CmaCh04G027320 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G027320
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Matrix metalloproteinase
Location	Cma_Chr04 : 18391340 .. 18391717 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCATACTTGTCGCCGCCATAGCACCTCACGCCATCGTGGCGCGCCATCTTCACACCCACAAGTTGCCTTCGTCTATATTTCCCCAACATCTTGTGGGAAGTGGGAAGGGCCACAACATAGAAGGAATCCACAACGTCAGAGCCTTCCTCCAACGTTATGGTTACTTGAGTCCAAATGTGGAGACCAAAGGCAACGCCTTTGATGACAACTTGGAGTTTGCCATTAAATCATACCAAAAGTTCTTCAACCTCAACGTGAGTGGCATTTTGGATGCGGAGACTTTGGAGCTAATGTCGCAGCCTCGATGTGGAGTTCCCGACGACGGGAACGGGGACAGGGATCACCCCATAGGACTTCATTTTTCAATGATTTGA

mRNA sequence

ATGTTCATACTTGTCGCCGCCATAGCACCTCACGCCATCGTGGCGCGCCATCTTCACACCCACAAGTTGCCTTCGTCTATATTTCCCCAACATCTTGTGGGAAGTGGGAAGGGCCACAACATAGAAGGAATCCACAACGTCAGAGCCTTCCTCCAACGTTATGGTTACTTGAGTCCAAATGTGGAGACCAAAGGCAACGCCTTTGATGACAACTTGGAGTTTGCCATTAAATCATACCAAAAGTTCTTCAACCTCAACGTGAGTGGCATTTTGGATGCGGAGACTTTGGAGCTAATGTCGCAGCCTCGATGTGGAGTTCCCGACGACGGGAACGGGGACAGGGATCACCCCATAGGACTTCATTTTTCAATGATTTGA

Coding sequence (CDS)

ATGTTCATACTTGTCGCCGCCATAGCACCTCACGCCATCGTGGCGCGCCATCTTCACACCCACAAGTTGCCTTCGTCTATATTTCCCCAACATCTTGTGGGAAGTGGGAAGGGCCACAACATAGAAGGAATCCACAACGTCAGAGCCTTCCTCCAACGTTATGGTTACTTGAGTCCAAATGTGGAGACCAAAGGCAACGCCTTTGATGACAACTTGGAGTTTGCCATTAAATCATACCAAAAGTTCTTCAACCTCAACGTGAGTGGCATTTTGGATGCGGAGACTTTGGAGCTAATGTCGCAGCCTCGATGTGGAGTTCCCGACGACGGGAACGGGGACAGGGATCACCCCATAGGACTTCATTTTTCAATGATTTGA

Protein sequence

MFILVAAIAPHAIVARHLHTHKLPSSIFPQHLVGSGKGHNIEGIHNVRAFLQRYGYLSPNVETKGNAFDDNLEFAIKSYQKFFNLNVSGILDAETLELMSQPRCGVPDDGNGDRDHPIGLHFSMI

Homology

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BLAST of CmaCh04G027320 vs. Swiss-Prot
Match: MEP1_SOYBN (Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 6.7e-12
Identity = 34/71 (47.89%), Postives = 45/71 (63.38%), Query Frame = 1


Query: 38  GHNIEGIHNVRAFLQRYGYLSPNVETKGNAFDDNLEFAIKSYQKFFNLNVSGILDAETLE 97
           G N +G+ NV+ +    GY+ PN     + FDD L  AIK+YQK +NLNV+G  D  TL+
Sbjct: 48  GQNYKGLSNVKNYFHHLGYI-PNAPHFDDNFDDTLVSAIKTYQKNYNLNVTGKFDINTLK 107

Query: 98  LMSQPRCGVPD 109
            +  PRCGVPD
Sbjct: 108 QIMTPRCGVPD 117

[Close]

BLAST of CmaCh04G027320 vs. Swiss-Prot
Match: 5MMP_ARATH (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana GN=5MMP PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 1


