CmaCh04G021620 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G021620
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDefensin-like protein 1
LocationCma_Chr04 : 15159389 .. 15160330 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAACAGTGTTTACACTCTGTATGTGAATAAGAGTGTAGATGAGAATGTGGTGGGGACTGAGGGAATTGAAAGACAGCTCAAAAAACCCAAATCATATGGATCATGGAGGAATGGAGATCTAAAGCTTCCACAGCACATAGTGCTCTATGACTCACTCAATCTTCACTTTTAATCTTCTTTTCTGGATCATTCTTATGCTAATATAAACCGCTTTCCACATTCACTCATTCAACACAAAATCCTCTCTTACTCTCTGTGAATATGAAGTTCTTTTCTGCTGCAATTCTGCTGCTCCTGCTGCTTCTTGCCACTGGTTTGTGTTTTTGTTCTTTTTGTTTTGTTGTTAATGAAAACTCATCGAAGCTTAACGATTAAAATGGTTGATTTGGTCCAGGAATGGCGCCAATGGCTACAGAGGCAAGGACATGCGAGTCTCCGAGCCACCACTTCAGGGGGTTGTGCTTCAGTAAGAACAACTGCGGCCATGTCTGCAAGACAGAGGGCTTCCATGGTGGGCATTGCAGAGGCTTCCGCCGCCGCTGCTTCTGCACAAAGCACTGTGTTTGAATGGTCTTTGTTGTTTCAAATCAGTTGTCTATCAGTCGAAGTAGGCACTGATGAGACCTTTATAGGAGTGGTAATATACAATAAAAGTTGCCATCTTTTGAGTATTGTTGTTTTGTGTAAGCGCTTTGCTTCATTTTCTTTGGCGTATTTGATACTTCGTTTCTGTAAGGCTTTTAACAAAGAGGTTCACTAAAGTATTTGGCCCATGGGGTTTAAGCATCCAACTCCACCCACTCCTTAATATTAACTCCCTCCATCTACATTTTAACCAAAGATATCTCGTCCTGCGGGGACATGTCCTGAAAAGAGAGTGGGAACCATTTTTCAAATGGGGTTAGGGATGAGATTATATTATCTGCCTCCACCCCATCCCCG

mRNA sequence

TAACAGTGTTTACACTCTGTATGTGAATAAGAGTGTAGATGAGAATGTGGTGGGGACTGAGGGAATTGAAAGACAGCTCAAAAAACCCAAATCATATGGATCATGGAGGAATGGAGATCTAAAGCTTCCACAGCACATAGTGCTCTATGACTCACTCAATCTTCACTTTTAATCTTCTTTTCTGGATCATTCTTATGCTAATATAAACCGCTTTCCACATTCACTCATTCAACACAAAATCCTCTCTTACTCTCTGTGAATATGAAGTTCTTTTCTGCTGCAATTCTGCTGCTCCTGCTGCTTCTTGCCACTGGAATGGCGCCAATGGCTACAGAGGCAAGGACATGCGAGTCTCCGAGCCACCACTTCAGGGGGTTGTGCTTCAGTAAGAACAACTGCGGCCATGTCTGCAAGACAGAGGGCTTCCATGGTGGGCATTGCAGAGGCTTCCGCCGCCGCTGCTTCTGCACAAAGCACTGTGTTTGAATGGTCTTTGTTGTTTCAAATCAGTTGTCTATCAGTCGAAGTAGGCACTGATGAGACCTTTATAGGAGTGGTAATATACAATAAAAGTTGCCATCTTTTGAGTATTGTTGTTTTGTGTAAGCGCTTTGCTTCATTTTCTTTGGCGTATTTGATACTTCGTTTCTGTAAGGCTTTTAACAAAGAGGTTCACTAAAGTATTTGGCCCATGGGGTTTAAGCATCCAACTCCACCCACTCCTTAATATTAACTCCCTCCATCTACATTTTAACCAAAGATATCTCGTCCTGCGGGGACATGTCCTGAAAAGAGAGTGGGAACCATTTTTCAAATGGGGTTAGGGATGAGATTATATTATCTGCCTCCACCCCATCCCCG

