CmaCh04G010300 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G010300
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionSelf-incompatibility protein
LocationCma_Chr04 : 5351026 .. 5351517 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCGCATAAGCTCGTGTTCTTGATTGGACTCTTGCTTATCACCTTGTTTGACACGTCGATAGCCAAAGGCAAGTTTAGTAAGAATAAAAACCAAGACATAATCCCTAAACGACCATATTCACCACCAAGGACACCCGTCATTCAATTTCGTAAATTTCAAATCGAGATTCATAATGACTTGAAAATGTTTATATTAGACAGTCGTTGTTACTCGAAAGATAATGATTTAGGGTTGCATATATTGTTCCCCGACGACCAACAAAACTGGACGTTTAGAGCTAATTTTATGGAGACGACCAAATTCATCTGCAGATTGGAATGGCAATACGGGTTGTTGATGTTTGATTCTTTTGTGAGTGATAATAATTTCTTGGACCGTCATTGTGAGAACTCAGTGTGTGGTTGGAGTGCAAGGCAAGATGGAGTTTATTTGACCAATCAAATTGGTCAATATGTTTTTTATGATTATTGGGATATGTTGTTGTAA

mRNA sequence

ATGGCGTCGCATAAGCTCGTGTTCTTGATTGGACTCTTGCTTATCACCTTGTTTGACACGTCGATAGCCAAAGGCAAGTTTAGTAAGAATAAAAACCAAGACATAATCCCTAAACGACCATATTCACCACCAAGGACACCCGTCATTCAATTTCGTAAATTTCAAATCGAGATTCATAATGACTTGAAAATTCGTTGTTACTCGAAAGATAATGATTTAGGGTTGCATATATTGTTCCCCGACGACCAACAAAACTGGACGTTTAGAGCTAATTTTATGGAGACGACCAAATTCATCTGCAGATTGGAATGGCAATACGGGTTGTTGATGTTTGATTCTTTTGTGAGTGATAATAATTTCTTGGACCGTCATTGTGAGAACTCAGTGTGTGGTTGGAGTGCAAGGCAAGATGGAGTTTATTTGACCAATCAAATTGGTCAATATGTTTTTTATGATTATTGGGATATGTTGTTGTAA

Coding sequence (CDS)

ATGGCGTCGCATAAGCTCGTGTTCTTGATTGGACTCTTGCTTATCACCTTGTTTGACACGTCGATAGCCAAAGGCAAGTTTAGTAAGAATAAAAACCAAGACATAATCCCTAAACGACCATATTCACCACCAAGGACACCCGTCATTCAATTTCGTAAATTTCAAATCGAGATTCATAATGACTTGAAAATTCGTTGTTACTCGAAAGATAATGATTTAGGGTTGCATATATTGTTCCCCGACGACCAACAAAACTGGACGTTTAGAGCTAATTTTATGGAGACGACCAAATTCATCTGCAGATTGGAATGGCAATACGGGTTGTTGATGTTTGATTCTTTTGTGAGTGATAATAATTTCTTGGACCGTCATTGTGAGAACTCAGTGTGTGGTTGGAGTGCAAGGCAAGATGGAGTTTATTTGACCAATCAAATTGGTCAATATGTTTTTTATGATTATTGGGATATGTTGTTGTAA

Protein sequence

MASHKLVFLIGLLLITLFDTSIAKGKFSKNKNQDIIPKRPYSPPRTPVIQFRKFQIEIHNDLKIRCYSKDNDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGLLMFDSFVSDNNFLDRHCENSVCGWSARQDGVYLTNQIGQYVFYDYWDMLL
Homology
[Close]
BLAST of CmaCh04G010300 vs. TrEMBL
Match: A0A0A0KSN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G538550 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.5e-42
Identity = 89/163 (54.60%), Postives = 110/163 (67.48%), Query Frame = 1 

