CmaCh04G020020 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G020020
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUbiquitin, putative
LocationCma_Chr04 : 12267435 .. 12268405 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAATTATTGTGGTTCCGTTGAGGTAGTATATGCTACCTCTTCTAGTTCCTTTAATTGCCACTAAAGCTCCACGAGCTACTTTCAAATTCCCTCCTTAAAAAATGATACGATAACCACTCGCATCCAAAATGCCAAGGGAAATCAATTTTTTCTTCAAGTCAGGGACATACCTCACCTCATTGAGTTTTCGTATAACCCCGTCAAACATCTTGATTTATACTGAGCTGATTTCTGTCATCTTGCAAGTACTATCATTGCCCATATAAGCAACTCCACCATATCCCAATCCCCAAACAAACCCTAATCTTCAATGGTCACGTCCTCCAAGACGACGGCGACGTCGAATTCTGCGAAATCCTCCAGCATTCTCGCATTCAACTCCTCGTAACTTCTGAATCCCAAAACAATTCCCAATCCCAATCGCAGCCCCAAATCAACCTGAACCATTCAATTGGGCGCCTCAAACAGAGGATCCACGAAATCAACTCTGTGGGCCCCATCAACGGGATCATGCTCCAACCCAACGTTTCCCCTGCCGACTTTCAGGATCAACGTTCCTTGCGTGACAGCGAGATGTCGGAGAATTTCGAGGTTGAGGTTTGTTTGTGGCCGTCGCCTACGGTTTCGACATCTGCGCCCAAGATGACAATGTCGTCGCCGTCGCCGACGACAACGACGACGGCGGCTGTAATGGTGGCAACGAGTGGGTCATCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTTGGAACTCAAAGATACCAATGGAAGTGAACCCAACGAATAACGTGGGGGAATTGAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTGCATTTTCATCCGCCACCAGAGGGTTTCTTTTTCATTTATGACCACGACGACCGCTCCTTCCGTTGGCATGGTGTAGCCCACGACGATACCATTGAGATCTTCAATGACAGCGTTTCTGGCGGATCTTAA

mRNA sequence

ATGCCCAATTATTGTGGTTCCGTTGAGTACTATCATTGCCCATATAAGCAACTCCACCATATCCCAATCCCCAAACAAACCCTAATCTTCAATGGTCACGTCCTCCAAGACGACGGCGACGTCGAATTCTGCGAAATCCTCCAGCATTCTCGCATTCAACTCCTCGTAACTTCTGAATCCCAAAACAATTCCCAATCCCAATCGCAGCCCCAAATCAACCTGAACCATTCAATTGGGCGCCTCAAACAGAGGATCCACGAAATCAACTCTGTGGGCCCCATCAACGGGATCATGCTCCAACCCAACGTTTCCCCTGCCGACTTTCAGGATCAACGTTCCTTGCGTGACAGCGAGATGTCGGAGAATTTCGAGGTTGAGGTTTGTTTGTGGCCGTCGCCTACGGTTTCGACATCTGCGCCCAAGATGACAATGTCGTCGCCGTCGCCGACGACAACGACGACGGCGGCTGTAATGGTGGCAACGAGTGGGTCATCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTTGGAACTCAAAGATACCAATGGAAGTGAACCCAACGAATAACGTGGGGGAATTGAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTGCATTTTCATCCGCCACCAGAGGGTTTCTTTTTCATTTATGACCACGACGACCGCTCCTTCCGTTGGCATGGTGTAGCCCACGACGATACCATTGAGATCTTCAATGACAGCGTTTCTGGCGGATCTTAA

Coding sequence (CDS)