Query: 32  LVGSGKGHNIEGIHNVRAFLQRYGYLSPNVETKGNA---FDDNLEFAIKSYQKFFNLNVS 91
           L G   G NI G+  ++ + +R+GY++    T GN    FDD L+ AI +YQK FNL V+
Sbjct: 48  LAGCHIGENINGLSKLKQYFRRFGYIT----TTGNCTDDFDDVLQSAINTYQKNFNLKVT 107

Query: 92  GILDAETLELMSQPRCGVPD 109
           G LD+ TL  + +PRCG PD
Sbjct: 108 GKLDSSTLRQIVKPRCGNPD 123

[Close]

BLAST of CmaCh04G027320 vs. Swiss-Prot
Match: 2MMP_ARATH (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-11
Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 1


Query: 31  HLVGSGKGHNIEGIHNVRAFLQRYGYLSPNVETK-GNAFDDNLEFAIKSYQKFFNLNVSG 90
           +  G   G N++G++ ++ + QR+GY+         + FDD L+ A++ YQ  FNLNV+G
Sbjct: 46  NFTGCHHGQNVDGLYRIKKYFQRFGYIPETFSGNFTDDFDDILKAAVELYQTNFNLNVTG 105

Query: 91  ILDAETLELMSQPRCGVPDDGNG 113
            LDA T++ +  PRCG PD  NG
Sbjct: 106 ELDALTIQHIVIPRCGNPDVVNG 128

[Close]

BLAST of CmaCh04G027320 vs. Swiss-Prot
Match: 1MMP_ARATH (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana GN=1MMP PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.8e-10
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 1


Query: 38  GHNIEGIHNVRAFLQRYGYLSPNVETKGNAFDDNLEFAIKSYQKFFNLNVSGILDAETLE 97
           G ++ G+  ++ +L R+GY++   E   + FD  LE AI  YQ+   L ++G LD  T+ 
Sbjct: 64  GSHVSGVSELKRYLHRFGYVNDGSEIFSDVFDGPLESAISLYQENLGLPITGRLDTSTVT 123

Query: 98  LMSQPRCGVPD 109
           LMS PRCGV D
Sbjct: 124 LMSLPRCGVSD 134

[Close]

BLAST of CmaCh04G027320 vs. Swiss-Prot
Match: 3MMP_ARATH (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana GN=3MMP PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-09
Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 1


Query: 31  HLVGSGKGHNIEGIHNVRAFLQRYGYLSPNVETKGNA---FDDNLEFAIKSYQKFFNLNV 90
           +  G   G   +G++ ++ + Q +GY++      GN    FDD L+ A++ YQ+ F LNV
Sbjct: 48  NFTGCHAGKKYDGLYMLKQYFQHFGYIT-ETNLSGNFTDDFDDILKNAVEMYQRNFQLNV 107

Query: 91  SGILDAETLELMSQPRCGVPDDGNG 113
           +G+LD  TL+ +  PRCG PD  NG
Sbjct: 108 TGVLDELTLKHVVIPRCGNPDVVNG 131

[Close]

BLAST of CmaCh04G027320 vs. TrEMBL
Match: A0A0A0KVC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632060 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.2e-27
Identity = 67/109 (61.47%), Postives = 80/109 (73.39%), Query Frame = 1


Query: 3   ILVAAIAPHAIVARHLHTHKLPSSIFPQHLVGSGKGHNI-EGIHNVRAFLQRYGYLSPNV 62
           +L+A I PH   ARHLH  K    +FP+HL+GS K  +I EGIH V+A+LQRYGYLS   
Sbjct: 11  LLLAFITPHLTSARHLHNRKPSPFLFPKHLIGSSKNDSIVEGIHKVKAYLQRYGYLSNEN 70

Query: 63  ETK--GNAFDDNLEFAIKSYQKFFNLNVSGILDAETLELMSQPRCGVPD 109
           E K   +AFDD+LE AIKSYQKF NL VSG+LD ETL+ MS+PRCGV D
Sbjct: 71  EKKLSTDAFDDDLESAIKSYQKFSNLKVSGVLDRETLQQMSRPRCGVRD 119