Coding sequence (CDS)

ATGAAGTTCTTTTCTGCTGCAATTCTGCTGCTCCTGCTGCTTCTTGCCACTGGAATGGCGCCAATGGCTACAGAGGCAAGGACATGCGAGTCTCCGAGCCACCACTTCAGGGGGTTGTGCTTCAGTAAGAACAACTGCGGCCATGTCTGCAAGACAGAGGGCTTCCATGGTGGGCATTGCAGAGGCTTCCGCCGCCGCTGCTTCTGCACAAAGCACTGTGTTTGA

Protein sequence

MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
Homology
[Close]
BLAST of CmaCh04G021620 vs. Swiss-Prot
Match: DEF2_CAPAN (Defensin J1-2 OS=Capsicum annuum PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 8.6e-23
Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 1 

Query: 2  KFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHCR 61
          K  +   L+++L+ ATGM     EARTCES SH F+GLCFSK+NCG VC TEGF+GGHCR
Sbjct: 6  KVIATIFLMMMLVFATGMV---AEARTCESQSHRFKGLCFSKSNCGSVCHTEGFNGGHCR 65

Query: 62 GFRRRCFCTKHC 74
          GFRRRCFCT+HC
Sbjct: 66 GFRRRCFCTRHC 74

[Close]
BLAST of CmaCh04G021620 vs. Swiss-Prot
Match: DEF01_ARATH (Defensin-like protein 1 OS=Arabidopsis thaliana GN=PDF2.3 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.2e-22
Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          ++F SAA+LL ++ +ATGM P+  EARTCES SH F+G C S +NC +VC  EGF GG C
Sbjct: 5  VRFISAALLLFMVFIATGMGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFGGGKC 64

Query: 61 RGFRRRCFCTKHC 74
          RGFRRRC+CT+HC
Sbjct: 65 RGFRRRCYCTRHC 77

[Close]
BLAST of CmaCh04G021620 vs. Swiss-Prot
Match: DEF02_ARATH (Defensin-like protein 2 OS=Arabidopsis thaliana GN=PDF2.2 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.2e-21
Identity = 43/73 (58.90%), Postives = 56/73 (76.71%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          M+  SA +++ ++ +ATGM P+  EARTCES SH F+G C S +NC +VC  EGF GG+C
Sbjct: 5  MRLISAVLIMFMIFVATGMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGFVGGNC 64

Query: 61 RGFRRRCFCTKHC 74
          RGFRRRCFCT+HC
Sbjct: 65 RGFRRRCFCTRHC 77

[Close]
BLAST of CmaCh04G021620 vs. Swiss-Prot
Match: DEF_NELNU (Defensin-like protein OS=Nelumbo nucifera PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.5e-19
Identity = 43/73 (58.90%), Postives = 51/73 (69.86%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          M+ FS+ +L+LLL+ AT M P   EARTCES SH F+G C S  NC  VC+TEGF  G C
Sbjct: 5  MRLFSSLVLVLLLVTATEMGPKVAEARTCESQSHRFKGACLSDTNCASVCQTEGFPAGDC 64

Query: 61 RGFRRRCFCTKHC 74
          +G RRRCFC K C
Sbjct: 65 KGARRRCFCVKPC 77

[Close]
BLAST of CmaCh04G021620 vs. Swiss-Prot
Match: DFSD2_HELAN (Defensin SD2 OS=Helianthus annuus GN=SD2 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.5e-19
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMA-PMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGH 60
          MK F+A +L+++ LLA  M  P+  EARTCES SH F+G C S  NC +VC +E F GG 
Sbjct: 5  MKMFAALLLVVMCLLANEMGGPLVVEARTCESQSHKFKGTCLSDTNCANVCHSERFSGGK 64