ATGCCCAATTATTGTGGTTCCGTTGAGTACTATCATTGCCCATATAAGCAACTCCACCATATCCCAATCCCCAAACAAACCCTAATCTTCAATGGTCACGTCCTCCAAGACGACGGCGACGTCGAATTCTGCGAAATCCTCCAGCATTCTCGCATTCAACTCCTCGTAACTTCTGAATCCCAAAACAATTCCCAATCCCAATCGCAGCCCCAAATCAACCTGAACCATTCAATTGGGCGCCTCAAACAGAGGATCCACGAAATCAACTCTGTGGGCCCCATCAACGGGATCATGCTCCAACCCAACGTTTCCCCTGCCGACTTTCAGGATCAACGTTCCTTGCGTGACAGCGAGATGTCGGAGAATTTCGAGGTTGAGGTTTGTTTGTGGCCGTCGCCTACGGTTTCGACATCTGCGCCCAAGATGACAATGTCGTCGCCGTCGCCGACGACAACGACGACGGCGGCTGTAATGGTGGCAACGAGTGGGTCATCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTTGGAACTCAAAGATACCAATGGAAGTGAACCCAACGAATAACGTGGGGGAATTGAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTGCATTTTCATCCGCCACCAGAGGGTTTCTTTTTCATTTATGACCACGACGACCGCTCCTTCCGTTGGCATGGTGTAGCCCACGACGATACCATTGAGATCTTCAATGACAGCGTTTCTGGCGGATCTTAA

Protein sequence

MPNYCGSVEYYHCPYKQLHHIPIPKQTLIFNGHVLQDDGDVEFCEILQHSRIQLLVTSESQNNSQSQSQPQINLNHSIGRLKQRIHEINSVGPINGIMLQPNVSPADFQDQRSLRDSEMSENFEVEVCLWPSPTVSTSAPKMTMSSPSPTTTTTAAVMVATSGSSKNKLKVMVQPKFWNSKIPMEVNPTNNVGELKKELQKLQQRLHFHPPPEGFFFIYDHDDRSFRWHGVAHDDTIEIFNDSVSGGS
Homology
[Close]
BLAST of CmaCh04G020020 vs. TrEMBL
Match: V4U8Q0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018056mg PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.0e-46
Identity = 119/258 (46.12%), Postives = 159/258 (61.63%), Query Frame = 1 

Query: 21  IPIPKQTLIFNGHVLQDDGDVEFCEILQHSRIQLLVTSESQNNSQS-QSQPQ-------- 80
           IP+PKQTL+FNG VLQDD DVE CEILQ+SRIQLLV S+++   ++ QS P         
Sbjct: 36  IPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKIN 95

Query: 81  -----------------INLNHSIGRLKQRIHEINSVGPINGIMLQPNVSPADFQDQRSL 140
                            +++N ++ RLK++IHE+ S+ P+N +++Q   S A+ QD RSL
Sbjct: 96  IPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESI-PVNRLLVQS--SGAELQDHRSL 155

Query: 141 RDSEMSENFEVEVCLWPSPTVSTSAPKMTMSSPSPTTTTTAAVMVATSGSSKNKLKVMVQ 200
           RD E+ +N E++V + PSPT               T+TT+       SG    KLK++V 
Sbjct: 156 RDCELMDNAEIDVHVRPSPTA--------------TSTTS-------SGMGSRKLKLLVL 215

Query: 201 PKFWNSKIPMEVNPTNNVGELKKELQKLQQRLHFHPPPEGFFFIYDH----DDRSFRWHG 249
            +  N +IP+EVN ++NV EL+KELQKL QR HFH P +G+FFIY      DDRSFRWH 
Sbjct: 216 TQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHH 269

[Close]
BLAST of CmaCh04G020020 vs. TrEMBL
Match: A0A067G7E3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044874mg PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.6e-46
Identity = 119/258 (46.12%), Postives = 159/258 (61.63%), Query Frame = 1 

Query: 21  IPIPKQTLIFNGHVLQDDGDVEFCEILQHSRIQLLVTSESQNNSQS-QSQPQ-------- 80
           IP+PKQTL+FNG VLQDD DVE CEILQ+SRIQLLV S+++   ++ QS P         
Sbjct: 36  IPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKIN 95

Query: 81  -----------------INLNHSIGRLKQRIHEINSVGPINGIMLQPNVSPADFQDQRSL 140
                            +++N ++ RLK++IHE+ S+ P+N +++Q   S A+ QD RSL
Sbjct: 96  IPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESI-PVNRLLVQS--SGAELQDHRSL 155

