CSPI05G02150 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTAACCCTCTTGTACATGGCTTTAAATGTATTTTATTCCCATATTTATCCTTAAATTAGGGTTATCCTCTCCTTTAACATATATAATAAACAATTTAATTCGGTATTATAGTGAATTAAACTCATGACCCCTCTTTTTTTTTTTCTTAATATTATTTTCATGGTTTTGGAGGAATTTTAACATACACAGCTACACACCAAATGCAAAAACTTCACTCAAATGCAAATGCATCAATAAACCATAATTATTATTTTGTGTATTTAATTTGATGATCTAGCAAAGACAATGTCTATTAACACTAACTCGTCACAGATTTAAATACTTACATATGTGAAAGAAAGAAAGAGAAAAAGAAAAAGTAGGATTAATATGAGAGATATGGTGGCAGGGACGGGGCCAATGGTAACAGAGGCAAGAACATGCGAATCTCCAAGCCATCGCTTCAAGGGGCTGTGCTTCAGTAAGAACAACTGTGGCCATGTCTGCAAAACGGAGGGCTTTCACGGCGGCCATTGCCGGGGCTTCCGTCGCCGCTGCTTCTGCACAAAGCACTGTGTTTGA ATGAGAGATATGGTGGCAGGGACGGGGCCAATGGTAACAGAGGCAAGAACATGCGAATCTCCAAGCCATCGCTTCAAGGGGCTGTGCTTCAGTAAGAACAACTGTGGCCATGTCTGCAAAACGGAGGGCTTTCACGGCGGCCATTGCCGGGGCTTCCGTCGCCGCTGCTTCTGCACAAAGCACTGTGTTTGA ATGAGAGATATGGTGGCAGGGACGGGGCCAATGGTAACAGAGGCAAGAACATGCGAATCTCCAAGCCATCGCTTCAAGGGGCTGTGCTTCAGTAAGAACAACTGTGGCCATGTCTGCAAAACGGAGGGCTTTCACGGCGGCCATTGCCGGGGCTTCCGTCGCCGCTGCTTCTGCACAAAGCACTGTGTTTGA
BLAST of CSPI05G02150 vs. Swiss-Prot
Match: DEF2_CAPAN (Defensin J1-2 OS=Capsicum annuum PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 6.7e-24 Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 1
BLAST of CSPI05G02150 vs. Swiss-Prot
Match: DEF02_ARATH (Defensin-like protein 2 OS=Arabidopsis thaliana GN=PDF2.2 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 2.6e-20 Identity = 40/59 (67.80%), Postives = 46/59 (77.97%), Query Frame = 1
BLAST of CSPI05G02150 vs. Swiss-Prot
Match: DEF01_ARATH (Defensin-like protein 1 OS=Arabidopsis thaliana GN=PDF2.3 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 1.3e-19 Identity = 39/59 (66.10%), Postives = 45/59 (76.27%), Query Frame = 1
BLAST of CSPI05G02150 vs. Swiss-Prot
Match: DFSD2_HELAN (Defensin SD2 OS=Helianthus annuus GN=SD2 PE=2 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.4e-18 Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = 1
BLAST of CSPI05G02150 vs. Swiss-Prot
Match: DEF04_ARATH (Defensin-like protein 4 OS=Arabidopsis thaliana GN=PDF2.1 PE=2 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 2.7e-17 Identity = 37/59 (62.71%), Postives = 42/59 (71.19%), Query Frame = 1
BLAST of CSPI05G02150 vs. TrEMBL
Match: A0A0A0KJ50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G114570 PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 6.3e-29 Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 1
BLAST of CSPI05G02150 vs. TrEMBL
Match: V5LEQ8_CITLA (Defensin-like protein 1 OS=Citrullus lanatus GN=PDF2.1 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 2.0e-27 Identity = 53/60 (88.33%), Postives = 55/60 (91.67%), Query Frame = 1
BLAST of CSPI05G02150 vs. TrEMBL
Match: A0A0C4FSU3_TOBAC (DEF2 protein OS=Nicotiana tabacum GN=DEF2 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 3.3e-22 Identity = 46/54 (85.19%), Postives = 49/54 (90.74%), Query Frame = 1
