BLAST of CmaCh04G003290 vs. Swiss-Prot
Match:
PP337_ARATH (Pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E53 PE=3 SV=1)
HSP 1 Score: 629.8 bits (1623), Expect = 4.0e-179
Identity = 303/510 (59.41%), Postives = 388/510 (76.08%), Query Frame = 1
Query: 280 SSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPLLIHHKPFSRSKIQALDAVL 339
SS KK + ++L Q + + + T L F K S TPLLI + R++++ALD+V+
Sbjct: 18 SSSMKKKPRHHQQLKQHRQNQYNN-NGFTSLSFTKPSPTPLLIEKQSIHRTQLEALDSVI 77
Query: 340 NDLEASLDNGVPI-DAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRL 399
DLE S G+ + + EIF+SLLETCY LRA+DHG+R+H LIP LR N+G+SSKL+RL
Sbjct: 78 TDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRL 137
Query: 400 YASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHF 459
YAS GY E AH+VFD M +R+ S F+WNSLISGYAELG YEDA+ALYFQM E+GV+PD F
Sbjct: 138 YASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRF 197
Query: 460 TFPRVLKACGGIGSIRVGEAVHRHIVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQI 519
TFPRVLKACGGIGS+++GEA+HR +V+ GF D++VLNALV MYAKCGDI++AR VFD I
Sbjct: 198 TFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMI 257
Query: 520 IHKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVALSTMISNITSSKFKLHIH 579
HKD VSWNSMLTGY HGLL EAL+ F M+Q G EPD VA+S++++ + S K +H
Sbjct: 258 PHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLH 317
Query: 580 GWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPQRDIVSWNTIISAHSNTSKAL 639
GW IR G+EW LS+AN+LI +Y+ G++ +A ++F+QM +RD VSWN IISAHS S L
Sbjct: 318 GWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGL 377
Query: 640 TYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNL 699
YFE M PD +TFVS+LS CA+ +V++G +L+S+M +YGI P +EHYACMVNL
Sbjct: 378 KYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNL 437
Query: 700 YGRAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELN 759
YGRAG++EEAY +I+ M +EAGPTVWGALLYACYLHGN DI EVAA++LFE EPDNE N
Sbjct: 438 YGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHN 497
Query: 760 FKLLMKIYGNAGRIEDEKRVRLMMAERGLD 789
F+LL++IY A R ED +RVR MM +RGL+
Sbjct: 498 FELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
BLAST of CmaCh04G003290 vs. Swiss-Prot
Match:
KCY_PRUAR (UMP-CMP kinase OS=Prunus armeniaca PE=2 SV=1)
HSP 1 Score: 302.0 bits (772), Expect = 1.9e-80
Identity = 153/214 (71.50%), Postives = 174/214 (81.31%), Query Frame = 1
Query: 48 MWRRVASVSHLTFAQKSI-VNKDVCKLKFWEAFSTG--IPRKEKGTFQRDKTPFITFVLG 107
MWRRV SVSHL KS N+ K WE F++ IP KG+ PF+TFVLG
Sbjct: 1 MWRRVTSVSHLFSHSKSTKFNQGASTFKIWETFTSESEIPTPSKGS------PFVTFVLG 60
Query: 108 GPGSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSELTVKL 167
GPGSGKGTQC KIVE FGFTH+SAGD+LRREIAS SA G++IL TI+EGKIVPS++TV+L
Sbjct: 61 GPGSGKGTQCAKIVEAFGFTHVSAGDLLRREIASGSAYGSVILSTIREGKIVPSQVTVEL 120
Query: 168 IQKEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNRNQGR 227
IQKEMESSDNYKFLIDGFPRSE+NR AFEQ IGAEPD+VLFFDCPE EM+KRVLNRNQGR
Sbjct: 121 IQKEMESSDNYKFLIDGFPRSEENRKAFEQTIGAEPDVVLFFDCPEQEMVKRVLNRNQGR 180
Query: 228 VDDNIDTIKKRLKVFSALNLPVVKYYLERGKLYK 259
VDDNIDTIKKRL++F LN PV+ YY +RGKL+K
Sbjct: 181 VDDNIDTIKKRLEIFDELNWPVINYYSQRGKLHK 208
BLAST of CmaCh04G003290 vs. Swiss-Prot
Match:
PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)
HSP 1 Score: 299.7 bits (766), Expect = 9.6e-80
Identity = 163/449 (36.30%), Postives = 256/449 (57.02%), Query Frame = 1
Query: 346 LDNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYM 405
L +G+ ID S+ C R + G +H + R + LL +Y+ G +
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 406 EDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLK 465
+ A VF EM R S S+ S+I+GYA GL +A+ L+ +MEEEG+ PD +T VL
Sbjct: 348 DSAKAVFREMSDR--SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 407
Query: 466 ACGGIGSIRVGEAVHRHIVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIIHKDTVS 525
C + G+ VH I + DIFV NAL+DMYAKCG + A VF ++ KD +S
Sbjct: 408 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 467
Query: 526 WNSMLTGYTRHGLLLEALNTFDQMIQE-GYEPDSVALSTMI---SNITSSKFKLHIHGWA 585
WN+++ GY+++ EAL+ F+ +++E + PD ++ ++ +++++ IHG+
Sbjct: 468 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 527
Query: 586 IRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPQRDIVSWNTIISA---HSNTSKAL 645
+R+G + +ANSL+ MYA G + A LF+ + +D+VSW +I+ H +A+
Sbjct: 528 MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAI 587
Query: 646 TYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNL 705
F M G+ D ++FVSLL C+H LV EG + +++M+ + I PT+EHYAC+V++
Sbjct: 588 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 647
Query: 706 YGRAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELN 765
R G + +AYR I N M + T+WGALL C +H +V +AE AEK+FE EP+N
Sbjct: 648 LARTGDLIKAYRFIEN-MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 707
Query: 766 FKLLMKIYGNAGRIEDEKRVRLMMAERGL 788
+ L+ IY A + E KR+R + +RGL
Sbjct: 708 YVLMANIYAEAEKWEQVKRLRKRIGQRGL 733
BLAST of CmaCh04G003290 vs. Swiss-Prot
Match:
PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 291.2 bits (744), Expect = 3.4e-77
Identity = 155/447 (34.68%), Postives = 256/447 (57.27%), Query Frame = 1
Query: 349 GVPIDAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDA 408
G +D + +SL+ Q L+ ++ P R+V + L++ YAS GY+E+A
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP----HRDVVSYTALIKGYASRGYIENA 223
Query: 409 HQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACG 468
++FDE+ +++ SWN++ISGYAE G Y++AL L+ M + V PD T V+ AC
Sbjct: 224 QKLFDEIPVKDV--VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 283
Query: 469 GIGSIRVGEAVHRHIVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIIHKDTVSWNS 528
GSI +G VH I GF ++ ++NAL+D+Y+KCG++ A +F+++ +KD +SWN+
Sbjct: 284 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 343
Query: 529 MLTGYTRHGLLLEALNTFDQMIQEGYEPDSVALSTMI---SNITSSKFKLHIHGWAIRH- 588
++ GYT L EAL F +M++ G P+ V + +++ +++ + IH + +
Sbjct: 344 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 403