Query: 141 RDSEMSENFEVEVCLWPSPTVSTSAPKMTMSSPSPTTTTTAAVMVATSGSSKNKLKVMVQ 200
           RD E+ +N E++V + PSPT               T+TT+       SG    KLK++V 
Sbjct: 156 RDCELMDNAEIDVHVRPSPTA--------------TSTTS-------SGMGPRKLKLLVL 215

Query: 201 PKFWNSKIPMEVNPTNNVGELKKELQKLQQRLHFHPPPEGFFFIYDH----DDRSFRWHG 249
            +  N +IP+EVN ++NV EL+KELQKL QR HFH P +G+FFIY      DDRSFRWH 
Sbjct: 216 TQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHH 269

[Close]
BLAST of CmaCh04G020020 vs. TrEMBL
Match: M5WRM5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022934mg PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.9e-45
Identity = 117/262 (44.66%), Postives = 156/262 (59.54%), Query Frame = 1 

Query: 21  IPIPKQTLIFNGHVLQDDGDVEFCEILQHSRIQLLVTSESQ--------NNSQSQSQP-- 80
           I +P QTL+FNG VL+DD DV +CEIL +S IQL+V SES+        NN + +  P  
Sbjct: 36  ISVPHQTLVFNGQVLEDDKDVAYCEILNNSHIQLIVASESEKPTTTNNNNNVKVEDSPAP 95

Query: 81  -------------------QINLNHSIGRLKQRIHEINSVGPINGIMLQPNVSPADFQDQ 140
                              ++++N ++ +LK++I  ++   PI  ++L    +  + QD 
Sbjct: 96  SKKIQLNVKTPTSKMHVPVEMDINDTVTKLKEKIQAMDQAVPIGRLVLHSLGN--ELQDH 155

Query: 141 RSLRDSEMSENFEVEVCLWPSPTVSTS-APKMTMSSPSPTTTTTAAVMVATSGSSKNKLK 200
           RSLRD E+S+N E+EV L PSPT + + A  + M  P         V V     S+NKLK
Sbjct: 156 RSLRDCELSDNAEIEVSLRPSPTAAAAVASPLAMGGPG-----AGGVAV-----SRNKLK 215

Query: 201 VMVQPKFWNSKIPMEVNPTNNVGELKKELQKLQQRLHFHPPPEGFFFIYD----HDDRSF 249
           +MV PK    KIP+E+NP++NVGEL+KELQKL  RLHFH P E +FFIY      DDRSF
Sbjct: 216 LMVLPKCGTKKIPVEMNPSDNVGELRKELQKLHHRLHFHLPQESYFFIYKQNVMEDDRSF 275

[Close]
BLAST of CmaCh04G020020 vs. TrEMBL
Match: B9RXR6_RICCO (Ubiquitin, putative OS=Ricinus communis GN=RCOM_0905760 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.1e-43
Identity = 118/256 (46.09%), Postives = 153/256 (59.77%), Query Frame = 1 

Query: 21  IPIPKQTLIFNGHVLQDDGDVEFCEILQHSRIQLLVTSES-----QNNSQSQSQP----- 80
           IPI KQTL+FNG VLQD+ D+E+CEIL +S IQLL+  ++     Q  ++  S P     
Sbjct: 36  IPINKQTLVFNGQVLQDERDIEYCEILHNSHIQLLIAPDNDETKPQIKTEESSPPSKKIQ 95

Query: 81  --------------QINLNHSIGRLKQRIHEINSVGPINGIMLQPNVSPADFQDQRSLRD 140
                         ++++N +I RLK++IHEI SV P++ ++LQ   S  +  D RSLR+
Sbjct: 96  LSIKIPSSKLHVPIEMDVNDTILRLKEKIHEIESV-PVSRLVLQS--SNGELLDNRSLRE 155

Query: 141 SEMSENFEVEVCLWPSPTVSTSAPKMTMSSPSPTTTTTAAVMVATSGSSKNKLKVMVQPK 200
           SE+ +N E+ V + PSPT       +   S  PT  T              KLK+MV  K
Sbjct: 156 SELLDNSEISVNIRPSPT------GLGTGSGGPTAGT-------------KKLKLMVLTK 215