[Close]

BLAST of CmaCh04G027320 vs. TrEMBL
Match: A0A0A0KS35_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632070 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.2e-27
Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = 1


Query: 1   MFILVAAIAPHAIVARHLHTHKLPSSIFPQHLVGSGKGHNI-EGIHNVRAFLQRYGYLSP 60
           +F+L+A + PH   AR LH HK    +FP+HL+GS K  +I EGIH V+A+LQRYGY S 
Sbjct: 9   LFLLLAFVTPHLTSARPLHNHKSSRLLFPEHLIGSSKNDSIVEGIHKVKAYLQRYGYFSN 68

Query: 61  NVETK--GNAFDDNLEFAIKSYQKFFNLNVSGILDAETLELMSQPRCGVPDD 110
             E     +AFDD+LE AIKSYQKF NL VSG+LD ETL+ MS+PRCGV D+
Sbjct: 69  ENENNLSTDAFDDDLESAIKSYQKFSNLKVSGVLDRETLQQMSRPRCGVADN 120

[Close]

BLAST of CmaCh04G027320 vs. TrEMBL
Match: A0A0A0KS15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632090 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.3e-26
Identity = 67/114 (58.77%), Postives = 79/114 (69.30%), Query Frame = 1


Query: 1   MFILVAAIAPHAIVARHLHTHKLPSSIFPQHLVGSGKGHNIEGIHNVRAFLQRYGYLSPN 60
           + +L+A+IA   I AR LH  K    +FPQHL+GS KGHNIEGIH ++  LQRYGYLS N
Sbjct: 13  LLLLLASIAFPFIWARDLHDIKKSQLLFPQHLLGSSKGHNIEGIHTIKMHLQRYGYLSKN 72

Query: 61  ---VETKG---NAFDDNLEFAIKSYQKFFNLNVSGILDAETLELMSQPRCGVPD 109
              ++T G   NAFDD+LE AIK YQ FF L  SG+LD ETL  MSQ RC VPD
Sbjct: 73  YNIIDTNGAYNNAFDDHLESAIKKYQMFFKLPKSGVLDMETLHQMSQARCSVPD 126

[Close]

BLAST of CmaCh04G027320 vs. TrEMBL
Match: A0A0A0KU02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632080 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-24
Identity = 63/110 (57.27%), Postives = 80/110 (72.73%), Query Frame = 1


Query: 1   MFILVAAIAPHAIVARHLHTHKLPSSIFPQHLVGSGKGHNIEGIHNVRAFLQRYGYLSPN 60
           +F+L+A+IAPH I AR  HTH         HL GS  G+NIEGIHNV+ +L+RYGYL+ N
Sbjct: 9   LFLLIASIAPHVITARVRHTH------ISSHLQGSRIGNNIEGIHNVKLYLKRYGYLT-N 68

Query: 61  VET--KGNAFDDNLEFAIKSYQKFFNLNVSGILDAETLELMSQPRCGVPD 109
           VE+    N FD  LE AIK++QK+ +LNVSG++D ETL LMS PRCG+PD
Sbjct: 69  VESTNSNNTFDVLLESAIKTFQKYHSLNVSGVIDEETLTLMSLPRCGIPD 111

[Close]

BLAST of CmaCh04G027320 vs. TrEMBL
Match: A0A0A0KX75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632100 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.9e-23
Identity = 59/115 (51.30%), Postives = 77/115 (66.96%), Query Frame = 1


Query: 1   MFILVAAIAPHAIVARHL-HTHKLPSSIFPQHLVGSGKGHNIEGIHNVRAFLQRYGYLSP 60
           + +L   +  H I +R L H H     +FP++L+GS KGHN+EG H ++ +LQRYGYLS 
Sbjct: 12  LLLLTFLLLFHPISSRDLNHIHGPSQFLFPKYLIGSRKGHNLEGTHTIKTYLQRYGYLSK 71