Query: 589 -GIEWNLSIANSLIAMYANSGKINRARWLFEQMPQRDIVSWNTII---SAHSNTSKALTY 648
G+ S+ SLI MYA G I A +F + + + SWN +I + H +
Sbjct: 404 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 463
Query: 649 FEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYG 708
F M +G+ PD +TFV LLS C+H ++ G ++ M Y + P +EHY CM++L G
Sbjct: 464 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 523
Query: 709 RAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFK 768
+GL +EA +I N ME+E +W +LL AC +HGNV++ E AE L + EP+N ++
Sbjct: 524 HSGLFKEAEEMI-NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 583
Query: 769 LLMKIYGNAGRIEDEKRVRLMMAERGL 788
LL IY +AGR + + R ++ ++G+
Sbjct: 584 LLSNIYASAGRWNEVAKTRALLNDKGM 603
BLAST of CmaCh04G003290 vs. Swiss-Prot
Match:
PPR14_ARATH (Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2 SV=1)
HSP 1 Score: 286.2 bits (731), Expect = 1.1e-75
Identity = 165/433 (38.11%), Postives = 245/433 (56.58%), Query Frame = 1
Query: 361 LETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNL 420
++ C L L++GI IH L N L ++ V+ L+ +YA G ME A +VFDE+ RN
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRN- 175
Query: 421 SAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVH 480
+ W L+ GY + + L+ M + G+ D T ++KACG + + +VG+ VH
Sbjct: 176 -SVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVH 235
Query: 481 RHIVRSGFAGDIFVLNA-LVDMYAKCGDIMRARKVFDQIIHKDTVSWNSMLTGYTRHGLL 540
+R F L A ++DMY KC + ARK+F+ + ++ V W ++++G+ +
Sbjct: 236 GVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERA 295
Query: 541 LEALNTFDQMIQEGYEPDSVALSTMI---SNITSSKFKLHIHGWAIRHGIEWNLSIANSL 600
+EA + F QM++E P+ L+ ++ S++ S + +HG+ IR+GIE + S
Sbjct: 296 VEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSF 355
Query: 601 IAMYANSGKINRARWLFEQMPQRDIVSWNTIISAHSNTS---KALTYFEVMESLGVLPDS 660
I MYA G I AR +F+ MP+R+++SW+++I+A +AL F M+S V+P+S
Sbjct: 356 IDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNS 415
Query: 661 VTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIIM 720
VTFVSLLS C+H VKEG K + M YG+ P EHYACMV+L GRAG I EA I
Sbjct: 416 VTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFID 475
Query: 721 NGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIE 780
N M V+ + WGALL AC +H VD+A AEKL EP+ + LL IY +AG E
Sbjct: 476 N-MPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWE 535
Query: 781 DEKRVRLMMAERG 787
VR M +G
Sbjct: 536 MVNCVRRKMGIKG 545
BLAST of CmaCh04G003290 vs. TrEMBL
Match:
A0A061FZF0_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_014953 PE=3 SV=1)
HSP 1 Score: 1008.1 bits (2605), Expect = 6.1e-291
Identity = 503/779 (64.57%), Postives = 612/779 (78.56%), Query Frame = 1
Query: 48 MWRRVASVSHL-TFAQKSIVNKDVCKLKFWEAFSTGIPRKEKGTFQRDKTPFITFVLGGP 107
MWRRVAS+S L + + S + C+L WE+ +TGI ++ KG ++KTPFITFVLGGP
Sbjct: 1 MWRRVASLSSLISSSNSSFHGQAACRLTIWESLTTGIAQQAKGV-SKEKTPFITFVLGGP 60
Query: 108 GSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSELTVKLIQ 167
GSGKGTQC+KIVE FGFTHLSAGD+LR+EI SNSADG MIL+TIKEG+IVPSE+TVKLIQ
Sbjct: 61 GSGKGTQCIKIVETFGFTHLSAGDLLRQEITSNSADGAMILNTIKEGRIVPSEVTVKLIQ 120
Query: 168 KEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNRNQGRVD 227
KEMES+DN+KFLIDGFPRSE+NRIAFE+IIGAEP+IVLFFDCPE+EM+KRVLNRNQGRVD
Sbjct: 121 KEMESNDNHKFLIDGFPRSEENRIAFERIIGAEPNIVLFFDCPEEEMVKRVLNRNQGRVD 180
Query: 228 DNIDTIKKRLKVFSALNLPVVKYYLERGKLYK-----------QQML-------ISLRFS 287
DNIDT++KRLKVF ALNLPV+ YY +RGKLY +Q+L ++ + S
Sbjct: 181 DNIDTVRKRLKVFEALNLPVINYYSQRGKLYTINAVGTVDEIFEQVLPVFTASELTFKIS 240
Query: 288 ISP--------------------ITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEAT 347
I P S L CSS KKS E++K L+ K I SK +T
Sbjct: 241 IPPFLSALLSLTMVALLQPPSFHFVSWTLSCSSKSKKS--EKQKQLKRKQIHQSK---ST 300
Query: 348 RLPFPKSSSTPLLIHHKPFSRSKIQALDAVLNDLEASLDNGVPIDAEIFSSLLETCYQLR 407
LPF KSS TPLLI+HKPF+++K+QALDAV+ DLEAS+ NG+ I +EIFSSLLETCYQL+
Sbjct: 301 ALPFRKSSPTPLLINHKPFTQTKLQALDAVVKDLEASVKNGMNITSEIFSSLLETCYQLK 360
Query: 408 ALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSL 467
++D GI+IH L+P LR+N G+SSKLLRLYAS G++E AHQVFDEM +RN SAF WNSL
Sbjct: 361 SIDQGIKIHNLVPKTLLRKNTGISSKLLRLYASCGHIESAHQVFDEMSKRNESAFPWNSL 420
Query: 468 ISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHIVRSGF 527
ISGYAELG YEDALA+YFQMEEEGVEPD +TFPR LKAC GIG I++GEAVHR +VR GF
Sbjct: 421 ISGYAELGQYEDALAIYFQMEEEGVEPDRYTFPRALKACAGIGLIQIGEAVHRDVVRKGF 480
Query: 528 AGDIFVLNALVDMYAKCGDIMRARKVFDQIIHKDTVSWNSMLTGYTRHGLLLEALNTFDQ 587
D FVLNAL+DMYAKCGDI++AR+VFD I KDTVSWNSMLTGY RHGLL+EAL F
Sbjct: 481 GNDGFVLNALIDMYAKCGDIVKARRVFDNIACKDTVSWNSMLTGYIRHGLLVEALEVFRG 540
Query: 588 MIQEGYEPDSVALSTMISNITSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINR 647
MI+EGYEPD VA+ST++S + S K L IHGW +R G EWNLS+ N+LI +Y+N GK++R
Sbjct: 541 MIREGYEPDPVAMSTILSGVWSLKIALQIHGWILRRGNEWNLSVVNALIVVYSNHGKLDR 600
Query: 648 ARWLFEQMPQRDIVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSL 707
A WLF ++P+ D+VSWN+IIS HS +AL YFE M S G LPDS+TFV++LS CAHL
Sbjct: 601 ASWLFHRIPEPDVVSWNSIISGHSKRPEALVYFEQMVSGGTLPDSITFVAILSACAHLGF 660
Query: 708 VKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIIMNGMEVEAGPTVWGAL 767
V++G +L+S+M+ KY I P +EHYACMVNLYGRAGLI+EA+ +I+ ME EAGPTVWGAL
Sbjct: 661 VRDGEQLFSLMRKKYAINPIMEHYACMVNLYGRAGLIDEAFTLIVERMEFEAGPTVWGAL 720
Query: 768 LYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGL 788
L+AC +HG++D+ E+AA+ LFE EPDNE NF+LL KIY NAGR+ED +RV MM +RGL
Sbjct: 721 LHACSVHGHIDVGEIAAQNLFELEPDNEHNFELLKKIYSNAGRLEDVERVSKMMLDRGL 773
BLAST of CmaCh04G003290 vs. TrEMBL
Match:
A0A0A0L5M0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G176270 PE=4 SV=1)
HSP 1 Score: 899.4 bits (2323), Expect = 3.0e-258
Identity = 439/528 (83.14%), Postives = 484/528 (91.67%), Query Frame = 1
Query: 261 MLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPL 320
MLISL P +SL LFCSS PKKSKKERRKLL +KL+RISKAK++T L FPKSS TPL
Sbjct: 16 MLISLHLLTPPSSSLLLFCSSKPKKSKKERRKLLHQKLLRISKAKQSTDLSFPKSSPTPL 75
Query: 321 LIHHKPFSRSKIQALDAVLNDLEASLDNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLI 380
