619
CmaCh04G029610	Watermelon (97103) v1	cmawmB737
CmaCh04G029610	Cucurbita pepo (Zucchini)	cmacpeB705
CmaCh04G029610	Bottle gourd (USVL1VR-Ls)	cmalsiB656
CmaCh04G029610	Cucumber (Gy14) v2	cgybcmaB836