Query: 61  N---VETKG---NAFDDNLEFAIKSYQKFFNLNVSGILDAETLELMSQPRCGVPD 109
           +   ++T G   NA+D+ LE +IK YQKFF LN SGILD ETL  MSQ RC VPD
Sbjct: 72  SYNIIDTNGVYNNAYDEQLESSIKKYQKFFQLNQSGILDTETLRQMSQSRCSVPD 126

[Close]

BLAST of CmaCh04G027320 vs. TAIR10
Match: AT1G59970.1 (AT1G59970.1 Matrixin family protein)

HSP 1 Score: 70.9 bits (172), Expect = 6.5e-13
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 1


Query: 32  LVGSGKGHNIEGIHNVRAFLQRYGYLSPNVETKGNA---FDDNLEFAIKSYQKFFNLNVS 91
           L G   G NI G+  ++ + +R+GY++    T GN    FDD L+ AI +YQK FNL V+
Sbjct: 48  LAGCHIGENINGLSKLKQYFRRFGYIT----TTGNCTDDFDDVLQSAINTYQKNFNLKVT 107

Query: 92  GILDAETLELMSQPRCGVPD 109
           G LD+ TL  + +PRCG PD
Sbjct: 108 GKLDSSTLRQIVKPRCGNPD 123

[Close]

BLAST of CmaCh04G027320 vs. TAIR10
Match: AT1G70170.1 (AT1G70170.1 matrix metalloproteinase)

HSP 1 Score: 69.7 bits (169), Expect = 1.4e-12
Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 1


Query: 31  HLVGSGKGHNIEGIHNVRAFLQRYGYLSPNVETK-GNAFDDNLEFAIKSYQKFFNLNVSG 90
           +  G   G N++G++ ++ + QR+GY+         + FDD L+ A++ YQ  FNLNV+G
Sbjct: 46  NFTGCHHGQNVDGLYRIKKYFQRFGYIPETFSGNFTDDFDDILKAAVELYQTNFNLNVTG 105

Query: 91  ILDAETLELMSQPRCGVPDDGNG 113
            LDA T++ +  PRCG PD  NG
Sbjct: 106 ELDALTIQHIVIPRCGNPDVVNG 128

[Close]

BLAST of CmaCh04G027320 vs. TAIR10
Match: AT4G16640.1 (AT4G16640.1 Matrixin family protein)

HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 1


Query: 38  GHNIEGIHNVRAFLQRYGYLSPNVETKGNAFDDNLEFAIKSYQKFFNLNVSGILDAETLE 97
           G ++ G+  ++ +L R+GY++   E   + FD  LE AI  YQ+   L ++G LD  T+ 
Sbjct: 64  GSHVSGVSELKRYLHRFGYVNDGSEIFSDVFDGPLESAISLYQENLGLPITGRLDTSTVT 123

Query: 98  LMSQPRCGVPD 109
           LMS PRCGV D
Sbjct: 124 LMSLPRCGVSD 134

[Close]

BLAST of CmaCh04G027320 vs. TAIR10
Match: AT1G24140.1 (AT1G24140.1 Matrixin family protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10
Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 1


Query: 31  HLVGSGKGHNIEGIHNVRAFLQRYGYLSPNVETKGNA---FDDNLEFAIKSYQKFFNLNV 90
           +  G   G   +G++ ++ + Q +GY++      GN    FDD L+ A++ YQ+ F LNV
Sbjct: 48  NFTGCHAGKKYDGLYMLKQYFQHFGYIT-ETNLSGNFTDDFDDILKNAVEMYQRNFQLNV 107

Query: 91  SGILDAETLELMSQPRCGVPDDGNG 113
           +G+LD  TL+ +  PRCG PD  NG
Sbjct: 108 TGVLDELTLKHVVIPRCGNPDVVNG 131

[Close]

BLAST of CmaCh04G027320 vs. TAIR10
Match: AT2G45040.1 (AT2G45040.1 Matrixin family protein)

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-07
Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 1