Query: 1   MASHKLVFLIGLLLITLFDTSIAKGKFSKNKNQDIIPKRPYSPPRTPVIQFRKFQIEIHN 60
           MA H LV LI L LI LFD S+A+  F+              P ++ +IQ   +QIEIHN
Sbjct: 1   MAPHLLVLLIFLFLIVLFDMSMARFSFA--------------PQKSSIIQLHHYQIEIHN 60

Query: 61  DLKI-----RCYSKDNDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGLLMFDSFV 120
           DL++      C+SKDNDLGLHILFP + Q+W+F+ N  ETTKF C LEW+ GLL FDSF 
Sbjct: 61  DLEMYLLDSHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFK 120

Query: 121 SDNNFLDRHCENSVCGWSARQDGVYLTNQIGQYVFYDYWDMLL 159
           +++NFL+  C N  C WSARQDGVYLTN  G+YVF DYWDML+
Sbjct: 121 TNHNFLNNFCGNLTCSWSARQDGVYLTNVKGEYVFQDYWDMLI 149

[Close]
BLAST of CmaCh04G010300 vs. TrEMBL
Match: A0A0A0KL79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G016040 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.8e-37
Identity = 73/134 (54.48%), Postives = 95/134 (70.90%), Query Frame = 1 

Query: 29  KNKNQDIIPKRPYSPPRTPVIQFRKFQIEIHNDLKI-----RCYSKDNDLGLHILFPDDQ 88
           K KN+   PK   S P  PV+ F +F +EIHNDL++      CYSKD+DLGLHILFPD++
Sbjct: 5   KAKNKSPTPK--LSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDEK 64

Query: 89  QNWTFRANFMETTKFICRLEWQYGLLMFDSFVSDNNFLDRHCENSVCGWSARQDGVYLTN 148
           Q+W+F+ N++ TT F CRLEW+ G L FDSF S  +F+  +C N  C WSARQDGVYL N
Sbjct: 65  QDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKSAPDFVTNYCGNQTCIWSARQDGVYLNN 124

Query: 149 QIGQYVFYDYWDML 158
             G+ VFY+YW+M+
Sbjct: 125 AAGEQVFYNYWEMI 136

[Close]
BLAST of CmaCh04G010300 vs. TrEMBL
Match: A0A0A0KIQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G017790 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.8e-27
Identity = 65/133 (48.87%), Postives = 89/133 (66.92%), Query Frame = 1 

Query: 1   MASHKLV-FLIGLLLITLFDTSIAKGKFSKNKNQDIIPKRPYSPPRTPVIQFRKFQIEIH 60
           MA  +L+  L+ LLL+T F+ S+AK K +K+K +    K     P  P++ F KF++EIH
Sbjct: 1   MAFQRLMPLLLVLLLLTSFNVSMAKKKKAKSKTE----KPDLPDPNNPIVSFEKFRVEIH 60

Query: 61  NDLKI-----RCYSKDNDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGLLMFDSF 120
           NDL +     RCYSKD++ GLH+LFPD+QQNW+F+ N+ +TT F CRLEW+ G L FDSF
Sbjct: 61  NDLNMYLLDSRCYSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIGYLEFDSF 120

Query: 121 VSDNNFLDRHCEN 128
            SD  F+   C N
Sbjct: 121 KSDPAFVTDFCCN 129

[Close]
BLAST of CmaCh04G010300 vs. TrEMBL
Match: V4T9D0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024107mg PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.4e-15
Identity = 41/98 (41.84%), Postives = 56/98 (57.14%), Query Frame = 1 

Query: 59  HNDLKIRCYSKDNDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGLLMFDSFVSDN 118
           ++ L+  C SKD+DLGL  L    + NWTFR NF  TT F C L W  G    D + +D+
Sbjct: 38  NSTLEAHCKSKDDDLGLRRLAAQTEFNWTFRVNFWSTTLFFCDLRWASGHKACDVYCTDD 97