LIH KPF +SKIQALDAVL DLEAS+DNG+ ID EIFSSLLE CYQL+A+ HGIRIHRLI
Sbjct: 76 LIHPKPFFQSKIQALDAVLTDLEASIDNGLFIDPEIFSSLLELCYQLQAIHHGIRIHRLI 135
Query: 381 PTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYED 440
PTN LRRNVG+SSKLLRLYASFGYMEDAHQVFDEM RN SAF+WNSLISGYAELGLYED
Sbjct: 136 PTNLLRRNVGISSKLLRLYASFGYMEDAHQVFDEMGNRNFSAFAWNSLISGYAELGLYED 195
Query: 441 ALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHIVRSGFAGDIFVLNALVD 500
ALALYFQMEEEGVEPD+FTFPRVLKACGGIGSI++GEAVHRH+VRSGFAGD+FVLNALVD
Sbjct: 196 ALALYFQMEEEGVEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVD 255
Query: 501 MYAKCGDIMRARKVFDQIIHKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVA 560
MY+KCG I+RARKVFDQI +KD VSWNSMLTGYTRHGL EAL+ FDQMIQEGYEPDSVA
Sbjct: 256 MYSKCGCIVRARKVFDQIEYKDIVSWNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVA 315
Query: 561 LSTMISNITSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPQRD 620
LST++SNI+S KFKLHIHGW IRHG+EWNLSIANSLI MYA GK+NRA+WLF+QMPQ+D
Sbjct: 316 LSTLLSNISSMKFKLHIHGWVIRHGVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKD 375
Query: 621 IVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMK 680
+VSWN+IISAH N+++ALTYFEVMESLGV PD VTFVSLLSTCAHL LVKEGGKLY +MK
Sbjct: 376 MVSWNSIISAHFNSAEALTYFEVMESLGVSPDGVTFVSLLSTCAHLGLVKEGGKLYFLMK 435
Query: 681 GKYGIRPTIEHYACMVNLYGRAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLHGNVDI 740
GKYGIRPTIEHYACMVNLYGRAG+IEEAY+II GME+EAGPT+WGALLYACYLH +VDI
Sbjct: 436 GKYGIRPTIEHYACMVNLYGRAGMIEEAYKIITKGMEIEAGPTIWGALLYACYLHSDVDI 495
Query: 741 AEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLD 789
AE+AAE+LFE EPDNELNF+LLMKIYGNAGR EDEKRV+LMMAERGL+
Sbjct: 496 AEIAAERLFELEPDNELNFELLMKIYGNAGRSEDEKRVKLMMAERGLN 543
BLAST of CmaCh04G003290 vs. TrEMBL
Match:
D7MG22_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_354257 PE=3 SV=1)
HSP 1 Score: 890.2 bits (2299), Expect = 1.8e-255
Identity = 446/757 (58.92%), Postives = 570/757 (75.30%), Query Frame = 1
Query: 48 MWRRVASVSHL-TFAQKSIVNKDVCK-LKFWEAFSTGIPRKEKGTFQ-RDKTPFITFVLG 107
MWRRVA +S + + + +S++ K LK E+F+T I + E+ ++K PFITFVLG
Sbjct: 1 MWRRVALLSPMISSSSRSLMLKQAASGLKVGESFATDIIKPEEPVLPPKEKAPFITFVLG 60
Query: 108 GPGSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSELTVKL 167
GPGSGKGTQC KIVE FG HLSAGD+LRREIA ++ +G MIL+ IK+GKIVPSE+TVKL
Sbjct: 61 GPGSGKGTQCEKIVETFGLQHLSAGDLLRREIAMHTENGAMILNLIKDGKIVPSEVTVKL 120
Query: 168 IQKEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNRNQGR 227
IQKE+ESSDN KFLIDGFPR+E+NR+AFE+II A+PD+VLFFDCPE+EM+KRVLNRNQGR
Sbjct: 121 IQKELESSDNRKFLIDGFPRTEENRVAFERIIRADPDVVLFFDCPEEEMVKRVLNRNQGR 180
Query: 228 VDDNIDTIKKRLKVFSALNLPVVKYYLERGKLYKQQMLISLRF---SISPITS----LRL 287
+DDNI T+KKRLK+F+ALN PV+ YY +GKLY + ++ + PI + L+
Sbjct: 181 IDDNITTMKKRLKIFNALNRPVIDYYKNKGKLYTINAVGTVDDIFQHVLPIFNSFEQLKE 240
Query: 288 FCSSGPKKSKKERRKLLQEKLIRISKAKEA-----TRLPFPKSSSTPLLIHHKPFSRSKI 347
PK K + ++ + E T L F K S TPLLI + R+++
Sbjct: 241 SSHVNPKSHLGSSLKPRHHQQLKQHRQNEYNNSGFTSLSFTKPSPTPLLIGKQSIHRTQL 300
Query: 348 QALDAVLNDLEASLDNGVPI-DAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGV 407
+ALD+V+ DLEAS G+ I + EIF+SLLETCY LRA+DHG+R+H LIP LR NVG+
Sbjct: 301 EALDSVITDLEASAQKGISITEPEIFASLLETCYNLRAIDHGVRVHHLIPPYLLRNNVGI 360
Query: 408 SSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEE 467
SSKL+RLYAS GY E AH+VFD M +R S F+WNSLISGYAELG YEDA+ALYFQM E+
Sbjct: 361 SSKLVRLYASCGYAEVAHEVFDRMSKRESSPFAWNSLISGYAELGQYEDAMALYFQMAED 420
Query: 468 GVEPDHFTFPRVLKACGGIGSIRVGEAVHRHIVRSGFAGDIFVLNALVDMYAKCGDIMRA 527
GV+PD FTFPRVLKACGGIGS+++GEA+HR +V++GF D+ VLNALVDMYAKCGDI++A
Sbjct: 421 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKAGFGYDVHVLNALVDMYAKCGDIVKA 480
Query: 528 RKVFDQIIHKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVALSTMISNITSS 587
R VFD I +KD VSWNSMLTGY HGLL EAL+ F M+Q G +PD VA+S++++ + S
Sbjct: 481 RNVFDMIPNKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIDPDKVAISSVLARVLSF 540
Query: 588 KFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPQRDIVSWNTIISAH 647
K +HGW IR G+EW LS+AN+LI +Y+ G++ +A ++F+QM +RD VSWN IISAH
Sbjct: 541 KHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAH 600
Query: 648 SNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEH 707
S S YFE M+ PD +TFVS+LS CA+ +V++G +L+S+M +YGI P +EH
Sbjct: 601 SRDSNGFKYFEQMQHADAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGINPKMEH 660
Query: 708 YACMVNLYGRAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFES 767
YACMVNLYGRAG++EEAY +I+ ME EAGPTVWGALLYACYLHGN DI EV+A++LFE
Sbjct: 661 YACMVNLYGRAGMMEEAYSMIVQEMEFEAGPTVWGALLYACYLHGNTDIGEVSAQRLFEL 720
Query: 768 EPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLD 789
EPDNE NF+LLM+IY A R ED +RVR M+ +RGL+
Sbjct: 721 EPDNEHNFELLMRIYSKAKRAEDVERVRQMLVDRGLE 757
BLAST of CmaCh04G003290 vs. TrEMBL
Match:
A0A0B2RKP9_GLYSO (Pentatricopeptide repeat-containing protein, chloroplastic OS=Glycine soja GN=glysoja_026341 PE=3 SV=1)
HSP 1 Score: 786.9 bits (2031), Expect = 2.2e-224
Identity = 403/696 (57.90%), Postives = 507/696 (72.84%), Query Frame = 1
Query: 97 PFITFVLGGPGSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIV 156
P ITFVLGGPGSGKGTQC KIVE FGF HLSAGD+LRRE+ S+S G+MI++TI+EGKIV
Sbjct: 1187 PLITFVLGGPGSGKGTQCAKIVETFGFKHLSAGDLLRREMVSDSEYGSMIMNTIREGKIV 1246
Query: 157 PSELTVKLIQKEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKR 216
PS +TVKLI +EM+SSDN+KFLIDGFPRS++NRIAFEQIIGAEPD+VLFFDCPE+EM+KR
Sbjct: 1247 PSGVTVKLILREMKSSDNHKFLIDGFPRSQENRIAFEQIIGAEPDMVLFFDCPEEEMVKR 1306
Query: 217 VLNRNQGRVDDNIDTIKKRLKVFSALNLPVVKYYLERGKLYKQQMLISLRFSISPITSL- 276
VL+RNQGR+DDNIDTIK RLKVF +LNLPV+ YY ++GKLY+ I+ + ++
Sbjct: 1307 VLSRNQGRIDDNIDTIKNRLKVFESLNLPVIDYYAKKGKLYR----------INAVGTVD 1366
Query: 277 RLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPLLIHHKPFSRSKIQAL 336
+F P ERR QE+ L FPK STP LIHH+P ++K++AL
Sbjct: 1367 EIFEHVRPVFEACERRLESQER---------RNALSFPKPKSTPFLIHHRPHPKTKLEAL 1426