Query: 201 FWNSKIPMEVNPTNNVGELKKELQKLQQRLHFHPPPEGFFFIYDH----DDRSFRWHGVA 249
               KIP+EVN ++NVGEL+KELQKL QRLHFH P EG+FFIY      DDRSFRWH V 
Sbjct: 216 CGTQKIPVEVNASDNVGELRKELQKLHQRLHFHLPQEGYFFIYKQNVMDDDRSFRWHHVC 269

[Close]
BLAST of CmaCh04G020020 vs. TrEMBL
Match: A0A061GGR6_THECC (Ubiquitin, putative OS=Theobroma cacao GN=TCM_030159 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.5e-43
Identity = 118/254 (46.46%), Postives = 153/254 (60.24%), Query Frame = 1 

Query: 21  IPIPKQTLIFNGHVLQDDGDVEFCEILQHSRIQLLVTSESQN------------------ 80
           IPI +QTL+FNG VLQD+ DVE+CEILQ+S IQLLV  E+                    
Sbjct: 36  IPISRQTLVFNGQVLQDERDVEYCEILQNSSIQLLVAPEADKPQVVKTEKSSPSKKLQLK 95

Query: 81  ----NSQSQSQPQINLNHSIGRLKQRIHEINSVGPINGIMLQPNVSPADFQDQRSLRDSE 140
               +S++    ++++N ++ RLK++I E+  V P+N +++Q   S A+ QD  SLRD E
Sbjct: 96  INIPSSKASIPLEMDVNDTVLRLKEKIREMEPV-PVNRLVVQS--SGAELQDHLSLRDCE 155

Query: 141 MSENFEVEVCLWPSPTVSTSAPKMTMSSPSPTTTTTAAVMVATSGSSKNKLKVMVQPKFW 200
           + +N E++V + PSPT S +       S   TT T            K  LKVMV PK  
Sbjct: 156 LPDNTEIDVNIKPSPTGSGTG------SAGATTGT------------KRLLKVMVLPKCG 215

Query: 201 NSKIPMEVNPTNNVGELKKELQKLQQRLHFHPPPEGFFFIYDH----DDRSFRWHGVAHD 249
             KIP+EVN ++NV EL+KELQKLQQRL FH P EG+FFIY      DDRSFRWH V   
Sbjct: 216 TKKIPVEVNASDNVAELRKELQKLQQRLQFHLPQEGYFFIYKQNVMDDDRSFRWHHVGQG 268

[Close]
BLAST of CmaCh04G020020 vs. TAIR10
Match: AT4G05230.1 (AT4G05230.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 91.3 bits (225), Expect = 9.2e-19
Identity = 73/206 (35.44%), Postives = 113/206 (54.85%), Query Frame = 1 

Query: 64  SQSQSQPQINLNH--SIGRLKQRIHEINSVGPING--IMLQPNVSPADFQDQRSLRDSEM 123
           ++S S  +I L +  ++  +KQ+I +   + P++   ++ Q NV     QD   +    +
Sbjct: 7   TRSGSTFEIELGYWDTVLEIKQKIEKYQRI-PVSKQTLLFQGNV----LQDHLDIEQCVI 66

Query: 124 SENFEVEVCLWPSPTVSTSAPKMTMSSPSPTTTTT---------AAVMVATSGSSKN--- 183
             +  +++ +  SP  S +  ++  +   P + +T         + VM+  S ++ N   
Sbjct: 67  LNHSRIQLSI-SSPDQSRNNIQVFKTEQFPQSNSTEQTSNGHHESTVMIPMSNNNNNNNP 126

Query: 184 -KLKVMVQPKFWNSKIPMEVNPTNNVGELKKELQKLQQRLHFHPPPEGFFFIYDH----D 243
            KL+VMV PK    KIP++VN  +NVGEL+KEL K+QQR     P EG+FFIY      +
Sbjct: 127 KKLRVMVLPKSGTRKIPVDVNAGDNVGELRKELAKIQQRFQLSLPQEGYFFIYKQNVMDE 186

Query: 244 DRSFRWHGVAHDDTIEIFNDSVSGGS 249
           +RSFRWH V   DTIEIFN SVSGGS
Sbjct: 187 NRSFRWHRVDQGDTIEIFNGSVSGGS 206