Query: 119 NFLDRHCENSVCGWSARQDGVY-LTNQIGQYVFYDYWD 156
            FL+++C    C WSAR DG+Y  + +  +YV    WD
Sbjct: 98  QFLNKYCAYDFCRWSARDDGIYAFSEKKKRYVLAHKWD 135

[Close]
BLAST of CmaCh04G010300 vs. TrEMBL
Match: A0A067FI95_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g045824mg PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.4e-15
Identity = 41/98 (41.84%), Postives = 56/98 (57.14%), Query Frame = 1 

Query: 59  HNDLKIRCYSKDNDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGLLMFDSFVSDN 118
           ++ L+  C SKD+DLGL  L    + NWTFR NF  TT F C L W  G    D + +D+
Sbjct: 8   NSTLEAHCKSKDDDLGLRRLAAQTEFNWTFRVNFWSTTLFFCDLRWASGHKACDVYCTDD 67

Query: 119 NFLDRHCENSVCGWSARQDGVY-LTNQIGQYVFYDYWD 156
            FL+++C    C WSAR DG+Y  + +  +YV    WD
Sbjct: 68  QFLNKYCAYDFCRWSARDDGIYAFSEKKKRYVLAHKWD 105

[Close]
BLAST of CmaCh04G010300 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 58.2 bits (139), Expect = 5.5e-09
Identity = 31/88 (35.23%), Postives = 44/88 (50.00%), Query Frame = 1 

Query: 55  QIEIHNDLKIRCYSKDNDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGLLMFDSF 114
           Q+E    LK+ C SKD+DLG HIL       +TF  N  +TT F C+++          F
Sbjct: 34  QLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDF 93

Query: 115 VSDNNFLDRHCENSVCGWSARQDGVYLT 143
           V+      +  E S C W  R+DG+Y +
Sbjct: 94  VAYETSWSKALEAS-CKWIGREDGIYFS 120

[Close]
BLAST of CmaCh04G010300 vs. TAIR10
Match: AT1G26798.1 (AT1G26798.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-08
Identity = 39/150 (26.00%), Postives = 65/150 (43.33%), Query Frame = 1 

Query: 1   MASHKLVFLIGLLLITLFDTSIAKGKFSKNKNQDIIPKRPYSPPRTPVIQFRKFQIEIHN 60
           + +H+ + ++ +  + +F TS+A   F    + D+    P++P    +I      +  H 
Sbjct: 4   LTNHQFISVL-ITTLVIFKTSLA---FENYTSVDV--DLPFAPKHVIIIN----TLNPHE 63

Query: 61  DLKIRCYSKDNDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGLLMFDSFVSDNNF 120
            L + C +K  DLG+H L P +Q ++ FR N   TT + C   W      FD F  D + 
Sbjct: 64  RLVVHCRNKGKDLGVHALEPQEQIDFRFRVNLRRTTTYTCTFSWPGNAKTFDIFRVDRDD 123

Query: 121 LDRH------------CENSVCGWSARQDG 139
             +             CE   C   AR+DG
Sbjct: 124 NSKSTCGICRECIWYICETGPC--RARRDG 141

[Close]
BLAST of CmaCh04G010300 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-08
Identity = 40/129 (31.01%), Postives = 61/129 (47.29%), Query Frame = 1 

Query: 33  QDIIPKRPYSPPRTPVIQFRKFQIEIHNDLK------IRCYSKDNDLGLHILFPDDQQNW 92
           QD +  R  +     V +  ++Q+ + N L       I C SK+NDLG   L   D+ +W
Sbjct: 20  QDHVLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSW 79

Query: 93  TFRANFMETTKFICRLEWQYGLLMFDSFVSDNNFLDRHCENSVCGWSARQDGVYLTNQ-I 152
            F  N + +T F C +    G +    F  D+  L   C+   C W+A+ DG+YL N  I
Sbjct: 80  NFGENMLHSTLFWCYMSKDDGHMNVKVFW-DDVILFHRCDWKNCVWTAKNDGLYLWNSAI 139