Query: 337 DAVLNDLEASLDNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKL 396
+ V+ DLEAS++ G+ ID EI++SLLETCY+ A+ HGIR+HRLIPT+ L +N G+SSKL
Sbjct: 1427 EQVIKDLEASVEKGIKIDPEIYASLLETCYRSHAVRHGIRVHRLIPTSLLHKNFGISSKL 1486
Query: 397 LRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEP 456
LRLYAS GY++DAH +FD+M +R+ SAF WNSLISGYA++G Y+DA+ALYFQM EEGV+P
Sbjct: 1487 LRLYASCGYLDDAHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDDAIALYFQMVEEGVDP 1546
Query: 457 DHFTFPRVLKACGGIGSIRVGEAVHRHIVRSGFAGDIFVLNALVDMYAKCGDIMRARKVF 516
D FTFPR+LK C IGS++VGE HRH VR+GFA D FVLNA V+ R +
Sbjct: 1547 DLFTFPRILKVCARIGSVQVGEEGHRHAVRAGFATDGFVLNARVER-------SLIRCLI 1606
Query: 517 DQIIHKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVALSTMISNITSSKFKL 576
+ H+D V WNSMLT Y HG S+ L +
Sbjct: 1607 ETPPHRDPVPWNSMLTAYVHHG------------------GSSLGLG------------V 1666
Query: 577 HIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWL--FEQMPQRDIVSWNTIISAHSN 636
IH W IR G E NLSI NSLI MY+N+G + L F MP+RD+VSWN+IISAH
Sbjct: 1667 QIHRWVIRRGHERNLSIGNSLIMMYSNNGLVKDGERLFSFNLMPERDVVSWNSIISAHCK 1726
Query: 637 TSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYA 696
+AL +FE ME GV PD +TFVS+LS CA+L L+K+G +L+++M GKY I+P +EHY
Sbjct: 1727 RREALAFFEQMEGAGVQPDKITFVSILSACAYLGLLKDGERLFALMCGKYKIKPIMEHYG 1786
Query: 697 CMVNLYGRAGLIEEAYRIIMNGMEVE-AGPTVWGALLYACYLHGNVDIAEVAAEKLFESE 756
CMVNLYGRAGLI++AY II++GM E AGPT+WGALLYAC++HG+ I E+AA +LF+ E
Sbjct: 1787 CMVNLYGRAGLIKKAYSIIVDGMGSEAAGPTLWGALLYACFMHGDATIGEIAANRLFDLE 1826
Query: 757 PDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLD 789
PDNE NF LLM+IY NAGR+ED +RVR+M+ +RGLD
Sbjct: 1847 PDNEHNFVLLMRIYENAGRLEDMERVRMMLVDRGLD 1826
BLAST of CmaCh04G003290 vs. TrEMBL
Match:
M5XGA4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019039mg PE=4 SV=1)
HSP 1 Score: 726.9 bits (1875), Expect = 2.7e-206
Identity = 350/511 (68.49%), Postives = 425/511 (83.17%), Query Frame = 1
Query: 279 CSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPLLIHHKPFSRSKIQALDAV 338
CSS KK+KK+++ +S+ + L FPK+ TPL+I HKP S++K+QALDAV
Sbjct: 18 CSSKSKKNKKQKQ---------VSQNQSNNSLSFPKTIPTPLIICHKPHSQTKLQALDAV 77
Query: 339 LNDLEASLDNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRL 398
+NDLEA++ G+ +D E F+SLLETCYQ +A+D+G+R+HRLIP + LRRNVG+SSKLLRL
Sbjct: 78 VNDLEAAIGKGINVDTETFASLLETCYQFQAMDYGLRVHRLIPRSVLRRNVGISSKLLRL 137
Query: 399 YASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHF 458
YAS GY+E+AHQVFDEM +R++SAF+WNSLISGYAELGLYEDA+ALYFQMEEEGVEPD F
Sbjct: 138 YASHGYIEEAHQVFDEMPKRDVSAFAWNSLISGYAELGLYEDAMALYFQMEEEGVEPDRF 197
Query: 459 TFPRVLKACGGIGSIRVGEAVHRHIVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQI 518
TFPRVLKACGGIG I++GEAVHRHIVR G D FVLNALVDMYAKCGDI++ARKVFD+I
Sbjct: 198 TFPRVLKACGGIGFIQIGEAVHRHIVRLGLLNDRFVLNALVDMYAKCGDIVKARKVFDKI 257
Query: 519 IHKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVALSTMISNITSS-KFKLHI 578
+D VSWN+MLT Y RHGLL +AL+ F +M+ EG++ DSVA+ST++ SS + + I
Sbjct: 258 TSRDHVSWNTMLTSYMRHGLLSQALDIFHEMLHEGHQADSVAISTILGAAESSLEIVIQI 317
Query: 579 HGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPQRDIVSWNTIISAHSNTSKA 638
HGW IR G+EWNLSIAN+LIA Y+N K+NRARWLF M +RD+++WNT+ISAHS + +A
Sbjct: 318 HGWVIRQGVEWNLSIANALIAAYSNHRKLNRARWLFCHMSERDVITWNTMISAHSKSPEA 377
Query: 639 LTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVN 698
L +FE MES G LPDS+TFVS+LSTCAHL LVK+G +LYSVMK +Y I P +EHYACMVN
Sbjct: 378 LLFFEQMESSGALPDSITFVSILSTCAHLGLVKDGERLYSVMKNRYRISPIMEHYACMVN 437
Query: 699 LYGRAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNEL 758
LYGRAG I EAY II++GME EAGPTVWGALLYACYLHGNVDI EVAAE+LFE EPDNE
Sbjct: 438 LYGRAGRIREAYGIIVDGMEFEAGPTVWGALLYACYLHGNVDIGEVAAERLFELEPDNEY 497
Query: 759 NFKLLMKIYGNAGRIEDEKRVRLMMAERGLD 789
NF+LL+KIYGN GR+ED +RVRLMM ERGLD
Sbjct: 498 NFELLIKIYGNVGRLEDVERVRLMMVERGLD 519
BLAST of CmaCh04G003290 vs. TAIR10
Match:
AT4G25270.1 (AT4G25270.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 629.8 bits (1623), Expect = 2.3e-180
Identity = 303/510 (59.41%), Postives = 388/510 (76.08%), Query Frame = 1
Query: 280 SSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSSTPLLIHHKPFSRSKIQALDAVL 339
SS KK + ++L Q + + + T L F K S TPLLI + R++++ALD+V+
Sbjct: 18 SSSMKKKPRHHQQLKQHRQNQYNN-NGFTSLSFTKPSPTPLLIEKQSIHRTQLEALDSVI 77
Query: 340 NDLEASLDNGVPI-DAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRL 399
DLE S G+ + + EIF+SLLETCY LRA+DHG+R+H LIP LR N+G+SSKL+RL
Sbjct: 78 TDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRL 137
Query: 400 YASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHF 459
YAS GY E AH+VFD M +R+ S F+WNSLISGYAELG YEDA+ALYFQM E+GV+PD F
Sbjct: 138 YASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRF 197
Query: 460 TFPRVLKACGGIGSIRVGEAVHRHIVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQI 519
TFPRVLKACGGIGS+++GEA+HR +V+ GF D++VLNALV MYAKCGDI++AR VFD I
Sbjct: 198 TFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMI 257
Query: 520 IHKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVALSTMISNITSSKFKLHIH 579
HKD VSWNSMLTGY HGLL EAL+ F M+Q G EPD VA+S++++ + S K +H
Sbjct: 258 PHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLH 317
Query: 580 GWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPQRDIVSWNTIISAHSNTSKAL 639
GW IR G+EW LS+AN+LI +Y+ G++ +A ++F+QM +RD VSWN IISAHS S L
Sbjct: 318 GWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGL 377
Query: 640 TYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNL 699
YFE M PD +TFVS+LS CA+ +V++G +L+S+M +YGI P +EHYACMVNL
Sbjct: 378 KYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNL 437
Query: 700 YGRAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELN 759
YGRAG++EEAY +I+ M +EAGPTVWGALLYACYLHGN DI EVAA++LFE EPDNE N
Sbjct: 438 YGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHN 497
Query: 760 FKLLMKIYGNAGRIEDEKRVRLMMAERGLD 789
F+LL++IY A R ED +RVR MM +RGL+
Sbjct: 498 FELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