[Close]
BLAST of CmaCh04G020020 vs. TAIR10
Match: AT4G03370.1 (AT4G03370.1 Ubiquitin family protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-10
Identity = 39/82 (47.56%), Postives = 51/82 (62.20%), Query Frame = 1 

Query: 168 KLKVMVQPKFWNSKIPMEVNPTNNVGELKKELQKLQQRLHFHPPPEGFFFIYDHD----D 227
           K+ VMVQP     +I +EVN  +NV  L+KEL K+Q+R   + P EGFFFI+  D    D
Sbjct: 199 KITVMVQPFEETRRIQVEVNVLSNVEVLRKELVKMQERGELNLPHEGFFFIHKQDVLRED 258

Query: 228 RSFRWHGVAHDDTIEIFNDSVS 246
           +SF  + VA  DTIEIF   V+
Sbjct: 259 QSFMANRVAPGDTIEIFQGYVT 280

[Close]
BLAST of CmaCh04G020020 vs. TAIR10
Match: AT4G05260.1 (AT4G05260.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 49.7 bits (117), Expect = 3.1e-06
Identity = 65/244 (26.64%), Postives = 105/244 (43.03%), Query Frame = 1 

Query: 16  KQLHHIPIPKQTLIFNGHVLQDDGDVEFCEILQHSRIQLLVTSESQNNS----QSQSQPQ 75
           ++   IP+P QTL F G+ L+D  D+  C+ILQ+S + L V  +  +N+    Q++ QP 
Sbjct: 31  EKYQRIPVPNQTLFF-GNALEDHLDIGQCKILQNSHVVLFVLPDPNDNNDQVLQTEEQPP 90

Query: 76  INLNHSIGR-LKQRIHEINSVGPINGIMLQP-----NVSPADFQDQ--RSLRDSEMSENF 135
           I  +   G  L      + ++ P   +   P        P+D      +  +DS +  N 
Sbjct: 91  IIGDLIYGEDLPLTTEVVLNIRPFCPVQDSPVRNNDQSPPSDAAKDIIKGHQDSPVRNNE 150

Query: 136 EVEVCLWPSPTVSTSAPKMTMSSPSPTTTTTAAVMVATSGSSKNKLKVMVQPKFWNSKIP 195
           +        P+ S         SP      T  VM  +      K+K      F   K  
Sbjct: 151 QTP------PSDSVKENTNIQDSPVGKIILTLRVMPYSG-----KIKAAKNLHFITYK-- 210

Query: 196 MEVNPTNNVGELKKELQKLQQRLHFHPPPEG-FFFIYD----HDDRSFRWHGVAHDDTIE 243
                T  V  L++EL + + R H   P +G +FF++     ++D+SF W+ VAH D +E
Sbjct: 211 -----TYRVKMLRQELVQNELRDHLDRPQDGDYFFVHKGRVLNEDQSFEWNSVAHTDIVE 255

[Close]
BLAST of CmaCh04G020020 vs. TAIR10
Match: AT4G05250.1 (AT4G05250.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 48.1 bits (113), Expect = 8.9e-06
Identity = 28/61 (45.90%), Postives = 36/61 (59.02%), Query Frame = 1 

Query: 8  VEYYHCPYKQLHHIPIPKQTLIFNGHVLQDDGDVEFCEILQHSRIQLLV---TSESQNNS 66
          +E Y C       IP+ KQTLIF G VLQD  D++ C IL HS IQ+ V    + + NN+
Sbjct: 30 IEKYQC-------IPVSKQTLIFQGVVLQDHLDIKQCVILNHSHIQIFVEPNPNPNPNNA 83

[Close]
BLAST of CmaCh04G020020 vs. NCBI nr
Match: gi|567913557|ref|XP_006449092.1| (hypothetical protein CICLE_v10018056mg [Citrus clementina])

HSP 1 Score: 194.1 bits (492), Expect = 2.8e-46
Identity = 119/258 (46.12%), Postives = 159/258 (61.63%), Query Frame = 1 