Query: 61 CRGFRRRCFCTKHC 74
          CRGFRRRCFCT HC
Sbjct: 65 CRGFRRRCFCTTHC 78

[Close]
BLAST of CmaCh04G021620 vs. TrEMBL
Match: V5LEQ8_CITLA (Defensin-like protein 1 OS=Citrullus lanatus GN=PDF2.1 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.6e-34
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          MKFFSAAILLLLLLLATGM PM T+ARTCESPS HF+GLCFSKNNCGHVCKTEGFHGGHC
Sbjct: 1  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHC 60

Query: 61 RGFRRRCFCTKHCV 75
          RGFRRRCFCTKHCV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmaCh04G021620 vs. TrEMBL
Match: A0A0A0KJ50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G114570 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.7e-33
Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          M FFSAAI LLLLLL TGM PM TEARTCESPSH F+GLCFSKNNCGHVCKTEGFHGGHC
Sbjct: 1  MNFFSAAIFLLLLLLGTGMGPMVTEARTCESPSHRFKGLCFSKNNCGHVCKTEGFHGGHC 60

Query: 61 RGFRRRCFCTKHCV 75
          RGFRRRCFCTKHCV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmaCh04G021620 vs. TrEMBL
Match: V5LF72_CITLA (Defensin-like protein 6 OS=Citrullus lanatus GN=PDF2.6 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 7.5e-26
Identity = 57/74 (77.03%), Postives = 62/74 (83.78%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          MKFFSAAILLLLL+  TGM P+  EAR CES SH F+GLCFS  NCG++CKTEGF GG C
Sbjct: 1  MKFFSAAILLLLLIFGTGMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVC 60

Query: 61 RGFRRRCFCTKHCV 75
          RGFRRRCFCTKHCV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmaCh04G021620 vs. TrEMBL
Match: V5LFZ0_CITLA (Defensin-like protein 5 OS=Citrullus lanatus GN=PDF2.5 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-24
Identity = 56/74 (75.68%), Postives = 61/74 (82.43%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          MKFFSAAILLLLL+  TGM P+  EAR CES SH F+GLCFS  NCG++CKTEGF GG C
Sbjct: 1  MKFFSAAILLLLLIFGTGMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVC 60

Query: 61 RGFRRRCFCTKHCV 75
          RGFRRRCFCTK CV
Sbjct: 61 RGFRRRCFCTKPCV 74

[Close]
BLAST of CmaCh04G021620 vs. TrEMBL
Match: A0A061E8D1_THECC (Defensin-like protein isoform 2 OS=Theobroma cacao GN=TCM_011133 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 4.6e-23
Identity = 51/72 (70.83%), Postives = 58/72 (80.56%), Query Frame = 1 

Query: 2  KFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHCR 61
          + FSAA +LLLLLLAT M P A EARTC+S SH F+G+C  K+NC  VC+TEGFH GHCR
Sbjct: 6  RLFSAAFVLLLLLLATEMGPKAAEARTCQSQSHRFKGMCMRKSNCAAVCQTEGFHSGHCR 65

Query: 62 GFRRRCFCTKHC 74
          GF RRCFCTKHC
Sbjct: 66 GFHRRCFCTKHC 77

[Close]
BLAST of CmaCh04G021620 vs. TAIR10
Match: AT2G02130.1 (AT2G02130.1 low-molecular-weight cysteine-rich 68)

HSP 1 Score: 104.8 bits (260), Expect = 2.4e-23
Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          ++F SAA+LL ++ +ATGM P+  EARTCES SH F+G C S +NC +VC  EGF GG C
Sbjct: 5  VRFISAALLLFMVFIATGMGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFGGGKC 64

Query: 61 RGFRRRCFCTKHC 74
          RGFRRRC+CT+HC
Sbjct: 65 RGFRRRCYCTRHC 77

[Close]
BLAST of CmaCh04G021620 vs. TAIR10
Match: AT2G02100.1 (AT2G02100.1 low-molecular-weight cysteine-rich 69)