BLAST of CmaCh04G003290 vs. TAIR10
Match:
AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 299.7 bits (766), Expect = 5.4e-81
Identity = 163/449 (36.30%), Postives = 256/449 (57.02%), Query Frame = 1
Query: 346 LDNGVPIDAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYM 405
L +G+ ID S+ C R + G +H + R + LL +Y+ G +
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 406 EDAHQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLK 465
+ A VF EM R S S+ S+I+GYA GL +A+ L+ +MEEEG+ PD +T VL
Sbjct: 348 DSAKAVFREMSDR--SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 407
Query: 466 ACGGIGSIRVGEAVHRHIVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIIHKDTVS 525
C + G+ VH I + DIFV NAL+DMYAKCG + A VF ++ KD +S
Sbjct: 408 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 467
Query: 526 WNSMLTGYTRHGLLLEALNTFDQMIQE-GYEPDSVALSTMI---SNITSSKFKLHIHGWA 585
WN+++ GY+++ EAL+ F+ +++E + PD ++ ++ +++++ IHG+
Sbjct: 468 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 527
Query: 586 IRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPQRDIVSWNTIISA---HSNTSKAL 645
+R+G + +ANSL+ MYA G + A LF+ + +D+VSW +I+ H +A+
Sbjct: 528 MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAI 587
Query: 646 TYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNL 705
F M G+ D ++FVSLL C+H LV EG + +++M+ + I PT+EHYAC+V++
Sbjct: 588 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 647
Query: 706 YGRAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELN 765
R G + +AYR I N M + T+WGALL C +H +V +AE AEK+FE EP+N
Sbjct: 648 LARTGDLIKAYRFIEN-MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 707
Query: 766 FKLLMKIYGNAGRIEDEKRVRLMMAERGL 788
+ L+ IY A + E KR+R + +RGL
Sbjct: 708 YVLMANIYAEAEKWEQVKRLRKRIGQRGL 733
BLAST of CmaCh04G003290 vs. TAIR10
Match:
AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 291.2 bits (744), Expect = 1.9e-78
Identity = 155/447 (34.68%), Postives = 256/447 (57.27%), Query Frame = 1
Query: 349 GVPIDAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDA 408
G +D + +SL+ Q L+ ++ P R+V + L++ YAS GY+E+A
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP----HRDVVSYTALIKGYASRGYIENA 223
Query: 409 HQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACG 468
++FDE+ +++ SWN++ISGYAE G Y++AL L+ M + V PD T V+ AC
Sbjct: 224 QKLFDEIPVKDV--VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 283
Query: 469 GIGSIRVGEAVHRHIVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIIHKDTVSWNS 528
GSI +G VH I GF ++ ++NAL+D+Y+KCG++ A +F+++ +KD +SWN+
Sbjct: 284 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 343
Query: 529 MLTGYTRHGLLLEALNTFDQMIQEGYEPDSVALSTMI---SNITSSKFKLHIHGWAIRH- 588
++ GYT L EAL F +M++ G P+ V + +++ +++ + IH + +
Sbjct: 344 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 403
Query: 589 -GIEWNLSIANSLIAMYANSGKINRARWLFEQMPQRDIVSWNTII---SAHSNTSKALTY 648
G+ S+ SLI MYA G I A +F + + + SWN +I + H +
Sbjct: 404 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 463
Query: 649 FEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYG 708
F M +G+ PD +TFV LLS C+H ++ G ++ M Y + P +EHY CM++L G
Sbjct: 464 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 523
Query: 709 RAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFK 768
+GL +EA +I N ME+E +W +LL AC +HGNV++ E AE L + EP+N ++
Sbjct: 524 HSGLFKEAEEMI-NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 583
Query: 769 LLMKIYGNAGRIEDEKRVRLMMAERGL 788
LL IY +AGR + + R ++ ++G+
Sbjct: 584 LLSNIYASAGRWNEVAKTRALLNDKGM 603
BLAST of CmaCh04G003290 vs. TAIR10
Match:
AT1G06140.1 (AT1G06140.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 286.2 bits (731), Expect = 6.2e-77
Identity = 165/433 (38.11%), Postives = 245/433 (56.58%), Query Frame = 1
Query: 361 LETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNL 420
++ C L L++GI IH L N L ++ V+ L+ +YA G ME A +VFDE+ RN
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRN- 175
Query: 421 SAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVH 480
+ W L+ GY + + L+ M + G+ D T ++KACG + + +VG+ VH
Sbjct: 176 -SVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVH 235
Query: 481 RHIVRSGFAGDIFVLNA-LVDMYAKCGDIMRARKVFDQIIHKDTVSWNSMLTGYTRHGLL 540
+R F L A ++DMY KC + ARK+F+ + ++ V W ++++G+ +
Sbjct: 236 GVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERA 295
Query: 541 LEALNTFDQMIQEGYEPDSVALSTMI---SNITSSKFKLHIHGWAIRHGIEWNLSIANSL 600
+EA + F QM++E P+ L+ ++ S++ S + +HG+ IR+GIE + S
Sbjct: 296 VEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSF 355
Query: 601 IAMYANSGKINRARWLFEQMPQRDIVSWNTIISAHSNTS---KALTYFEVMESLGVLPDS 660
I MYA G I AR +F+ MP+R+++SW+++I+A +AL F M+S V+P+S
Sbjct: 356 IDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNS 415
Query: 661 VTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIIM 720
VTFVSLLS C+H VKEG K + M YG+ P EHYACMV+L GRAG I EA I
Sbjct: 416 VTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFID 475
Query: 721 NGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIE 780
N M V+ + WGALL AC +H VD+A AEKL EP+ + LL IY +AG E
Sbjct: 476 N-MPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWE 535
Query: 781 DEKRVRLMMAERG 787
VR M +G
Sbjct: 536 MVNCVRRKMGIKG 545
BLAST of CmaCh04G003290 vs. TAIR10
Match:
AT3G08820.1 (AT3G08820.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 285.8 bits (730), Expect = 8.1e-77
Identity = 155/447 (34.68%), Postives = 248/447 (55.48%), Query Frame = 1
Query: 348 NGVPIDAEIFSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMED 407
+G+ + F +L+ C + + GI +H L+ +V + LL +Y+ G + D
Sbjct: 105 HGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLND 164
Query: 408 AHQVFDEMCQRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKAC 467
AH++FDE+ R S +W +L SGY G + +A+ L+ +M E GV+PD + +VL AC
Sbjct: 165 AHKLFDEIPDR--SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 224
Query: 468 GGIGSIRVGEAVHRHIVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIIHKDTVSWN 527
