CmaCh04G014740 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G014740
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	ATP synthase subunit beta
Location	Cma_Chr04 : 7505760 .. 7506375 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAAAATATTTGTTGAAAAAGAGCAATTGTGCTTTATCTTTGTTAGGCCGATAGCAAATGTGCCCTTGTCTGTGGTCAAATGAATTAGCCCCCAGGTGCTCGTGCTCGTGTTGGTCTTACTGGACTAACTGTGGCTGAGCACTTCCGTAATGCTGAAGGGCAATGCTTCTCTTCATCGTCAACATTTTTCCGTTTTACCCAGGTAAGCTTGTGCTCCGAGGTTCGTATTGATGCTCTGTTTTGTTAAGATCTTACTGTGTCAATGTCAAGTTGAGAATCATATTAACGGCTTGTCTTATTTCAAATTATCCTTTTTCTTCTGTCTCACAGGCTAACTCAGAAGTGTCTGCTTTGCTTGGTCGTATCCCATCTGCCGTCGGTTACCAACCAACCTTGGCTACTGATCTTGGAGGCCTTCAAGAGCGTACCACAACCACAAAGAAAGGTTCTATCACTTCAGTTCAAGCTATCTACGTGCCTGCTGATGACTTGACTGACCCCTGCTCCTGCTACCACTTTTGCTCACTTGGATGCCACAACTATGTTGTCACGACAGGTGCAATCAGGTTTAATTCTGAGATGATTTCATACGTTGTATTCTACCCTATCTGA

mRNA sequence

ATGCCCCCAGGTGCTCGTGCTCGTGTTGGTCTTACTGGACTAACTGTGGCTGAGCACTTCCGTAATGCTGAAGGGCAATGCTTCTCTTCATCGTCAACATTTTTCCGTTTTACCCAGGCTAACTCAGAAGTGTCTGCTTTGCTTGGTCGTATCCCATCTGCCGTCGGTTACCAACCAACCTTGGCTACTGATCTTGGAGGCCTTCAAGAGCGTACCACAACCACAAAGAAAGGTTCTATCACTTCAGTTCAAGCTATCTACGTGCCTGCTGATGACTTGACTGACCCCTGCTCCTGCTACCACTTTTGCTCACTTGGATGCCACAACTATGTTGTCACGACAGGTGCAATCAGGTTTAATTCTGAGATGATTTCATACGTTGTATTCTACCCTATCTGA

Coding sequence (CDS)

ATGCCCCCAGGTGCTCGTGCTCGTGTTGGTCTTACTGGACTAACTGTGGCTGAGCACTTCCGTAATGCTGAAGGGCAATGCTTCTCTTCATCGTCAACATTTTTCCGTTTTACCCAGGCTAACTCAGAAGTGTCTGCTTTGCTTGGTCGTATCCCATCTGCCGTCGGTTACCAACCAACCTTGGCTACTGATCTTGGAGGCCTTCAAGAGCGTACCACAACCACAAAGAAAGGTTCTATCACTTCAGTTCAAGCTATCTACGTGCCTGCTGATGACTTGACTGACCCCTGCTCCTGCTACCACTTTTGCTCACTTGGATGCCACAACTATGTTGTCACGACAGGTGCAATCAGGTTTAATTCTGAGATGATTTCATACGTTGTATTCTACCCTATCTGA

Protein sequence

MPPGARARVGLTGLTVAEHFRNAEGQCFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFNSEMISYVVFYPI

Homology

[Close]

BLAST of CmaCh04G014740 vs. Swiss-Prot
Match: ATPBM_HEVBR (ATP synthase subunit beta, mitochondrial OS=Hevea brasiliensis GN=ATPB PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.1e-39
Identity = 94/132 (71.21%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAEHFR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 308 PPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 367

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LATDLGGLQER TTTKKGSITSVQAIYVPADDLTDP     F  L       TT   R  
Sbjct: 368 LATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD-----ATTVLSRQI 427

Query: 122 SEMISYVVFYPI 133
           SE+  Y    P+
Sbjct: 428 SELGIYPAVDPL 434

[Close]

BLAST of CmaCh04G014740 vs. Swiss-Prot
Match: ATPBM_ORYSJ (ATP synthase subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=ATPB PE=1 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 3.1e-39
Identity = 94/132 (71.21%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAEHFR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 298 PPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 357

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LATDLGGLQER TTTKKGSITSVQAIYVPADDLTDP     F  L       TT   R  
Sbjct: 358 LATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD-----ATTVLSRQI 417