Query: 44  IHNVRAFLQRYGYLSPNVETKGNAFDDNLEFAIKSYQKFFNLNVSGILDAETLELMSQPR 103
           I  ++  LQ+YGYL  N E+     D + E A+  YQK   L ++G  D++TL  +  PR
Sbjct: 50  IPEIKRHLQQYGYLPQNKESD----DVSFEQALVRYQKNLGLPITGKPDSDTLSQILLPR 109

Query: 104 CGVPDD 110
           CG PDD
Sbjct: 110 CGFPDD 111

[Close]

BLAST of CmaCh04G027320 vs. NCBI nr
Match: gi|659118025|ref|XP_008458911.1| (PREDICTED: metalloendoproteinase 1-like [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 6.1e-29
Identity = 67/111 (60.36%), Postives = 80/111 (72.07%), Query Frame = 1


Query: 1   MFILVAAIAPHAIVARHLHTHKLPSSIFPQHLVGSGKGHNIEGIHNVRAFLQRYGYLSPN 60
           +F+L A I PH   ARHL  HK    +FP+HL+GS K  N EGIH V+A+LQRYGYLS  
Sbjct: 9   LFLLFAFITPHLTSARHLRNHKPSRLLFPEHLIGSRKNDNFEGIHKVKAYLQRYGYLSDE 68

Query: 61  VET--KGNAFDDNLEFAIKSYQKFFNLNVSGILDAETLELMSQPRCGVPDD 110
            E     +AFDD+LE AIKSYQK F LNVSG+LD ETL+ M++PRCGV DD
Sbjct: 69  KENNLSIDAFDDDLESAIKSYQKVFKLNVSGVLDRETLQQMARPRCGVTDD 119

[Close]

BLAST of CmaCh04G027320 vs. NCBI nr
Match: gi|659118027|ref|XP_008458912.1| (PREDICTED: metalloendoproteinase 1-like [Cucumis melo])

HSP 1 Score: 129.0 bits (323), Expect = 5.7e-27
Identity = 66/111 (59.46%), Postives = 80/111 (72.07%), Query Frame = 1


Query: 1   MFILVAAIAPHAIVARHLHTHKLPSSIFPQHLVGSGKGHNI-EGIHNVRAFLQRYGYLSP 60
           +F+L+A I PH   ARHLH HK    +FP+HL+GS K  +I EGIH V+A+LQRYGYLS 
Sbjct: 9   LFLLLAFITPHLTSARHLHNHKPSPFLFPKHLIGSSKNDSIVEGIHKVKAYLQRYGYLSN 68

Query: 61  NVETK--GNAFDDNLEFAIKSYQKFFNLNVSGILDAETLELMSQPRCGVPD 109
             E     +AFDD+LE AIKSYQKF  + VSG+LD ETL+ MS PRCGV D
Sbjct: 69  ENENNLSTDAFDDDLESAIKSYQKFSKIKVSGVLDRETLQQMSTPRCGVRD 119

[Close]

BLAST of CmaCh04G027320 vs. NCBI nr
Match: gi|449449429|ref|XP_004142467.1| (PREDICTED: matrix metalloproteinase-9-like [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 7.4e-27
Identity = 67/109 (61.47%), Postives = 80/109 (73.39%), Query Frame = 1


Query: 3   ILVAAIAPHAIVARHLHTHKLPSSIFPQHLVGSGKGHNI-EGIHNVRAFLQRYGYLSPNV 62
           +L+A I PH   ARHLH  K    +FP+HL+GS K  +I EGIH V+A+LQRYGYLS   
Sbjct: 11  LLLAFITPHLTSARHLHNRKPSPFLFPKHLIGSSKNDSIVEGIHKVKAYLQRYGYLSNEN 70

Query: 63  ETK--GNAFDDNLEFAIKSYQKFFNLNVSGILDAETLELMSQPRCGVPD 109
           E K   +AFDD+LE AIKSYQKF NL VSG+LD ETL+ MS+PRCGV D
Sbjct: 71  EKKLSTDAFDDDLESAIKSYQKFSNLKVSGVLDRETLQQMSRPRCGVRD 119