Query: 21  IPIPKQTLIFNGHVLQDDGDVEFCEILQHSRIQLLVTSESQNNSQS-QSQPQ-------- 80
           IP+PKQTL+FNG VLQDD DVE CEILQ+SRIQLLV S+++   ++ QS P         
Sbjct: 36  IPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKIN 95

Query: 81  -----------------INLNHSIGRLKQRIHEINSVGPINGIMLQPNVSPADFQDQRSL 140
                            +++N ++ RLK++IHE+ S+ P+N +++Q   S A+ QD RSL
Sbjct: 96  IPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESI-PVNRLLVQS--SGAELQDHRSL 155

Query: 141 RDSEMSENFEVEVCLWPSPTVSTSAPKMTMSSPSPTTTTTAAVMVATSGSSKNKLKVMVQ 200
           RD E+ +N E++V + PSPT               T+TT+       SG    KLK++V 
Sbjct: 156 RDCELMDNAEIDVHVRPSPTA--------------TSTTS-------SGMGSRKLKLLVL 215

Query: 201 PKFWNSKIPMEVNPTNNVGELKKELQKLQQRLHFHPPPEGFFFIYDH----DDRSFRWHG 249
            +  N +IP+EVN ++NV EL+KELQKL QR HFH P +G+FFIY      DDRSFRWH 
Sbjct: 216 TQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHH 269

[Close]
BLAST of CmaCh04G020020 vs. NCBI nr
Match: gi|568827267|ref|XP_006467986.1| (PREDICTED: polyubiquitin 9 [Citrus sinensis])

HSP 1 Score: 193.7 bits (491), Expect = 3.7e-46
Identity = 119/258 (46.12%), Postives = 159/258 (61.63%), Query Frame = 1 

Query: 21  IPIPKQTLIFNGHVLQDDGDVEFCEILQHSRIQLLVTSESQNNSQS-QSQPQ-------- 80
           IP+PKQTL+FNG VLQDD DVE CEILQ+SRIQLLV S+++   ++ QS P         
Sbjct: 36  IPVPKQTLVFNGQVLQDDRDVEHCEILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKIN 95

Query: 81  -----------------INLNHSIGRLKQRIHEINSVGPINGIMLQPNVSPADFQDQRSL 140
                            +++N ++ RLK++IHE+ S+ P+N +++Q   S A+ QD RSL
Sbjct: 96  IPSNSKTHHHHHHLPLDMDVNDTVLRLKEKIHEMESI-PVNRLLVQS--SGAELQDHRSL 155

Query: 141 RDSEMSENFEVEVCLWPSPTVSTSAPKMTMSSPSPTTTTTAAVMVATSGSSKNKLKVMVQ 200
           RD E+ +N E++V + PSPT               T+TT+       SG    KLK++V 
Sbjct: 156 RDCELMDNAEIDVHVRPSPTA--------------TSTTS-------SGMGPRKLKLLVL 215

Query: 201 PKFWNSKIPMEVNPTNNVGELKKELQKLQQRLHFHPPPEGFFFIYDH----DDRSFRWHG 249
            +  N +IP+EVN ++NV EL+KELQKL QR HFH P +G+FFIY      DDRSFRWH 
Sbjct: 216 TQCGNKRIPVEVNASDNVSELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHH 269

[Close]
BLAST of CmaCh04G020020 vs. NCBI nr
Match: gi|595914316|ref|XP_007214682.1| (hypothetical protein PRUPE_ppa022934mg [Prunus persica])

HSP 1 Score: 189.5 bits (480), Expect = 7.0e-45
Identity = 117/262 (44.66%), Postives = 156/262 (59.54%), Query Frame = 1 

Query: 21  IPIPKQTLIFNGHVLQDDGDVEFCEILQHSRIQLLVTSESQ--------NNSQSQSQP-- 80
           I +P QTL+FNG VL+DD DV +CEIL +S IQL+V SES+        NN + +  P  
Sbjct: 36  ISVPHQTLVFNGQVLEDDKDVAYCEILNNSHIQLIVASESEKPTTTNNNNNVKVEDSPAP 95