Query: 122 SEMISYVVFYPI 133
           SE+  Y    P+
Sbjct: 418 SELGIYPAVDPL 424

[Close]

BLAST of CmaCh04G014740 vs. Swiss-Prot
Match: ATPBM_MAIZE (ATP synthase subunit beta, mitochondrial OS=Zea mays GN=ATPB PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.1e-39
Identity = 94/132 (71.21%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAEHFR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 299 PPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 358

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LATDLGGLQER TTTKKGSITSVQAIYVPADDLTDP     F  L       TT   R  
Sbjct: 359 LATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD-----ATTVLSRQI 418

Query: 122 SEMISYVVFYPI 133
           SE+  Y    P+
Sbjct: 419 SELGIYPAVDPL 425

[Close]

BLAST of CmaCh04G014740 vs. Swiss-Prot
Match: ATPBM_NICPL (ATP synthase subunit beta, mitochondrial OS=Nicotiana plumbaginifolia GN=ATPB PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.1e-39
Identity = 94/132 (71.21%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAEHFR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 306 PPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 365

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LATDLGGLQER TTTKKGSITSVQAIYVPADDLTDP     F  L       TT   R  
Sbjct: 366 LATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD-----ATTVLSRQI 425

Query: 122 SEMISYVVFYPI 133
           SE+  Y    P+
Sbjct: 426 SELGIYPAVDPL 432

[Close]

BLAST of CmaCh04G014740 vs. Swiss-Prot
Match: ATPBM_DAUCA (ATP synthase subunit beta, mitochondrial OS=Daucus carota GN=ATPB PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.4e-38
Identity = 92/132 (69.70%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPG+RARVGLTGLTVAEHFR+AEG+         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 294 PPGSRARVGLTGLTVAEHFRDAEGEDVLLFVDKRFRFTQANSEVSALLGRIPSAVGYQPT 353

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LATDLGGLQER TTTKKGSITSVQAIYVPADDLTDP     F  L       TT   R  
Sbjct: 354 LATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD-----ATTVLSRQI 413

Query: 122 SEMISYVVFYPI 133
           SE+  Y    P+
Sbjct: 414 SELGIYPAVDPL 420

[Close]

BLAST of CmaCh04G014740 vs. TrEMBL
Match: B4IKQ8_DROSE (ATP synthase subunit beta OS=Drosophila sechellia GN=Dsec\GM13022 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.0e-38
Identity = 84/109 (77.06%), Postives = 90/109 (82.57%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARV LTGLTVAE+FR+ EGQ         FRFTQA SEVSALLGRIPSAVGYQPT
Sbjct: 252 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 311

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHN 110
           LATD+G +QER TTTKKGSITSVQAIYVPADDLTDP  CY+  S GCH+
Sbjct: 312 LATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPCYYIRSFGCHH 360

[Close]

BLAST of CmaCh04G014740 vs. TrEMBL
Match: I1HQG8_BRADI (ATP synthase subunit beta OS=Brachypodium distachyon PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-37
Identity = 88/119 (73.95%), Postives = 91/119 (76.47%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAEHFR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 298 PPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 357

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRF 120
           LATDLGGLQER TTTKKGSITSVQAIYVPADDLTDP     F  L     +     + F
Sbjct: 358 LATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQACLHF 416

[Close]

BLAST of CmaCh04G014740 vs. TrEMBL
Match: F2D5B2_HORVD (ATP synthase subunit beta OS=Hordeum vulgare var. distichum PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-37
Identity = 94/132 (71.21%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAEHFR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 301 PPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 360

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LATDLGGLQER TTTKKGSITSVQAIYVPADDLTDP     F  L       TT   R  
Sbjct: 361 LATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD-----ATTVLSRSI 420

Query: 122 SEMISYVVFYPI 133
           SE+  Y    P+
Sbjct: 421 SELGIYPAVDPL 427

[Close]

BLAST of CmaCh04G014740 vs. TrEMBL
Match: M0Z2C1_HORVD (ATP synthase subunit beta OS=Hordeum vulgare var. distichum PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-37
Identity = 94/132 (71.21%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAEHFR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 165 PPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 224

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LATDLGGLQER TTTKKGSITSVQAIYVPADDLTDP     F  L       TT   R  
Sbjct: 225 LATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD-----ATTVLSRSI 284

Query: 122 SEMISYVVFYPI 133
           SE+  Y    P+
Sbjct: 285 SELGIYPAVDPL 291

[Close]