HSP 1 Score: 103.2 bits (256), Expect = 7.0e-23
Identity = 43/73 (58.90%), Postives = 56/73 (76.71%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          M+  SA +++ ++ +ATGM P+  EARTCES SH F+G C S +NC +VC  EGF GG+C
Sbjct: 5  MRLISAVLIMFMIFVATGMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGFVGGNC 64

Query: 61 RGFRRRCFCTKHC 74
          RGFRRRCFCT+HC
Sbjct: 65 RGFRRRCFCTRHC 77

[Close]
BLAST of CmaCh04G021620 vs. TAIR10
Match: AT2G02120.1 (AT2G02120.1 Scorpion toxin-like knottin superfamily protein)

HSP 1 Score: 93.6 bits (231), Expect = 5.5e-20
Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          M+  SA + L+++ +ATGM P+  EARTC S S  F+G C S  NC +VC  EGF GG C
Sbjct: 5  MRLISAVLFLVMIFVATGMGPVTVEARTCASQSQRFKGKCVSDTNCENVCHNEGFPGGDC 64

Query: 61 RGFRRRCFCTKHC 74
          RGFRRRCFCT++C
Sbjct: 65 RGFRRRCFCTRNC 77

[Close]
BLAST of CmaCh04G021620 vs. TAIR10
Match: AT1G61070.1 (AT1G61070.1 low-molecular-weight cysteine-rich 66)

HSP 1 Score: 82.4 bits (202), Expect = 1.3e-16
Identity = 38/69 (55.07%), Postives = 49/69 (71.01%), Query Frame = 1 

Query: 5  SAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHCRGFR 64
          ++A+LLL ++LAT M  +  EARTCE+ S+ F G C S +NC +VC  EGF  G CRGFR
Sbjct: 8  NSALLLLFMILATVMGLVTVEARTCETSSNLFNGPCLSSSNCANVCHNEGFSDGDCRGFR 67

Query: 65 RRCFCTKHC 74
          RRC CT+ C
Sbjct: 68 RRCLCTRPC 76

[Close]
BLAST of CmaCh04G021620 vs. TAIR10
Match: AT5G63660.1 (AT5G63660.1 Scorpion toxin-like knottin superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-15
Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 1 

Query: 2  KFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHCR 61
          KFF+A  LLL+L  +  +  +  E RTC+S SHHF+ +C S +NC  VC+ EGF GG C 
Sbjct: 4  KFFAAFFLLLVLFSSQEI--IGGEGRTCQSKSHHFKYMCTSNHNCAIVCRNEGFSGGRCH 63

Query: 62 GFRRRCFCTKHC 74
          GF RRC+CT+ C
Sbjct: 64 GFHRRCYCTRLC 73

[Close]
BLAST of CmaCh04G021620 vs. NCBI nr
Match: gi|558067078|gb|AHA50470.1| (defensin-like protein 1 [Citrullus lanatus])

HSP 1 Score: 152.1 bits (383), Expect = 3.7e-34
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          MKFFSAAILLLLLLLATGM PM T+ARTCESPS HF+GLCFSKNNCGHVCKTEGFHGGHC
Sbjct: 1  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHC 60

Query: 61 RGFRRRCFCTKHCV 75
          RGFRRRCFCTKHCV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmaCh04G021620 vs. NCBI nr
Match: gi|778698443|ref|XP_011654535.1| (PREDICTED: defensin J1-2-like [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 5.3e-33
Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          M FFSAAI LLLLLL TGM PM TEARTCESPSH F+GLCFSKNNCGHVCKTEGFHGGHC
Sbjct: 1  MNFFSAAIFLLLLLLGTGMGPMVTEARTCESPSHRFKGLCFSKNNCGHVCKTEGFHGGHC 60