Query: 153 GQYVFYDYW 155
           G+ V  + W
Sbjct: 140 GEDVLSEKW 147

[Close]
BLAST of CmaCh04G010300 vs. TAIR10
Match: AT1G26797.1 (AT1G26797.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-08
Identity = 38/139 (27.34%), Postives = 59/139 (42.45%), Query Frame = 1 

Query: 12  LLLITLFDTSIAKGKFSKNKNQDIIPKRPYSPPRTPVIQFRKFQIEIHNDLKIRCYSKDN 71
           + ++ +F TS+A   FS      +    P+SP    +I      +  H  L + C +K  
Sbjct: 3   ITVLVIFKTSLAFENFSS-----VDGNFPFSPKHVIIIN----TLHPHGKLYVHCRNKGE 62

Query: 72  DLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGLLMFDSFVSDNNFLDRH------- 131
           DLGLH +   +Q ++ FR N   TT + C+  W      FD F +D +   +        
Sbjct: 63  DLGLHKIEYREQIDFRFRVNLRRTTTYTCKFSWPGNEKTFDIFRADRDDSSKSTSGICRE 122

Query: 132 -----CENSVCGWSARQDG 139
                CE   C   AR+DG
Sbjct: 123 CIWYICETGPC--RARRDG 130

[Close]
BLAST of CmaCh04G010300 vs. TAIR10
Match: AT5G06030.1 (AT5G06030.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 35/103 (33.98%), Postives = 51/103 (49.51%), Query Frame = 1 

Query: 56  IEIHND--LKIRCYSKDNDLGLHILFPDDQQNWTFRANFMETTKFICRL-EWQYGLLMFD 115
           I+ +ND  L I C S+D+DLG HIL   +   W F  NF  +T   C   + Q    +F 
Sbjct: 50  IQNYNDYLLAIHCKSRDDDLGFHILAKGELFGWKFHVNFRYSTLCFCGFSQRQINKGVFI 109

Query: 116 SFVSDNNFLDRHCENSVCGWSARQDGVYLTNQIGQ--YVFYDY 154
            +V+  +F    C N  C W A +DG +    I    Y+FY++
Sbjct: 110 IYVASRDFY--RCAN--CTWKAEKDGFHGYGDIPTRGYLFYNW 148

[Close]
BLAST of CmaCh04G010300 vs. NCBI nr
Match: gi|700196255|gb|KGN51432.1| (hypothetical protein Csa_5G538550 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 7.9e-42
Identity = 89/163 (54.60%), Postives = 110/163 (67.48%), Query Frame = 1 

Query: 1   MASHKLVFLIGLLLITLFDTSIAKGKFSKNKNQDIIPKRPYSPPRTPVIQFRKFQIEIHN 60
           MA H LV LI L LI LFD S+A+  F+              P ++ +IQ   +QIEIHN
Sbjct: 1   MAPHLLVLLIFLFLIVLFDMSMARFSFA--------------PQKSSIIQLHHYQIEIHN 60

Query: 61  DLKI-----RCYSKDNDLGLHILFPDDQQNWTFRANFMETTKFICRLEWQYGLLMFDSFV 120
           DL++      C+SKDNDLGLHILFP + Q+W+F+ N  ETTKF C LEW+ GLL FDSF 
Sbjct: 61  DLEMYLLDSHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFK 120

Query: 121 SDNNFLDRHCENSVCGWSARQDGVYLTNQIGQYVFYDYWDMLL 159
           +++NFL+  C N  C WSARQDGVYLTN  G+YVF DYWDML+
Sbjct: 121 TNHNFLNNFCGNLTCSWSARQDGVYLTNVKGEYVFQDYWDMLI 149

[Close]
BLAST of CmaCh04G010300 vs. NCBI nr
Match: gi|700194417|gb|KGN49594.1| (hypothetical protein Csa_5G016040 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 2.6e-37
Identity = 73/134 (54.48%), Postives = 95/134 (70.90%), Query Frame = 1 