Query: 81  -------------------QINLNHSIGRLKQRIHEINSVGPINGIMLQPNVSPADFQDQ 140
                              ++++N ++ +LK++I  ++   PI  ++L    +  + QD 
Sbjct: 96  SKKIQLNVKTPTSKMHVPVEMDINDTVTKLKEKIQAMDQAVPIGRLVLHSLGN--ELQDH 155

Query: 141 RSLRDSEMSENFEVEVCLWPSPTVSTS-APKMTMSSPSPTTTTTAAVMVATSGSSKNKLK 200
           RSLRD E+S+N E+EV L PSPT + + A  + M  P         V V     S+NKLK
Sbjct: 156 RSLRDCELSDNAEIEVSLRPSPTAAAAVASPLAMGGPG-----AGGVAV-----SRNKLK 215

Query: 201 VMVQPKFWNSKIPMEVNPTNNVGELKKELQKLQQRLHFHPPPEGFFFIYD----HDDRSF 249
           +MV PK    KIP+E+NP++NVGEL+KELQKL  RLHFH P E +FFIY      DDRSF
Sbjct: 216 LMVLPKCGTKKIPVEMNPSDNVGELRKELQKLHHRLHFHLPQESYFFIYKQNVMEDDRSF 275

[Close]
BLAST of CmaCh04G020020 vs. NCBI nr
Match: gi|255554995|ref|XP_002518535.1| (PREDICTED: uncharacterized protein LOC8267377 [Ricinus communis])

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43
Identity = 118/256 (46.09%), Postives = 153/256 (59.77%), Query Frame = 1 

Query: 21  IPIPKQTLIFNGHVLQDDGDVEFCEILQHSRIQLLVTSES-----QNNSQSQSQP----- 80
           IPI KQTL+FNG VLQD+ D+E+CEIL +S IQLL+  ++     Q  ++  S P     
Sbjct: 36  IPINKQTLVFNGQVLQDERDIEYCEILHNSHIQLLIAPDNDETKPQIKTEESSPPSKKIQ 95

Query: 81  --------------QINLNHSIGRLKQRIHEINSVGPINGIMLQPNVSPADFQDQRSLRD 140
                         ++++N +I RLK++IHEI SV P++ ++LQ   S  +  D RSLR+
Sbjct: 96  LSIKIPSSKLHVPIEMDVNDTILRLKEKIHEIESV-PVSRLVLQS--SNGELLDNRSLRE 155

Query: 141 SEMSENFEVEVCLWPSPTVSTSAPKMTMSSPSPTTTTTAAVMVATSGSSKNKLKVMVQPK 200
           SE+ +N E+ V + PSPT       +   S  PT  T              KLK+MV  K
Sbjct: 156 SELLDNSEISVNIRPSPT------GLGTGSGGPTAGT-------------KKLKLMVLTK 215

Query: 201 FWNSKIPMEVNPTNNVGELKKELQKLQQRLHFHPPPEGFFFIYDH----DDRSFRWHGVA 249
               KIP+EVN ++NVGEL+KELQKL QRLHFH P EG+FFIY      DDRSFRWH V 
Sbjct: 216 CGTQKIPVEVNASDNVGELRKELQKLHQRLHFHLPQEGYFFIYKQNVMDDDRSFRWHHVC 269

[Close]
BLAST of CmaCh04G020020 vs. NCBI nr
Match: gi|802779511|ref|XP_012091408.1| (PREDICTED: ubiquitin-like protein-NEDD8-like protein RUB3 [Jatropha curcas])

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43
Identity = 119/253 (47.04%), Postives = 155/253 (61.26%), Query Frame = 1 

Query: 21  IPIPKQTLIFNGHVLQDDGDVEFCEILQHSRIQLLVTSESQNNS--QSQSQP-------- 80
           IP+ KQTLIFNG VLQDD DVE CEILQ+S IQLL+  ++        +S P        
Sbjct: 36  IPVNKQTLIFNGQVLQDDRDVEHCEILQNSHIQLLIAPDNDKPQIKVEESSPSKKIQLSI 95