Query: 61 RGFRRRCFCTKHCV 75
          RGFRRRCFCTKHCV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmaCh04G021620 vs. NCBI nr
Match: gi|659072682|ref|XP_008466730.1| (PREDICTED: defensin J1-2-like [Cucumis melo])

HSP 1 Score: 147.9 bits (372), Expect = 7.0e-33
Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          MKF SAAI LLLLLL TGM PM TEARTCESPSH F+GLCFSKNNCGHVCKTEGFHGGHC
Sbjct: 1  MKFLSAAIFLLLLLLGTGMGPMVTEARTCESPSHRFKGLCFSKNNCGHVCKTEGFHGGHC 60

Query: 61 RGFRRRCFCTKHCV 75
          RGFRRRCFCTKHCV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmaCh04G021620 vs. NCBI nr
Match: gi|449466947|ref|XP_004151187.1| (PREDICTED: defensin Ec-AMP-D2-like [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-26
Identity = 57/74 (77.03%), Postives = 63/74 (85.14%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          MKFFSA I LLLL+  +GMAPM  EAR CESPSH+F+GLCFS  NCG++CKTEGF GG C
Sbjct: 1  MKFFSAPIFLLLLIFGSGMAPMVAEARVCESPSHNFKGLCFSDTNCGNICKTEGFSGGVC 60

Query: 61 RGFRRRCFCTKHCV 75
          RGFRRRCFCTKHCV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmaCh04G021620 vs. NCBI nr
Match: gi|558067092|gb|AHA50473.1| (defensin-like protein 6 [Citrullus lanatus])

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-25
Identity = 57/74 (77.03%), Postives = 62/74 (83.78%), Query Frame = 1 

Query: 1  MKFFSAAILLLLLLLATGMAPMATEARTCESPSHHFRGLCFSKNNCGHVCKTEGFHGGHC 60
          MKFFSAAILLLLL+  TGM P+  EAR CES SH F+GLCFS  NCG++CKTEGF GG C
Sbjct: 1  MKFFSAAILLLLLIFGTGMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVC 60