[Close]

BLAST of CmaCh04G027320 vs. NCBI nr
Match: gi|778708735|ref|XP_004142466.2| (PREDICTED: metalloendoproteinase 1-like [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 7.4e-27
Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = 1


Query: 1   MFILVAAIAPHAIVARHLHTHKLPSSIFPQHLVGSGKGHNI-EGIHNVRAFLQRYGYLSP 60
           +F+L+A + PH   AR LH HK    +FP+HL+GS K  +I EGIH V+A+LQRYGY S 
Sbjct: 9   LFLLLAFVTPHLTSARPLHNHKSSRLLFPEHLIGSSKNDSIVEGIHKVKAYLQRYGYFSN 68

Query: 61  NVETK--GNAFDDNLEFAIKSYQKFFNLNVSGILDAETLELMSQPRCGVPDD 110
             E     +AFDD+LE AIKSYQKF NL VSG+LD ETL+ MS+PRCGV D+
Sbjct: 69  ENENNLSTDAFDDDLESAIKSYQKFSNLKVSGVLDRETLQQMSRPRCGVADN 120

[Close]

BLAST of CmaCh04G027320 vs. NCBI nr
Match: gi|659118033|ref|XP_008458915.1| (PREDICTED: metalloendoproteinase 1-like [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-26
Identity = 66/111 (59.46%), Postives = 81/111 (72.97%), Query Frame = 1


Query: 1   MFILVAAIAPHAIVARHLHTHKLPSSIFPQHLVGSGKGHNI-EGIHNVRAFLQRYGYLSP 60
           +F+L+A I PH I ARH H HKL   +FP+HL+GS K  +I EGIH V+A+LQRYGYLS 
Sbjct: 9   LFLLLAFIMPHLISARHFHNHKLSRLLFPEHLIGSSKNDSIVEGIHKVKAYLQRYGYLSN 68

Query: 61  NVETK--GNAFDDNLEFAIKSYQKFFNLNVSGILDAETLELMSQPRCGVPD 109
             +     +AFDD+LE AIKSYQKF NL VSG+LD +TLE M + RCGV D
Sbjct: 69  ENDNNLSTDAFDDDLESAIKSYQKFSNLKVSGVLDRKTLEHMYKFRCGVKD 119

The following BLAST results are available for this feature:

BLAST of CmaCh04G027320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MEP1_SOYBN	6.7e-12	47.89	Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2	[more]
5MMP_ARATH	1.1e-11	45.00	Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana GN=5MMP PE=1 SV=1	[more]
2MMP_ARATH	2.6e-11	39.76	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1	[more]
1MMP_ARATH	4.8e-10	40.85	Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana GN=1MMP PE=1 SV=1	[more]
3MMP_ARATH	3.1e-09	37.65	Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana GN=3MMP PE=1 SV=1	[more]

BLAST of CmaCh04G027320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVC8_CUCSA	5.2e-27	61.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632060 PE=3 SV=1	[more]
A0A0A0KS35_CUCSA	5.2e-27	58.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632070 PE=3 SV=1	[more]
A0A0A0KS15_CUCSA	3.3e-26	58.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632090 PE=3 SV=1	[more]
A0A0A0KU02_CUCSA	1.4e-24	57.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632080 PE=3 SV=1	[more]
A0A0A0KX75_CUCSA	5.9e-23	51.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632100 PE=3 SV=1	[more]

BLAST of CmaCh04G027320 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G59970.1	6.5e-13	45.00	Matrixin family protein	[more]
AT1G70170.1	1.4e-12	39.76	matrix metalloproteinase	[more]
AT4G16640.1	2.7e-11	40.85	Matrixin family protein	[more]
AT1G24140.1	1.8e-10	37.65	Matrixin family protein	[more]
AT2G45040.1	1.8e-07	40.91	Matrixin family protein	[more]