Query: 29  KNKNQDIIPKRPYSPPRTPVIQFRKFQIEIHNDLKI-----RCYSKDNDLGLHILFPDDQ 88
           K KN+   PK   S P  PV+ F +F +EIHNDL++      CYSKD+DLGLHILFPD++
Sbjct: 5   KAKNKSPTPK--LSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDEK 64

Query: 89  QNWTFRANFMETTKFICRLEWQYGLLMFDSFVSDNNFLDRHCENSVCGWSARQDGVYLTN 148
           Q+W+F+ N++ TT F CRLEW+ G L FDSF S  +F+  +C N  C WSARQDGVYL N
Sbjct: 65  QDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKSAPDFVTNYCGNQTCIWSARQDGVYLNN 124

Query: 149 QIGQYVFYDYWDML 158
             G+ VFY+YW+M+
Sbjct: 125 AAGEQVFYNYWEMI 136

[Close]
BLAST of CmaCh04G010300 vs. NCBI nr
Match: gi|659134192|ref|XP_008467075.1| (PREDICTED: uncharacterized protein LOC103504513, partial [Cucumis melo])

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-35
Identity = 69/134 (51.49%), Postives = 92/134 (68.66%), Query Frame = 1 

Query: 29  KNKNQDIIPKRPYSPPRTPVIQFRKFQIEIHNDLKI-----RCYSKDNDLGLHILFPDDQ 88
           K   ++ +PK     P  P++ F  F++EIHN+L        CYSKD+DLGLH L+P++Q
Sbjct: 14  KKSPKNRVPKPDLPLPNNPLVSFEGFRVEIHNELLTYILDSSCYSKDDDLGLHRLYPNEQ 73

Query: 89  QNWTFRANFMETTKFICRLEWQYGLLMFDSFVSDNNFLDRHCENSVCGWSARQDGVYLTN 148
           QNW+F+ N++ TT F C+LEW+   L FDSF SD +F+  +C N  C WSARQDGVYL N
Sbjct: 74  QNWSFKGNWIATTDFHCKLEWEIAYLEFDSFKSDPDFVTNYCGNRTCIWSARQDGVYLNN 133

Query: 149 QIGQYVFYDYWDML 158
            +GQ VFYDYW+ML
Sbjct: 134 AVGQQVFYDYWEML 147

[Close]
BLAST of CmaCh04G010300 vs. NCBI nr
Match: gi|659105279|ref|XP_008453057.1| (PREDICTED: uncharacterized protein LOC103493879, partial [Cucumis melo])

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-32
Identity = 64/108 (59.26%), Postives = 81/108 (75.00%), Query Frame = 1 

Query: 41  YSPPRTPVIQFRKFQIEIHNDLKI-----RCYSKDNDLGLHILFPDDQQNWTFRANFMET 100
           ++P +  +IQ R +Q++IHNDL++      C+SKDNDLGLHILFP +QQ+W+F  N  ET
Sbjct: 8   FAPQKPSIIQLRHYQVKIHNDLEMYLLDSHCFSKDNDLGLHILFPGEQQDWSFEDNIFET 67

Query: 101 TKFICRLEWQYGLLMFDSFVSDNNFLDRHCENSVCGWSARQDGVYLTN 144
           TKF CRLEW+ GLL FDSF SD +FL+  C N  C WSA+QDGVYLTN
Sbjct: 68  TKFRCRLEWENGLLEFDSFKSDLDFLNNFCGNLTCSWSAKQDGVYLTN 115

[Close]
BLAST of CmaCh04G010300 vs. NCBI nr
Match: gi|659105271|ref|XP_008453055.1| (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo])

HSP 1 Score: 145.2 bits (365), Expect = 9.7e-32
Identity = 67/134 (50.00%), Postives = 91/134 (67.91%), Query Frame = 1 

Query: 29  KNKNQDIIPKRPYSPPRTPVIQFRKFQIEIHNDLKI-----RCYSKDNDLGLHILFPDDQ 88
           K K+Q+  P+ P   P  P++ F KF I I+N+L++      CYSKD+DLG  +L+P+D+
Sbjct: 7   KIKSQETGPELP--KPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDE 66