Query: 81  -----------QINLNHSIGRLKQRIHEINSVGPINGIMLQPNVSPADFQDQRSLRDSEM 140
                      +++LN ++ RLK++I E+ SV PI+ ++LQ N    + QD RSL + E+
Sbjct: 96  KIPSSKLHVPLEMDLNDTVLRLKEKIQEMESV-PIHRLILQSN--GGELQDNRSLHECEL 155

Query: 141 SENFEVEVCLWPSPTVSTSAPKMTMSSPSPTTTTTAAVMVATSGSSKNKLKVMVQPKFWN 200
            EN E+ V + PSPT S             T +T AA   AT+  +KNKLK+MV  K   
Sbjct: 156 MENSEINVNIRPSPTCSG------------TGSTGAA---ATTTGTKNKLKLMVLTKCGT 215

Query: 201 SKIPMEVNPTNNVGELKKELQKLQQRLHFHPPPEGFFFIYDH----DDRSFRWHGVAHDD 249
            KIP+E+N ++NVGEL+KELQKL Q+L FH P EG+FFIY      +D+SFRWH V   D
Sbjct: 216 KKIPVEMNASDNVGELRKELQKLHQKLQFHLPQEGYFFIYKQNVMDEDQSFRWHHVCQGD 270

The following BLAST results are available for this feature:
BLAST of CmaCh04G020020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh04G020020 vs. TrEMBL
Match NameE-valueIdentityDescription
V4U8Q0_9ROSI2.0e-4646.12Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018056mg PE=4 SV=1[more]
A0A067G7E3_CITSI2.6e-4646.12Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044874mg PE=4 SV=1[more]
M5WRM5_PRUPE4.9e-4544.66Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022934mg PE=4 SV=1[more]
B9RXR6_RICCO2.1e-4346.09Ubiquitin, putative OS=Ricinus communis GN=RCOM_0905760 PE=4 SV=1[more]
A0A061GGR6_THECC3.5e-4346.46Ubiquitin, putative OS=Theobroma cacao GN=TCM_030159 PE=4 SV=1[more]
BLAST of CmaCh04G020020 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G05230.19.2e-1935.44 Ubiquitin-like superfamily protein[more]
AT4G03370.12.0e-1047.56 Ubiquitin family protein[more]
AT4G05260.13.1e-0626.64 Ubiquitin-like superfamily protein[more]
AT4G05250.18.9e-0645.90 Ubiquitin-like superfamily protein[more]
BLAST of CmaCh04G020020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|567913557|ref|XP_006449092.1|2.8e-4646.12hypothetical protein CICLE_v10018056mg [Citrus clementina][more]
gi|568827267|ref|XP_006467986.1|3.7e-4646.12PREDICTED: polyubiquitin 9 [Citrus sinensis][more]
gi|595914316|ref|XP_007214682.1|7.0e-4544.66hypothetical protein PRUPE_ppa022934mg [Prunus persica][more]
gi|255554995|ref|XP_002518535.1|2.9e-4346.09PREDICTED: uncharacterized protein LOC8267377 [Ricinus communis][more]
gi|802779511|ref|XP_012091408.1|2.9e-4347.04PREDICTED: ubiquitin-like protein-NEDD8-like protein RUB3 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G020020.1CmaCh04G020020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 18..57
score: 1.
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 17..61
score: 9.0E-5coord: 161..239
score: 1.
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 21..132
score: 1.8E-37coord: 168..244
score: 1.8
NoneNo IPR availablePANTHERPTHR10666:SF159SUBFAMILY NOT NAMEDcoord: 168..244
score: 1.8E-37coord: 21..132
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G020020CmoCh04G021270Cucurbita moschata (Rifu)cmacmoB729
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G020020Cucumber (Gy14) v2cgybcmaB657
CmaCh04G020020Melon (DHL92) v3.6.1cmamedB747
CmaCh04G020020Watermelon (97103) v2cmawmbB768
CmaCh04G020020Wax gourdcmawgoB0908
CmaCh04G020020Cucurbita maxima (Rimu)cmacmaB018
CmaCh04G020020Cucurbita moschata (Rifu)cmacmoB679
CmaCh04G020020Cucurbita pepo (Zucchini)cmacpeB721
CmaCh04G020020Bottle gourd (USVL1VR-Ls)cmalsiB683