BLAST of CmaCh04G014740 vs. TrEMBL
Match: A0A067FBS5_CITSI (ATP synthase subunit beta OS=Citrus sinensis GN=CISIN_1g008610mg PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-37
Identity = 90/127 (70.87%), Postives = 97/127 (76.38%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAEHFR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 304 PPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 363

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LATDLGGLQER TTTKKGSITSVQAIYVPADDLTDP     F  L      V +  +R +
Sbjct: 364 LATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDA--TTVLSRQVRMD 423

Query: 122 SEMISYV 128
           +  + Y+
Sbjct: 424 TSGLMYL 428

[Close]

BLAST of CmaCh04G014740 vs. TAIR10
Match: AT5G08670.1 (AT5G08670.1 ATP synthase alpha/beta family protein)

HSP 1 Score: 156.4 bits (394), Expect = 1.2e-38
Identity = 91/132 (68.94%), Postives = 96/132 (72.73%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAE+FR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 302 PPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 361

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LA+DLG LQER TTTKKGSITSVQAIYVPADDLTDP     F  L       TT   R  
Sbjct: 362 LASDLGALQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD-----ATTVLSRQI 421

Query: 122 SEMISYVVFYPI 133
           SE+  Y    P+
Sbjct: 422 SELGIYPAVDPL 428

[Close]

BLAST of CmaCh04G014740 vs. TAIR10
Match: AT5G08680.1 (AT5G08680.1 ATP synthase alpha/beta family protein)

HSP 1 Score: 156.4 bits (394), Expect = 1.2e-38
Identity = 91/132 (68.94%), Postives = 96/132 (72.73%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAE+FR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 305 PPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 364

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LA+DLG LQER TTTKKGSITSVQAIYVPADDLTDP     F  L       TT   R  
Sbjct: 365 LASDLGALQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD-----ATTVLSRQI 424

Query: 122 SEMISYVVFYPI 133
           SE+  Y    P+
Sbjct: 425 SELGIYPAVDPL 431

[Close]

BLAST of CmaCh04G014740 vs. TAIR10
Match: AT5G08690.1 (AT5G08690.1 ATP synthase alpha/beta family protein)

HSP 1 Score: 156.4 bits (394), Expect = 1.2e-38
Identity = 91/132 (68.94%), Postives = 96/132 (72.73%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAE+FR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 302 PPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 361

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LA+DLG LQER TTTKKGSITSVQAIYVPADDLTDP     F  L       TT   R  
Sbjct: 362 LASDLGALQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD-----ATTVLSRQI 421

Query: 122 SEMISYVVFYPI 133
           SE+  Y    P+
Sbjct: 422 SELGIYPAVDPL 428

[Close]

BLAST of CmaCh04G014740 vs. TAIR10
Match: ATCG00480.1 (ATCG00480.1 ATP synthase subunit beta)

HSP 1 Score: 134.0 bits (336), Expect = 6.6e-32
Identity = 70/105 (66.67%), Postives = 80/105 (76.19%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGAR RVGLT LT+AE+FR+   Q         FRF QA SEVSALLGR+PSAVGYQPT
Sbjct: 242 PPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPT 301

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSL 106
           L+T++G LQER T+TKKGSITS+QA+YVPADDLTDP     F  L
Sbjct: 302 LSTEMGTLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 346

[Close]

BLAST of CmaCh04G014740 vs. NCBI nr
Match: gi|195355680|ref|XP_002044318.1| (GM13022 [Drosophila sechellia])

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-37
Identity = 84/109 (77.06%), Postives = 90/109 (82.57%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARV LTGLTVAE+FR+ EGQ         FRFTQA SEVSALLGRIPSAVGYQPT
Sbjct: 252 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 311

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHN 110
           LATD+G +QER TTTKKGSITSVQAIYVPADDLTDP  CY+  S GCH+
Sbjct: 312 LATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPCYYIRSFGCHH 360

[Close]

BLAST of CmaCh04G014740 vs. NCBI nr
Match: gi|971505687|dbj|GAQ92517.1| (F0F1-type ATP synthase beta subunit [Klebsormidium flaccidum])

HSP 1 Score: 162.9 bits (411), Expect = 3.7e-37
Identity = 94/132 (71.21%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAEHFR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 307 PPGARARVGLTGLTVAEHFRDAEGQDVLFFVDNIFRFTQANSEVSALLGRIPSAVGYQPT 366

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LATDLGGLQER TTTKKGSITSVQAIYVPADDLTDP     F  L       TT   R  
Sbjct: 367 LATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD-----ATTVLSRAI 426