+G + GE + +++ + FV LV++YAKCG + +AR VFD ++ KD V+W+
Sbjct: 225 VHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWS 284
Query: 528 SMLTGYTRHGLLLEALNTFDQMIQEGYEPDSVALSTMISNITSSKFKLHIHGWAI----R 587
+M+ GY + E + F QM+QE +PD ++ +S+ S L + W I R
Sbjct: 285 TMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG-ALDLGEWGISLIDR 344
Query: 588 HGIEWNLSIANSLIAMYANSGKINRARWLFEQMPQRDIVSWNTIISAHSNTSKALTYFEV 647
H NL +AN+LI MYA G + R +F++M ++DIV N IS + F V
Sbjct: 345 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 404
Query: 648 M---ESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYG 707
E LG+ PD TF+ LL C H L+++G + ++ + Y ++ T+EHY CMV+L+G
Sbjct: 405 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWG 464
Query: 708 RAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFK 767
RAG++++AYR+I + M + VWGALL C L + +AE ++L EP N N+
Sbjct: 465 RAGMLDDAYRLICD-MPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYV 524
Query: 768 LLMKIYGNAGRIEDEKRVRLMMAERGL 788
L IY GR ++ VR MM ++G+
Sbjct: 525 QLSNIYSVGGRWDEAAEVRDMMNKKGM 547
BLAST of CmaCh04G003290 vs. NCBI nr
Match:
gi|778688525|ref|XP_011652769.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g25270, chloroplastic [Cucumis sativus])
HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 582/792 (73.48%), Postives = 649/792 (81.94%), Query Frame = 1
Query: 48 MWRRVASVSHLTFAQKSIV-NKDVCKLKFWEAFSTGIPRKEKGTFQRDKTPFITFVLGGP 107
MWRR SVSH TFA KSI NKDVCKLKFWE F+T P KEKGTFQRDKTPFITFVLGGP
Sbjct: 1 MWRRAVSVSHFTFAHKSIAHNKDVCKLKFWETFTTETPMKEKGTFQRDKTPFITFVLGGP 60
Query: 108 GSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSELTVKLIQ 167
GSGKGTQCMKIVENFGFTHLSAGD+LRREIASNSADGTMIL+TIKEGKIVPSELTV+LIQ
Sbjct: 61 GSGKGTQCMKIVENFGFTHLSAGDLLRREIASNSADGTMILNTIKEGKIVPSELTVRLIQ 120
Query: 168 KEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNRNQGRVD 227
KEMESSDNYKFLIDGFPRSE+NRIAFEQI+G EPD+VLFFDCPEDEM+KRVLNRNQGRVD
Sbjct: 121 KEMESSDNYKFLIDGFPRSEENRIAFEQIMGVEPDVVLFFDCPEDEMVKRVLNRNQGRVD 180
Query: 228 DNIDTIKKRLKVFSALNLPVVKYYLERGKLYKQQMLISLR---------FSISPITSLRL 287
DNI TIKKRLKVF ALNLPVVKYY+E+GKLYK + + S+ F+ +R
Sbjct: 181 DNIVTIKKRLKVFDALNLPVVKYYMEKGKLYKIRAVGSVDEIYKQVYPVFASLNFEQVRE 240
Query: 288 FCSSGPKKSKKERRKLLQEKLI-------RISKAKEATRLPF----PKSSSTP--LLIHH 347
++ K + LL ++ + + ++ L F PK S L+H
Sbjct: 241 LWAARTKPQMNDHFPLLLQRFVFPMLISLHLLTPPSSSLLLFCSSKPKKSKKERRKLLHQ 300
Query: 348 KPFSRSKIQA---------------------LDAVLNDLEASLD-------NGVPIDAEI 407
K SK + + + L+A L NG+ ID EI
Sbjct: 301 KLLRISKAKQSTDLSFPKSSPTPLLIHPKPFFQSKIQALDAVLTDLEASIDNGLFIDPEI 360
Query: 408 FSSLLETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMC 467
FSSLLE CYQL+A+ HGIRIHRLIPTN LRRNVG+SSKLLRLYASFGYMEDAHQVFDEM
Sbjct: 361 FSSLLELCYQLQAIHHGIRIHRLIPTNLLRRNVGISSKLLRLYASFGYMEDAHQVFDEMG 420
Query: 468 QRNLSAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVG 527
RN SAF+WNSLISGYAELGLYEDALALYFQMEEEGVEPD+FTFPRVLKACGGIGSI++G
Sbjct: 421 NRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKACGGIGSIQIG 480
Query: 528 EAVHRHIVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIIHKDTVSWNSMLTGYTRH 587
EAVHRH+VRSGFAGD+FVLNALVDMY+KCG I+RARKVFDQI +KD VSWNSMLTGYTRH
Sbjct: 481 EAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIVSWNSMLTGYTRH 540
Query: 588 GLLLEALNTFDQMIQEGYEPDSVALSTMISNITSSKFKLHIHGWAIRHGIEWNLSIANSL 647
GL EAL+ FDQMIQEGYEPDSVALST++SNI+S KFKLHIHGW IRHG+EWNLSIANSL
Sbjct: 541 GLHFEALDIFDQMIQEGYEPDSVALSTLLSNISSMKFKLHIHGWVIRHGVEWNLSIANSL 600
Query: 648 IAMYANSGKINRARWLFEQMPQRDIVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTF 707
I MYA GK+NRA+WLF+QMPQ+D+VSWN+IISAH N+++ALTYFEVMESLGV PD VTF
Sbjct: 601 IVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIISAHFNSAEALTYFEVMESLGVSPDGVTF 660
Query: 708 VSLLSTCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIIMNGM 767
VSLLSTCAHL LVKEGGKLY +MKGKYGIRPTIEHYACMVNLYGRAG+IEEAY+II GM
Sbjct: 661 VSLLSTCAHLGLVKEGGKLYFLMKGKYGIRPTIEHYACMVNLYGRAGMIEEAYKIITKGM 720
Query: 768 EVEAGPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEK 789
E+EAGPT+WGALLYACYLH +VDIAE+AAE+LFE EPDNELNF+LLMKIYGNAGR EDEK
Sbjct: 721 EIEAGPTIWGALLYACYLHSDVDIAEIAAERLFELEPDNELNFELLMKIYGNAGRSEDEK 780
BLAST of CmaCh04G003290 vs. NCBI nr
Match:
gi|590671772|ref|XP_007038424.1| (Tetratricopeptide repeat-like superfamily protein [Theobroma cacao])
HSP 1 Score: 1008.1 bits (2605), Expect = 8.7e-291
Identity = 503/779 (64.57%), Postives = 612/779 (78.56%), Query Frame = 1
Query: 48 MWRRVASVSHL-TFAQKSIVNKDVCKLKFWEAFSTGIPRKEKGTFQRDKTPFITFVLGGP 107
MWRRVAS+S L + + S + C+L WE+ +TGI ++ KG ++KTPFITFVLGGP
Sbjct: 1 MWRRVASLSSLISSSNSSFHGQAACRLTIWESLTTGIAQQAKGV-SKEKTPFITFVLGGP 60
Query: 108 GSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSELTVKLIQ 167
GSGKGTQC+KIVE FGFTHLSAGD+LR+EI SNSADG MIL+TIKEG+IVPSE+TVKLIQ
Sbjct: 61 GSGKGTQCIKIVETFGFTHLSAGDLLRQEITSNSADGAMILNTIKEGRIVPSEVTVKLIQ 120
Query: 168 KEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNRNQGRVD 227
KEMES+DN+KFLIDGFPRSE+NRIAFE+IIGAEP+IVLFFDCPE+EM+KRVLNRNQGRVD
Sbjct: 121 KEMESNDNHKFLIDGFPRSEENRIAFERIIGAEPNIVLFFDCPEEEMVKRVLNRNQGRVD 180
Query: 228 DNIDTIKKRLKVFSALNLPVVKYYLERGKLYK-----------QQML-------ISLRFS 287
DNIDT++KRLKVF ALNLPV+ YY +RGKLY +Q+L ++ + S
Sbjct: 181 DNIDTVRKRLKVFEALNLPVINYYSQRGKLYTINAVGTVDEIFEQVLPVFTASELTFKIS 240
Query: 288 ISP--------------------ITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEAT 347
I P S L CSS KKS E++K L+ K I SK +T
Sbjct: 241 IPPFLSALLSLTMVALLQPPSFHFVSWTLSCSSKSKKS--EKQKQLKRKQIHQSK---ST 300
Query: 348 RLPFPKSSSTPLLIHHKPFSRSKIQALDAVLNDLEASLDNGVPIDAEIFSSLLETCYQLR 407
LPF KSS TPLLI+HKPF+++K+QALDAV+ DLEAS+ NG+ I +EIFSSLLETCYQL+
Sbjct: 301 ALPFRKSSPTPLLINHKPFTQTKLQALDAVVKDLEASVKNGMNITSEIFSSLLETCYQLK 360
Query: 408 ALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSL 467
++D GI+IH L+P LR+N G+SSKLLRLYAS G++E AHQVFDEM +RN SAF WNSL
Sbjct: 361 SIDQGIKIHNLVPKTLLRKNTGISSKLLRLYASCGHIESAHQVFDEMSKRNESAFPWNSL 420
Query: 468 ISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHIVRSGF 527