BLAST of CmaCh04G027320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118025\|ref\|XP_008458911.1\|	6.1e-29	60.36	PREDICTED: metalloendoproteinase 1-like [Cucumis melo]	[more]
gi\|659118027\|ref\|XP_008458912.1\|	5.7e-27	59.46	PREDICTED: metalloendoproteinase 1-like [Cucumis melo]	[more]
gi\|449449429\|ref\|XP_004142467.1\|	7.4e-27	61.47	PREDICTED: matrix metalloproteinase-9-like [Cucumis sativus]	[more]
gi\|778708735\|ref\|XP_004142466.2\|	7.4e-27	58.04	PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]	[more]
gi\|659118033\|ref\|XP_008458915.1\|	1.3e-26	59.46	PREDICTED: metalloendoproteinase 1-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002477	Peptidoglycan-bd-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0031012	extracellular matrix
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G027320.1	CmaCh04G027320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002477	Peptidoglycan binding-like	GENE3D	G3DSA:1.10.101.10		coord: 44..108 score: 1.3
IPR002477	Peptidoglycan binding-like	PFAM	PF01471	PG_binding_1	coord: 42..99 score: 1.1
IPR002477	Peptidoglycan binding-like	unknown	SSF47090	PGBD-like	coord: 37..108 score: 7.98
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 6..114 score: 7.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G027320	CSPI05G28510	Wild cucumber (PI 183967)	cmacpiB730
CmaCh04G027320	Lsi02G015280	Bottle gourd (USVL1VR-Ls)	cmalsiB651
CmaCh04G027320	MELO3C021497.2	Melon (DHL92) v3.6.1	cmamedB720
CmaCh04G027320	CsGy5G027850	Cucumber (Gy14) v2	cgybcmaB647

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G027320	Cucumber (Chinese Long) v3	cmacucB0818
CmaCh04G027320	Cucumber (Chinese Long) v3	cmacucB0839
CmaCh04G027320	Cucumber (Chinese Long) v3	cmacucB0860
CmaCh04G027320	Watermelon (97103) v2	cmawmbB714
CmaCh04G027320	Watermelon (97103) v2	cmawmbB797
CmaCh04G027320	Wax gourd	cmawgoB0839
CmaCh04G027320	Cucurbita maxima (Rimu)	cmacmaB324
CmaCh04G027320	Cucurbita maxima (Rimu)	cmacmaB409
CmaCh04G027320	Cucumber (Gy14) v1	cgycmaB0441
CmaCh04G027320	Cucumber (Gy14) v1	cgycmaB0939
CmaCh04G027320	Cucurbita moschata (Rifu)	cmacmoB692
CmaCh04G027320	Cucurbita moschata (Rifu)	cmacmoB729
CmaCh04G027320	Wild cucumber (PI 183967)	cmacpiB711
CmaCh04G027320	Cucumber (Chinese Long) v2	cmacuB704
CmaCh04G027320	Cucumber (Chinese Long) v2	cmacuB723
CmaCh04G027320	Melon (DHL92) v3.5.1	cmameB634
CmaCh04G027320	Melon (DHL92) v3.5.1	cmameB685
CmaCh04G027320	Watermelon (Charleston Gray)	cmawcgB608
CmaCh04G027320	Watermelon (97103) v1	cmawmB652
CmaCh04G027320	Cucurbita pepo (Zucchini)	cmacpeB705
CmaCh04G027320	Cucurbita pepo (Zucchini)	cmacpeB721
CmaCh04G027320	Bottle gourd (USVL1VR-Ls)	cmalsiB655
CmaCh04G027320	Bottle gourd (USVL1VR-Ls)	cmalsiB658
CmaCh04G027320	Cucumber (Gy14) v2	cgybcmaB132
CmaCh04G027320	Cucumber (Gy14) v2	cgybcmaB418
CmaCh04G027320	Melon (DHL92) v3.6.1	cmamedB750
CmaCh04G027320	Melon (DHL92) v3.6.1	cmamedB769
CmaCh04G027320	Silver-seed gourd	carcmaB0374
CmaCh04G027320	Silver-seed gourd	carcmaB0967