Query: 122 SEMISYVVFYPI 133
           SE+  Y    P+
Sbjct: 427 SELGIYPAVDPL 433

[Close]

BLAST of CmaCh04G014740 vs. NCBI nr
Match: gi|641845872|gb|KDO64758.1| (hypothetical protein CISIN_1g008610mg [Citrus sinensis])

HSP 1 Score: 162.9 bits (411), Expect = 3.7e-37
Identity = 90/127 (70.87%), Postives = 97/127 (76.38%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAEHFR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 304 PPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 363

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LATDLGGLQER TTTKKGSITSVQAIYVPADDLTDP     F  L      V +  +R +
Sbjct: 364 LATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDA--TTVLSRQVRMD 423

Query: 122 SEMISYV 128
           +  + Y+
Sbjct: 424 TSGLMYL 428

[Close]

BLAST of CmaCh04G014740 vs. NCBI nr
Match: gi|326492854|dbj|BAJ90283.1| (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 162.9 bits (411), Expect = 3.7e-37
Identity = 94/132 (71.21%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAEHFR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 301 PPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 360

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LATDLGGLQER TTTKKGSITSVQAIYVPADDLTDP     F  L       TT   R  
Sbjct: 361 LATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD-----ATTVLSRSI 420

Query: 122 SEMISYVVFYPI 133
           SE+  Y    P+
Sbjct: 421 SELGIYPAVDPL 427

[Close]

BLAST of CmaCh04G014740 vs. NCBI nr
Match: gi|242054033|ref|XP_002456162.1| (hypothetical protein SORBIDRAFT_03g031470 [Sorghum bicolor])

HSP 1 Score: 162.5 bits (410), Expect = 4.9e-37
Identity = 94/132 (71.21%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 2   PPGARARVGLTGLTVAEHFRNAEGQ-CFSSSSTFFRFTQANSEVSALLGRIPSAVGYQPT 61
           PPGARARVGLTGLTVAEHFR+AEGQ         FRFTQANSEVSALLGRIPSAVGYQPT
Sbjct: 300 PPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPT 359

Query: 62  LATDLGGLQERTTTTKKGSITSVQAIYVPADDLTDPCSCYHFCSLGCHNYVVTTGAIRFN 121
           LATDLGGLQER TTTKKGSITSVQAIYVPADDLTDP     F  L       TT   R  
Sbjct: 360 LATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD-----ATTVLSRQI 419

Query: 122 SEMISYVVFYPI 133
           SE+  Y    P+
Sbjct: 420 SELGIYPAVDPL 426

The following BLAST results are available for this feature:

BLAST of CmaCh04G014740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATPBM_HEVBR	3.1e-39	71.21	ATP synthase subunit beta, mitochondrial OS=Hevea brasiliensis GN=ATPB PE=2 SV=1	[more]
ATPBM_ORYSJ	3.1e-39	71.21	ATP synthase subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=ATPB...	[more]
ATPBM_MAIZE	3.1e-39	71.21	ATP synthase subunit beta, mitochondrial OS=Zea mays GN=ATPB PE=2 SV=1	[more]
ATPBM_NICPL	3.1e-39	71.21	ATP synthase subunit beta, mitochondrial OS=Nicotiana plumbaginifolia GN=ATPB PE...	[more]
ATPBM_DAUCA	4.4e-38	69.70	ATP synthase subunit beta, mitochondrial OS=Daucus carota GN=ATPB PE=3 SV=1	[more]

BLAST of CmaCh04G014740 vs. TrEMBL


Match Name	E-value	Identity	Description
B4IKQ8_DROSE	9.0e-38	77.06	ATP synthase subunit beta OS=Drosophila sechellia GN=Dsec\GM13022 PE=4 SV=1	[more]
I1HQG8_BRADI	2.6e-37	73.95	ATP synthase subunit beta OS=Brachypodium distachyon PE=4 SV=1	[more]
F2D5B2_HORVD	2.6e-37	71.21	ATP synthase subunit beta OS=Hordeum vulgare var. distichum PE=2 SV=1	[more]
M0Z2C1_HORVD	2.6e-37	71.21	ATP synthase subunit beta OS=Hordeum vulgare var. distichum PE=3 SV=1	[more]
A0A067FBS5_CITSI	2.6e-37	70.87	ATP synthase subunit beta OS=Citrus sinensis GN=CISIN_1g008610mg PE=4 SV=1	[more]