ISGYAELG YEDALA+YFQMEEEGVEPD +TFPR LKAC GIG I++GEAVHR +VR GF
Sbjct: 421 ISGYAELGQYEDALAIYFQMEEEGVEPDRYTFPRALKACAGIGLIQIGEAVHRDVVRKGF 480
Query: 528 AGDIFVLNALVDMYAKCGDIMRARKVFDQIIHKDTVSWNSMLTGYTRHGLLLEALNTFDQ 587
D FVLNAL+DMYAKCGDI++AR+VFD I KDTVSWNSMLTGY RHGLL+EAL F
Sbjct: 481 GNDGFVLNALIDMYAKCGDIVKARRVFDNIACKDTVSWNSMLTGYIRHGLLVEALEVFRG 540
Query: 588 MIQEGYEPDSVALSTMISNITSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINR 647
MI+EGYEPD VA+ST++S + S K L IHGW +R G EWNLS+ N+LI +Y+N GK++R
Sbjct: 541 MIREGYEPDPVAMSTILSGVWSLKIALQIHGWILRRGNEWNLSVVNALIVVYSNHGKLDR 600
Query: 648 ARWLFEQMPQRDIVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSL 707
A WLF ++P+ D+VSWN+IIS HS +AL YFE M S G LPDS+TFV++LS CAHL
Sbjct: 601 ASWLFHRIPEPDVVSWNSIISGHSKRPEALVYFEQMVSGGTLPDSITFVAILSACAHLGF 660
Query: 708 VKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIIMNGMEVEAGPTVWGAL 767
V++G +L+S+M+ KY I P +EHYACMVNLYGRAGLI+EA+ +I+ ME EAGPTVWGAL
Sbjct: 661 VRDGEQLFSLMRKKYAINPIMEHYACMVNLYGRAGLIDEAFTLIVERMEFEAGPTVWGAL 720
Query: 768 LYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGL 788
L+AC +HG++D+ E+AA+ LFE EPDNE NF+LL KIY NAGR+ED +RV MM +RGL
Sbjct: 721 LHACSVHGHIDVGEIAAQNLFELEPDNEHNFELLKKIYSNAGRLEDVERVSKMMLDRGL 773
BLAST of CmaCh04G003290 vs. NCBI nr
Match:
gi|657945057|ref|XP_008377840.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g25270, chloroplastic [Malus domestica])
HSP 1 Score: 979.2 bits (2530), Expect = 4.3e-282
Identity = 491/770 (63.77%), Postives = 599/770 (77.79%), Query Frame = 1
Query: 48 MWRRVASVSHLTFAQK-SIVNKDVCKLKFWEAFSTG--IPRKEKGTFQRDKTPFITFVLG 107
MWRRVAS+S L K S ++++ C K WE+FS+ +P K PFITFVLG
Sbjct: 1 MWRRVASLSPLVSRSKPSKLSQEACTFKIWESFSSESQVPTPSK------VAPFITFVLG 60
Query: 108 GPGSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSELTVKL 167
GPGSGKGTQC KIVE FGFTH+SAGD+LRREIASNSA G++IL TI+EGKIVPS++TV+L
Sbjct: 61 GPGSGKGTQCAKIVEEFGFTHISAGDLLRREIASNSAYGSVILSTIREGKIVPSQVTVQL 120
Query: 168 IQKEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNRNQGR 227
I+KEMESSDN KFLIDGFPRSE+NR AFEQIIG EP++VLFFDCPE EM+KRVLNRNQGR
Sbjct: 121 IRKEMESSDNDKFLIDGFPRSEENREAFEQIIGREPNVVLFFDCPEREMVKRVLNRNQGR 180
Query: 228 VDDNIDTIKKRLKVFSALNLPVVKYYLERGKLYK-------------------------- 287
VDDNIDTIKKRL++F LN PV+ +Y GKL+K
Sbjct: 181 VDDNIDTIKKRLEIFDELNWPVINHYSMTGKLHKINAVGTVDDIFEKVRPIFAALRANES 240
Query: 288 QQMLISLRFSISPITSLRLFCSSGPKKSKKERRKLLQEKLIRISKAKEATRLPFPKSSST 347
Q +++ +S T+ C+S K K++++L Q + L FPKS+ T
Sbjct: 241 FQKMVTTFQPLSFHTAKLSVCTSSKSKKNKKQKQLHQN--------QNTNSLSFPKSTPT 300
Query: 348 PLLIHHKPFSRSKIQALDAVLNDLEASLDNGVPIDAEIFSSLLETCYQLRALDHGIRIHR 407
PL+I+HKP +++K+QALDAV+ DLEAS+D GV +D + F+SLLE CYQL A+ + R+H+
Sbjct: 301 PLIIYHKPSAQTKLQALDAVVKDLEASVDKGVNVDTQTFASLLEICYQLEAMKYCHRVHK 360
Query: 408 LIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAELGLY 467
LIP + LRRNVG+SSKLLRLYA+ G ME+AH+VFDEM +R+ SAF+WN+LISGYAELGLY
Sbjct: 361 LIPRSLLRRNVGLSSKLLRLYAASGRMEEAHKVFDEMPKRDASAFAWNALISGYAELGLY 420
Query: 468 EDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHIVRSGFAGDIFVLNAL 527
EDA+ALYFQMEEEGVEPD FTFPRVLKACGGIG I++GEAVHRH+VRSG D FVLNAL
Sbjct: 421 EDAMALYFQMEEEGVEPDRFTFPRVLKACGGIGFIQIGEAVHRHVVRSGLLNDRFVLNAL 480
Query: 528 VDMYAKCGDIMRARKVFDQIIHKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYEPDS 587
VDMYAKCGDI++ARKVFD+I +D VSWN+MLT Y RHG+LL+AL+ F QM EGY+PDS
Sbjct: 481 VDMYAKCGDIVKARKVFDKISSRDKVSWNTMLTSYMRHGVLLQALDIFRQMFDEGYQPDS 540
Query: 588 VALSTMISNITSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQMPQ 647
V++ST+++ + S + + IHGW IR G+EWNLSIAN+LIA Y+ ++NRARWLF MP+
Sbjct: 541 VSISTILAAVQSLQLVVQIHGWVIRMGVEWNLSIANALIAAYSKHHELNRARWLFSHMPE 600
Query: 648 RDIVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKLYSV 707
RD+V+WNTIISAHS + +AL YF+ ME G LPDS+TFVS+LS CA+L LVK+G +LYSV
Sbjct: 601 RDVVTWNTIISAHSKSREALLYFDQMEKDGALPDSITFVSILSACANLGLVKDGQRLYSV 660
Query: 708 MKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLHGNV 767
MK +Y I P +EHYACMVNLYGR+G I+EAY II +GME EAGPTVWGALLYACYLH NV
Sbjct: 661 MKNRYRISPIMEHYACMVNLYGRSGRIKEAYGIITDGMEFEAGPTVWGALLYACYLHSNV 720
Query: 768 DIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGLD 789
DI EVAAEKLF+ EPDNE NF+LLM IYGN GR+ED +RVRLMM ERGLD
Sbjct: 721 DIGEVAAEKLFDLEPDNEYNFELLMMIYGNVGRLEDVERVRLMMMERGLD 756
BLAST of CmaCh04G003290 vs. NCBI nr
Match:
gi|1009123035|ref|XP_015878328.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g25270, chloroplastic [Ziziphus jujuba])
HSP 1 Score: 969.1 bits (2504), Expect = 4.5e-279
Identity = 494/789 (62.61%), Postives = 605/789 (76.68%), Query Frame = 1
Query: 48 MWRRVASVSHLTFAQKSIV--NKDVCKLKFWEAFSTGIPRKEKGTFQRDKTPFITFVLGG 107
MWRRVA S L + K + N+ C KF E F T I KEK PFITFVLGG
Sbjct: 1 MWRRVALHSQLMLSSKPSIFNNQGACIFKFCETFKTEIATKEK--------PFITFVLGG 60
Query: 108 PGSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSELTVKLI 167
PGSGKGTQC +IVE FG THLSAGD+LRREIASNSADG+ IL TIKEGKIVPSE+T+KL+
Sbjct: 61 PGSGKGTQCARIVETFGLTHLSAGDLLRREIASNSADGSTILSTIKEGKIVPSEITIKLL 120
Query: 168 QKEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNRNQGRV 227
QKEME+ D+ KFLIDGFPR E+NRIAFEQIIGAEP+IVLFFDCPE+EM+KRVLNRNQGRV
Sbjct: 121 QKEMETCDSSKFLIDGFPRCEENRIAFEQIIGAEPNIVLFFDCPEEEMVKRVLNRNQGRV 180
Query: 228 DDNIDTIKKRL------------------------------KVFSALN-----LPVVKYY 287
DDNIDTIKKRL ++F ++ +KYY
Sbjct: 181 DDNIDTIKKRLKVFEALNRPVINYYSDKGKLYKINAVGTEDEIFKQVHPIFAVYEAIKYY 240
Query: 288 LER-GKLYKQQMLISL--RFSISPI--TSLRLFCSSGPKKSKK---ERRKLLQEKLIRIS 347
G + Q ++ +F + T+L C K + + E +K ++K IR++
Sbjct: 241 KGLVGYIQASQGVVKFLQQFPCENMVATTLPPLCFHTTKVAVRYSTESKKNEKQKQIRLN 300
Query: 348 KAKE--ATRLPFPKSSSTPLLIHHKPFSRSKIQALDAVLNDLEASLDNGVPIDAEIFSSL 407
K K A+ + F K S TPLL+ + S++K++ALD V+ D+EA +DNG+ +D EIFSSL
Sbjct: 301 KNKNNNASAVSFLKPSPTPLLLIKQKPSQTKLEALDVVVKDIEALVDNGIDVDVEIFSSL 360
Query: 408 LETCYQLRALDHGIRIHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNL 467
LETCY+L+A+ +G+RIHRLIP N LR+NVG+SSKL+RLYA+ GY++ AH+VFD+M +R+