BLAST of CSPI05G02150 vs. TrEMBL
Match: V5LF08_CITLA (Defensin-like protein 4 OS=Citrullus lanatus GN=PDF2.4 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 2.8e-21 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = 1
BLAST of CSPI05G02150 vs. TrEMBL
Match: A0A0V0GKJ2_SOLCH (Putative defensin J1-2-like OS=Solanum chacoense PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.4e-20 Identity = 46/62 (74.19%), Postives = 51/62 (82.26%), Query Frame = 1
BLAST of CSPI05G02150 vs. TAIR10
Match: AT2G02100.1 (AT2G02100.1 low-molecular-weight cysteine-rich 69) HSP 1 Score: 98.6 bits (244), Expect = 1.5e-21 Identity = 40/59 (67.80%), Postives = 46/59 (77.97%), Query Frame = 1
BLAST of CSPI05G02150 vs. TAIR10
Match: AT2G02130.1 (AT2G02130.1 low-molecular-weight cysteine-rich 68) HSP 1 Score: 96.3 bits (238), Expect = 7.4e-21 Identity = 39/59 (66.10%), Postives = 45/59 (76.27%), Query Frame = 1
BLAST of CSPI05G02150 vs. TAIR10
Match: AT2G02120.1 (AT2G02120.1 Scorpion toxin-like knottin superfamily protein) HSP 1 Score: 88.6 bits (218), Expect = 1.5e-18 Identity = 37/59 (62.71%), Postives = 42/59 (71.19%), Query Frame = 1
BLAST of CSPI05G02150 vs. TAIR10
Match: AT5G63660.1 (AT5G63660.1 Scorpion toxin-like knottin superfamily protein) HSP 1 Score: 74.3 bits (181), Expect = 3.0e-14 Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 1
BLAST of CSPI05G02150 vs. TAIR10
Match: AT2G02140.1 (AT2G02140.1 low-molecular-weight cysteine-rich 72) HSP 1 Score: 65.9 bits (159), Expect = 1.1e-11 Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 1
BLAST of CSPI05G02150 vs. NCBI nr
Match: gi|778698443|ref|XP_011654535.1| (PREDICTED: defensin J1-2-like [Cucumis sativus]) HSP 1 Score: 134.0 bits (336), Expect = 9.0e-29 Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 1
BLAST of CSPI05G02150 vs. NCBI nr
Match: gi|659072682|ref|XP_008466730.1| (PREDICTED: defensin J1-2-like [Cucumis melo]) HSP 1 Score: 134.0 bits (336), Expect = 9.0e-29 Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 1
BLAST of CSPI05G02150 vs. NCBI nr
Match: gi|558067078|gb|AHA50470.1| (defensin-like protein 1 [Citrullus lanatus]) HSP 1 Score: 129.0 bits (323), Expect = 2.9e-27 Identity = 53/60 (88.33%), Postives = 55/60 (91.67%), Query Frame = 1
BLAST of CSPI05G02150 vs. NCBI nr
Match: gi|392621850|gb|AFM82500.1| (defensin [Nicotiana tabacum]) HSP 1 Score: 111.7 bits (278), Expect = 4.8e-22 Identity = 46/54 (85.19%), Postives = 49/54 (90.74%), Query Frame = 1
BLAST of CSPI05G02150 vs. NCBI nr
Match: gi|697112663|ref|XP_009610211.1| (PREDICTED: defensin J1-2 [Nicotiana tomentosiformis]) HSP 1 Score: 111.7 bits (278), Expect = 4.8e-22 Identity = 46/54 (85.19%), Postives = 49/54 (90.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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