BLAST of CmaCh04G014740 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08670.1	1.2e-38	68.94	ATP synthase alpha/beta family protein	[more]
AT5G08680.1	1.2e-38	68.94	ATP synthase alpha/beta family protein	[more]
AT5G08690.1	1.2e-38	68.94	ATP synthase alpha/beta family protein	[more]
ATCG00480.1	6.6e-32	66.67	ATCG00480.1 ATP synthase subunit beta	[more]

BLAST of CmaCh04G014740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|195355680\|ref\|XP_002044318.1\|	1.3e-37	77.06	GM13022 [Drosophila sechellia]	[more]
gi\|971505687\|dbj\|GAQ92517.1\|	3.7e-37	71.21	F0F1-type ATP synthase beta subunit [Klebsormidium flaccidum]	[more]
gi\|641845872\|gb\|KDO64758.1\|	3.7e-37	70.87	hypothetical protein CISIN_1g008610mg [Citrus sinensis]	[more]
gi\|326492854\|dbj\|BAJ90283.1\|	3.7e-37	71.21	predicted protein [Hordeum vulgare subsp. vulgare]	[more]
gi\|242054033\|ref\|XP_002456162.1\|	4.9e-37	71.21	hypothetical protein SORBIDRAFT_03g031470 [Sorghum bicolor]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G014740.1	CmaCh04G014740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	PFAM	PF00006	ATP-synt_ab	coord: 1..98 score: 1.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 1..98 score: 2.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..107 score: 1.39
None	No IPR available	PANTHER	PTHR15184	ATP SYNTHASE	coord: 2..96 score: 1.1
None	No IPR available	PANTHER	PTHR15184:SF45	ATP SYNTHASE SUBUNIT BETA-1, MITOCHONDRIAL-RELATED	coord: 2..96 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G014740	Cucumber (Chinese Long) v3	cmacucB0885
CmaCh04G014740	Cucumber (Chinese Long) v3	cmacucB0875
CmaCh04G014740	Watermelon (97103) v2	cmawmbB711
CmaCh04G014740	Watermelon (97103) v2	cmawmbB758
CmaCh04G014740	Wax gourd	cmawgoB0833
CmaCh04G014740	Wax gourd	cmawgoB0893
CmaCh04G014740	Cucurbita maxima (Rimu)	cmacmaB329
CmaCh04G014740	Cucurbita maxima (Rimu)	cmacmaB402
CmaCh04G014740	Cucurbita maxima (Rimu)	cmacmaB537
CmaCh04G014740	Cucumber (Gy14) v1	cgycmaB0781
CmaCh04G014740	Cucumber (Gy14) v1	cgycmaB0801
CmaCh04G014740	Cucurbita moschata (Rifu)	cmacmoB696
CmaCh04G014740	Cucurbita moschata (Rifu)	cmacmoB706
CmaCh04G014740	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G014740	Cucurbita moschata (Rifu)	cmacmoB742
CmaCh04G014740	Wild cucumber (PI 183967)	cmacpiB744
CmaCh04G014740	Wild cucumber (PI 183967)	cmacpiB755
CmaCh04G014740	Cucumber (Chinese Long) v2	cmacuB737
CmaCh04G014740	Cucumber (Chinese Long) v2	cmacuB748
CmaCh04G014740	Melon (DHL92) v3.5.1	cmameB630
CmaCh04G014740	Melon (DHL92) v3.5.1	cmameB640
CmaCh04G014740	Watermelon (Charleston Gray)	cmawcgB640
CmaCh04G014740	Watermelon (Charleston Gray)	cmawcgB655
CmaCh04G014740	Watermelon (Charleston Gray)	cmawcgB666
CmaCh04G014740	Watermelon (97103) v1	cmawmB699
CmaCh04G014740	Watermelon (97103) v1	cmawmB716
CmaCh04G014740	Cucurbita pepo (Zucchini)	cmacpeB700
CmaCh04G014740	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G014740	Bottle gourd (USVL1VR-Ls)	cmalsiB627
CmaCh04G014740	Bottle gourd (USVL1VR-Ls)	cmalsiB669
CmaCh04G014740	Cucumber (Gy14) v2	cgybcmaB662
CmaCh04G014740	Cucumber (Gy14) v2	cgybcmaB672
CmaCh04G014740	Melon (DHL92) v3.6.1	cmamedB712
CmaCh04G014740	Melon (DHL92) v3.6.1	cmamedB726
CmaCh04G014740	Silver-seed gourd	carcmaB1102
CmaCh04G014740	Silver-seed gourd	carcmaB1170
CmaCh04G014740	Silver-seed gourd	carcmaB1457