Query: 89  QNWTFRANFMETTKFICRLEWQYGLLMFDSFVSDNNFLDRHCENSVCGWSARQDGVYLTN 148
           Q+W+FR N++ TT F C+LEW+ G L FD+F +D  FL   C  S C WSARQDGVYLTN
Sbjct: 67  QSWSFRGNWLGTTNFHCKLEWENGYLEFDAFSNDVKFLTNFCAKSSCCWSARQDGVYLTN 126

Query: 149 QIGQYVFYDYWDML 158
           Q GQ VF   W+M+
Sbjct: 127 QNGQVVFNQNWEMI 138

The following BLAST results are available for this feature:
BLAST of CmaCh04G010300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh04G010300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSN2_CUCSA5.5e-4254.60Uncharacterized protein OS=Cucumis sativus GN=Csa_5G538550 PE=4 SV=1[more]
A0A0A0KL79_CUCSA1.8e-3754.48Uncharacterized protein OS=Cucumis sativus GN=Csa_5G016040 PE=4 SV=1[more]
A0A0A0KIQ4_CUCSA3.8e-2748.87Uncharacterized protein OS=Cucumis sativus GN=Csa_5G017790 PE=4 SV=1[more]
V4T9D0_9ROSI3.4e-1541.84Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024107mg PE=4 SV=1[more]
A0A067FI95_CITSI3.4e-1541.84Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g045824mg PE=4 S... [more]
BLAST of CmaCh04G010300 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G04350.15.5e-0935.23 Plant self-incompatibility protein S1 family[more]
AT1G26798.11.6e-0826.00 Plant self-incompatibility protein S1 family[more]
AT4G29035.11.6e-0831.01 Plant self-incompatibility protein S1 family[more]
AT1G26797.12.1e-0827.34 Plant self-incompatibility protein S1 family[more]
AT5G06030.11.4e-0733.98 Plant self-incompatibility protein S1 family[more]
BLAST of CmaCh04G010300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196255|gb|KGN51432.1|7.9e-4254.60hypothetical protein Csa_5G538550 [Cucumis sativus][more]
gi|700194417|gb|KGN49594.1|2.6e-3754.48hypothetical protein Csa_5G016040 [Cucumis sativus][more]
gi|659134192|ref|XP_008467075.1|1.1e-3551.49PREDICTED: uncharacterized protein LOC103504513, partial [Cucumis melo][more]
gi|659105279|ref|XP_008453057.1|4.3e-3259.26PREDICTED: uncharacterized protein LOC103493879, partial [Cucumis melo][more]
gi|659105271|ref|XP_008453055.1|9.7e-3250.00PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G010300.1CmaCh04G010300.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 59..150
score: 3.2
NoneNo IPR availablePANTHERPTHR31232FAMILY NOT NAMEDcoord: 49..155
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G010300CSPI05G00480Wild cucumber (PI 183967)cmacpiB739
CmaCh04G010300Cp4.1LG01g07390Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G010300CsaV3_5G014260Cucumber (Chinese Long) v3cmacucB0870
CmaCh04G010300Carg00137Silver-seed gourdcarcmaB0948
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G010300Watermelon (97103) v2cmawmbB780
CmaCh04G010300Wax gourdcmawgoB0889
CmaCh04G010300Cucurbita maxima (Rimu)cmacmaB531
CmaCh04G010300Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G010300Cucurbita moschata (Rifu)cmacmoB731
CmaCh04G010300Melon (DHL92) v3.5.1cmameB707
CmaCh04G010300Watermelon (Charleston Gray)cmawcgB673
CmaCh04G010300Cucurbita pepo (Zucchini)cmacpeB723
CmaCh04G010300Bottle gourd (USVL1VR-Ls)cmalsiB679
CmaCh04G010300Melon (DHL92) v3.6.1cmamedB796