Sbjct: 361 LETCYRLQAIQYGVRIHRLIPANLLRKNVGLSSKLVRLYAACGYVDKAHEVFDQMSKRDS 420
Query: 468 SAFSWNSLISGYAELGLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVH 527
SAF+WNSLISG+AELGLYEDALALYFQMEEEGVEPD +TFPRVLKAC G+G I++G AVH
Sbjct: 421 SAFAWNSLISGHAELGLYEDALALYFQMEEEGVEPDRYTFPRVLKACAGVGFIQIGVAVH 480
Query: 528 RHIVRSGFAGDIFVLNALVDMYAKCGDIMRARKVFDQIIHKDTVSWNSMLTGYTRHGLLL 587
RHIVRSGF D FVLNALVDMYAKCGDI++ARKVFD+I D VSWNSMLTGYTRHGL+L
Sbjct: 481 RHIVRSGFLDDGFVLNALVDMYAKCGDIVKARKVFDKIASPDLVSWNSMLTGYTRHGLVL 540
Query: 588 EALNTFDQMIQEGYEPDSVALSTMISNITSSKFKLHIHGWAIRHGIEWNLSIANSLIAMY 647
EAL+ F QM+Q+GY+PDS+A+S ++S +TS K + IHGWA+RHG+EWNLSIANSLI MY
Sbjct: 541 EALDLFCQMLQQGYQPDSIAISAILSGVTSLKLGVQIHGWAVRHGVEWNLSIANSLIVMY 600
Query: 648 ANSGKINRARWLFEQMPQRDIVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLL 707
+ GK+ +ARWLFE MP+RDIVSWN+IISAHS +AL +FE ME GVLPD++TFVSLL
Sbjct: 601 SCHGKLVQARWLFENMPERDIVSWNSIISAHSKEPEALIFFEQMEKAGVLPDNITFVSLL 660
Query: 708 STCAHLSLVKEGGKLYSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIIMNGMEVEA 767
S CAHL LVKEG +L+S+M+ +YG+ +EHY CMVNLYGRAGLIEEAY +I+ GME+EA
Sbjct: 661 SACAHLGLVKEGERLFSIMRNRYGMSSIMEHYGCMVNLYGRAGLIEEAYHLIVEGMEIEA 720
Query: 768 GPTVWGALLYACYLHGNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRL 790
GPTVWGALLYAC LHGNV++ EVAAE+LFE EPDNE N++LLMKIYGNAGR+ED K V++
Sbjct: 721 GPTVWGALLYACCLHGNVEVGEVAAERLFELEPDNEHNYELLMKIYGNAGRVEDVKTVKM 780
BLAST of CmaCh04G003290 vs. NCBI nr
Match:
gi|823212827|ref|XP_012439159.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g25270, chloroplastic [Gossypium raimondii])
HSP 1 Score: 962.6 bits (2487), Expect = 4.2e-277
Identity = 477/772 (61.79%), Postives = 591/772 (76.55%), Query Frame = 1
Query: 48 MWRRVASVSHLTFAQKSIVNKDVCKLKFWEAFSTGIPRKEKGTFQ-RDKTPFITFVLGGP 107
MWRRVAS+S + S + + +L WE+ +TGI ++ KG ++KTPFITFVLGGP
Sbjct: 1 MWRRVASLS--SSVSSSFLAQTASRLNTWESLTTGIAQQAKGVIAPKEKTPFITFVLGGP 60
Query: 108 GSGKGTQCMKIVENFGFTHLSAGDILRREIASNSADGTMILDTIKEGKIVPSELTVKLIQ 167
GSGKGTQC+KIVE FGF HLSAGD+LRREIAS SADG MIL+TIKEGKIVPS++TVKLIQ
Sbjct: 61 GSGKGTQCIKIVETFGFAHLSAGDLLRREIASKSADGAMILNTIKEGKIVPSQVTVKLIQ 120
Query: 168 KEMESSDNYKFLIDGFPRSEDNRIAFEQIIGAEPDIVLFFDCPEDEMMKRVLNRNQGRVD 227
KEME S N+KFLIDGFPR+E+NR++FE+IIG EP++VLFFDCPE+EM+KRVLNRN+GRVD
Sbjct: 121 KEMELSYNHKFLIDGFPRTEENRVSFERIIGVEPNVVLFFDCPEEEMVKRVLNRNEGRVD 180
Query: 228 DNIDTIKKRLKVFSALNLPVVKYYLERGKLY-------KQQMLISLR--FSISPITSLRL 287
DN++TIKKRL VF AL+LPV+ YY E+GKLY + ++ +R F+ + S+
Sbjct: 181 DNLETIKKRLTVFQALSLPVINYYSEKGKLYTIKAIGTEDEIFEQVRPIFAAFEVCSVSA 240
Query: 288 FCSSGPKKSKKERRKLLQEKLIRI-------SKAKE---------------ATRLPFPKS 347
SG + K Q I + SK K+ A LPFP+S
Sbjct: 241 MILSGLRSLKMVALLQAQPHAIPLTLHFHCSSKGKKNQKQKRRQFEHNKNTAPALPFPRS 300
Query: 348 SSTPLLIHHKPFSRSKIQALDAVLNDLEASLDNGVPIDAEIFSSLLETCYQLRALDHGIR 407
S TPL I++KPF ++K+QA+D+++ DLEAS+ G+ ID+EIFSSLLETCYQL+++DHGI
Sbjct: 301 SPTPLFINNKPFPQTKLQAVDSIVKDLEASVKKGIIIDSEIFSSLLETCYQLKSIDHGIA 360
Query: 408 IHRLIPTNFLRRNVGVSSKLLRLYASFGYMEDAHQVFDEMCQRNLSAFSWNSLISGYAEL 467
IHRL+P N LR+N G+SSKLLRLYA+ G ME AHQVFD+M +RN AF WNSLISGYAEL
Sbjct: 361 IHRLVPQNLLRKNTGISSKLLRLYATAGRMESAHQVFDQMSKRNEYAFPWNSLISGYAEL 420
Query: 468 GLYEDALALYFQMEEEGVEPDHFTFPRVLKACGGIGSIRVGEAVHRHIVRSGFAGDIFVL 527
G YEDALALYFQMEEEGVEPD FTFPR LKAC GIGSI VG+AVHR +VR GF D+FVL
Sbjct: 421 GQYEDALALYFQMEEEGVEPDRFTFPRALKACAGIGSIHVGQAVHRDVVRKGFGNDLFVL 480
Query: 528 NALVDMYAKCGDIMRARKVFDQIIHKDTVSWNSMLTGYTRHGLLLEALNTFDQMIQEGYE 587
NAL+DMYAKCGDI++AR+VFD I KD +SWNSMLTGY R GLL AL F MIQEG+E
Sbjct: 481 NALIDMYAKCGDIVKARRVFDSIACKDNISWNSMLTGYIRQGLLAGALQVFRGMIQEGFE 540
Query: 588 PDSVALSTMISNITSSKFKLHIHGWAIRHGIEWNLSIANSLIAMYANSGKINRARWLFEQ 647
PDSV +ST++S+ S K IHGW +R GIEWN S+ N++I +Y+N GK++ A WLF++
Sbjct: 541 PDSVTISTILSSFCSLKTAAQIHGWVLRRGIEWNTSVVNAMIVVYSNLGKLDGASWLFQR 600
Query: 648 MPQRDIVSWNTIISAHSNTSKALTYFEVMESLGVLPDSVTFVSLLSTCAHLSLVKEGGKL 707
MP+RDIVSWN+IIS HS AL YFE M PDS+TFV++LS CAHL LVK+G +L
Sbjct: 601 MPERDIVSWNSIISGHSKNPDALLYFEQMVRSCTSPDSITFVAILSACAHLGLVKDGERL 660
Query: 708 YSVMKGKYGIRPTIEHYACMVNLYGRAGLIEEAYRIIMNGMEVEAGPTVWGALLYACYLH 767
+ +M+ KYGI P +EHYACM+NLYGRAGLI+EA+ +I+ ME EAGPTVWGA+LYAC +H
Sbjct: 661 FWLMRKKYGIDPRMEHYACMINLYGRAGLIDEAFNMIVERMEFEAGPTVWGAMLYACSVH 720
Query: 768 GNVDIAEVAAEKLFESEPDNELNFKLLMKIYGNAGRIEDEKRVRLMMAERGL 788
GN+ I E+A +KLFE EPDN+ NF+LLMKIY NAGR+ED +RVR +M +RGL
Sbjct: 721 GNIQIGEIAGQKLFELEPDNQHNFELLMKIYSNAGRVEDAERVRKLMLDRGL 770
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP337_ARATH | 4.0e-179 | 59.41 | Pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Arabidop... | [more] |
| KCY_PRUAR | 1.9e-80 | 71.50 | UMP-CMP kinase OS=Prunus armeniaca PE=2 SV=1 | [more] |
| PP320_ARATH | 9.6e-80 | 36.30 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
| PPR21_ARATH | 3.4e-77 | 34.68 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
| PPR14_ARATH | 1.1e-75 | 38.11 | Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A061FZF0_THECC | 6.1e-291 | 64.57 | Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0149... | [more] |
| A0A0A0L5M0_CUCSA | 3.0e-258 | 83.14 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G176270 PE=4 SV=1 | [more] |
| D7MG22_ARALL | 1.8e-255 | 58.92 | Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA... | [more] |
| A0A0B2RKP9_GLYSO | 2.2e-224 | 57.90 | Pentatricopeptide repeat-containing protein, chloroplastic OS=Glycine soja GN=gl... | [more] |
| M5XGA4_PRUPE | 2.7e-206 | 68.49 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019039mg PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G25270.1 | 2.3e-180 | 59.41 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G18750.1 | 5.4e-81 | 36.30 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G08070.1 | 1.9e-78 | 34.68 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G06140.1 | 6.2e-77 | 38.11 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G08820.1 | 8.1e-77 | 34.68 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