Query: 61 RGFRRRCFCTKHCV 75
          RGFRRRCFCTKHCV
Sbjct: 61 RGFRRRCFCTKHCV 74

The following BLAST results are available for this feature:
BLAST of CmaCh04G021620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DEF2_CAPAN8.6e-2366.67Defensin J1-2 OS=Capsicum annuum PE=1 SV=1[more]
DEF01_ARATH4.2e-2261.64Defensin-like protein 1 OS=Arabidopsis thaliana GN=PDF2.3 PE=2 SV=1[more]
DEF02_ARATH1.2e-2158.90Defensin-like protein 2 OS=Arabidopsis thaliana GN=PDF2.2 PE=2 SV=1[more]
DEF_NELNU7.5e-1958.90Defensin-like protein OS=Nelumbo nucifera PE=3 SV=1[more]
DFSD2_HELAN7.5e-1959.46Defensin SD2 OS=Helianthus annuus GN=SD2 PE=2 SV=1[more]
BLAST of CmaCh04G021620 vs. TrEMBL
Match NameE-valueIdentityDescription
V5LEQ8_CITLA2.6e-3493.24Defensin-like protein 1 OS=Citrullus lanatus GN=PDF2.1 PE=2 SV=1[more]
A0A0A0KJ50_CUCSA3.7e-3390.54Uncharacterized protein OS=Cucumis sativus GN=Csa_5G114570 PE=3 SV=1[more]
V5LF72_CITLA7.5e-2677.03Defensin-like protein 6 OS=Citrullus lanatus GN=PDF2.6 PE=2 SV=1[more]
V5LFZ0_CITLA1.1e-2475.68Defensin-like protein 5 OS=Citrullus lanatus GN=PDF2.5 PE=2 SV=1[more]
A0A061E8D1_THECC4.6e-2370.83Defensin-like protein isoform 2 OS=Theobroma cacao GN=TCM_011133 PE=3 SV=1[more]
BLAST of CmaCh04G021620 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G02130.12.4e-2361.64 low-molecular-weight cysteine-rich 68[more]
AT2G02100.17.0e-2358.90 low-molecular-weight cysteine-rich 69[more]
AT2G02120.15.5e-2056.16 Scorpion toxin-like knottin superfamily protein[more]
AT1G61070.11.3e-1655.07 low-molecular-weight cysteine-rich 66[more]
AT5G63660.11.1e-1551.39 Scorpion toxin-like knottin superfamily protein[more]
BLAST of CmaCh04G021620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|558067078|gb|AHA50470.1|3.7e-3493.24defensin-like protein 1 [Citrullus lanatus][more]
gi|778698443|ref|XP_011654535.1|5.3e-3390.54PREDICTED: defensin J1-2-like [Cucumis sativus][more]
gi|659072682|ref|XP_008466730.1|7.0e-3390.54PREDICTED: defensin J1-2-like [Cucumis melo][more]
gi|449466947|ref|XP_004151187.1|1.3e-2677.03PREDICTED: defensin Ec-AMP-D2-like [Cucumis sativus][more]
gi|558067092|gb|AHA50473.1|1.1e-2577.03defensin-like protein 6 [Citrullus lanatus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003614Scorpion_toxin-like
IPR008176Defensin_plant
Vocabulary: Biological Process
TermDefinition
GO:0006952defense response
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0051704 multi-organism process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G021620.1CmaCh04G021620.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003614Knottin, scorpion toxin-likeGENE3DG3DSA:3.30.30.10coord: 27..73
score: 6.2
IPR003614Knottin, scorpion toxin-likeSMARTSM00505gth_4coord: 28..73
score: 1.2
IPR003614Knottin, scorpion toxin-likeunknownSSF57095Scorpion toxin-likecoord: 27..73
score: 2.96
IPR008176Defensin, plantPRINTSPR00288PUROTHIONINcoord: 58..72
score: 4.0E-9coord: 28..43
score: 4.
IPR008176Defensin, plantPROSITEPS00940GAMMA_THIONINcoord: 27..50
scor
NoneNo IPR availablePANTHERPTHR33147FAMILY NOT NAMEDcoord: 1..74
score: 1.3
NoneNo IPR availablePFAMPF00304Gamma-thionincoord: 27..73
score: 4.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G021620Cla005837Watermelon (97103) v1cmawmB710
CmaCh04G021620Csa5G114570Cucumber (Chinese Long) v2cmacuB727
CmaCh04G021620MELO3C005214Melon (DHL92) v3.5.1cmameB635
CmaCh04G021620CSPI05G02150Wild cucumber (PI 183967)cmacpiB734
CmaCh04G021620CmoCh04G022610Cucurbita moschata (Rifu)cmacmoB729
CmaCh04G021620MELO3C005214.2Melon (DHL92) v3.6.1cmamedB721
CmaCh04G021620Cla97C01G007340Watermelon (97103) v2cmawmbB705
CmaCh04G021620Bhi12G000881Wax gourdcmawgoB0828
CmaCh04G021620CsGy5G012230Cucumber (Gy14) v2cgybcmaB652
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G021620CmaCh15G008680Cucurbita maxima (Rimu)cmacmaB325
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G021620Cucurbita moschata (Rifu)cmacmoB693
CmaCh04G021620Watermelon (Charleston Gray)cmawcgB634
CmaCh04G021620Cucurbita pepo (Zucchini)cmacpeB705
CmaCh04G021620Cucurbita pepo (Zucchini)cmacpeB721
CmaCh04G021620Bottle gourd (USVL1VR-Ls)cmalsiB622
CmaCh04G021620Silver-seed gourdcarcmaB0665
CmaCh04G021620Silver-seed gourdcarcmaB1150
CmaCh04G021620Cucumber (Chinese Long) v3cmacucB0864